mRNA_L-elsbetiae_contig13975.2974.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: D7FNJ0_ECTSI (SASA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ0_ECTSI) HSP 1 Score: 340 bits (871), Expect = 7.100e-115 Identity = 178/261 (68.20%), Postives = 203/261 (77.78%), Query Frame = 1 Query: 10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGNDQ 792 VSA AKR VAGSDV++LMGQSNMSGRGQGYD IDGPN+PRI+QWSRANT+ITA EHLQH D + +++ VGMGTAFGRAY ETLPA R+VLLV T +GGT LVNGPWSPGG LFEDAV R EAALAS G A GNCVAAVLWHQGESDA V + Y+ WT+MI LRSR+PAAAEAPV+LG F W+ N + P+L AIRA+PDSV F+ VA +D LS N G +HF AA QRE+GQRYFDKLGDA+ N Q Sbjct: 22 VSADYTAKRKVAGSDVILLMGQSNMSGRGQGYDANIDGPNDPRIQQWSRANTVITASEHLQHADFAIVEETR-VGMGTAFGRAYVETLPAKRNVLLVSTGYGGTRLVNGPWSPGGRLFEDAVRRTEAALASNG--ATGNCVAAVLWHQGESDAIAGVDQETYQFTWTDMINTLRSRIPAAAEAPVILGEFTPAWIAGNRALSEPILSAIRAIPDSVPFTVVAPSDGLSSNFGDPVHFTAAAQREYGQRYFDKLGDAVRNSQ 279
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: D7FNI7_ECTSI (SASA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI7_ECTSI) HSP 1 Score: 337 bits (864), Expect = 1.080e-113 Identity = 176/262 (67.18%), Postives = 203/262 (77.48%), Query Frame = 1 Query: 1 TTPVSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGN 786 +T VSA C AKRDVAGSDVV+LMGQSNMSG G+GYD IDGPN+PRI+QWSR NT+ITA E LQH D G GK + VGMGTAFGRA+ +TLPA+R+VLLVPTA G T LVNGPWSPGG LFEDAV R EAALAS G A GNCVAA+LWHQGESDA + + Y+S WT MI LRSR+PAAAEAPV+LG F + N + P++ AIRA+PDSV F+AVA +D LS N +HFDA GQRE+GQRYFDKL DA+ N Sbjct: 23 STSVSADCTAKRDVAGSDVVLLMGQSNMSGWGEGYDADIDGPNDPRIQQWSRDNTVITASERLQHADHGRAGKRR-VGMGTAFGRAFVKTLPANRNVLLVPTAFGATRLVNGPWSPGGNLFEDAVTRMEAALASNG--AAGNCVAAILWHQGESDAGDGIDQETYQSIWTNMINTLRSRIPAAAEAPVILGEFTPHMLARNRALSEPIIAAIRAIPDSVPFTAVAPSDGLSTNSVGPVHFDAVGQREYGQRYFDKLDDAVRN 281
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: D7FNI9_ECTSI (SASA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNI9_ECTSI) HSP 1 Score: 336 bits (861), Expect = 1.910e-113 Identity = 175/259 (67.57%), Postives = 205/259 (79.15%), Query Frame = 1 Query: 10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGN 786 VSA CAAKR+VAGSDVV+LMGQSNMSG G+GYD IDGP++PRI+QWSRANT+ITA E LQH D + +++ VGMGTAFGRAY +TLPA+R+VLLVPTA G T LVNGPWSPGG LFEDAV R EAALAS G A GNCVAAVLWHQGE DA + + Y+S WT+MI LRSR+PAAAEAPV+LG F + N + P++ AIRA+PDSV F+AVA +D LS N G +HFDAA QRE+GQRYFDKLGDA+ N Sbjct: 16 VSADCAAKRNVAGSDVVLLMGQSNMSGWGEGYDADIDGPDDPRIQQWSRANTVITASERLQHADFDRIDQTR-VGMGTAFGRAYVKTLPANRNVLLVPTAFGATRLVNGPWSPGGNLFEDAVTRMEAALASNG--AVGNCVAAVLWHQGEGDAAGRIDQETYQSTWTDMINTLRSRIPAAAEAPVILGEFTPHMLARNRALSEPIIAAIRAIPDSVPFTAVAPSDGLSSNFGDPVHFDAAAQREYGQRYFDKLGDAVRN 271
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A6H5JM94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM94_9PHAE) HSP 1 Score: 340 bits (871), Expect = 6.420e-106 Identity = 178/261 (68.20%), Postives = 201/261 (77.01%), Query Frame = 1 Query: 10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGNDQ 792 VSA AKR VAGSDV++LMGQSNMSGRGQGYD IDGPN+PRI+QWSRANT+ITA EHLQH D + +++ VGMGTAFGRAY ETLPA R+VLLV T +GGT LVNGPWSPGG LFEDAV R EAALAS G A GNCVAAVLWHQGESDA V + Y+S WT MI LRSR+PAAAEAPV+LG F W + P+L AIRA+PDSV F+ VA +D LS N +HFDA GQRE+GQRYFDKLGDA+ N Q Sbjct: 832 VSADYTAKRKVAGSDVILLMGQSNMSGRGQGYDANIDGPNDPRIQQWSRANTVITASEHLQHADFDVVEETR-VGMGTAFGRAYVETLPAKRNVLLVSTGYGGTRLVNGPWSPGGRLFEDAVRRTEAALASNG--ATGNCVAAVLWHQGESDAVAGVDQETYQSTWTNMINTLRSRIPAAAEAPVILGEFTPAWTAEDRARAEPILSAIRAIPDSVPFTVVAPSDGLSSNVDDPVHFDAVGQREYGQRYFDKLGDAVRNSQ 1089
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A0K8P381_IDESA (Acetylxylan esterase related enzyme n=1 Tax=Ideonella sakaiensis (strain NBRC 110686 / TISTR 2288 / 201-F6) TaxID=1547922 RepID=A0A0K8P381_IDESA) HSP 1 Score: 172 bits (436), Expect = 9.330e-49 Identity = 114/272 (41.91%), Postives = 153/272 (56.25%), Query Frame = 1 Query: 10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQ----GYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDG-GLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAA---AEAPVVLGGFAQPWVESNPEM-VGPVLGAIRALPDSVKFSAVAAADDLSVNPGQ----TIHFDAAGQREFGQRYFDKLGDAIGN 786 +SA C KR VAG DVV+L+GQSNMSG G G+D +PRI+QW+ A + A + LQH D +G+ +G G +F RAY LP R VLLVP A+ GTA N W+PG LFE AV R AALAS G GNC+AA+LW QGESD G Y++A MIG LR+R+ A A P +LG F+ W+ P +L I P ++++AV + L+ N Q +H DA+ R +G+R+++ L A+ N Sbjct: 46 ISAACTDKRGVAGYDVVLLIGQSNMSGYGAYIVPGFDTT-----DPRIQQWTMAGGMALASDPLQHPDAPFNVGR---IGPGMSFARAYLAALPTARKVLLVPAAYNGTAFSNRRWNPGDDLFEAAVTRLNAALASDG----GNCLAAILWSQGESDVDTMTGAQ-YQAALDTMIGTLRTRIAAGQGGATVPFLLGQFSPDWIAPAPTPGQQAILDVINGTPGRLRYTAVVSTAGLTSNLTQGLNGAVHLDASSHRIYGRRFYEALPVALAN 304
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A0K1PM06_9DELT (Phage protein n=2 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1PM06_9DELT) HSP 1 Score: 169 bits (428), Expect = 5.050e-48 Identity = 111/263 (42.21%), Postives = 144/263 (54.75%), Query Frame = 1 Query: 10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANT---IITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAE-TLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGN 786 + A AA +G DV +L GQSNM GRG +D A+D P+ P I QW R I+ A L H+D L + VGMG +F +AY E + P R +LLVPTA GG++ W+PG LFEDAV R AA+A+ GN A LWHQGE+D ++ Y A MIGA R+RV A+ AP +LG F W +P + AI A P V F++VA + L+ N G +HFDA QR +G RY+ L A N Sbjct: 12 LDADVAAPSPSSGYDVFLLAGQSNMVGRGASFDAALDTPH-PAIFQWGRGERDGMIVPAVARLDHNDTALLDR---VGMGLSFAKAYYEASQPTPRPILLVPTARGGSSFSAHQWNPGDPLFEDAVLRGNAAMATD----PGNRFVAFLWHQGENDVGQYDNAT-YSQALDAMIGAFRARVAGASSAPFILGQFCPDW-SPDPAAKASISSAIDATPQRVPFTSVAPSAGLTSNAGDAVHFDAPAQRTYGARYWQALDVARAN 264
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A2E9BQB5_9BURK (Fibronectin type-III domain-containing protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A2E9BQB5_9BURK) HSP 1 Score: 148 bits (373), Expect = 2.850e-37 Identity = 104/261 (39.85%), Postives = 136/261 (52.11%), Query Frame = 1 Query: 46 GSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQ---WS-RANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDA-YRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPW--VESNPEMVGP-------VLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGN 786 G DV +L GQSNM G + +D +D P+ PRI Q W+ N +I A + L H + VG+ F RAY LP R +LLVP+A GGT W+PG LFE AV RA AA+A+ + N A +LWHQGE D + A Y +A I R+R+ AA AP++LG F W V++ G ++ AI V F+AVA++ L PG IHF AAGQRE G RYF +L A+ N Sbjct: 31 GFDVFLLAGQSNMVGWDKNFDPVLDAPD-PRILQLGFWNDHRNFVIPAIDPLDHPQ-----RDNGVGLAMQFSRAYLNDLPKGRGILLVPSAFGGTGFYQQRWNPGNDLFEQAVERANAAMATHPN----NRFAGILWHQGEDDVRFWGSQPARYAAALDAAIYGFRARIAGAASAPMILGKFTDSWGLVDTTFNAAGETTAAKANIMQAIDETTQRVPFTAVASSTGLPSPPGDPIHFSAAGQREHGLRYFAQLPHALAN 281
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A7W5EAM4_9BURK (SASA domain-containing protein n=1 Tax=Massilia umbonata TaxID=864828 RepID=A0A7W5EAM4_9BURK) HSP 1 Score: 134 bits (337), Expect = 2.990e-34 Identity = 95/246 (38.62%), Postives = 130/246 (52.85%), Query Frame = 1 Query: 46 GSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQW-SRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVN--GPWSPGGF----LFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEA-PVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVN-PGQTIHFDAAGQREFGQRY 756 G DVV+L GQSNMSGRG G D D P + R+ W +RANT+ A + L H D G + +G G +FG AY A R ++LVP A+GGT + G W G L +AVARA AA+ + A+LWHQGE+D + +AY + + G LRS + A + P ++G + ++ +P + + G R LP ++ SA + LS N P TIHFDAA QR G RY Sbjct: 17 GYDVVLLAGQSNMSGRGLGADPMADTPADARLLAWDARANTLRLARDPLPHQDLGE--RPVRIGPGISFGHAYLARGGAGRQLVLVPAAYGGTGFTDKAGSWRVTGAAVSPLVTEAVARANAAMRAAHARGAPARFVAILWHQGETDGGTRMAPEAYAAELVALAGYLRSHIDGAGPSTPFIVGQYVPAFLAGSPSLQR-IAGINRNLPATLARSACVGSAGLSGNGPSDTIHFDAASQRVLGGRY 259
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A411X0E2_9BURK (SASA domain-containing protein n=2 Tax=Massilia albidiflava TaxID=321983 RepID=A0A411X0E2_9BURK) HSP 1 Score: 125 bits (315), Expect = 1.510e-30 Identity = 90/246 (36.59%), Postives = 130/246 (52.85%), Query Frame = 1 Query: 46 GSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQW-SRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVN--GPWSPGGF----LFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEA-PVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQ-TIHFDAAGQREFGQRY 756 G DVV+L GQSNMSGRG G D D P +PR+ W +RANT+ A + L H D G + +G G +FG+AY A R ++LV A+GGT + G W G L +AVARA AA+ + AA+LWHQGE+D + +AY + + LRS + A + P ++G + + ++ + + R LP ++ SA + LS N + +HFDAA QR+ G+RY Sbjct: 64 GYDVVLLAGQSNMSGRGLGTDPMADTPADPRLLAWDARANTLRLARDPLPHQDRGE--RPVRIGPGISFGQAYLARGSAGRQLVLVAAAYGGTGFSDNAGSWRVTGAAVSPLAAEAVARANAAMRAARARGAPARFAAILWHQGETDGGNRMAPEAYAAELVALATYLRSHIDGAGPSTPFIVGQYVPAHLAAD-RFLQRIADVNRELPATLAHSACVGSHGLSGNSTRDAVHFDAASQRDMGRRY 306
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: N1V2P2_9MICC (SASA domain-containing protein (Fragment) n=1 Tax=Arthrobacter crystallopoietes BAB-32 TaxID=1246476 RepID=N1V2P2_9MICC) HSP 1 Score: 117 bits (293), Expect = 1.610e-27 Identity = 88/251 (35.06%), Postives = 120/251 (47.81%), Query Frame = 1 Query: 43 AGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWS----RANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGP---WSPGGF-----LFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYF 759 AGSDVV+L+GQSNM G G YD +D I Q++ A ++ AE+ L H + VG G F R + PA R VLLVP A GGT+ G W P L A++ + ALA + +AA+LWHQGESDA YR+ ++I LR+ + P ++GG WV + ++ GP RA+P +A + PG IH+ AAG RE G RY+ Sbjct: 69 AGSDVVLLLGQSNMQGAGTPYDPGLD-IRMDGIDQFAGSGPHAGKVLPAEDPLHHVTTYLFNGAASVGPGMEFARQFWLRQPADRRVLLVPAARGGTSFAGGADYSWDPDNTTARVNLAHRAISECKTALALNPNHR----LAAILWHQGESDALPGKSARWYRNKLLQLIDLLRAEF---GQVPFLVGGMVPEWVAWDRKLRGPFDAVHRAIPKDRPLTAFVEGPAGAGLPGDIIHYSAAGARELGLRYY 311 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13975.2974.1 >prot_L-elsbetiae_contig13975.2974.1 ID=prot_L-elsbetiae_contig13975.2974.1|Name=mRNA_L-elsbetiae_contig13975.2974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=264bp TTPVSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWback to top mRNA from alignment at L-elsbetiae_contig13975:2569..4106+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13975.2974.1 ID=mRNA_L-elsbetiae_contig13975.2974.1|Name=mRNA_L-elsbetiae_contig13975.2974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1538bp|location=Sequence derived from alignment at L-elsbetiae_contig13975:2569..4106+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13975:2569..4106+ >mRNA_L-elsbetiae_contig13975.2974.1 ID=mRNA_L-elsbetiae_contig13975.2974.1|Name=mRNA_L-elsbetiae_contig13975.2974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1584bp|location=Sequence derived from alignment at L-elsbetiae_contig13975:2569..4106+ (Laminarionema elsbetiae ELsaHSoW15)back to top |