mRNA_L-elsbetiae_contig13865.2912.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13865.2912.1
Unique NamemRNA_L-elsbetiae_contig13865.2912.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: D7G747_ECTSI (Similar to MGC83835 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G747_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 1.440e-157
Identity = 224/231 (96.97%), Postives = 228/231 (98.70%), Query Frame = 1
Query:    1 GLDRDLTTCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPTSQPLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKVSEDE 693
            GLDRDLTTCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFP+RAVVPGVVGARNVKWLDKV+ASKEESKNHWQQKDYKGFNSSTDWDTADFSK  SPAIQQLPINSAILSPADGSSVS+YDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPTSQPLYRTWAWTLWEASLPVPKG+GEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKV EDE
Sbjct:  383 GLDRDLTTCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPVRAVVPGVVGARNVKWLDKVIASKEESKNHWQQKDYKGFNSSTDWDTADFSK--SPAIQQLPINSAILSPADGSSVSQYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPTSQPLYRTWAWTLWEASLPVPKGKGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKV-EDE 610          
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: A0A835ZG56_9STRA (Oxidoreductase, molybdopterin-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG56_9STRA)

HSP 1 Score: 320 bits (821), Expect = 4.820e-104
Identity = 152/237 (64.14%), Postives = 185/237 (78.06%), Query Frame = 1
Query:    1 GLDRDLTTCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPTS-QPLYRTWAWTLWEASLPVPKGQ-----GEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKVSEDE 693
            GLDRD+T  YG SIP   AVDP GDVLLAFEMNGEP+PRDHGFP+R VVPGVVGAR+VKWL K++AS  ES+NHWQQKDYKGF+ S DWDT DFS A  PAIQ+LP+ SAI +P   + VS ++D + V+GYA +GGGR +VRVDV+ADGG TW +A+L P   QPL+R WAWTLWEA +PVP+G       ++++ CKA DA YN+QPE   PIWN+RGVL+N WHRV L VS++E
Sbjct:  324 GLDRDMTQAYGGSIPVHKAVDPHGDVLLAFEMNGEPLPRDHGFPVRVVVPGVVGARSVKWLGKIIASTGESQNHWQQKDYKGFSPSVDWDTVDFSTA--PAIQELPVVSAICAPTAHALVSAHEDTIPVRGYAWSGGGRGIVRVDVTADGGATWHTAQLAPPEGQPLHRAWAWTLWEAEVPVPEGARGKEGAKLEIACKATDASYNTQPELAAPIWNLRGVLTNHWHRVPLVVSDEE 558          
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: UPI001C41B5B9 (sulfite oxidase, mitochondrial n=1 Tax=Solea senegalensis TaxID=28829 RepID=UPI001C41B5B9)

HSP 1 Score: 310 bits (795), Expect = 6.190e-100
Identity = 149/240 (62.08%), Postives = 181/240 (75.42%), Query Frame = 1
Query:    1 GLDRDLT-TCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPT--------SQPLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKVSEDE 693
            GLD+D+T T YGSSIP   AV  +GDVLLA+EMNGE +P DHGFP+R VVPG VGARNVKWL K+V S EES +HWQQ DYKGF+  TDWDT DF  A  PA+Q+LPI SAI +PADG+ V R ++EVTV+GYA +GGGR VVRVDVS DGG+TW  A+L+ +        S P  R WAW LWE ++P+P G  E++++CKAVD  YN QP+   PIWN+RGVLSN+WHRV +KV EDE
Sbjct:  335 GLDKDVTGTTYGSSIPINKAVSEEGDVLLAYEMNGETLPADHGFPVRVVVPGTVGARNVKWLGKIVVSAEESNSHWQQNDYKGFSPGTDWDTVDFKSA--PAVQELPIQSAITAPADGAMVDRSEEEVTVQGYAWSGGGREVVRVDVSVDGGKTWQVAQLRTSDKGQVYEPSPPPGRAWAWKLWEVTVPIPPGAKELEIICKAVDNSYNVQPDTVAPIWNLRGVLSNAWHRVTVKVREDE 572          
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: UPI001864D563 (sulfite oxidase, mitochondrial n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864D563)

HSP 1 Score: 310 bits (793), Expect = 1.200e-99
Identity = 151/239 (63.18%), Postives = 179/239 (74.90%), Query Frame = 1
Query:    1 GLDRDLT-TCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPT--------SQPLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKVSED 690
            GLDRD+T T YG+SIP G AV  +GDVLLA+EMNGE +P DHGFP+R VVPG VGARNVKWL K+V S+EES +HWQQ DYKGF+  TDWDT DF  A  PAIQ+LP+ SAI  PA+GS V R  +EVTVKGYA +GGGR VVRVDVS DGG TW  A+L+ +        S P  R WAW LWE + P+P    E+++VCKAVD+ YN QP+   PIWN+RGVLSN+WHRV +KVSED
Sbjct:  338 GLDRDITGTTYGASIPVGKAVSEEGDVLLAYEMNGEELPADHGFPVRVVVPGTVGARNVKWLGKIVLSQEESSSHWQQNDYKGFSPGTDWDTVDFKSA--PAIQELPVQSAITQPAEGSVVERGQEEVTVKGYAWSGGGREVVRVDVSLDGGRTWHVAQLRSSEKGQEAAASPPPGRAWAWKLWEVTAPLPPAAQELEIVCKAVDSSYNVQPDTVAPIWNLRGVLSNAWHRVRVKVSED 574          
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: UPI001FB595D5 (sulfite oxidase, mitochondrial isoform X1 n=2 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB595D5)

HSP 1 Score: 307 bits (787), Expect = 1.090e-98
Identity = 150/240 (62.50%), Postives = 181/240 (75.42%), Query Frame = 1
Query:    1 GLDRDLT-TCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELK--------PTSQPLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKVSEDE 693
            GLD+D+T T YG+SIP   A+  +GDVLLA+EMNGE IP DHGFP+RAVVPGVVGARNVKWL K+V S EES +HWQQ DYKGF+  TDWDT DF  A  PAIQ+LPI SAI +PADG+++ R  + VTVKGYA +GGGR VVRVDVS DGG+TW  A+L+         +S P  R WAW LWE + P P    E+++VCKAVD+ YN+QP+   PIWN+RGVLSN+WHRV +KV EDE
Sbjct:  339 GLDKDVTGTTYGASIPINKAISEEGDVLLAYEMNGEDIPLDHGFPVRAVVPGVVGARNVKWLGKIVVSAEESSSHWQQNDYKGFSPGTDWDTVDFKSA--PAIQELPIQSAITTPADGATIDRSVETVTVKGYAWSGGGREVVRVDVSLDGGKTWQVAQLRGSEEGQGPESSPPPGRAWAWKLWEITAPFPHEAEELEIVCKAVDSSYNAQPDTVSPIWNLRGVLSNAWHRVKVKVREDE 576          
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: A0A6P7IB49_9TELE (Sulfite oxidase n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7IB49_9TELE)

HSP 1 Score: 306 bits (784), Expect = 2.840e-98
Identity = 147/240 (61.25%), Postives = 181/240 (75.42%), Query Frame = 1
Query:    1 GLDRDLT-TCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPT--------SQPLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKVSEDE 693
            GLD+D+T T YG+SIP   AV  +GDVLLA+EMNGE +P DHGFP+R VVPG+VGARNVKWL K++ S EES +HWQQ DYKGF+  TDWDT DF  A  PAIQ+LPI SAI +PADG++VSR D+ +TVKGYA +GGGR VVRVDVS DGG+TW  A+L+ +        S P  R WAW LWE + P+P    E++++CKAVD  YN QP+   PIWN+RGVLSN+WHRV +K+ EDE
Sbjct:  336 GLDKDVTGTTYGASIPLNKAVSEEGDVLLAYEMNGEDLPPDHGFPVRVVVPGIVGARNVKWLGKIIVSAEESSSHWQQNDYKGFSPGTDWDTVDFKSA--PAIQELPIQSAITTPADGAAVSRSDETLTVKGYAWSGGGREVVRVDVSLDGGKTWQVAQLRSSERGETPEPSPPPGRAWAWKLWEITAPLPAEAQEVEIICKAVDNSYNVQPDTVSPIWNLRGVLSNAWHRVKVKIREDE 573          
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: A0A553QPX1_9TELE (Sulfite oxidase n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QPX1_9TELE)

HSP 1 Score: 306 bits (784), Expect = 3.330e-98
Identity = 147/235 (62.55%), Postives = 182/235 (77.45%), Query Frame = 1
Query:    1 GLDRDLT-TCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPTSQ----PLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKVSED 690
            GLD+D+T T YG+SIP   A+  +GDVLLA+EMNGE +P DHGFP+R VVPGVVGARNVKWL K+V S EESK+HWQQ DYKGF+  TDWDT DF  A  PAIQ+LPI SAI  PA+G+SV+  D+EVTVKGYA +GGGR VVRVD+S DGG TW  A+L+ +       + R WAW LWE ++P+P+   E+++VCKAVD  YN+QP+   PIWN+RGVLSN+WHRV +KVS+D
Sbjct:  347 GLDKDVTGTPYGASIPLNKAMSDEGDVLLAYEMNGEDLPLDHGFPVRVVVPGVVGARNVKWLGKIVVSSEESKSHWQQNDYKGFSPGTDWDTVDFKSA--PAIQELPIQSAITHPAEGTSVNLSDEEVTVKGYAWSGGGREVVRVDISIDGGNTWHVAKLRTSDDGVPPAVGRAWAWKLWEINIPLPQKPQELEIVCKAVDNSYNTQPDTVAPIWNLRGVLSNAWHRVKIKVSDD 579          
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: UPI00097D918A (sulfite oxidase, mitochondrial n=1 Tax=Paralichthys olivaceus TaxID=8255 RepID=UPI00097D918A)

HSP 1 Score: 300 bits (769), Expect = 4.430e-98
Identity = 144/240 (60.00%), Postives = 178/240 (74.17%), Query Frame = 1
Query:    1 GLDRDLT-TCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPTSQ--------PLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKVSEDE 693
            GLD+D+T T YG+SIP   AV  +GDVLLA+EMNG+ +P DHGFP+R VVPG VGARNVKWL K++ S EES +HWQQ DYKGF+  TDWDT DF  A  PAIQ+LPI SAI +PADG+ V R ++EV VKGYA +GGGR VVRVDVS DGG+TW  A+L+ + +        P  R WAW LWE + P+P    ++++VCKAVD  YN QP+   PIWN+RGVLSN+WHRV +K+ EDE
Sbjct:  169 GLDKDVTGTTYGASIPLNKAVGEEGDVLLAYEMNGKELPADHGFPVRVVVPGTVGARNVKWLGKIIVSAEESSSHWQQNDYKGFSPGTDWDTVDFKSA--PAIQELPIQSAITTPADGAVVDRSEEEVIVKGYAWSGGGREVVRVDVSLDGGKTWQVAQLRTSDKGQAAEPAPPTGRAWAWKLWEVTAPLPPEAQDLEIVCKAVDNSYNMQPDTVAPIWNLRGVLSNAWHRVKVKIREDE 406          
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: UPI000A2A4CF5 (sulfite oxidase n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4CF5)

HSP 1 Score: 305 bits (781), Expect = 4.680e-98
Identity = 141/229 (61.57%), Postives = 179/229 (78.17%), Query Frame = 1
Query:    1 GLDRDLTT--CYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPTSQPLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKV 681
            G D+D+ T   YGSSIP   A+  +GDVLLA+EMN +PIP DHG+P+RA+VPGVVGARNVKWL KVVASK+ES +HWQQ DYKGF  S DWDT +F  A SPAIQ+ P+ SAI  P+  S VSR D+EVTV+GYA +GGGR +VRVD+S DGG+TW++A L+   QP  R WAW+LWEA++P+P+G  E+ +VCKA+D+ YN QP+   PIWN+RGVLSN+WH+V + V
Sbjct:  329 GYDKDMMTGTTYGSSIPVEKAMSSRGDVLLAYEMNXKPIPXDHGYPVRAIVPGVVGARNVKWLSKVVASKDESTSHWQQNDYKGFCPSVDWDTVNF--AGSPAIQEQPVTSAICQPSPHSKVSRDDEEVTVRGYAWSGGGRGIVRVDISVDGGKTWSTANLEGAKQPPNRAWAWSLWEATVPIPEGVNELSIVCKAIDSSYNVQPDSVAPIWNLRGVLSNAWHQVNVAV 555          
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Match: A0A6J2VTQ0_CHACN (Sulfite oxidase n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VTQ0_CHACN)

HSP 1 Score: 305 bits (782), Expect = 7.000e-98
Identity = 148/239 (61.92%), Postives = 181/239 (75.73%), Query Frame = 1
Query:    1 GLDRDLT-TCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVPGVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSPAIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAELKPTSQ--------PLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKVSED 690
            GLDRD+T T YG+SIP   A++ +GD LLA+EMNGE +P DHG+P+RAVVPGVVGARNVKWL K+V S+EESK+HWQQ DYKGF+  TDWDT DF  A  PAIQ+LPI SAI  P++GSSV R  +EVTVKGYA +GGGR VVRVDVS DGG+TW  A L+ + +           R WAW LWE ++P+P    E+++VCKAVD  YNSQP+   PIWN+RGVLSN+WHRV +K+ ED
Sbjct:  343 GLDRDVTGTVYGASIPLNKAINEEGDCLLAYEMNGEALPADHGYPVRAVVPGVVGARNVKWLGKIVVSEEESKSHWQQNDYKGFSPGTDWDTVDFKSA--PAIQELPIQSAITQPSEGSSVDRSMEEVTVKGYAWSGGGREVVRVDVSVDGGKTWHVANLQNSQKGQGPAXXXXXXRAWAWKLWEIAVPLPPEAQELEIVCKAVDNSYNSQPDSVAPIWNLRGVLSNAWHRVKVKIDED 579          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13865.2912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G747_ECTSI1.440e-15796.97Similar to MGC83835 protein n=1 Tax=Ectocarpus sil... [more]
A0A835ZG56_9STRA4.820e-10464.14Oxidoreductase, molybdopterin-binding domain-conta... [more]
UPI001C41B5B96.190e-10062.08sulfite oxidase, mitochondrial n=1 Tax=Solea seneg... [more]
UPI001864D5631.200e-9963.18sulfite oxidase, mitochondrial n=1 Tax=Megalops cy... [more]
UPI001FB595D51.090e-9862.50sulfite oxidase, mitochondrial isoform X1 n=2 Tax=... [more]
A0A6P7IB49_9TELE2.840e-9861.25Sulfite oxidase n=1 Tax=Parambassis ranga TaxID=21... [more]
A0A553QPX1_9TELE3.330e-9862.55Sulfite oxidase n=1 Tax=Danionella translucida Tax... [more]
UPI00097D918A4.430e-9860.00sulfite oxidase, mitochondrial n=1 Tax=Paralichthy... [more]
UPI000A2A4CF54.680e-9861.57sulfite oxidase n=1 Tax=Exaiptasia diaphana TaxID=... [more]
A0A6J2VTQ0_CHACN7.000e-9861.92Sulfite oxidase n=1 Tax=Chanos chanos TaxID=29144 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13865contigL-elsbetiae_contig13865:2365..4259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score459.9
Seed ortholog evalue7e-127
Seed eggNOG ortholog2880.D7G747
Preferred nameSUOX
KEGG rclassRC00168
KEGG koko:K00387
KEGG ReactionR00533
KEGG Pathwayko00920,ko01100,ko01120,map00920,map01100,map01120
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005759,GO:0005829,GO:0006790,GO:0007584,GO:0008150,GO:0008152,GO:0008482,GO:0009605,GO:0009987,GO:0009991,GO:0016491,GO:0016667,GO:0016670,GO:0019418,GO:0020037,GO:0031667,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043546,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046906,GO:0048037,GO:0050662,GO:0050896,GO:0055114,GO:0070013,GO:0070221,GO:0097159,GO:1901363
EggNOG free text desc.sulfite oxidase
EggNOG OGsCOG2041@1,KOG0535@2759,KOG4576@1,KOG4576@2759
EC1.8.3.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size696
Cds size696
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13865.2912.1prot_L-elsbetiae_contig13865.2912.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13865 2365..4259 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815544.8330905-CDS-L-elsbetiae_contig13865:2364..25571622815544.8330905-CDS-L-elsbetiae_contig13865:2364..2557Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13865 2365..2557 -
1691682950.895045-CDS-L-elsbetiae_contig13865:2364..25571691682950.895045-CDS-L-elsbetiae_contig13865:2364..2557Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13865 2365..2557 -
1622815544.8495662-CDS-L-elsbetiae_contig13865:2854..30631622815544.8495662-CDS-L-elsbetiae_contig13865:2854..3063Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13865 2855..3063 -
1691682950.9068346-CDS-L-elsbetiae_contig13865:2854..30631691682950.9068346-CDS-L-elsbetiae_contig13865:2854..3063Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13865 2855..3063 -
1622815544.8597374-CDS-L-elsbetiae_contig13865:3408..35131622815544.8597374-CDS-L-elsbetiae_contig13865:3408..3513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13865 3409..3513 -
1691682950.9150877-CDS-L-elsbetiae_contig13865:3408..35131691682950.9150877-CDS-L-elsbetiae_contig13865:3408..3513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13865 3409..3513 -
1622815544.8697977-CDS-L-elsbetiae_contig13865:4070..42591622815544.8697977-CDS-L-elsbetiae_contig13865:4070..4259Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13865 4071..4259 -
1691682950.9264996-CDS-L-elsbetiae_contig13865:4070..42591691682950.9264996-CDS-L-elsbetiae_contig13865:4070..4259Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13865 4071..4259 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13865.2912.1

>prot_L-elsbetiae_contig13865.2912.1 ID=prot_L-elsbetiae_contig13865.2912.1|Name=mRNA_L-elsbetiae_contig13865.2912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
GLDRDLTTCYGSSIPAGMAVDPKGDVLLAFEMNGEPIPRDHGFPIRAVVP
GVVGARNVKWLDKVVASKEESKNHWQQKDYKGFNSSTDWDTADFSKASSP
AIQQLPINSAILSPADGSSVSRYDDEVTVKGYAVAGGGRAVVRVDVSADG
GETWTSAELKPTSQPLYRTWAWTLWEASLPVPKGQGEMKLVCKAVDAGYN
SQPERPEPIWNIRGVLSNSWHRVGLKVSEDE*
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mRNA from alignment at L-elsbetiae_contig13865:2365..4259-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13865.2912.1 ID=mRNA_L-elsbetiae_contig13865.2912.1|Name=mRNA_L-elsbetiae_contig13865.2912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1895bp|location=Sequence derived from alignment at L-elsbetiae_contig13865:2365..4259- (Laminarionema elsbetiae ELsaHSoW15)
GGGCTCGACCGTGACCTGACCACGTGCTACGGCTCGTCCATCCCAGCTGG TATGGCGGTAGATCCGAAAGGCGACGTCTTGTTGGCGTTCGAGATGAACG GGGAACCCATCCCCAGGGACCACGGCTTTCCCATCAGGGCGGTCGTTCCT GGGGTCGTCGGGGCGCGCAACGTCAAGTGGCTGGACAAGGTGCGGCACTT CGCCCTTCCTTGTGGAGTCTGTCGGCAAGATCGTATGCTGCTACTGTGTT GAGCGTTTATGTACTCTGACTGCATGCATGCACCGTAAGCCGTTGTCGGG TTGACACTGCTGCTGCTGCCCTGTGGTTTATCGCCGCCGGCGCTGTACGC TTGGAAGTAGATGCGCGGTTGCGCTGGAGGAGGGGGGGGGGCAGGGACGT GGTCGTTGTGCCGGGGCTGGCGCTTTTCGGGACCGCCATTCAGCAGCATC GAAGGTCCATCAAGCACACATACATTTTGTACGCACCTGCACGGTCGGTA GCGCTCAAGGACAAGGGTGTCGAACGAGCGAGCGCCCTGTCAGTCGCCGC TGCTTCCGGCCCCCAATGGACGCTCGCTGTTGTGCAGACTTGTCCGGCTC CCCTCGCGTTTAAGAGCCCCCCTCCTCTCTGCCCAGCTGGTTATCCCAAG CAAGAGACAGAGCACGGTTGGAAAAACACCGATCGATCTACGACTCCCTG ACTGCTCGTTCCGCGTTCTGATGTGCCCCTTTTCCCCATTACCTAGGTGG TTGCTTCGAAGGAGGAAAGCAAGAACCATTGGCAGCAAAAGGATTACAAG GGCTTTAACTCGTCCACCGACTGGGACACGGCTGACTTCTCCAAGGCAAG CGTGCTTCTTCGCTTTAGGGTCCATAGATCAGCGACGACGACATTTTCCA GACCCAGCGGGGGGCTCTCCGTGCAACCGTAAATGCCTATATTTATGGGC GTTCGGGGTGGTTGTAGCCTGGAAGATCCAATCATAAAAAGCTATTTCGT CCAACTTCTCGCTAACGCTGGCCCAAGTACGTAAGGCATAACATCACACT CCAAAAGTCGCTGCTCTCGCTGCCGACACGAACGCCGCGCACGCACGACA GAGGCTCCGACAATAACGGACCGCCCCCACAAATACCCCACCCCTTTTTT TCGCCCACGCTACTGCCATGCCATCACGCAAACCCCGAAATCGCAGTCTC CGGCAATCCAGCAGTTGCCGATCAACTCGGCGATCCTCTCACCGGCGGAC GGGTCTTCGGTGTCCCGGTACGACGACGAGGTTACGGTCAAGGGGTACGC GGTAGCCGGTGGAGGTCGCGCGGTGGTGCGGGTGGATGTGAGCGCGGACG GAGGGGAGACCTGGACCTCGGCAGAACTCAAGCCGACCTCGCAGCCTCTG TACAGGTGAGAGAACACGGCTTTGGCAACAAGCGTGTCGTCACCCGGATA TGTACGCTGTAAGACATCGCCTGCCGTGTGCTGCGGCGGAATATCGGAGC CCCCAACCACAGCATCAGCGTGCGGCGCGTACCGTTTGTAGCTGCAGCGG ACGCCTCCTGCAGGCTCAACGAGATTCTGTCCTAATTATTTCCATGAATC ACTCACACAATTTATCGTTGTCTCGCTGTGTGTATATGTATGTATGTTGT ACATACCACCTCCGGCTTGCTCGCTTTGGATGTGTCGTGCTTGGATGGAC AGGACTTGGGCGTGGACTTTGTGGGAAGCGTCGTTGCCGGTTCCCAAGGG CCAAGGCGAGATGAAGCTGGTGTGCAAGGCGGTAGACGCGGGCTACAACT CCCAGCCGGAGAGGCCTGAGCCCATCTGGAACATCCGAGGCGTGCTGAGC AACAGCTGGCACCGAGTGGGTCTCAAGGTTTCAGAGGACGAGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13865:2365..4259-

>mRNA_L-elsbetiae_contig13865.2912.1 ID=mRNA_L-elsbetiae_contig13865.2912.1|Name=mRNA_L-elsbetiae_contig13865.2912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig13865:2365..4259- (Laminarionema elsbetiae ELsaHSoW15)
GGGCTCGACCGTGACCTGACCACGTGCTACGGCTCGTCCATCCCAGCTGG
TATGGCGGTAGATCCGAAAGGCGACGTCTTGTTGGCGTTCGAGATGAACG
GGGAACCCATCCCCAGGGACCACGGCTTTCCCATCAGGGCGGTCGTTCCT
GGGGTCGTCGGGGCGCGCAACGTCAAGTGGCTGGACAAGGGGCTCGACCG
TGACCTGACCACGTGCTACGGCTCGTCCATCCCAGCTGGTATGGCGGTAG
ATCCGAAAGGCGACGTCTTGTTGGCGTTCGAGATGAACGGGGAACCCATC
CCCAGGGACCACGGCTTTCCCATCAGGGCGGTCGTTCCTGGGGTCGTCGG
GGCGCGCAACGTCAAGTGGCTGGACAAGGTGGTTGCTTCGAAGGAGGAAA
GCAAGAACCATTGGCAGCAAAAGGATTACAAGGGCTTTAACTCGTCCACC
GACTGGGACACGGCTGACTTCTCCAAGGCAAGCGTGGTTGCTTCGAAGGA
GGAAAGCAAGAACCATTGGCAGCAAAAGGATTACAAGGGCTTTAACTCGT
CCACCGACTGGGACACGGCTGACTTCTCCAAGGCAAGCTCTCCGGCAATC
CAGCAGTTGCCGATCAACTCGGCGATCCTCTCACCGGCGGACGGGTCTTC
GGTGTCCCGGTACGACGACGAGGTTACGGTCAAGGGGTACGCGGTAGCCG
GTGGAGGTCGCGCGGTGGTGCGGGTGGATGTGAGCGCGGACGGAGGGGAG
ACCTGGACCTCGGCAGAACTCAAGCCGACCTCGCAGCCTCTGTACAGTCT
CCGGCAATCCAGCAGTTGCCGATCAACTCGGCGATCCTCTCACCGGCGGA
CGGGTCTTCGGTGTCCCGGTACGACGACGAGGTTACGGTCAAGGGGTACG
CGGTAGCCGGTGGAGGTCGCGCGGTGGTGCGGGTGGATGTGAGCGCGGAC
GGAGGGGAGACCTGGACCTCGGCAGAACTCAAGCCGACCTCGCAGCCTCT
GTACAGGACTTGGGCGTGGACTTTGTGGGAAGCGTCGTTGCCGGTTCCCA
AGGGCCAAGGCGAGATGAAGCTGGTGTGCAAGGCGGTAGACGCGGGCTAC
AACTCCCAGCCGGAGAGGCCTGAGCCCATCTGGAACATCCGAGGCGTGCT
GAGCAACAGCTGGCACCGAGTGGGTCTCAAGGTTTCAGAGGACGAGTAGG
ACTTGGGCGTGGACTTTGTGGGAAGCGTCGTTGCCGGTTCCCAAGGGCCA
AGGCGAGATGAAGCTGGTGTGCAAGGCGGTAGACGCGGGCTACAACTCCC
AGCCGGAGAGGCCTGAGCCCATCTGGAACATCCGAGGCGTGCTGAGCAAC
AGCTGGCACCGAGTGGGTCTCAAGGTTTCAGAGGACGAGTAG
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