mRNA_L-elsbetiae_contig13916.2946.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: D7FNX7_ECTSI (TatD DNase domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX7_ECTSI) HSP 1 Score: 345 bits (885), Expect = 8.040e-116 Identity = 174/224 (77.68%), Postives = 195/224 (87.05%), Query Frame = 3 Query: 3 VIELCTRINGDTSRHGRLRVHPAIGMHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPRAFN 674 V+ELC IN D SR +LR+HP+IGMHPEKADL +D VL LIDKHADTIVCVGEVGLDFSRHLIGE+GGE AERAKEVQREVFRRQARRA+E GLAVNVHSRSAGHHAISLL+EEGITRAVLHAFDGKPKYAV+AAKAGY FSVPPIVCRSPGFQ+LV+A+PLESL+LETDSPAL P K +N P N++++ DWIA+LK VP V ANA+RLFPRAF+ Sbjct: 45 VVELCASINDDASRCRKLRLHPSIGMHPEKADLHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSISRDWIASLKGVPADVVAETTTANARRLFPRAFD 268
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A6H5KIS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS3_9PHAE) HSP 1 Score: 325 bits (832), Expect = 1.030e-106 Identity = 173/252 (68.65%), Postives = 193/252 (76.59%), Query Frame = 3 Query: 3 VIELCTRINGDTSRHGRLRVHPAIGMHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPK----------------------------YAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPRAFN 674 V+ELC IN D SR +LR+HP+IGMHPEKAD+ +D VL LIDKHADTIVCVGEVGLDFSRHLIGE+GGE AERAKEVQREVFRRQARRA+E GLAVNVHSRSAGHHAISLL+EEGITRAVLHAFDGKPK YAV+AAKAGY FSVPPIVCRS GFQ+LV+A+PLESL+LETDSPAL P K N P N++V+ DWIA+LK VP V ANA+RLFPRAF+ Sbjct: 90 VVELCASINDDASRCRKLRLHPSIGMHPEKADVHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKDNGLITAEIQQTFRVQEYLATAGGEKERYAVQAAKAGYFFSVPPIVCRSSGFQSLVKALPLESLVLETDSPALGPEKGVGNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRAFD 341
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A7S2UWP9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP9_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.470e-57 Identity = 107/207 (51.69%), Postives = 142/207 (68.60%), Query Frame = 3 Query: 60 VHPAIGMHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEA-AKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLF--PRAF 671 V P++G+HPE A++ L +++ I ++ D + VGEVGLD+S H++GE EAE K +QREVF +Q +A E L +NVHSR+AGHH + LLRE G TR V+HAFDG+ YA A +++GY FSVPP + RSP Q LVR +PL+ LLLE+DSPALAPVK +N P NI V+C+ IA +K V V EV + ANA +L P F Sbjct: 70 VIPSVGLHPEFANISDLPTIITQITQYHDQLASVGEVGLDYSPHILGEG---EAEERKAIQREVFSQQVLKAVELDLPLNVHSRAAGHHTLDLLRELGATRVVMHAFDGRAHYAERAVSESGYYFSVPPCIVRSPQLQKLVRRLPLDHLLLESDSPALAPVKGERNCPSNIIVSCEEIAKIKQVSVQEVAAITYANAMKLLNIPETF 273
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: UPI0018653474 (tatD DNase domain containing 3-like isoform X1 n=2 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018653474) HSP 1 Score: 195 bits (495), Expect = 6.290e-57 Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 3 Query: 54 LRVHPAIGMHPEK---ADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665 L VHP G+ PE A L+ LD+ L LI+KH D ++ +GEVGLDF+ + +++ KE QREV RQA A+ L +NVHSRSAG I LL+E+G+ +A+LHAFDGKP A+E KAGY FS+PP + RS Q LV+ +PLES+ LETDSPAL P K +NEP+NITV+ ++IA +K VP+ +V V NA RLFP+ Sbjct: 63 LGVHPVQGVPPEPQRGATLEDLDAALPLIEKHKDRLLAIGEVGLDFTPRFLS------SDKGKEEQREVLIRQAEIAKRLDLPLNVHSRSAGRPTIHLLKEQGVEKALLHAFDGKPSVAIEGVKAGYYFSIPPSIVRSEQKQKLVKQLPLESICLETDSPALGPEKQVRNEPRNITVSAEFIAKVKGVPLEQVIEVTTRNALRLFPK 263
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: UPI0018863194 (tatD DNase domain containing 3-like isoform X1 n=4 Tax=Syngnathidae TaxID=72045 RepID=UPI0018863194) HSP 1 Score: 192 bits (488), Expect = 7.000e-56 Identity = 107/211 (50.71%), Postives = 138/211 (65.40%), Query Frame = 3 Query: 60 VHPAIGMHP---------EKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665 V P +G+HP A L LD+ L LIDK+ D +V +GEVGLDF+ + ++E KE QREV RQAR A+E L +NVHSRSAG I LL+E+G+ + +LHAFDGKP A+E KAGY FS+PP + RS Q LV+ +PLE++ LETDSPAL P K +NEPKNI VA ++I+ +K V V EV +V NA RLFP+ Sbjct: 59 VLPCLGVHPVQEVSSDQHRSASLQDLDAALPLIDKYKDQLVAIGEVGLDFTPRYV------KSESDKESQREVLIRQARLAKELDLPLNVHSRSAGRPTIQLLKEQGVEKVLLHAFDGKPSVAMEGVKAGYFFSIPPSIVRSEQKQKLVKQLPLENMCLETDSPALGPEKQVRNEPKNIIVAAEYISVVKGVSVEEVMQVTTRNAFRLFPK 263
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: UPI001EEA432E (tatD DNase domain containing 3-like isoform X1 n=3 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEA432E) HSP 1 Score: 188 bits (478), Expect = 4.240e-54 Identity = 102/208 (49.04%), Postives = 137/208 (65.87%), Query Frame = 3 Query: 66 PAIGMHPEKAD--------LDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665 P +G+HP + D L+ LDS L LI+K+ + IV +GEVGLDF+ ++ G KE+QR+V RQ A++ L +NVHSRSAG I LL+E G+ A+LHAFDGKP A+E +AGY FS+PP + RS Q LV+ +PLE++ LETDSPAL P K +NEPKNIT++ ++IA +K VPV +V V NA RLFP+ Sbjct: 84 PCLGVHPVQEDPAQSRGALLEDLDSALPLIEKYKEHIVAIGEVGLDFTPRIVSTDAG------KELQRQVLIRQVEIAKQLNLPLNVHSRSAGRPTIHLLKELGVENALLHAFDGKPSVAMEGVRAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNITISAEYIAKIKGVPVEKVIEVTTLNALRLFPK 285
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A4W6FQA4_LATCA (TatD DNase domain containing 3 n=46 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4W6FQA4_LATCA) HSP 1 Score: 187 bits (475), Expect = 6.130e-54 Identity = 102/207 (49.28%), Postives = 138/207 (66.67%), Query Frame = 3 Query: 54 LRVHPAIGMHPEK---ADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665 L VHP + PE+ A L LD+ L +I+K+ D +V +GEVGLDF+ + + KE QR+V RQA+ A+E L +NVHSRSAG I LL+E+G+ RA+LHAFDGKP A+E KAGY FS+PP + RS Q LV+ +PLE++ LETDSPAL P K +NEPKNI+++ ++I+ +K V + EV V NA RLFP+ Sbjct: 63 LGVHPVQSVSPEQQRGASLQDLDAALPIIEKYKDHLVAIGEVGLDFTPRFVSN------DTDKESQRQVLIRQAQIAKELDLPLNVHSRSAGRPTIHLLKEQGVERALLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNISISAEYISKIKGVSLEEVMEVTTQNALRLFPK 263
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A4W6FQ99_LATCA (TatD DNase domain containing 3 n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6FQ99_LATCA) HSP 1 Score: 187 bits (475), Expect = 6.690e-54 Identity = 102/207 (49.28%), Postives = 138/207 (66.67%), Query Frame = 3 Query: 54 LRVHPAIGMHPEK---ADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665 L VHP + PE+ A L LD+ L +I+K+ D +V +GEVGLDF+ + + KE QR+V RQA+ A+E L +NVHSRSAG I LL+E+G+ RA+LHAFDGKP A+E KAGY FS+PP + RS Q LV+ +PLE++ LETDSPAL P K +NEPKNI+++ ++I+ +K V + EV V NA RLFP+ Sbjct: 66 LGVHPVQSVSPEQQRGASLQDLDAALPIIEKYKDHLVAIGEVGLDFTPRFVSN------DTDKESQRQVLIRQAQIAKELDLPLNVHSRSAGRPTIHLLKEQGVERALLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNISISAEYISKIKGVSLEEVMEVTTQNALRLFPK 266
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A0L0G503_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G503_9EUKA) HSP 1 Score: 185 bits (470), Expect = 7.880e-54 Identity = 100/205 (48.78%), Postives = 133/205 (64.88%), Query Frame = 3 Query: 60 VHPAIGMHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKA-GYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPRAF 671 V IG+HP +A+L+ L VL LI K+A +V +GE GLDF+ ++G G ++ K++QR VF QA + E L +NVHSR AGHHAISLL+E G+ R VLHAFDGKPKYA +AA++ GY FS+PP RSP + L+ +PL SLL+ETDSPAL P +N P N +AC I+ +K + EV NA +LF +F Sbjct: 21 VKACIGLHPTEANLEILPDVLALIRKNAHDLVGIGECGLDFTPKVLGNDG----DKVKQIQRHVFAAQAALSVELDLPLNVHSRCAGHHAISLLKEAGVKRCVLHAFDGKPKYARQAAESMGYFFSIPPSAVRSPEKRKLISQLPLSSLLIETDSPALGPTSKDRNVPSNAVIACQVISEVKGISAEEVAHTTTENATKLFKLSF 221
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Match: A0A8D0D370_SANLU (Putative deoxyribonuclease TATDN3 n=7 Tax=Eupercaria TaxID=1489922 RepID=A0A8D0D370_SANLU) HSP 1 Score: 186 bits (473), Expect = 1.250e-53 Identity = 104/208 (50.00%), Postives = 141/208 (67.79%), Query Frame = 3 Query: 54 LRVHPAIGMHPEK---ADLDALDSVLRLIDKHADTIVCVGEVGLDFS-RHLIGEAGGEEAERAKEVQREVFRRQARRAEEHGLAVNVHSRSAGHHAISLLREEGITRAVLHAFDGKPKYAVEAAKAGYLFSVPPIVCRSPGFQALVRAVPLESLLLETDSPALAPVKNTKNEPKNITVACDWIATLKNVPVAEVRRVIGANAQRLFPR 665 L VHP + PE+ A L LD+ L +I+K+ D +V +GEVGLDF+ R++ GE+ KE QR+V RQA+ A+E L +NVHSRSAG I LL+E+G+ +A+LHAFDGKP A+E KAGY FS+PP + RS Q LV+ +PLE++ LETDSPAL P K +NEPKNI ++ ++I+ +K V + EV V NA RLFP+ Sbjct: 64 LGVHPVQEVSPEQQRGASLQDLDAALPIIEKYKDHLVAIGEVGLDFTPRYVRGESD-------KESQRQVLIRQAQIAKELDLPLNVHSRSAGRPTIHLLKEQGVEKALLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNICISAEYISKIKGVSLQEVMEVTTQNALRLFPK 264 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13916.2946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13916.2946.1 >prot_L-elsbetiae_contig13916.2946.1 ID=prot_L-elsbetiae_contig13916.2946.1|Name=mRNA_L-elsbetiae_contig13916.2946.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MHPEKADLDALDSVLRLIDKHADTIVCVGEVGLDFSRHLIGEAGGEEAERback to top mRNA from alignment at L-elsbetiae_contig13916:2019..4270+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13916.2946.1 ID=mRNA_L-elsbetiae_contig13916.2946.1|Name=mRNA_L-elsbetiae_contig13916.2946.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2252bp|location=Sequence derived from alignment at L-elsbetiae_contig13916:2019..4270+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13916:2019..4270+ >mRNA_L-elsbetiae_contig13916.2946.1 ID=mRNA_L-elsbetiae_contig13916.2946.1|Name=mRNA_L-elsbetiae_contig13916.2946.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig13916:2019..4270+ (Laminarionema elsbetiae ELsaHSoW15)back to top |