mRNA_L-elsbetiae_contig1391.2941.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: D7G0Z4_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z4_ECTSI) HSP 1 Score: 274 bits (701), Expect = 6.510e-88 Identity = 135/193 (69.95%), Postives = 165/193 (85.49%), Query Frame = 1 Query: 1 VEDSGVFRTFSARIPRSSSLSLRGETIANKHIGRLYMAFLNTTSTLDWVKYLVEVEELPVAASSK--GGEEQTVMFQKFKMPWPVKNREVVVQRSVRLDKRSKKMVATLQSTEHPARPIHGAAVRAIVIKTSWVLTSLGGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRETVMGFISSARGYKVHPAMTKW 573 VEDSG FRTFS+R+ SSSL+LRGET ++HIGRLY AFLNTTSTLDWV++LVEVEELP ASS+ G + V+FQK+ MPWPVK+REVV++RSVRLDKR+KKM+A+ QST+HPARPI A VRAIV +TSW+LTSLG SKT+++FE TDPKGSLP+A+VG +Q+ FPRETV GF+SSAR ++HPAMTKW Sbjct: 69 VEDSGGFRTFSSRVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVYRTSWILTSLGSSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVAGFVSSARNVELHPAMTKW 261
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: A0A6H5L2R4_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R4_9PHAE) HSP 1 Score: 176 bits (447), Expect = 9.630e-52 Identity = 83/113 (73.45%), Postives = 101/113 (89.38%), Query Frame = 1 Query: 235 MPWPVKNREVVVQRSVRLDKRSKKMVATLQSTEHPARPIHGAAVRAIVIKTSWVLTSLGGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRETVMGFISSARGYKVHPAMTKW 573 MPWPVK+REVV++RSVRLDKR+KKM+A+ QST+HPARPI A VRAIV +TSWVLTSLGGSKT+++FE TDPKGSLP+A++G MQ+ FPRETV GF+SSAR ++HPAMTKW Sbjct: 1 MPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMIGFMQVKFPRETVAGFVSSARNVELHPAMTKW 113
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: A0A328C4Z6_9DELT (START domain-containing protein n=1 Tax=Lujinxingia litoralis TaxID=2211119 RepID=A0A328C4Z6_9DELT) HSP 1 Score: 89.7 bits (221), Expect = 2.550e-17 Identity = 55/168 (32.74%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 37 RIPRSSSLSLRGETIANKHIGRLYMAFLNTTSTLDWVKYLVEVEELPVAASSKGGEEQTVMFQKFKMPWPVKNREVVVQRSVRLDKRSKKMVATLQSTEHPARPIHGAAVRAIVIKTSWVLTSLGGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRETVMGFISSAR 540 ++ SS + RGE +A+ HIG+L F + WV E L + GE + +F +P+P+K+R+ V+Q RLD+ ++ VA+++S + RP + VRA+ T + +L G +T + E+ TDPKG LP LV +Q +P +T+ G I A+ Sbjct: 43 QVEGSSVFAFRGEIVADVHIGKLLTVFADGNQRRHWVDRYDEHGTL------ERGELSERYWIRFGLPFPIKDRDYVLQTEGRLDQANQVFVASIESVDDARRPENDCCVRAMTYSTYYRFEALEGERTRMIVEVHTDPKGLLPDWLVNRIQRDWPSKTLGGLIRQAK 204
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: A0A496XU05_9PROT (START domain-containing protein n=1 Tax=Epsilonproteobacteria bacterium TaxID=2026809 RepID=A0A496XU05_9PROT) HSP 1 Score: 89.0 bits (219), Expect = 4.020e-17 Identity = 51/164 (31.10%), Postives = 94/164 (57.32%), Query Frame = 1 Query: 22 RTFSARIPRSSSLSLRGETIANKHIGRLYMAFLNTTSTLDWVKYLVEVEELPVAASSKGGEEQTVMFQKFKMPWPVKNREVVVQRSVRLDKRSKKMVATLQSTEHPARPIHGAAVRAIVIKTSWVLTSLGGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRET 513 + ++A +P ++ +GETI N I ++ ++ WVK L +V ++ S + + +M+Q+ ++PWP+KNR+ V + ++ K ++ ++S +H P +R ++ + +VLTSLG SKT ++ EI+TDPKG +P LV M+Q +P +T Sbjct: 33 KVYTASVPGTTVKGFKGETIMNDSIEKILYVIMDDEHRSKWVKRL-KVSKMLEEIS----DYEAIMYQEIELPWPLKNRDFVFWGKIERPEKGK-VILKMKSVKHKDAP-KTVGIRGELLLSKYVLTSLGKSKTKIEVEILTDPKGLIPKWLVNMIQAQWPYKT 189
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: A0A5C6UNU6_9DELT (START domain-containing protein n=6 Tax=Bradymonadales TaxID=1779134 RepID=A0A5C6UNU6_9DELT) HSP 1 Score: 87.0 bits (214), Expect = 3.060e-16 Identity = 53/168 (31.55%), Postives = 89/168 (52.98%), Query Frame = 1 Query: 37 RIPRSSSLSLRGETIANKHIGRLYMAFLNTTSTLDWVKYLVEVEELPVAASSKGGEEQTVMFQKFKMPWPVKNREVVVQRSVRLDKRSKKMVATLQSTEHPARPIHGAAVRAIVIKTSWVLTSLGGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRETVMGFISSAR 540 ++ SS + RGE +A+ HIG++ F + WV E L GE + +F +P+P+K+R+ V+Q + RL++ + +AT++S + RP + VRA+ T + +L G +T + E+ TDPKG LP LV +Q +P +T+ G I A+ Sbjct: 55 QVEGSSVFAFRGEIVADVHIGKILTVFADGDQRRHWVDRYDEHGTLD------RGELSERYWIRFGLPFPIKDRDYVLQTNGRLNQDDQVFIATIESVDDARRPENDCCVRAMTYSTYYRFEALEGERTRMIVEVHTDPKGLLPNWLVNRIQRDWPSKTLGGLIRQAK 216
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: A0A523J4T1_9DELT (START domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523J4T1_9DELT) HSP 1 Score: 86.7 bits (213), Expect = 3.070e-16 Identity = 57/188 (30.32%), Postives = 94/188 (50.00%), Query Frame = 1 Query: 1 VEDSGVFRTFSARIPRSSSLSLRGETIANKHIGRLYMAFLNTTSTLDWVKYLVEVEELPVAASSKGGEEQTVMFQKFKMPWPVKNREVVVQRSVRLDKRSKKMVATLQSTEHPARPIHGAAVRAIVIKTSWVLTSLGGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRETVMGFISSARG--YKVHP 558 V D+ + A+IP S + RGET +L ++ DWV L L + + V++Q+FK+PWP+KNR+ V + K + +V ++S HP P VRA +I + + +T +G K+ ++ EI++DPKG++P LV ++Q +P +T+M S K HP Sbjct: 24 VSDNNGITVYKAKIPGSKLVGFRGETSIYASAEKLMHILVDNNHRKDWVDRLKTSTVLETVSPY-----EYVIYQEFKLPWPLKNRDFVYRGKATRHKDGR-VVLVMKSEIHPKAP-KTVGVRAELINSKYTITPIGKYKSKLEVEIMSDPKGAIPKWLVNLIQKKWPYKTLMAIKSQVEKTYVKEHP 204
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: A0A496XNM8_9PROT (START domain-containing protein n=1 Tax=Epsilonproteobacteria bacterium TaxID=2026809 RepID=A0A496XNM8_9PROT) HSP 1 Score: 84.3 bits (207), Expect = 2.090e-15 Identity = 54/176 (30.68%), Postives = 92/176 (52.27%), Query Frame = 1 Query: 37 RIPRSSSLSLRGETIANKHIGRLYMAFLNTTSTLDWVKYLVEVEELPVAASSKGGEEQTVMFQKFKMPWPVKNREVVVQRSVRLDKRSKKMVATLQSTEHPARPIHGAAVRAIVIKTSWVLTSLGGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRETVMGFISSA-RGY-KVHP 558 ++P + + RGET +L ++ DWV L L G + +++Q+FK+PWP+KNR+ V R K+ ++V ++S HP P VRA ++ + + +T +G K+ ++ EI++DPKG++P LV ++Q +P +T+M S R Y K HP Sbjct: 36 KVPGTKIVGFRGETSIYASAEKLMHILIDNNHRKDWVDRLKTSNVLETI-----GPYEYIIYQEFKLPWPLKNRDFVY-RGKATRKKDGRVVLVMKSEVHPNAP-KTVGVRAELVNSRYTITPIGKFKSKLEVEIMSDPKGAIPKWLVNIIQKKWPHKTLMAIKSQVERKYVKEHP 204
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: A0A2E7UXM6_9DELT (START domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UXM6_9DELT) HSP 1 Score: 79.7 bits (195), Expect = 1.860e-13 Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 1 Query: 67 RGETIANKHIGRLYMAFLNTTSTLDWVKYLVEVEELPVAASSKGGEEQTVMFQKFKMPWPVKNREVVVQRSV-RLDKRSKKMVATLQSTEHPA--RPIHG-AAVRAIVIKTSWVLTSLGGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRETVMGFISSARGYKV 552 RG T N + L +++ + WV L E E + + A Q++++Q+F MPWPV +RE ++Q +V R D+R+ K+ +L ST P P G VR ++ +SW T L S+T VD DP G+ P L+ ++Q +FP T+ F A KV Sbjct: 90 RGVTTVNVPLCELISFYVDPSLATTWVDMLTEYEVIELNAR------QSIVWQRFDMPWPVADREFLLQVNVTRPDERTVKV--SLVSTTDPRFPPPTDGDGLVRGVMSPSSWTFTRLSESRTKVDMVGHADPSGAFPAWLINIIQQTFPYNTLSAFAREAENGKV 247
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: A0A3C1KYH3_9DELT (START domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3C1KYH3_9DELT) HSP 1 Score: 78.6 bits (192), Expect = 5.190e-13 Identity = 50/187 (26.74%), Postives = 86/187 (45.99%), Query Frame = 1 Query: 22 RTFSARIPRSSSLSLRGETIANKHIGRLYMAFLNTTSTLDWVKYLVEVEELPVAASSKGGEEQTVMFQKFKMPWPVKNREVVVQRSVRLDKRSKKMVATLQSTEHPARPIHGAAVRAIVIKTSWVLTSL-GGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRETVMGFISSARGYKV--HPAMTKW 573 + + + S+ + +G AN H R+ F + WV ++L V S + + +F +PWPV +R+ V+ LD + + M A ++S P VR V+ T + +L G KT + E+ TDP+G LP LV ++Q +P +T+ G + +A+ + HP W Sbjct: 54 KVYRKEVKGSNMFAFKGVMTANVHFARVARVFSTSKLRRTWVDRWAADKDLKVHNSK-----ERTYYIRFGLPWPVSDRDYVLNTKATLDVKRRIMTARIRSVNFPGYGPKSCCVRGKVVGTFYKFEALPGAEKTRLTVEVQTDPRGLLPAWLVNLIQKKWPYKTLTGLVRAAKKPNIQNHPDYVDW 235
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Match: A0A2E4D8F7_9PROT (START domain-containing protein n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E4D8F7_9PROT) HSP 1 Score: 75.9 bits (185), Expect = 2.350e-12 Identity = 49/175 (28.00%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 28 FSARIPRSSSLSLRGETIANKHIGRLYMAFLNTTSTLDWVKYLVEVEELPVAASSKGGEEQTVMFQKFKMPWPVKNREVVVQRSVRLDKRSKKMVATLQSTEHPARPIHGAAVRAIVIKTSWVLTSLGGSKTAVDFEIITDPKGSLPTALVGMMQMSFPRETVMGFISSARGYKV 552 +S + ++ S+R I N I ++ N + WV LVE + + + + + +++ MPWPV +R+ VV ++L + + ++ +STEHP P VRA I+ + S G T V+ ++ DPKGS+PT V ++Q S P + +M A K+ Sbjct: 38 YSKKSKNTAIRSMRAHGIVNAPISKITAILRNVEAAGSWVPNLVERKYVKNISDT-----EAILYDITDMPWPVNDRDTVVHYKLKLSEDKRSLILYFKSTEHPNAPAGEGKVRA-EIEFGKIYFSPRGEDTYVELILLVDPKGSIPTWAVNLVQSSMPYDFIMSLSEFASKTKL 206 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1391.2941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1391.2941.1 >prot_L-elsbetiae_contig1391.2941.1 ID=prot_L-elsbetiae_contig1391.2941.1|Name=mRNA_L-elsbetiae_contig1391.2941.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp MAFLNTTSTLDWVKYLVEVEELPVAASSKGGEEQTVMFQKFKMPWPVKNRback to top mRNA from alignment at L-elsbetiae_contig1391:23554..24972+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1391.2941.1 ID=mRNA_L-elsbetiae_contig1391.2941.1|Name=mRNA_L-elsbetiae_contig1391.2941.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1419bp|location=Sequence derived from alignment at L-elsbetiae_contig1391:23554..24972+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1391:23554..24972+ >mRNA_L-elsbetiae_contig1391.2941.1 ID=mRNA_L-elsbetiae_contig1391.2941.1|Name=mRNA_L-elsbetiae_contig1391.2941.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=936bp|location=Sequence derived from alignment at L-elsbetiae_contig1391:23554..24972+ (Laminarionema elsbetiae ELsaHSoW15)back to top |