mRNA_L-elsbetiae_contig13916.2946.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13916.2946.1
Unique NamemRNA_L-elsbetiae_contig13916.2946.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: D7FNX7_ECTSI (TatD DNase domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX7_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 8.040e-116
Identity = 174/224 (77.68%), Postives = 195/224 (87.05%), Query Frame = 3
Query:    3 VIELCTRINGDTSRHGRLRVHPAIGMHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPRAFN 674
            V+ELC  IN D SR  +LR+HP+IGMHPEKADL  +D VL LIDKHADTIVCVGEVGLDFSRHLIGE+GGE AERAKEVQREVFRRQARRA+E GLAVNVHSRSAGHHAISLL+EEGITRAVLHAFDGKPKYAV+AAKAGY FSVPPIVCRSPGFQ+LV+A+PLESL+LETDSPAL P K  +N P N++++ DWIA+LK VP   V     ANA+RLFPRAF+
Sbjct:   45 VVELCASINDDASRCRKLRLHPSIGMHPEKADLHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSISRDWIASLKGVPADVVAETTTANARRLFPRAFD 268          
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A6H5KIS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS3_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 1.030e-106
Identity = 173/252 (68.65%), Postives = 193/252 (76.59%), Query Frame = 3
Query:    3 VIELCTRINGDTSRHGRLRVHPAIGMHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPK----------------------------YAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPRAFN 674
            V+ELC  IN D SR  +LR+HP+IGMHPEKAD+  +D VL LIDKHADTIVCVGEVGLDFSRHLIGE+GGE AERAKEVQREVFRRQARRA+E GLAVNVHSRSAGHHAISLL+EEGITRAVLHAFDGKPK                            YAV+AAKAGY FSVPPIVCRS GFQ+LV+A+PLESL+LETDSPAL P K   N P N++V+ DWIA+LK VP   V     ANA+RLFPRAF+
Sbjct:   90 VVELCASINDDASRCRKLRLHPSIGMHPEKADVHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKDNGLITAEIQQTFRVQEYLATAGGEKERYAVQAAKAGYFFSVPPIVCRSSGFQSLVKALPLESLVLETDSPALGPEKGVGNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRAFD 341          
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A7S2UWP9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.470e-57
Identity = 107/207 (51.69%), Postives = 142/207 (68.60%), Query Frame = 3
Query:   60 VHPAIGMHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEA-AKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLF--PRAF 671
            V P++G+HPE A++  L +++  I ++ D +  VGEVGLD+S H++GE    EAE  K +QREVF +Q  +A E  L +NVHSR+AGHH + LLRE G TR V+HAFDG+  YA  A +++GY FSVPP + RSP  Q LVR +PL+ LLLE+DSPALAPVK  +N P NI V+C+ IA +K V V EV  +  ANA +L   P  F
Sbjct:   70 VIPSVGLHPEFANISDLPTIITQITQYHDQLASVGEVGLDYSPHILGEG---EAEERKAIQREVFSQQVLKAVELDLPLNVHSRAAGHHTLDLLRELGATRVVMHAFDGRAHYAERAVSESGYYFSVPPCIVRSPQLQKLVRRLPLDHLLLESDSPALAPVKGERNCPSNIIVSCEEIAKIKQVSVQEVAAITYANAMKLLNIPETF 273          
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: UPI0018653474 (tatD DNase domain containing 3-like isoform X1 n=2 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018653474)

HSP 1 Score: 195 bits (495), Expect = 6.290e-57
Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 3
Query:   54 LRVHPAIGMHPEK---ADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665
            L VHP  G+ PE    A L+ LD+ L LI+KH D ++ +GEVGLDF+   +       +++ KE QREV  RQA  A+   L +NVHSRSAG   I LL+E+G+ +A+LHAFDGKP  A+E  KAGY FS+PP + RS   Q LV+ +PLES+ LETDSPAL P K  +NEP+NITV+ ++IA +K VP+ +V  V   NA RLFP+
Sbjct:   63 LGVHPVQGVPPEPQRGATLEDLDAALPLIEKHKDRLLAIGEVGLDFTPRFLS------SDKGKEEQREVLIRQAEIAKRLDLPLNVHSRSAGRPTIHLLKEQGVEKALLHAFDGKPSVAIEGVKAGYYFSIPPSIVRSEQKQKLVKQLPLESICLETDSPALGPEKQVRNEPRNITVSAEFIAKVKGVPLEQVIEVTTRNALRLFPK 263          
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: UPI0018863194 (tatD DNase domain containing 3-like isoform X1 n=4 Tax=Syngnathidae TaxID=72045 RepID=UPI0018863194)

HSP 1 Score: 192 bits (488), Expect = 7.000e-56
Identity = 107/211 (50.71%), Postives = 138/211 (65.40%), Query Frame = 3
Query:   60 VHPAIGMHP---------EKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665
            V P +G+HP           A L  LD+ L LIDK+ D +V +GEVGLDF+   +      ++E  KE QREV  RQAR A+E  L +NVHSRSAG   I LL+E+G+ + +LHAFDGKP  A+E  KAGY FS+PP + RS   Q LV+ +PLE++ LETDSPAL P K  +NEPKNI VA ++I+ +K V V EV +V   NA RLFP+
Sbjct:   59 VLPCLGVHPVQEVSSDQHRSASLQDLDAALPLIDKYKDQLVAIGEVGLDFTPRYV------KSESDKESQREVLIRQARLAKELDLPLNVHSRSAGRPTIQLLKEQGVEKVLLHAFDGKPSVAMEGVKAGYFFSIPPSIVRSEQKQKLVKQLPLENMCLETDSPALGPEKQVRNEPKNIIVAAEYISVVKGVSVEEVMQVTTRNAFRLFPK 263          
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: UPI001EEA432E (tatD DNase domain containing 3-like isoform X1 n=3 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEA432E)

HSP 1 Score: 188 bits (478), Expect = 4.240e-54
Identity = 102/208 (49.04%), Postives = 137/208 (65.87%), Query Frame = 3
Query:   66 PAIGMHPEKAD--------LDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665
            P +G+HP + D        L+ LDS L LI+K+ + IV +GEVGLDF+  ++    G      KE+QR+V  RQ   A++  L +NVHSRSAG   I LL+E G+  A+LHAFDGKP  A+E  +AGY FS+PP + RS   Q LV+ +PLE++ LETDSPAL P K  +NEPKNIT++ ++IA +K VPV +V  V   NA RLFP+
Sbjct:   84 PCLGVHPVQEDPAQSRGALLEDLDSALPLIEKYKEHIVAIGEVGLDFTPRIVSTDAG------KELQRQVLIRQVEIAKQLNLPLNVHSRSAGRPTIHLLKELGVENALLHAFDGKPSVAMEGVRAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNITISAEYIAKIKGVPVEKVIEVTTLNALRLFPK 285          
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A4W6FQA4_LATCA (TatD DNase domain containing 3 n=46 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4W6FQA4_LATCA)

HSP 1 Score: 187 bits (475), Expect = 6.130e-54
Identity = 102/207 (49.28%), Postives = 138/207 (66.67%), Query Frame = 3
Query:   54 LRVHPAIGMHPEK---ADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665
            L VHP   + PE+   A L  LD+ L +I+K+ D +V +GEVGLDF+   +        +  KE QR+V  RQA+ A+E  L +NVHSRSAG   I LL+E+G+ RA+LHAFDGKP  A+E  KAGY FS+PP + RS   Q LV+ +PLE++ LETDSPAL P K  +NEPKNI+++ ++I+ +K V + EV  V   NA RLFP+
Sbjct:   63 LGVHPVQSVSPEQQRGASLQDLDAALPIIEKYKDHLVAIGEVGLDFTPRFVSN------DTDKESQRQVLIRQAQIAKELDLPLNVHSRSAGRPTIHLLKEQGVERALLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNISISAEYISKIKGVSLEEVMEVTTQNALRLFPK 263          
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A4W6FQ99_LATCA (TatD DNase domain containing 3 n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6FQ99_LATCA)

HSP 1 Score: 187 bits (475), Expect = 6.690e-54
Identity = 102/207 (49.28%), Postives = 138/207 (66.67%), Query Frame = 3
Query:   54 LRVHPAIGMHPEK---ADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665
            L VHP   + PE+   A L  LD+ L +I+K+ D +V +GEVGLDF+   +        +  KE QR+V  RQA+ A+E  L +NVHSRSAG   I LL+E+G+ RA+LHAFDGKP  A+E  KAGY FS+PP + RS   Q LV+ +PLE++ LETDSPAL P K  +NEPKNI+++ ++I+ +K V + EV  V   NA RLFP+
Sbjct:   66 LGVHPVQSVSPEQQRGASLQDLDAALPIIEKYKDHLVAIGEVGLDFTPRFVSN------DTDKESQRQVLIRQAQIAKELDLPLNVHSRSAGRPTIHLLKEQGVERALLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNISISAEYISKIKGVSLEEVMEVTTQNALRLFPK 266          
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A0L0G503_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G503_9EUKA)

HSP 1 Score: 185 bits (470), Expect = 7.880e-54
Identity = 100/205 (48.78%), Postives = 133/205 (64.88%), Query Frame = 3
Query:   60 VHPAIGMHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKA-GYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPRAF 671
            V   IG+HP +A+L+ L  VL LI K+A  +V +GE GLDF+  ++G  G    ++ K++QR VF  QA  + E  L +NVHSR AGHHAISLL+E G+ R VLHAFDGKPKYA +AA++ GY FS+PP   RSP  + L+  +PL SLL+ETDSPAL P    +N P N  +AC  I+ +K +   EV      NA +LF  +F
Sbjct:   21 VKACIGLHPTEANLEILPDVLALIRKNAHDLVGIGECGLDFTPKVLGNDG----DKVKQIQRHVFAAQAALSVELDLPLNVHSRCAGHHAISLLKEAGVKRCVLHAFDGKPKYARQAAESMGYFFSIPPSAVRSPEKRKLISQLPLSSLLIETDSPALGPTSKDRNVPSNAVIACQVISEVKGISAEEVAHTTTENATKLFKLSF 221          
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A8D0D370_SANLU (Putative deoxyribonuclease TATDN3 n=7 Tax=Eupercaria TaxID=1489922 RepID=A0A8D0D370_SANLU)

HSP 1 Score: 186 bits (473), Expect = 1.250e-53
Identity = 104/208 (50.00%), Postives = 141/208 (67.79%), Query Frame = 3
Query:   54 LRVHPAIGMHPEK---ADLDALDSVLRLIDKHADTIVCVGEVGLDFS-RHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665
            L VHP   + PE+   A L  LD+ L +I+K+ D +V +GEVGLDF+ R++ GE+        KE QR+V  RQA+ A+E  L +NVHSRSAG   I LL+E+G+ +A+LHAFDGKP  A+E  KAGY FS+PP + RS   Q LV+ +PLE++ LETDSPAL P K  +NEPKNI ++ ++I+ +K V + EV  V   NA RLFP+
Sbjct:   64 LGVHPVQEVSPEQQRGASLQDLDAALPIIEKYKDHLVAIGEVGLDFTPRYVRGESD-------KESQRQVLIRQAQIAKELDLPLNVHSRSAGRPTIHLLKEQGVEKALLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNICISAEYISKIKGVSLQEVMEVTTQNALRLFPK 264          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNX7_ECTSI8.040e-11677.68TatD DNase domain containing 3 n=1 Tax=Ectocarpus ... [more]
A0A6H5KIS3_9PHAE1.030e-10668.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UWP9_9STRA1.470e-5751.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI00186534746.290e-5751.21tatD DNase domain containing 3-like isoform X1 n=2... [more]
UPI00188631947.000e-5650.71tatD DNase domain containing 3-like isoform X1 n=4... [more]
UPI001EEA432E4.240e-5449.04tatD DNase domain containing 3-like isoform X1 n=3... [more]
A0A4W6FQA4_LATCA6.130e-5449.28TatD DNase domain containing 3 n=46 Tax=Percomorph... [more]
A0A4W6FQ99_LATCA6.690e-5449.28TatD DNase domain containing 3 n=1 Tax=Lates calca... [more]
A0A0L0G503_9EUKA7.880e-5448.78Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A8D0D370_SANLU1.250e-5350.00Putative deoxyribonuclease TATDN3 n=7 Tax=Eupercar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13916contigL-elsbetiae_contig13916:2019..4270 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.0
Seed ortholog evalue6.3e-84
Seed eggNOG ortholog2880.D7FNX7
Preferred nameTATDN3
KEGG koko:K03424
Hectar predicted targeting categoryother localisation
EggNOG free text desc.hydrolase activity, acting on ester bonds
EggNOG OGsCOG0084@1,KOG3020@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Ec32 ortholog descriptionTatD family
Ec32 orthologEc-10_004740.1
Exons4
Model size1040
Cds size606
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13916.2946.1prot_L-elsbetiae_contig13916.2946.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13916 2096..3913 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815547.546944-UTR-L-elsbetiae_contig13916:2018..20951622815547.546944-UTR-L-elsbetiae_contig13916:2018..2095Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13916 2019..2095 +
1691682952.3874724-UTR-L-elsbetiae_contig13916:2018..20951691682952.3874724-UTR-L-elsbetiae_contig13916:2018..2095Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13916 2019..2095 +
1622815547.6072853-UTR-L-elsbetiae_contig13916:3913..42701622815547.6072853-UTR-L-elsbetiae_contig13916:3913..4270Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13916 3914..4270 +
1691682952.4378622-UTR-L-elsbetiae_contig13916:3913..42701691682952.4378622-UTR-L-elsbetiae_contig13916:3913..4270Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13916 3914..4270 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815547.560937-CDS-L-elsbetiae_contig13916:2095..22961622815547.560937-CDS-L-elsbetiae_contig13916:2095..2296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13916 2096..2296 +
1691682952.400016-CDS-L-elsbetiae_contig13916:2095..22961691682952.400016-CDS-L-elsbetiae_contig13916:2095..2296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13916 2096..2296 +
1622815547.5729206-CDS-L-elsbetiae_contig13916:2778..28941622815547.5729206-CDS-L-elsbetiae_contig13916:2778..2894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13916 2779..2894 +
1691682952.4123213-CDS-L-elsbetiae_contig13916:2778..28941691682952.4123213-CDS-L-elsbetiae_contig13916:2778..2894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13916 2779..2894 +
1622815547.5842009-CDS-L-elsbetiae_contig13916:3324..34601622815547.5842009-CDS-L-elsbetiae_contig13916:3324..3460Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13916 3325..3460 +
1691682952.4206471-CDS-L-elsbetiae_contig13916:3324..34601691682952.4206471-CDS-L-elsbetiae_contig13916:3324..3460Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13916 3325..3460 +
1622815547.5948424-CDS-L-elsbetiae_contig13916:3760..39131622815547.5948424-CDS-L-elsbetiae_contig13916:3760..3913Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13916 3761..3913 +
1691682952.428912-CDS-L-elsbetiae_contig13916:3760..39131691682952.428912-CDS-L-elsbetiae_contig13916:3760..3913Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13916 3761..3913 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13916.2946.1

>prot_L-elsbetiae_contig13916.2946.1 ID=prot_L-elsbetiae_contig13916.2946.1|Name=mRNA_L-elsbetiae_contig13916.2946.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAER
AKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHA
FDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPA
LAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPRAFNS
G*
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mRNA from alignment at L-elsbetiae_contig13916:2019..4270+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13916.2946.1 ID=mRNA_L-elsbetiae_contig13916.2946.1|Name=mRNA_L-elsbetiae_contig13916.2946.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2252bp|location=Sequence derived from alignment at L-elsbetiae_contig13916:2019..4270+ (Laminarionema elsbetiae ELsaHSoW15)
AGGTCATTGAATTGTGCACCCGTATCAACGGCGACACCTCTCGGCACGGG CGGCTCCGGGTGCACCCCGCCATCGGCATGCACCCCGAGAAAGCAGATCT CGACGCCCTCGACAGCGTGCTCAGACTCATCGACAAGCACGCTGACACCA TAGTCTGCGTCGGAGAGGTGGGCCTCGACTTCAGCAGACACTTGATCGGA GAGGCAGGCGGGGAGGAGGCGGAGCGGGCCAAGGAGGTTCAGAGGGAGGT CTTCAGAAGGCAGGCTCGCCGTGCGGAGGTGAGATGAAGACCAGATGCAG TCACGCCTCTTGAGAGGAGGCAATAACTGCTTGCATTCACTCCCCCCCCC CGCGAAAGGCATTGGCATCAGGGAAGGAAGGAAGGAAGGATGGCCGAGGG GCGAATGGATGATGCGCGCGCTGTGTCTTTGTTCCGAGCCGTCGTTGATT TTGATTCGAAGCGCCGGGACTCCAAATTCGTGTACATACGTAGATACCAT GTAAATAGTAGAAGTGCGAGGGCTCTACCCCCTCTGGCTCACCGTCATGT TTGCATGTATGTATGGATGTACATACGTCTTTTTTTTATTTCAGGGGCCA GTGCACCTACTTGTTTCTTTCTCCCATCACCTCCGCACTAAAAAAAAACA AAAACAATCACCTCCGCACTGCATACATCAAAATACAAAATACCCCTTTT TTTTGTGATGCCTTATCATATCCCGCCTCCCTGGTGCTCGCTTGCCGCCG TCGATTTCAGGAGCATGGCCTGGCCGTCAACGTGCACAGCCGCTCCGCAG GGCACCACGCCATCTCCCTCCTGAGAGAGGAGGGCATCACGCGCGCTGTC CTCCACGCCTTCGACGGCAAGCCCAAGTGAGACCCTTCACAGTCAGGCCA TCGTATAGAAGCAACCGAACACGTACATATGACATTTGCGTCAGAAAGTT CGTTCGGGGGTGGTGGGTGGGTGGGTGCGGGGGAAGCCATAGCAGTACGT TGCTCCATCAGGTCAATGTCCGAAGCTCCAGCTAGTGGTAACAGATGAAA AACGGTGCGGTTGAGGACAACGGAGCGACGAGTGCGGCATCTGGCTGCTT TGTGCAAACTACATTGATCCATTGTTATCAGGCTCGCTCGTGTTTGTGCC CTGCCGGCCTTTAGGCTACTTTTGTGCGGGTAACGGACACCTGCTTTTAC TCAGAGATGGTCACACAGCAGCACCCGCCGACTCTGCCCCTTTCTTCCGC TACGCTCCCCTCGTCGCCATTGACGCCACTCTCTTCTCCACGCCCTTCGA GACAAGGTATGCCGTAGAGGCAGCCAAGGCGGGTTACTTGTTCTCTGTCC CGCCGATCGTCTGCCGCTCTCCGGGCTTCCAAGCTCTTGTTAGGGCGGTC CCCTTGGAGTCCCTCCTGTTGGAGACGGACTCGCCCGCCTTGGTGAGGGT AGAGACACTGTTGCTTTGTTTCGAGTGGCCGTTGGAACATCGTTTACGGT TCACTTTGCTCCCCTGCTTCTTGTTTCATCCTTTTTCGCTCAGCAAACAC CGCCCCCTCCCCTGCCCTTGTTGGCGTCCTAGTCGCGGCTTCCGGCAAAA GCCAGCCACTCTCGACCCGGCAGCACCCTCGAAGTCAGCCACACACCCAC CGTGCATGGTAGAATGTCAATATCAAACCCAGGACGTAACTACCCCGACT CCTTCCCTTGTGGTATTGTCTTTGCTCCATGATGCGACGCAGGCTCCGGT CAAGAACACGAAGAACGAGCCGAAAAACATTACCGTTGCGTGCGATTGGA TCGCTACTCTGAAAAATGTTCCGGTCGCAGAGGTTAGGCGGGTTATTGGC GCTAATGCCCAGCGTTTGTTCCCTCGTGCCTTCAATAGCGGGTAGGGGGT AGCGGATAGGTATTGTACATAGATCACGTGTAGCCAAGAACATGTCGTAT CAGGTTTGAGTAAACCTCTTCCCGCCCTTTCAACGGAGTACTAATTTGGT TAAATTTCGAATCCTGGAGTGCGGGTATGTATGTTGTATATGTACTTCGA AGTATGCATCGAGAGAAAGGGGGAAGTAGATAAAGAGAGAAGAGAGCGCG TGGTTGTAAAATGTACAACAGTAGTTGCGTAAACCCTAGCATTTTTGAGT TGTTTTCTGTCGAACAGGGGTTGGGTATTACTGCTGTACGTAGTCCACGC CCGGCAGGAACGGTCGCACCACAATCATATAGCGGGCAAGCTCGCGTCTC AC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13916:2019..4270+

>mRNA_L-elsbetiae_contig13916.2946.1 ID=mRNA_L-elsbetiae_contig13916.2946.1|Name=mRNA_L-elsbetiae_contig13916.2946.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig13916:2019..4270+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCACCCCGAGAAAGCAGATCTCGACGCCCTCGACAGCGTGCTCAGACT
CATCGACAAGCACGCTGACACCATAGTCTGCGTCGGAGAGGTGGGCCTCG
ACTTCAGCAGACACTTGATCGGAGAGGCAGGCGGGGAGGAGGCGGAGCGG
GCCAAGGAGGTTCAGAGGGAGGTCTTCAGAAGGCAGGCTCGCCGTGCGGA
GATGCACCCCGAGAAAGCAGATCTCGACGCCCTCGACAGCGTGCTCAGAC
TCATCGACAAGCACGCTGACACCATAGTCTGCGTCGGAGAGGTGGGCCTC
GACTTCAGCAGACACTTGATCGGAGAGGCAGGCGGGGAGGAGGCGGAGCG
GGCCAAGGAGGTTCAGAGGGAGGTCTTCAGAAGGCAGGCTCGCCGTGCGG
AGGAGCATGGCCTGGCCGTCAACGTGCACAGCCGCTCCGCAGGGCACCAC
GCCATCTCCCTCCTGAGAGAGGAGGGCATCACGCGCGCTGTCCTCCACGC
CTTCGACGGCAAGCCCAAGAGCATGGCCTGGCCGTCAACGTGCACAGCCG
CTCCGCAGGGCACCACGCCATCTCCCTCCTGAGAGAGGAGGGCATCACGC
GCGCTGTCCTCCACGCCTTCGACGGCAAGCCCAAGTATGCCGTAGAGGCA
GCCAAGGCGGGTTACTTGTTCTCTGTCCCGCCGATCGTCTGCCGCTCTCC
GGGCTTCCAAGCTCTTGTTAGGGCGGTCCCCTTGGAGTCCCTCCTGTTGG
AGACGGACTCGCCCGCCTTGGTATGCCGTAGAGGCAGCCAAGGCGGGTTA
CTTGTTCTCTGTCCCGCCGATCGTCTGCCGCTCTCCGGGCTTCCAAGCTC
TTGTTAGGGCGGTCCCCTTGGAGTCCCTCCTGTTGGAGACGGACTCGCCC
GCCTTGGCTCCGGTCAAGAACACGAAGAACGAGCCGAAAAACATTACCGT
TGCGTGCGATTGGATCGCTACTCTGAAAAATGTTCCGGTCGCAGAGGTTA
GGCGGGTTATTGGCGCTAATGCCCAGCGTTTGTTCCCTCGTGCCTTCAAT
AGCGGGTAGGCTCCGGTCAAGAACACGAAGAACGAGCCGAAAAACATTAC
CGTTGCGTGCGATTGGATCGCTACTCTGAAAAATGTTCCGGTCGCAGAGG
TTAGGCGGGTTATTGGCGCTAATGCCCAGCGTTTGTTCCCTCGTGCCTTC
AATAGCGGGTAG
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