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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1108 |
| Cds size | 507 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815545.4216309-UTR-L-elsbetiae_contig1388:916..1126 | 1622815545.4216309-UTR-L-elsbetiae_contig1388:916..1126 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1388 917..1126 + |
| 1691682951.2299144-UTR-L-elsbetiae_contig1388:916..1126 | 1691682951.2299144-UTR-L-elsbetiae_contig1388:916..1126 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1388 917..1126 + |
| 1622815545.4349017-UTR-L-elsbetiae_contig1388:2579..2906 | 1622815545.4349017-UTR-L-elsbetiae_contig1388:2579..2906 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1388 2580..2906 + |
| 1691682951.2387192-UTR-L-elsbetiae_contig1388:2579..2906 | 1691682951.2387192-UTR-L-elsbetiae_contig1388:2579..2906 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1388 2580..2906 + |
| 1622815545.4819915-UTR-L-elsbetiae_contig1388:4595..4659 | 1622815545.4819915-UTR-L-elsbetiae_contig1388:4595..4659 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1388 4596..4659 + |
| 1691682951.2702675-UTR-L-elsbetiae_contig1388:4595..4659 | 1691682951.2702675-UTR-L-elsbetiae_contig1388:4595..4659 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1388 4596..4659 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815545.4487467-CDS-L-elsbetiae_contig1388:2906..3236 | 1622815545.4487467-CDS-L-elsbetiae_contig1388:2906..3236 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1388 2907..3236 + |
| 1691682951.2469413-CDS-L-elsbetiae_contig1388:2906..3236 | 1691682951.2469413-CDS-L-elsbetiae_contig1388:2906..3236 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1388 2907..3236 + |
| 1622815545.4636512-CDS-L-elsbetiae_contig1388:4418..4595 | 1622815545.4636512-CDS-L-elsbetiae_contig1388:4418..4595 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1388 4419..4595 + |
| 1691682951.2552626-CDS-L-elsbetiae_contig1388:4418..4595 | 1691682951.2552626-CDS-L-elsbetiae_contig1388:4418..4595 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1388 4419..4595 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1388.2919.1 >prot_L-elsbetiae_contig1388.2919.1 ID=prot_L-elsbetiae_contig1388.2919.1|Name=mRNA_L-elsbetiae_contig1388.2919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp
MTGGHGSDNAAGPAEGPPLEERRLGGEQEGGDLEEPETNGHEKTSAAPAP
SPTPQATVAVKLTPAAAGGAPAGSGGDCRRIWEFRASERLSDREKGLLPN
KHPVQQAPLQQRCANGDSFTAPAPTDWSRVGDGQTRRWQADGLRESDGLR
MAQMCDDLRRKRRGAQQQ* back to topmRNA from alignment at L-elsbetiae_contig1388:917..4659+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1388.2919.1 ID=mRNA_L-elsbetiae_contig1388.2919.1|Name=mRNA_L-elsbetiae_contig1388.2919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3743bp|location=Sequence derived from alignment at L-elsbetiae_contig1388:917..4659+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGATTGGAGGGTGGCTGTGCGAGAGGAAACCGGCGCCGCCGTCAAGAA
CGCGGCGGCAACCAGCGGAATCGACGGCGTTGGCCTCGGCAGCCGTAGCA
CCGGAGACGGCGCCGGTGGCGGGGGCGCACACGGCGTTTCTTCCAGCAGC
AGCGGCAGCAACAGGCTGGGCGAGGGTGATTCAGGGGCCGTCGGCGGCGC
TCGTGACAAGGTACGCACACGAAATTATTATACTTTGTTTCACCGAACAC
ACCGTCTTGGGGGGATTTTTGGAGGGATTGACGGCGGCGCTTTTCTTCGG
ACCAAGTGAGGTGGGCAAGTAGGCAGGTAGGTGTCTTGCGACACGGCAAA
GGCGGCCGCGTTTTGATGCCTGAGTGAGTGTGCCCTGGAGCGGTGCTGGA
GTTGGTAATTTGCACCCGCCGGATGGGTATTCTGAGGGCCGCTGTCGACC
GATGGTTTCGGTGGCGTGTGTGTGGCACAGGGCCGTGAGCACTCGGGGGG
CGTGCGTGGACGTGTTTCCTCCCGCCGCCCGCTGGGTGTGCTGAACCTGC
CCGAACGGAAAGTATGCCCCCGCTGCCGTGTGTCTTGCTTTGCCTTGCAG
AGCAATAAATGGATGAATGCCCGGATAGAAAATCATGTTTTAGGCCGGGG
TTCCGTGCAGGCGGTCGGTAGGTAGGCCGTGGGTGCTCTTTTTCGCGGTG
CACATGGCGTATATAGCGTGTTGGTTGGTCTGGGCCCTGTCGGTGAGTTT
TTTTGGCACCACGGTGCACTACTGTGGCACCGTCGTGTTGTACACGCACC
GGCTCTTGGTTGCTAAGTGAGCAGGGCTTATTTAGGGACAGCATTGCCCC
GCTCCATTCCTCCCACCGGGCGCAGCAAGTACCCTCTCTTCGCAGCATAA
ACAGTGTCCACACAAGCGTGCCTCCTCGGGCAAAAGCCCTACCCGGGGGC
CTATTTATGCTTGCACGCTCGAGGCGGCGTACGTATTTGGCGCGATCTTG
GAAGAAGATACATCGTTCGTGGGGTGCGATGTGCCTCTGCCCCCTTGAGT
CGATGCGAACGTCGTCGCACCCGACATGACGCGTTGCCACACCCGGCCGG
GCTCATCGTTTGAGAGCATGGATAGGCACGGAACCCCGATACATAGTCGC
ATCATCAAATAAACGGCTTGCACGAGAACGGGGGCTACAAGCCTATAAGC
TGTAAGCCGTATCGTACATCGAGTCAAACAAAACGAGGTGGCGCGAAACA
AATACTTCGTTTACGCGAGGTGCATGCCCAAGCTGGTTTTGTCCTACATG
TGGGCTTGCGGCGTCGGCACAGGGAGCCGAGAAGACTGACCGCGCTTGAT
AAATCCCCAGTTTGGTCGCGTGCAGATACGTCGCCATAGTATCAGAACAT
CCGTGAGTGTTTGATACCCCCTGTTCCTCTTTTCGTTGCCCCTATTTGTC
CACCCCGCCAGCTGTACCAAAGCTATTTAACAGCTCTCCCTAACGTATTC
CGAATGTCGGTCGGGTGGGGAGCCCCGAGCTCGGCTAACCTCGGCTGACC
TCGGCTGACCTCGGCTAACCTCGGCTGCTGCTTGCTTGCCCAACCCCCTC
TCCCTGTCTGATTATCACTGCCGTCGTCGTACAATGTCGCTGCTTTCACG
CGTTCGTTGCCAGGCGTTAGTCAAGAGGCAATCCAGCGCCGTCAGCGGTA
GCGGCAGCAGACGGCCGCCGAGAGGGCCTGACGCCCCTCCCGCAGTCGTC
ACGACCACGTCCATCACCACAACCACTACTATCGACGCGGTACCATCTAG
TCCCCATGGTAGCGGTGGTAGCAGCAGCGGCAGCACCGGCCGGACAACAT
CGTCACCACCACCATCATCATCAGCAGCAGCAGCAGCAGCAGCAGCTGTC
GGCAAGCGGCCGGCTTCTGCGGGCAGCGTCAGCAAGAGGAGCGCCAAAAA
TGCCGGCGCCGGCAGCGGCAGCGGTAGCAGAGGCGGGGGGATGACAGGCG
GCCATGGTAGCGACAATGCAGCAGGACCAGCAGAAGGGCCGCCACTAGAG
GAGAGAAGGCTTGGAGGAGAACAAGAGGGAGGAGACCTCGAAGAACCAGA
AACAAACGGCCACGAAAAAACCTCGGCAGCGCCAGCACCATCCCCCACCC
CTCAGGCGACCGTGGCAGTGAAGCTTACCCCGGCAGCGGCCGGGGGGGCG
CCCGCGGGGAGCGGCGGCGATTGTCGCCGTATCTGGGAGTTCCGTGCGTC
AGAAAGGCTGTCTGACAGGGAGAAAGGGCTGCTGCCGAACAAGCATCCGG
TGCAGCAGGCGCCCCTGCAGGTGACCTACAGTAATTGTCTTGTGTTTTTT
GCTGGGGCTCCTGACCGCGTTGTGCTCCTCAGTCGACGAGTGGCACCTGC
CGTAGGTGACACAAGTTACCGCCCCCCCCCACGGACAGATTTTCGAAGCT
CGATCCCTCTCCAGCAAGAAGAGATGCCAGTGCCGAAAGGGCGTTGCGTT
GGAAAGATCTACTCGAGGTCTGCCCGAAAATGTATCGTTTGGTGCTGGCA
CCCTCTTCGTTGCGGAGTAATGGAGCTCCAAAAGTCGGTCCAGGGGGGAG
GGTGGTATCTTGTGTCTCCTACGGTATAACGTTTGCCTCGTTCGATGTCT
CGATTTTGTTTTTCCAGCCCCATCTTTCCCCATGTATGACTTCGTATTTG
TCTGAATATTGTGGATATGTTGGTAGACTATAGCAGAAAACGCGCTCCAC
CCAAAATCTCGCGGACAAGCGTCGACATCGGCGTAAACTGTGAAAACCAG
CCCGCGTCCGTGTTGCGCGGACGGGGCGTATTCTTTTGAGGCGGGCAATG
CGTGCAGCTGCAGCTGCAGCTGCAGCTGCTGCTGCTACTGCTGCTGTCCC
CTTGCCTTTTCAAAGCCACCCGGCGAGTTTCACTCGTCGACTGCAAGCAG
CACCGGCAAGGCCCGTGAGAGCCCTGTTTTAAGGGCTGCCGTCTCTTTTT
TTCCCATCGTCTTCGTCTAAGGTGCTGGCGAAACCCGTGACCTCAAGGGG
GATCGCCGGCAAGGACCGAACAAGGGCCCATGTTGTTTCTATAGTGGAGC
CCCCCCCCCCCCCCCCCCCCCCTTGATTGCTGATATGTGTCTTTGTTGAA
GTTGGGTTAGGTTGCTGGCGCCTAAAAGTGCAGTTCGAGCCCGCGGATAC
CAACGGGTGCCTTCGTTCTCCTCCCCCCCCCCCCCCCCCCCAACAACCTT
GCCACCACGTGTTGATGGGGTTTTGACCCCGCGCCTCCCTTCTTTCTGGC
CGGTTTTATCTTGTCTTTTGTTTTTCTTAAGGATGCCCACACGTTTACCA
GCGCTCGGACGAGGATCCGGGCAAATTTAGAAGCAGCGTGCCATTTCGGC
AGCTGCGTAGTAACCGCAGTGGTATTTTTTTTTTTAATCTCGCCCGCCCG
TTTGACTCTTGTTGACCCCCCGCCTCGGCCGACGCCACCACCACGGCAAC
AGCAACGCTGCGCGAACGGGGACTCCTTCACGGCTCCGGCGCCGACGGAC
TGGTCCAGGGTAGGAGACGGGCAGACGAGGCGGTGGCAGGCGGATGGGCT
GCGGGAAAGCGACGGCCTGAGGATGGCGCAGATGTGCGACGACCTCAGGC
GCAAGCGAAGGGGAGCGCAGCAGCAGTAGTAGCAGCAGCACCAGCAGCAC
CAGCACCAGCAGCAGCAGCAGTGAGACCAACCGACGATAACGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1388:917..4659+ >mRNA_L-elsbetiae_contig1388.2919.1 ID=mRNA_L-elsbetiae_contig1388.2919.1|Name=mRNA_L-elsbetiae_contig1388.2919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig1388:917..4659+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACAGGCGGCCATGGTAGCGACAATGCAGCAGGACCAGCAGAAGGGCC
GCCACTAGAGGAGAGAAGGCTTGGAGGAGAACAAGAGGGAGGAGACCTCG
AAGAACCAGAAACAAACGGCCACGAAAAAACCTCGGCAGCGCCAGCACCA
TCCCCCACCCCTCAGGCGACCGTGGCAGTGAAGCTTACCCCGGCAGCGGC
CGGGGGGGCGCCCGCGGGGAGCGGCGGCGATTGTCGCCGTATCTGGGAGT
TCCGTGCGTCAGAAAGGCTGTCTGACAGGGAGAAAGGGCTGCTGCCGAAC
AAGCATCCGGTGCAGCAGGCGCCCCTGCAGATGACAGGCGGCCATGGTAG
CGACAATGCAGCAGGACCAGCAGAAGGGCCGCCACTAGAGGAGAGAAGGC
TTGGAGGAGAACAAGAGGGAGGAGACCTCGAAGAACCAGAAACAAACGGC
CACGAAAAAACCTCGGCAGCGCCAGCACCATCCCCCACCCCTCAGGCGAC
CGTGGCAGTGAAGCTTACCCCGGCAGCGGCCGGGGGGGCGCCCGCGGGGA
GCGGCGGCGATTGTCGCCGTATCTGGGAGTTCCGTGCGTCAGAAAGGCTG
TCTGACAGGGAGAAAGGGCTGCTGCCGAACAAGCATCCGGTGCAGCAGGC
GCCCCTGCAGCAACGCTGCGCGAACGGGGACTCCTTCACGGCTCCGGCGC
CGACGGACTGGTCCAGGGTAGGAGACGGGCAGACGAGGCGGTGGCAGGCG
GATGGGCTGCGGGAAAGCGACGGCCTGAGGATGGCGCAGATGTGCGACGA
CCTCAGGCGCAAGCGAAGGGGAGCGCAGCAGCAGTAGCAACGCTGCGCGA
ACGGGGACTCCTTCACGGCTCCGGCGCCGACGGACTGGTCCAGGGTAGGA
GACGGGCAGACGAGGCGGTGGCAGGCGGATGGGCTGCGGGAAAGCGACGG
CCTGAGGATGGCGCAGATGTGCGACGACCTCAGGCGCAAGCGAAGGGGAG
CGCAGCAGCAGTAG back to top
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