mRNA_L-elsbetiae_contig13874.2918.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: A0A6H5JG50_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG50_9PHAE) HSP 1 Score: 216 bits (550), Expect = 2.680e-67 Identity = 117/180 (65.00%), Postives = 131/180 (72.78%), Query Frame = 1 Query: 1 NDAQQLLERLQKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTN------------------------------RYKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELC-GAQPEVIFTDSDQAAMGAIEQEYKGSQHKFCLFHINENLGKHGRGLG 447 NDAQQL RLQ+EN +V FQLDKD R+ RIAWA++EQK+NALRYYPIIIQDNTF TN RYKY LALIVVVDKEN+TQIAMQA+LSNERT+DF FLFR FRELC GAQPEVIFTD DQAAM AI+QE S + CLFH++ENLGKHG+GLG Sbjct: 95 NDAQQLFTRLQQENVWVRFQLDKDGRIVRIAWALEEQKKNALRYYPIIIQDNTFGTNAPLVYSGKLLIPRVSDCVSDLNSACSWYSTRYKYWLALIVVVDKENYTQIAMQALLSNERTEDFRFLFRVFRELCEGAQPEVIFTDGDQAAMTAIDQECPDSTQQLCLFHMDENLGKHGQGLG 274
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: A0A6H5JYV9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV9_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.330e-62 Identity = 108/148 (72.97%), Postives = 125/148 (84.46%), Query Frame = 1 Query: 4 DAQQLLERLQKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTNRYKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELC-GAQPEVIFTDSDQAAMGAIEQEYKGSQHKFCLFHINENLGKHGRGL 444 DA+Q L + QKE+ +V FQLD+DRRV+RIAWA+DEQ+ NALRY IIIQDNTF TN YKYHLALIVVVD EN+TQIAMQA+L+NERT+DF FLFR FRELC G QPEVIFTD+DQAAM AI++E S K CLFH++ENL KHGRGL Sbjct: 90 DARQFLGKFQKEDVWVRFQLDEDRRVARIAWALDEQQGNALRYSSIIIQDNTFNTNEYKYHLALIVVVDNENYTQIAMQALLANERTEDFKFLFRVFRELCEGVQPEVIFTDADQAAMTAIDEECPASHQKLCLFHMDENLMKHGRGL 237
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: A0A6H5K030_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K030_9PHAE) HSP 1 Score: 211 bits (536), Expect = 2.900e-62 Identity = 108/150 (72.00%), Postives = 126/150 (84.00%), Query Frame = 1 Query: 4 DAQQLLERLQKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTNR--YKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELC-GAQPEVIFTDSDQAAMGAIEQEYKGSQHKFCLFHINENLGKHGRGL 444 DA+Q L +LQKE+ +V FQLD+DRRV+ IAWA+DEQKRNALRY IIIQDNTF TN YKYHLALIVVVDKEN+TQIAMQA+L+NERT+D+ FLFR FRELC G QPEV+FTD+DQAAM AI++E S K CLFH++ENL KHG GL Sbjct: 19 DARQFLGKLQKEDLWVRFQLDEDRRVTHIAWALDEQKRNALRYSRIIIQDNTFNTNERVYKYHLALIVVVDKENYTQIAMQALLANERTEDYKFLFRVFRELCQGMQPEVMFTDADQAAMTAIDEECPASHQKLCLFHMDENLMKHGEGL 168
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: A0A6H5KJW1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW1_9PHAE) HSP 1 Score: 194 bits (494), Expect = 6.470e-59 Identity = 102/148 (68.92%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 4 DAQQLLERLQKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTNRYKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELC-GAQPEVIFTDSDQAAMGAIEQEYKGSQHKFCLFHINENLGKHGRGL 444 DA+Q L +LQKE +V FQLD+DRRV+RIAWA+DEQ+ NALRY IIIQDNTF TN YKYHLALIVVVDKEN+TQIAMQA+L+NERT+DF FLFR FRELC G QPE AAM AI++E S K CLFH++ENL KHG GL Sbjct: 90 DARQFLGKLQKEGVWVRFQLDEDRRVARIAWALDEQQGNALRYSSIIIQDNTFNTNEYKYHLALIVVVDKENYTQIAMQALLANERTEDFKFLFRVFRELCEGVQPE--------AAMTAIDEECPASHQKLCLFHMDENLMKHGEGL 229
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: A0A6H5KGZ7_9PHAE (MULE domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ7_9PHAE) HSP 1 Score: 189 bits (481), Expect = 3.540e-55 Identity = 94/141 (66.67%), Postives = 115/141 (81.56%), Query Frame = 1 Query: 34 KENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTNRYKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELC-GAQPE-VIFTDSDQAAMGAIEQEYKGSQHKFCLFHINENLGKHGRGLGE 450 KE C++ F LD++ R++RIAWA+DEQK NALRY+ +IIQDNTF TN+YKYHLAL V VDKEN+T IAMQA+L+NERT+DF FLFR FREL GAQPE VIFTD+D A M AI++E S+ K C FH+ EN+ KHG+GLGE Sbjct: 2 KEGCWMRFTLDENGRINRIAWALDEQKTNALRYHSLIIQDNTFNTNQYKYHLALKVAVDKENYTHIAMQALLANERTEDFEFLFREFRELIEGAQPEYVIFTDADAATMAAIDKESPASRGKLCQFHMGENMRKHGKGLGE 142
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: A0A6H5K2Y1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y1_9PHAE) HSP 1 Score: 173 bits (438), Expect = 2.710e-47 Identity = 90/181 (49.72%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 31 QKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTN----------------------------------------RYKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELCG-AQPEVIFTDSDQAAMGAIEQEYKGSQHKFCLFHINENLGKHGRGLGE 450 Q+E C++ F +D+ ++R+AWA++ Q+ ALRY+P+IIQDNTF TN RYKYHLALIVVVDKEN+T I QA+L++ERT+DF FLFRAFRE+ G AQP+VIFTD+D AAM AI++E S+H+ CLFH++ENL KHG+GLGE Sbjct: 137 QQERCWMRFTMDEKGCINRVAWALESQRTTALRYFPLIIQDNTFNTNKFDSAFTYETKASLSYRFENGFVKTCACPLCAQFLGYAPTRYKYHLALIVVVDKENYTHIVFQALLASERTEDFDFLFRAFREMIGGAQPQVIFTDADAAAMAAIQKECPWSRHQLCLFHLDENLRKHGKGLGE 317
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: A0A6H5KFX3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX3_9PHAE) HSP 1 Score: 172 bits (435), Expect = 3.270e-47 Identity = 94/159 (59.12%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 31 QKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTNRYKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELC-GAQPEVIFTDSDQA--------------------AMGAIEQEYKGSQHKFCLFHINENLGKHGRGL 444 Q E+ +V FQLD+DRRV+RIAWA+DEQ+RNALRY IIIQDNTF TN YKYHLALIVVVD EN+TQIAMQA+L+NERT+DF FLFR F LC G QPE AM AI++E S K CLFH++ENL KHGRGL Sbjct: 3 QTEDVWVRFQLDEDRRVARIAWALDEQQRNALRYSSIIIQDNTFNTNEYKYHLALIVVVDNENYTQIAMQALLANERTEDFKFLFRVFGGLCEGLQPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMTAIDEECPASHQKLCLFHMDENLMKHGRGL 161
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: A0A6H5LBK2_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBK2_9PHAE) HSP 1 Score: 166 bits (419), Expect = 3.710e-47 Identity = 78/149 (52.35%), Postives = 113/149 (75.84%), Query Frame = 1 Query: 1 NDAQQLLERLQKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTNRYKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELC-GAQPEVIFTDSDQAAMGAIEQEYKGSQHKFCLFHINENLGKHGRGL 444 NDAQQLL +L+++ F F+LD++ R++ +AWA +EQ+RNA +Y+PII+ D TF T++Y + LA IVVVDKEN TQIAMQA+L ER + FVFL +F++L G+ P+VIFTD+DQ+ M AI Q + G+ +K C +H +N+ +HG+GL Sbjct: 99 NDAQQLLHQLEEDGAFKNFKLDEENRLTDVAWAHEEQRRNAEKYFPIIVSDTTFNTSKYNHKLAFIVVVDKENLTQIAMQALLETERHESFVFLMESFKKLIRGSSPQVIFTDTDQSEMSAIAQVFPGALNKLCYWHTEQNVKEHGKGL 247
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: D7G8C7_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C7_ECTSI) HSP 1 Score: 169 bits (428), Expect = 1.500e-46 Identity = 81/149 (54.36%), Postives = 111/149 (74.50%), Query Frame = 1 Query: 1 NDAQQLLERLQKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTNRYKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELC-GAQPEVIFTDSDQAAMGAIEQEYKGSQHKFCLFHINENLGKHGRGL 444 NDAQ + LQ+ F+ F+ D+ R++ IAWA +QK NA+RY+ +I+QDNTF TN YK+HLALIVVVDKENH+QIAMQA+LS+ER++ F F+F +F++LC G PEV+FTD D AAM AI + Y + +K C++H N+ +HG GL Sbjct: 22 NDAQLFVSHLQQSEAFMRFKADEQGRITSIAWAYQQQKYNAVRYHSVIVQDNTFNTNIYKFHLALIVVVDKENHSQIAMQALLSDERSESFEFVFESFKQLCEGGTPEVVFTDCDAAAMLAIAKVYPSALNKLCIWHTMGNIREHGGGL 170
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE) HSP 1 Score: 164 bits (416), Expect = 3.070e-44 Identity = 86/151 (56.95%), Postives = 109/151 (72.19%), Query Frame = 1 Query: 1 NDAQQLLERLQKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQDNTFKTNRYKYHLALIVVVDKENHTQIAMQAMLSNERTDDFVFLFRAFRELCGA-QPEVIFTDSDQAAMGAIEQEYKGSQHKFCLFHINENLGKHGRGLGE 450 NDAQ L+ LQ F+ F+ + D R++ IAWA +QK A+RY+ IIIQDNTF TN YK+ LALIVVVDKENHTQIAMQA+L+NER++ F F+F +F+ELCG P V+FTD D AAM AI Y + +K C++H EN+ HGRGL E Sbjct: 299 NDAQLLVGHLQNTEAFLRFKHE-DGRMTCIAWASQDQKVLAMRYHKIIIQDNTFNTNVYKFFLALIVVVDKENHTQIAMQALLANERSESFEFIFESFKELCGGGSPGVVFTDCDSAAMLAIANVYPSALNKLCIWHTMENIRDHGRGLAE 448 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13874.2918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13874.2918.1 >prot_L-elsbetiae_contig13874.2918.1 ID=prot_L-elsbetiae_contig13874.2918.1|Name=mRNA_L-elsbetiae_contig13874.2918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp NDAQQLLERLQKENCFVGFQLDKDRRVSRIAWAVDEQKRNALRYYPIIIQback to top mRNA from alignment at L-elsbetiae_contig13874:3550..4327+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13874.2918.1 ID=mRNA_L-elsbetiae_contig13874.2918.1|Name=mRNA_L-elsbetiae_contig13874.2918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=778bp|location=Sequence derived from alignment at L-elsbetiae_contig13874:3550..4327+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13874:3550..4327+ >mRNA_L-elsbetiae_contig13874.2918.1 ID=mRNA_L-elsbetiae_contig13874.2918.1|Name=mRNA_L-elsbetiae_contig13874.2918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=900bp|location=Sequence derived from alignment at L-elsbetiae_contig13874:3550..4327+ (Laminarionema elsbetiae ELsaHSoW15)back to top |