mRNA_L-elsbetiae_contig13890.2928.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: D7FVG7_ECTSI (Protochlorophyllide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG7_ECTSI) HSP 1 Score: 117 bits (292), Expect = 5.640e-30 Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKSGVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATNVIKAS 198 +A KDSKLCNV FT EAQRRLSAR+S VKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATN+IK + Sbjct: 219 KAYKDSKLCNVLFTLEAQRRLSARRSAVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATNLIKVA 284
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: A0A7S1VW05_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VW05_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.760e-22 Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKSGVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATNVIK 192 +A KDSKLCNVFFTRE QRRL+ KS + V+CF+PGLI SSGLFR Q +F+K+FD AATNV+K Sbjct: 15 KAYKDSKLCNVFFTRELQRRLAGAKSEITVNCFTPGLIVSSGLFREQPKLFTKVFDVAATNVLK 78
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: A0A6U3UQ39_9STRA (Protochlorophyllide reductase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UQ39_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.060e-22 Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKSGVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATNVIK 192 +A KDSKLCNV FTRE QRRL +G+KV+CFSPGLI +GLFR+QNPIF+K+FD AATN++K Sbjct: 144 KAYKDSKLCNVLFTRELQRRLDKDGTGIKVNCFSPGLIVGTGLFRDQNPIFTKVFDIAATNLLK 207
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: A0A7S4M8I2_9STRA (Protochlorophyllide reductase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M8I2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 5.250e-21 Identity = 42/64 (65.62%), Postives = 54/64 (84.38%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKSGVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATNVIK 192 +A KDSKLCNV FTRE QRRL A G+K +CF+PGLI +GLFR+QNP+F+K+FDFAAT+++K Sbjct: 292 KAYKDSKLCNVLFTRELQRRLDASGVGIKANCFNPGLIVGTGLFRDQNPLFTKVFDFAATDLLK 355
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: A0A7S2HIS0_9STRA (Protochlorophyllide reductase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HIS0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 7.410e-21 Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKSGVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATNVIK 192 +A KDSKLCNV FTRE QRR+ +G+ V+CFSPGLI +GLFR+QNPIF+K+FD AATN++K Sbjct: 296 KAYKDSKLCNVLFTRELQRRMDKAGTGINVNCFSPGLIVGTGLFRDQNPIFTKVFDIAATNLLK 359
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: A0A7S1CZV4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZV4_CYCTE) HSP 1 Score: 87.0 bits (214), Expect = 5.200e-20 Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKS--GVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATNVIK 192 +A KDSKLCNVFFTRE QRRL A S GV +CF+PGLI S+GLFR+Q+ IF+KIFD AAT+++K Sbjct: 30 KAYKDSKLCNVFFTRELQRRLEASPSTKGVTANCFNPGLIVSTGLFRDQSKIFTKIFDVAATDLLK 95
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: A0A7S2R3H0_9STRA (Protochlorophyllide reductase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3H0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 7.760e-20 Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKSGVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAAT 180 +A KDSKLCNV FTRE Q RL A KS V V+CFSPGLI S+GLFR+QN IF+K+FDFAAT Sbjct: 298 KAYKDSKLCNVLFTRELQHRLEAAKSRVTVNCFSPGLIVSTGLFRDQNQIFTKLFDFAAT 357
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: A0A7S3LBS2_9STRA (Protochlorophyllide reductase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBS2_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.970e-20 Identity = 42/66 (63.64%), Postives = 56/66 (84.85%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKS--GVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATNVIK 192 +A KDSKLCNV FTRE QRRL A+ + G+ +CF+PGLI S+GLFR+QNP+F+K+FDFAAT+++K Sbjct: 262 KAYKDSKLCNVLFTRELQRRLEAQDATKGITANCFNPGLIVSTGLFRDQNPLFTKVFDFAATDLLK 327
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: A0A836C919_9STRA (Protochlorophyllide reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C919_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.160e-19 Identity = 42/63 (66.67%), Postives = 52/63 (82.54%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKSGVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAATNVI 189 +A KDSKLCNV FTRE RRL+ + S V V+CFSPGLIP+SGLFR+QNP+F K+F FAA +V+ Sbjct: 233 KAYKDSKLCNVLFTRELNRRLTKKDSKVHVNCFSPGLIPTSGLFRSQNPLFVKVFGFAAGSVL 295
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Match: A0A7S2XW84_9STRA (Protochlorophyllide reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW84_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.400e-19 Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 1 RADKDSKLCNVFFTREAQRRLSARKSGVKVDCFSPGLIPSSGLFRNQNPIFSKIFDFAAT 180 +A KDSKLCNV FT E QRRL A S V V+CFSPGLIPS+GLFRNQNP+F+K FD A + Sbjct: 281 KAYKDSKLCNVLFTEECQRRLDANGSKVTVNCFSPGLIPSTGLFRNQNPLFTKAFDIATS 340 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13890.2928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13890.2928.1 >prot_L-elsbetiae_contig13890.2928.1 ID=prot_L-elsbetiae_contig13890.2928.1|Name=mRNA_L-elsbetiae_contig13890.2928.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=69bp RADKDSKLCNVFFTREAQRRLSARKSGVKVDCFSPGLIPSSGLFRNQNPIback to top mRNA from alignment at L-elsbetiae_contig13890:255..461+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13890.2928.1 ID=mRNA_L-elsbetiae_contig13890.2928.1|Name=mRNA_L-elsbetiae_contig13890.2928.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=207bp|location=Sequence derived from alignment at L-elsbetiae_contig13890:255..461+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13890:255..461+ >mRNA_L-elsbetiae_contig13890.2928.1 ID=mRNA_L-elsbetiae_contig13890.2928.1|Name=mRNA_L-elsbetiae_contig13890.2928.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=414bp|location=Sequence derived from alignment at L-elsbetiae_contig13890:255..461+ (Laminarionema elsbetiae ELsaHSoW15)back to top |