mRNA_L-elsbetiae_contig1385.2902.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1385.2902.1
Unique NamemRNA_L-elsbetiae_contig1385.2902.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE)

HSP 1 Score: 611 bits (1575), Expect = 1.860e-206
Identity = 368/611 (60.23%), Postives = 410/611 (67.10%), Query Frame = 2
Query:   98 MAPSDYG---IGGRGMIRDEVVVVG-SDGSSHERFSGSTALTADEGKGKGAHGHDRK-KGDNSRQEDKA----NVFTGIIDFFAGLGKNKNKP---------AAASDADRTPLTAYESELGEESELHD-NLGPLLDPRWSIYPPVAGVKQRRGVSQPVAIK---------------RAPGTRARAPRLPEPADGSSGNGEADXXXXXXXXXXXXXXXDDAESKIKAWQRRRMSAKRESFTEETFVPCYATLTSNMSTESFQEMKYKAPSTRVSSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAEAAGVGPVKQMKSWRRSAPSLAALREDESALWGAGGRDGARWEG--------------------------DQSSAEVNGFNARMAEVFDEQHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREVLHTQSEVCMLSKSL 1750
            MAPS+YG    GG   +RDEV++   +   +  R    TA  A         GHDR  KGD  R   +A    N+FT I+DFFA LGK  N           ++  D+  TP TA ES  GEE++ +D + GPLL+P W+   P AG +QR   S+PVAIK               +APGTR    +  E        GE D                  E K+KAW+++RM+ KR SFTEE FVPCYAT+TSNMSTESF EMKYKAP  RV SAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKR+ AE+RE+  AE    G  + MK       +   +            RDGARW G                          + SSAEV+GFNA+MAEVFDEQ F+SPT RYNFMHAPTMALPGVMFTLREVRSPPK PTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETA VPLL GTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVL+IDAPR+ MVAARA  VKREV+ TQSE+CMLSKSL
Sbjct:    1 MAPSNYGKRGSGGSEWMRDEVMIAADARPPAKARDQKGTAAVA---------GHDRHIKGDERRGGGEAKHQGNIFTAIVDFFAHLGKINNNXXXTRGSRSHSSTDDSLSTPRTADES--GEENDRYDRDPGPLLEPGWAARRPDAGGRQRWSASKPVAIKAAGVREPLRAHALEAKAPGTRCHQRQQEE--------GEEDGGKAGRDEERSVEVHGTDEDKLKAWRQQRMATKRGSFTEERFVPCYATVTSNMSTESFHEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAPAETETEGSRQDMKVENSDEMTSVVVMPV---------RDGARWPGXXXXXXXXXXXXXXXXXXXXXXXGGGEPSSAEVHGFNAKMAEVFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL 583          
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI)

HSP 1 Score: 554 bits (1428), Expect = 3.360e-188
Identity = 289/335 (86.27%), Postives = 303/335 (90.45%), Query Frame = 2
Query:  758 MSTESFQEMKYKAPSTRVSSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAEAAGVGPVKQ-MKSWRRSAPSLAALREDESALWGAGGRDGARWEG---DQSSAEVNGFNARMAEVFDEQHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREVLHTQSEVCMLSKSL 1750
            MSTESFQEMKYKAP  RV SAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKR+ AE+RE+  AE    G  +  MKSWRRSAPSLAALR +ESALWG GGRDGARW G   +  SAEV+GFNA+MAE FDEQ F+SPT RYNFMHAPTMALPGVMFTLREVRSPPK PTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETA VPLL GTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLK+INRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVL+IDAPR+ MVAARA  VKREV+ TQSE+CMLSKSL
Sbjct:    1 MSTESFQEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL 335          
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 301 bits (772), Expect = 1.740e-88
Identity = 177/326 (54.29%), Postives = 219/326 (67.18%), Query Frame = 2
Query:  782 MKYKAPSTRVSSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAEAAGVGPVKQMKSWRRSAPSLAALREDESALWGAGGRDGARWEGDQSSAEVN-GFNARMAEVFDEQHFISPTFRYNFMHA--PTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREVLHTQSEVCMLSKSL 1750
            ++Y+AP  RV SAVAPPSSVARPNYHDA+RRVAVVV+QH++ C       E+R   +  AA   P        R  P+    R    A +G G   G       +   V   F+   A++F E+H++SP +R  F+ A     ALP   F + +V + P  P+V+ IYEFI+TLFN+A LSSECSLVCLIY+ERLME A VPLLA TWKPV+LCGLLLASKVWQDLSSWNVEFSTVYPE+SL+SINRLE ++L  ++WD+ IS+SLYAKYYFALRSL E  DFRRRYN V++IDAPR+  V  R+  V+ E         M SKSL
Sbjct:  214 VQYRAPEKRVPSAVAPPSSVARPNYHDAIRRVAVVVFQHVQNC-------ERRLARVKRAAEHPP--------RPPPT----RAPPHAPFGGGQPGGVSAPLPVTPGAVREAFDPAKADLFHERHYVSPRYRCTFVRALGAAGALPCSAFAMAKVETEPTAPSVEAIYEFIRTLFNRACLSSECSLVCLIYIERLMEVAAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLEHVYLAQVQWDLYISASLYAKYYFALRSLAEGRDFRRRYNCVVQIDAPRADRVQERSLAVREEAAK------MFSKSL 514          
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: A0A1V9Y8F2_9STRA (Cyclin-Y n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8F2_9STRA)

HSP 1 Score: 287 bits (735), Expect = 2.630e-85
Identity = 159/333 (47.75%), Postives = 214/333 (64.26%), Query Frame = 2
Query:  719 ETFVPCYATLTSNMSTESFQEMKYKAPSTRV--SSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAE-AAGVGPVKQMKSWRRSAPSLAALREDESALWGAGGRDGARWEGDQSSAEVNGFNARMAEVFDEQHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREV 1708
            E F P +   T  + T     +KY+AP  RV  S  +APPSSVA+PNY D+LRRV+VV+YQHI+ C+ + +  E    M+    A   P + +     S         D SA+ GA G              ++G    + +VFDE+HF+SP ++Y F+   TM  P   + + +V      P+V+EI+ F K LFN+AQLS+EC++VCLIY+ERLME A++PLL  +WKP++LCGLLL+SKVWQDLSSWNVE S +YP++ L  INRLE LFL  ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN  +KID P S  +  R+A VK E+
Sbjct:   29 ELFQPTHTVCTPKLRTNG---LKYRAPEARVDLSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRIREKEAMASMIVSYEATTLPPESIPEQSLSRSEQRTESFDASAMHGANGI-------------LSGLQLSIEKVFDEEHFVSPQYKYTFVRLSTMH-PLTYYRMEKVNCKTHIPSVEEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLSSKVWQDLSSWNVEISNIYPQFPLHCINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 344          
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: A0A1V9ZAD2_9STRA (Cyclin-Y-like protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZAD2_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.420e-84
Identity = 161/338 (47.63%), Postives = 218/338 (64.50%), Query Frame = 2
Query:  719 ETFVPCYATLTSNMSTESFQEMKYKAPSTRV--SSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAEAAGVGPVKQMKSWRRSAPSLAALREDESALWGAGGRDGARWEGDQSSAE------VNGFNARMAEVFDEQHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREV 1708
            E F P +   T  + T     +KY+AP  RV  S  +APPSSVA+PNY D+LRRV+VV+YQHI+ C          EK + E A +    Q+      A +L+     E+++     R   R E   SS        ++G    + +VFDE+HF+SP ++Y F+  PT+  P   + + +V      P+V+EI+ F K LFN+AQLS+EC++VCLIY+ERLME A++PLL  +WKP++LCGLLL+SKVWQDLSSWNVE S +YP++ L  INRLE LFL  ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN  +KID P S  +  R+A VK E+
Sbjct:   29 ELFQPTHTVCTPKLRTNG---LKYRAPDARVDVSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRC----------EKRLRETAHLATSSQVSY---GATTLSGEPSVEASM----SRSDHRTESFDSSTVHPPNGILSGLQLSLDKVFDEEHFVSPQYKYTFVRLPTLH-PLTYYRMDKVNCKTHIPSVEEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLSSKVWQDLSSWNVEISNIYPQFPLHCINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 345          
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: A0A485KW34_9STRA (Aste57867_12616 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW34_9STRA)

HSP 1 Score: 285 bits (729), Expect = 2.240e-84
Identity = 159/336 (47.32%), Postives = 213/336 (63.39%), Query Frame = 2
Query:  716 EETFVPCYATLTSNMSTESFQEMKYKAPSTRV--SSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAEAAGVGPVKQMKSWRRSAPSLAALREDESALWGAGGRDGARWEGD---QSSAEVNGFNARMAEVFDEQHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREV 1708
            E  F P +   T  +ST     +KY+ P  RV  S  + PPSSVA+PNY D+LRRV+VV+YQHI+ C          EK M E+ G       +    S  + +A+ +  +   G        ++          ++G N    +VFDE+HF++P ++Y F+  P M  P   + + +V      P+VDEI+ F K LFN+AQLS+EC++VCLIY+ERLME A++PLL  +WKP++LCGLLLASKVWQDLSSWNVE S VYP++ L SINRLE LFL  ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN  +KID P S  +  R+A VK E+
Sbjct:   28 ERLFQPTHTVCTPKLSTNG---LKYREPHARVDVSETLPPPSSVAKPNYDDSLRRVSVVLYQHIRRC----------EKRMRESKGASLPGLFRPLSTSVMTESAMDDPTADNLGMASMPDDSFDSSTVMNGQTVLSGLNLSPDKVFDEEHFVTPQYKYQFVRLP-MLHPLTYYKMDKVSCKTHLPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGASWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 349          
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: A0A5D6XKS8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKS8_9STRA)

HSP 1 Score: 282 bits (722), Expect = 4.800e-83
Identity = 163/334 (48.80%), Postives = 222/334 (66.47%), Query Frame = 2
Query:  725 FVPCYATLTSNMSTESFQEMKYKAPSTRVSSAVAPPS---SVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQR-EKMMAEAAGVGPVKQMKSWRRSAPSLAAL--REDESALWGAGGRDGARWEGDQSSAEVNGFNARMAEVFDEQHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREV 1708
            F P +A  T  ++  +   ++Y+ P  RV+S +APPS   SVA+PNY D LRRV+VV+YQH++ C+ KR + E R   +++   GV         R ++P L+A+  RE E           A   G  S+         + E+F E+HF++P ++Y F+  P +  P   F + +V S    P+VDEI+ F K LFNKAQLS+EC++VCLIY+ERLME A+VPLLA TWKP++LCGLLLASKVWQDLSSWNVE S +YP+Y L SINRLE LFL  ++WD+ IS+S+YAKYYFALRSLTEK+DFRRRYN  +++D P S  +  R+A V+ E+
Sbjct:   53 FQPTHAVFTPRLTDSA--ALRYRKPDDRVTS-LAPPSAVSSVAQPNYDDFLRRVSVVLYQHLRRCE-KRHSEELRGPSVVSSTVGVD--------RGTSPFLSAVVSREGEPDALELPSAPLAPSTGPSSTTSPRLLELPVDEIFREEHFVTPQYKYTFVRLPRV-FPMTSFVMEKVSSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEQANVPLLAVTWKPIVLCGLLLASKVWQDLSSWNVEISNIYPQYPLHSINRLERLFLHHIQWDLYISASVYAKYYFALRSLTEKKDFRRRYNYTMRVDPPNSRRLEERSAAVRHEL 373          
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: A0A6G0WM95_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM95_9STRA)

HSP 1 Score: 281 bits (719), Expect = 5.410e-83
Identity = 159/333 (47.75%), Postives = 212/333 (63.66%), Query Frame = 2
Query:  725 FVPCYATLTSNMSTESFQEMKYKAPSTRV--SSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAEAAGVGPVKQMKSWRRSAPSLAALREDESALWGAGGRDGARWEGD---QSSAEVNGFNARMAEVFDEQHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREV 1708
            F P +   T  +ST     +KY+AP  RV  S A+ PPSSVA+PNY D+LRRV+VV+YQHI+ C          EK M ++         +    S P+ A+     S +      +   ++          ++G      +VFDE+HF+SP ++Y F+  P M  P   + + +V      P+VDEI+ F K LFN+AQLS+EC++VCLIY+ERLME A++PLL  +WKP++LCGLLLASKVWQDLSSWNVE S VYP++ L SINRLE LFL  ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN  +KID P S  +  R+A VK E+
Sbjct:   31 FQPTHTVCTPRLSTNG---LKYRAPDARVDVSEALPPPSSVAKPNYDDSLRRVSVVLYQHIRRC----------EKRMRDSKSTA----FQGLFSSNPANASGEVSSSTINDEDPDNSVSFDASTVLHGHTLLSGLALSPDKVFDEEHFVSPQYKYQFIRVP-MLHPLTFYKMDKVTCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 345          
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: W4G411_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G411_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.120e-82
Identity = 162/336 (48.21%), Postives = 213/336 (63.39%), Query Frame = 2
Query:  725 FVPCYATLTSNMSTESFQEMKYKAPSTRV--SSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAEAAGVGPVKQMKSWRRSAPSLAALREDESALWGAGGRDGARWEGDQSSAEVNG------FNARMAEVFDEQHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREV 1708
            F P +   T  + T     +KY+AP  RV  S  +APPSSVA+PNY D+LRRV+VV+YQHI+ C+  ++  E +      + G   +    S   S+   AA+ EDE   +              SS  +NG             VFDE+HF++P ++Y F+  P M  P   + + +V      P+VDEI+ F K LFN+AQLS+EC++VCLIY+ERLME A +PLL  +WKP++LCGLLLASKVWQDLSSWNVE S VYP++ L SINRLE LFL  ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN  +KID P S  +  R+A VK E+
Sbjct:   32 FQPTHTVCTPRLRTNG---LKYRAPDARVDVSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCE--KRMRESKSGGGTLSGGFHGLFHSNSAPASSTHAAAV-EDEPFPF-------------DSSTVLNGQTVLSNLGVSRESVFDEEHFVTPQYKYQFVRLP-MLHPLTYYKMDKVSCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERASIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 347          
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Match: A0A024TK22_9STRA (Cyclin N-terminal domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TK22_9STRA)

HSP 1 Score: 277 bits (708), Expect = 3.700e-81
Identity = 165/350 (47.14%), Postives = 216/350 (61.71%), Query Frame = 2
Query:  725 FVPCYATLTSNMSTESFQEMKYKAPSTRV--SSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAEA----AGVGPVKQMKSW--RRSAPSLAALREDESALWGAGGRDGARWEGD--------QSSAEVNG------FNARMAEVFDEQHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREV 1708
            F P +   T  + T     +KY+AP  RV  S  + PPSSVA+PNY D+LRRV+VV+YQHI+ C          EK + E+    AG+ P           SAP+ +     +S + G    DG+  + D         SS  +NG             VFDE+HF++P + Y F+  P M  P   + + +V      P+VDEI+ F K LFN+AQLS+EC++VCLIY+ERLME A +PLL  +WKP++LCGLLLASKVWQDLSSWNVE S V+P++ L SINRLE LFL  ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN  +KID P S  +  R+A VK E+
Sbjct:   32 FQPTHTVCTPRLRTNG---LKYRAPDARVDVSETLPPPSSVAKPNYDDSLRRVSVVLYQHIRRC----------EKRLRESRGGGAGIVPPGGFHGLFHSTSAPAASTNAVADSIVQGG---DGSADDNDPVHDEPPFDSSTVLNGQTVLSNLGVSRDRVFDEEHFVTPQYTYQFVRLP-MLHPLTYYKMDKVSCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERASIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVFPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 364          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1385.2902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJI4_9PHAE1.860e-20660.23Cyclin N-terminal domain-containing protein n=1 Ta... [more]
D7FH74_ECTSI3.360e-18886.27Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A835YNR4_9STRA1.740e-8854.29Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A1V9Y8F2_9STRA2.630e-8547.75Cyclin-Y n=1 Tax=Thraustotheca clavata TaxID=74557... [more]
A0A1V9ZAD2_9STRA1.420e-8447.63Cyclin-Y-like protein n=2 Tax=Saprolegniaceae TaxI... [more]
A0A485KW34_9STRA2.240e-8447.32Aste57867_12616 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XKS8_9STRA4.800e-8348.80Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0WM95_9STRA5.410e-8347.75Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4G411_9STRA1.120e-8248.21Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A024TK22_9STRA3.700e-8147.14Cyclin N-terminal domain-containing protein n=3 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1385contigL-elsbetiae_contig1385:137..9440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score562.4
Seed ortholog evalue2.4e-157
Seed eggNOG ortholog2880.D7FH74
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of cyclin-dependent protein serine/threonine kinase activity
EggNOG OGsKOG1675@1,KOG1675@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionCyclin-Y
Ec32 orthologEc-00_000210.1
Exons7
Model size2881
Cds size1656
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815543.5623426-UTR-L-elsbetiae_contig1385:136..2331622815543.5623426-UTR-L-elsbetiae_contig1385:136..233Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1385 137..233 +
1691682950.149771-UTR-L-elsbetiae_contig1385:136..2331691682950.149771-UTR-L-elsbetiae_contig1385:136..233Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1385 137..233 +
1622815543.6772978-UTR-L-elsbetiae_contig1385:8312..94401622815543.6772978-UTR-L-elsbetiae_contig1385:8312..9440Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1385 8313..9440 +
1691682950.2364187-UTR-L-elsbetiae_contig1385:8312..94401691682950.2364187-UTR-L-elsbetiae_contig1385:8312..9440Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1385 8313..9440 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815543.5730443-CDS-L-elsbetiae_contig1385:233..8511622815543.5730443-CDS-L-elsbetiae_contig1385:233..851Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 234..851 +
1691682950.1698647-CDS-L-elsbetiae_contig1385:233..8511691682950.1698647-CDS-L-elsbetiae_contig1385:233..851Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 234..851 +
1622815543.5825367-CDS-L-elsbetiae_contig1385:3848..40081622815543.5825367-CDS-L-elsbetiae_contig1385:3848..4008Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 3849..4008 +
1691682950.1806617-CDS-L-elsbetiae_contig1385:3848..40081691682950.1806617-CDS-L-elsbetiae_contig1385:3848..4008Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 3849..4008 +
1622815543.5947993-CDS-L-elsbetiae_contig1385:4987..51031622815543.5947993-CDS-L-elsbetiae_contig1385:4987..5103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 4988..5103 +
1691682950.1901555-CDS-L-elsbetiae_contig1385:4987..51031691682950.1901555-CDS-L-elsbetiae_contig1385:4987..5103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 4988..5103 +
1622815543.6090338-CDS-L-elsbetiae_contig1385:5463..56451622815543.6090338-CDS-L-elsbetiae_contig1385:5463..5645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 5464..5645 +
1691682950.1984-CDS-L-elsbetiae_contig1385:5463..56451691682950.1984-CDS-L-elsbetiae_contig1385:5463..5645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 5464..5645 +
1622815543.627109-CDS-L-elsbetiae_contig1385:6347..66091622815543.627109-CDS-L-elsbetiae_contig1385:6347..6609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 6348..6609 +
1691682950.2068257-CDS-L-elsbetiae_contig1385:6347..66091691682950.2068257-CDS-L-elsbetiae_contig1385:6347..6609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 6348..6609 +
1622815543.6429174-CDS-L-elsbetiae_contig1385:7440..76531622815543.6429174-CDS-L-elsbetiae_contig1385:7440..7653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 7441..7653 +
1691682950.2170885-CDS-L-elsbetiae_contig1385:7440..76531691682950.2170885-CDS-L-elsbetiae_contig1385:7440..7653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 7441..7653 +
1622815543.6569574-CDS-L-elsbetiae_contig1385:8207..83121622815543.6569574-CDS-L-elsbetiae_contig1385:8207..8312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 8208..8312 +
1691682950.2251754-CDS-L-elsbetiae_contig1385:8207..83121691682950.2251754-CDS-L-elsbetiae_contig1385:8207..8312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1385 8208..8312 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1385.2902.1prot_L-elsbetiae_contig1385.2902.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1385 234..8312 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1385.2902.1

>prot_L-elsbetiae_contig1385.2902.1 ID=prot_L-elsbetiae_contig1385.2902.1|Name=mRNA_L-elsbetiae_contig1385.2902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=552bp
MAPSDYGIGGRGMIRDEVVVVGSDGSSHERFSGSTALTADEGKGKGAHGH
DRKKGDNSRQEDKANVFTGIIDFFAGLGKNKNKPAAASDADRTPLTAYES
ELGEESELHDNLGPLLDPRWSIYPPVAGVKQRRGVSQPVAIKRAPGTRAR
APRLPEPADGSSGNGEADGQGEREEEGDGEQAGDDAESKIKAWQRRRMSA
KRESFTEETFVPCYATLTSNMSTESFQEMKYKAPSTRVSSAVAPPSSVAR
PNYHDALRRVAVVVYQHIKTCQWKRQAAEQREKMMAEAAGVGPVKQMKSW
RRSAPSLAALREDESALWGAGGRDGARWEGDQSSAEVNGFNARMAEVFDE
QHFISPTFRYNFMHAPTMALPGVMFTLREVRSPPKTPTVDEIYEFIKTLF
NKAQLSSECSLVCLIYVERLMETAHVPLLAGTWKPVLLCGLLLASKVWQD
LSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALR
SLTEKEDFRRRYNRVLKIDAPRSSMVAARAAVVKREVLHTQSEVCMLSKS
L*
back to top

mRNA from alignment at L-elsbetiae_contig1385:137..9440+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1385.2902.1 ID=mRNA_L-elsbetiae_contig1385.2902.1|Name=mRNA_L-elsbetiae_contig1385.2902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9304bp|location=Sequence derived from alignment at L-elsbetiae_contig1385:137..9440+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGCATACAAATACATACATACGTACCAAGCGCGCGGAGGGTGGGTCTC ACAAACACGAGCAGCAGGTTGCCAACTGCAGGTATTGTAGCCACTCGATG GCTCCATCAGACTACGGTATTGGTGGTCGAGGAATGATACGAGATGAGGT GGTCGTGGTGGGGAGTGATGGATCATCGCATGAGCGGTTTTCGGGCAGCA CGGCGCTGACCGCCGACGAGGGCAAGGGCAAGGGAGCGCATGGCCACGAC AGAAAGAAGGGCGATAACAGCAGACAAGAAGACAAGGCTAACGTCTTCAC CGGTATCATCGACTTCTTCGCCGGCCTCGGCAAAAACAAAAACAAGCCAG CTGCTGCCTCCGATGCCGACCGAACGCCTTTGACCGCGTACGAGAGCGAA CTCGGAGAGGAGTCAGAGTTACACGATAACCTAGGGCCGCTCCTAGATCC CCGATGGAGTATCTACCCTCCCGTAGCCGGGGTGAAGCAGAGGCGAGGCG TGTCCCAGCCCGTGGCAATCAAACGAGCACCCGGGACGCGGGCGCGAGCG CCTCGACTACCTGAACCGGCGGATGGTTCAAGTGGAAATGGGGAGGCGGA TGGCCAAGGAGAACGGGAGGAAGAAGGAGACGGGGAGCAAGCCGGCGACG ATGCGGAGAGCAAGATCAAGGCGTGGCAGCGACGGCGGATGTCAGCGAAG AGGGAGTCTTTCACGGTGAGAACACACGCACGCACACCCAGAAAGAAAGC AAATAAAGAGTAGGGGGATGCAAAAAACTAGCGGTAGAGCCAGCGGTGCG CGGTGCGCGTCATGACTTGGCACGCAGCTTGGAGTTGTGTTCCTATTTTG GTTTCAGAGAGAGTTGGGGGGTTGAGGCAAACCAATCGGTGGTAGGACGG GCGGAGGGAGACTCTGTGAGCGTGCCGTGCGCAATGCGCTGAGCGGGCGG AGAAGAGAAGATTCAACCTCCGCCGACGGACTGAAAACTGGCTCTGTAAA TCGAACAGCTGTCCTGGTTCAACCTACATAGCATTACATCATTAGCCTCC GTGCAAAAGTCACCCGATGCAAAAAAAATGCCCTTCTCTGGACAACAAAT AGTGGCAAGCCTGCCATCCACTGCCCTCTCCCACACTAGTGCCCTTCCAG AATTTCGTGCTACGTACGTGGCAAGGTAGGAGCAGCAGGATTCGGGCCAC TCGCCATGGTTTCATGAAATATGTTCCTCCACACGCACACACAATCAAAT GGTTGAGTTTTTGTACTTTCACCCCGGTCTAATTCGGCTTGCTGGATCTT TTCCCATCGATACATTGGAGGGGGAGATTTTTACACCAGAGTTGATCAAA GCACAGAGAGCGGAGAGTGCTGAGGCCACTGGCCGCTGATCCCGTTCGTG CGAACCCAAGAAAATTTAACAACGTGGAGAGAGAGAGAGAGGAGTGCGGA AACGTCTGGGGTGTTTTCGTTTTGGCCCCTCCGACTCCACGAAGAAAAGA CGGCGACACTTTTCGGTCCGCAGTTTCAGCAAGTAATTCGGGGATGGAGA GCATTTTGTAAAAAAACAAACTTCAAACCCTTCAAACGCGTGCTTCACGA ATCTTCAAGTCAAGCTGCTTGATTTTTAAGATTTAGTAGTGTGCTGCTGT TGTTATCGGGAGGGGGATTCGAAACGAAAGACCGCGTTGTATTTTCGAAG CTTGTCGCTTCTTGGGGTGCGCGCTGGAGGATATTTCGTCCTCTGTCCTC AGAAAGCCGGTTGTCGTACATGCGAAGATGCAGTACGACCACAGCAAGTA GGTAGGAGGAGTTAACAACCTACGTAGGTACACCCGTACGTGCAGGGCAC CGACCGTTCATCTGCCGTCGGGGGTGGCAATCCTCATGGCAGTAGCCAAC CCATACACTAAGAGTGTTTTATTTGGATGTCTAAAACGCCCCTTACTTCG AAATATCATATCATTTGGAGATGAAGCAAGGCCACCTTCGGACGTCTGTC CACATGTATGTATGCATGCTATGTATGTATGTACAAACATGCCATGCTCA CGAGGTACATGATGCAGTGGGCCCGAAGCAAGAGATATCGCAATCTATGG AATCATGTTATACAAAGTAGTAGTTAAATCGTCTCTATTAACGCTGTATG TGGACCGTAGTAGCGCGGCAAATTGAATTGTTAATTCTCCACGGAGTAAC GTCTCTAAATCTCTAAATGTGGAGATTGTTCTGAAATTCTTTTTTTAAAT CACCGAACACCTGCTCGGAATTTACATTACCTACCAGTTACGCAGGCCAG AGGAGCGGTATTTGAAACACTGAAACGTGCCATGCATGCGCCACGAAGAG CGAAACAGCTGACACCTCTGCCGCAGCCTAGTTGTGAAGACCATGGCGCC TTATTCAGCCGCTGAAGCGCCCACTGACTGCCTGTTGGATACGTGGCCCA AAACAACAAACAAGTACAATAGTCTCTGGACACCTGCACGGCATCGATCC TTGGCGAAAATAAGAAAATAAGTAGCCGCAAATTACCATATCGTACTGTT GGTGTCATACAACACTGGTGGTGCATTTGTACAAGCTGGAGTCGAAATCG TCCGGAGGAACACAGACAGCCAGAGAAGCACGGCAATACGACAGCTGTTG ACTGTATCTACAACAGCAGCTCGCGTGCTTACTTTGTTCTTGCCTACGAA ATATATTTCGGAACTACTGCTGTTAATCATTAATGGAACCGTTGGTATAT ACAACAGCAGTCGGATCGGGTGTAGCAGCTCGCGCAACCAACATCCCGAC AGCTGCTAAACCGAAGCCCGGCCCGCTAGCAGAAGGCTCTGGGTAAGAAA GTCAGCCGGAGATTTACAAAAATCATCAAGAGAGTGAGTGTCCGGCCTGC GCGGCGAGTACCTCAAATATGCTGAACGTTACGTAAGAGAGTGCCCGACT TCCAACCCAAACATAAGAAAGTCAGCCCGAGTTCGAACCCCAAGCTTCCT ATCAGCAGGCCGGTGCTGCTGTACTAGCTTTATGTATCCACTGAACAAAA TTGGTGCTTCTTATGTATGTATGTATGTTTTGTTCTGTTTTTACACTGCT CTCTACACACAAAGGGGGCCCGGCCACTCACCCCTGCAATCCACAACCCA CGGGCAAAACCACTCCATGATGCGTGTGCTCGCTCCACTTAACCCTTTTA GACCTGGATGGCCATATGGCGACAATTTGGCGACAGGCCTGGTATCAACG CTTTTCCCCCTAGAGGGAGAACTTCTGTGTAGCCAAGGCCTAGAAAAAAG TTTATCTTGGCTTTCAGTGTAGAAAGTGTCGCCAAAAGTTTGATTTGGCC TTGAGTACGGAAACTGTCGCCATTTTTTTAGTTTTCGATTTTCTCTCCGT TGTGTGCACGGAACCTTGTGTAACCATGGTTTACGTTCCTCCTGCATCTG TGGGATAGCGATGCACCCTCTTGTTTCACCCCAGACACTCTGCTGGCGGG TCCGGCAAGCCCGGGAACAACGCGGGGCCCGCAGATGGGTTCTAGAAGGG ACCGTGGCTCTTTAGCCAATCACAGGCGGCCAGATTATAGGCGGGTTCTA AAAGGGTTAAACTCCTTTGACAAGCCCATCCCTCGCCCCTCCCCACACCC TCTCCGCTCCTCCCTCGCCCAAATTGAAACCAATGGTATCCTCTTCCTGA CGTCGGACCCAGGAGGAAACGTTCGTGCCGTGCTACGCGACGTTGACCTC AAACATGTCGACGGAGTCTTTCCAGGAGATGAAGTACAAGGCCCCTTCGA CAAGGGTGTCCAGCGCCGTAGCACCGCCGAGCTCGGTCGCTCGACCAAAC TACCACGACGCGCTGCGGAGAGGTGAAAACTTAATATCCGCGTGCAAATT TGTGTACCAGCGAACCTAAGTTCTGTTATATACAATTAGCGGCAGCCATC GGTAATTGGCTGTTTTTTTTCAGCAAAATAAACCAGGAAATCAAGGAAGA TGCCTATTTTTTTTCGCGTTTCAGGCGCCTTCAGCAGTCAGTACACATGT ACAAAAGAAGTGGTGTAGAGTGGCCGTTCTAGCGGCTATCGTCGTGCGCG AAATGGTCAAGAAATGCGTTGGTTTGTTTGTTCCGGGGCCCAGACCAGAC CTGTGCCCTTCACCGATCGTGCCAGCCTTAATAAACAAGGGCGCATCATG ATGTGTTTTCTGTTTACCCAGACTTTTACCTGGCTTTACCGGCATATTCG TAGGTGTACCTCCTCGGCCTTGTGTACCCTTGCCCGGTGGATCTGCATAT GTCCGTTTTCGGATCTTCTGATGGCTCTAGCACTTCTGTGACCACGGGCC GTGAGTTGCTAGATTTTTGGAATTAGCAATCTCGATGATACGAGCTAATG TGAAGAAACAACAACAACCTGGCGCTTGCAGATGCAGTGTAAGGCTCCTA AGACTGAGCTTGCCGGTCTTGCCTTGCCGGACGTACCTGCACAAATTGCA AAACATACCCACAGCAGGGTTTCTTGCCTGCTTACCCCGGGACCAAACTG CTGTGAAGTTTTTCGCTGCGATTTCCTTTTTCTTTTTTTGCTCAAGAGCT CCTCAGTGCGCCCGGTGGGGCAGTTTGTTCGTTATGACCGCCTTGTGGTC TCTTCATGGTGTTGGTTGATTTTGTAGACAGAAACGCCGAACGGATAGAG CAACTGATCGCCGGGAGAGGTATCCAACATGGTAGGCGGTATTTTCTCCA CCACCGCGACCGCTACGATGCCATGTACATGGCACGATGCATGCATGTAC TGACCACCCCCCTTGCTGTTTTATCATGTTTGTGTTGTCCTGTATAAACA GTTGCGGTTGTGGTGTACCAGCACATTAAGACGTGCCAATGGAAGCGCCA GGCGGCAGAGCAGAGGGAGAAGATGATGGCGGAGGCGGCGGGGGTCGGCC CTGTCAAGCAAATGAAGGTGAGCTTTCGGTTTAACAAACCGCAGTCAGTA TACACCATACATACAAACGTGCCAGTGGAATATATTTTTATGTTCGAGGA AGACCTCCCAAAAGTTGGAGGTCACCGCCTACGATATCGGATGGTTGTTT TCTCTCTCGACTCAGCGGGAGGTACAGCCGCGGACGGTCATTCTCTGGCT CCGTTCTCTCTCCCTTTAACGGGTTGTATATCCGCGTGCCGTAACGCAAC GCACCGCGTACACAAGCAACACCCAAGGACACAGGAGGCACCGACGGCTG TCCTGTCAAGACACTCCTGCGTGTTGTAACGCCGTCATTTGGGCGCTCTT TGCGCCCCGAAATCGTTTGTTTCGCAGTCGTGGCGGCGATCAGCACCGTC CTTGGCGGCCCTCAGGGAAGACGAGAGTGCCTTGTGGGGAGCGGGGGGCA GGGACGGCGCTCGCTGGGAGGGGGACCAGTCGTCTGCGGAGGTGAACGGA TTCAACGCCAGGATGGCTGAGGTCTTCGACGAGCAGCACTTCATTTCCCC AACCTTCAGGTGCGGTCGTCGGAGAGTACAGCAAACACAGCAGTGATTTA TTTGGTGGAAATGGCCACATTCTCGTATCGTATGTATGATCGGCTTGTGT GTGGCGTGTTCCGTTACGTTGGTGTTGTGTCGGGATTGGTTGGTCGAGTC GGGGGCTCCGCGCGCGCCATGCTCGCCGACCGGGGGGGGTACTACCTACA TATCTGCTGTGGTTGTGTTTTTTTCTCCTCCTCGTGACGTTTGCCGCGGT TGTTGTCTGATGTCAAGTATGTATGTGCGAGTGCGGCGGCATCCACCGTG GTTTGTCGAGTAAACCAGTTTTCCCCGCGAACTGCTACACTTCGTGTGGT CTGTAACAACTCTTCCTAGGTGCTACAGTAGTATGTACCTAGAAGCACGT CAAAGTTGTGACAACTTCTCGCGGACCACGAAACATGTGCGCATTCCACG ACGTGATGAAAAATCACTCGACCTTTGTCGCCGGAGAGGCAACCAGCAAT ACTATTTCACATATCAGCGGGGCACACCATACACAAAAACACGTGGGTTG GCCAACCCGGCTCGTCATCGTTATATCTCATGCCTGCTTTCGATCGCTGA GACGCACGTGTGTTGAGCATTACTAGACGATTTGGGATTCAGGAAGTCTG ACGCGTGTGTGGCCGGTCTCGTTTACACTACGACCAAAACTCGAACGCGA CCAAAATAAAGGTACAACTTCATGCACGCGCCGACGATGGCTCTTCCCGG GGTGATGTTCACCCTCCGGGAGGTGCGCTCTCCTCCCAAGACGCCGACGG TGGACGAGATCTACGAGTTTATTAAGACACTCTTCAACAAGGCGCAGCTC AGCAGCGAGTGCTCCCTGGTCTGCCTCATCTACGTCGAGCGGCTGATGGA GACGGCGCACGTTCCCCTGCTAGCCGGCACGTGGAAGCCCGTCCTTCTGT GCGGCCTTCTCCTGGCGTCCAAGGTGCGCGCGTTGCTGCTGCGTTTTGTT GTGTCTCGGGAGTCTTTATTTTTGCGGCACTCCTTCTTAGCGCTGGTTTT TGAAAGGTAAATCAGATATCAAAAACGGAACCTAGCCCACATTTGAGACG GGGCTCCGTGGAGTTCAATCGGTATTTCATATCTATGGTGACATAATATA CCGTACAGGTAGGTGACACAAGATACCACACCCCCTAGACCGATTTTTAA AGCTCCATTACTCCGCAACGAAGAGGGTGCCAGCACTTAAACGACACGTT TTCGGACAGCCCTCGTCTACATATTTCCAACACCACCCTTTTCTTTCGGC ACGGGCAGTGTTCTGCTGGGGAGGAATCGAGCTTTGGAAATATGTCCAGG GGGTGTGGTATCTTGTGTCACCTACGGTAGTGAAGTAATAGTATTAGTCC ATCCGAGTAGAAAAACACCTATGTAAAATGTACGAAGAATTCAATATCTC CCCTGCAGATTCGTTACAGGATGCCTGTCGCGTTGCCGAAGAACCAATGG TCGAAAGCGAGGTTGCGAATGAGTGCTATATTGCTGCGAAATACCCCAGC GAAACATCGTCTCTTCTCTCTCCTCTCTCTTGTGGAACAACAAAAATAAC GCACCACGTGCGAACAATATATTGGATGACTAATTGTGTACCAGGAACCC TTCTGTGTGACCACGTTTCAGTACTCTGGCAATATTTCCTCGTGACAAGG AGCCTATGGAGCATTGGAAAATCAACGTTAAGAAGAATAAACCACCTAAG ATACAAAATTAAGCATTTTTTTTTTCATGTTTTGCGTTGCGCACGGTCGA TCAGGTGTGGCAGGACCTCAGCAGCTGGAACGTGGAGTTCTCGACGGTCT ACCCGGAGTATTCTCTCAAGAGCATCAACAGGCTTGAGCTGCTGTTCCTG GGGGCGATGAAGTGGGACATGTCGATCTCGAGCAGCCTGTACGCCAAGTA TTACTTCGCCCTCCGCTCCCTAACCGAGAAGGAAGACTTCCGCCGACGGT ACAACCGCGTCCTCAAGGTGAGAAAGAGCCGGAAGGTAAAAACGATGTAG GTACGAAAAGGTTTGTAGTGAGTGAGTGCCCTTTGCCCGTGTTGACGGTC AGGGTTTTTTGCTATTTAGCCTGTATTTTTGTAAACCTTGGACTCGGGAT AGTGCTGCTTGCCCCTGGGCCTGTTTCGAAGGGGCTTGTTGTCCTTTTGT TCCAACCAGAACTCTTGTCAAACAACATGCCACGCCATGCCACCCCACCC CACTTGTCGAACTGAATGAAGATTTTCATGAATCGAGACGTTCTTATGGG TTATTTAAACATAAACAATGAATCAAAGATGGAACCTACCCCACACTAGA GCAAGGGCTCGATATGGGGTTCAAACGGTATTCCATTACAGTGACGTAAT ATTTGGCGAAGCGAGCAGAAAAACAACCTAAATATCAGAAGAGTTCAACA TCTCCCCTGCAAAGATTTAAAGATTTGCGAGGTCGGCCAACAAGTATTCA GGCGGGTAGATGCCCGGTTATTTGTTTACTCACCGCTGCTCGTATGGTGT GTTTGCCCCCGGCCCTGGCAGATCGACGCGCCGCGGTCTAGCATGGTGGC CGCAAGGGCGGCTGTTGTGAAAAGAGAGGTACTCCACACGCAGTCGGAGG TGTGCATGCTCTCCAAGAGCCTTTAATCGCAGAGTCTCGCTCGAGTCTGC GGTGGAGGCGCCTACAAAATATTTCCCAAAGCAACAGGCATCGAAGGTGG TGTGGACGCCCTCTTCGAAGAGCAAGAAGAGTCGTTAGATGAGTCTCTTC ATCTCATGCTGAGGGCGTAGTAGGCGACAGGCCAAAACGCCATCAGCTGT GCAATAATACTGCGATACATGCGGTGGCTTGGACCTGTTTTCGTTTCAGC TCTGCTGTGTGCGGTGCAAGCCAGTGCCTGCGCGGATGGCTGGAACCTAC AGCAGCGAACAGCGGTGCGACCGATACTTGCTGTGGTAATTCGAGCTAAG CGCCGCTGTATTTTTTTTGTTTTAATCGAGGGTTGTGTGCTACTTTAACT GGGACAACTGTTGTAGTCGTTTAGTGGGACTACCAGCTCGCCATGGCGGG GAGCGGTAGCTTGTGGTGTGTGCGGGTGTGTGGTGTGTTGTGTTTCTGGT TACCATGTCACCTGTTTTCTGAGACGCTTTGCGTCGTTATTTTGTTTTGG AATTGATGCCGTCGCGCCATGGAGAATGTCGAATTGTGTCGGAGACCTCG CGAGTGTGGAGGGTGGTAACCGATCAGAGTGATCACTCAATCGTGATTTT TTTATGCACGCATTCACTCGTGCGCCCTCGGCAGCTTCGATAGGTAGATT TTGTCTCAGATGCAGAAGCGTTTCGCTTGCTTGGTGCCTCAGGGGGGGAG TAGAATTGACGCGTTTCTCAAGTAAGCCTGCGAGGGGATGCATGGAGGGG TTGGTGTCTGAACTTTTTATACCTGCCGTTTCTTGTTCCTTGTTTTTTGA TTCGACGTACGTAGTTGTGCGTCTTTTTACGTGGGGTTGAGGAGCTAATT TATCAAACGAGCGGGTGGGGTCGGGGAGGATCACTCCCAGGAGCCGATGA GGCGCGCAGAGTGGGTGGAATGGTTCTCGCATGTTTCGGTTTCGGTTCGG GAACACGGGGGGCGGGAAGTTGTGGTACATACAAATACAAGGTGGTGTTT TTTGAGTCGCAAGCGTGAGGCGGGGTTGGGGTCTTCAACTGCATTTGGGG CTGGTGTCGGTTTCTGCGCGTTGGGGAGCAATTTTCATGGGAACTGAGGG CTGT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1385:137..9440+

>mRNA_L-elsbetiae_contig1385.2902.1 ID=mRNA_L-elsbetiae_contig1385.2902.1|Name=mRNA_L-elsbetiae_contig1385.2902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3312bp|location=Sequence derived from alignment at L-elsbetiae_contig1385:137..9440+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTCCATCAGACTACGGTATTGGTGGTCGAGGAATGATACGAGATGA
GGTGGTCGTGGTGGGGAGTGATGGATCATCGCATGAGCGGTTTTCGGGCA
GCACGGCGCTGACCGCCGACGAGGGCAAGGGCAAGGGAGCGCATGGCCAC
GACAGAAAGAAGGGCGATAACAGCAGACAAGAAGACAAGGCTAACGTCTT
CACCGGTATCATCGACTTCTTCGCCGGCCTCGGCAAAAACAAAAACAAGC
CAGCTGCTGCCTCCGATGCCGACCGAACGCCTTTGACCGCGTACGAGAGC
GAACTCGGAGAGGAGTCAGAGTTACACGATAACCTAGGGCCGCTCCTAGA
TCCCCGATGGAGTATCTACCCTCCCGTAGCCGGGGTGAAGCAGAGGCGAG
GCGTGTCCCAGCCCGTGGCAATCAAACGAGCACCCGGGACGCGGGCGCGA
GCGCCTCGACTACCTGAACCGGCGGATGGTTCAAGTGGAAATGGGGAGGC
GGATGGCCAAGGAGAACGGGAGGAAGAAGGAGACGGGGAGCAAGCCGGCG
ACGATGCGGAGAGCAAGATCAAGGCGTGGCAGCGACGGCGGATGTCAGCG
AAGAGGGAGTCTTTCACGATGGCTCCATCAGACTACGGTATTGGTGGTCG
AGGAATGATACGAGATGAGGTGGTCGTGGTGGGGAGTGATGGATCATCGC
ATGAGCGGTTTTCGGGCAGCACGGCGCTGACCGCCGACGAGGGCAAGGGC
AAGGGAGCGCATGGCCACGACAGAAAGAAGGGCGATAACAGCAGACAAGA
AGACAAGGCTAACGTCTTCACCGGTATCATCGACTTCTTCGCCGGCCTCG
GCAAAAACAAAAACAAGCCAGCTGCTGCCTCCGATGCCGACCGAACGCCT
TTGACCGCGTACGAGAGCGAACTCGGAGAGGAGTCAGAGTTACACGATAA
CCTAGGGCCGCTCCTAGATCCCCGATGGAGTATCTACCCTCCCGTAGCCG
GGGTGAAGCAGAGGCGAGGCGTGTCCCAGCCCGTGGCAATCAAACGAGCA
CCCGGGACGCGGGCGCGAGCGCCTCGACTACCTGAACCGGCGGATGGTTC
AAGTGGAAATGGGGAGGCGGATGGCCAAGGAGAACGGGAGGAAGAAGGAG
ACGGGGAGCAAGCCGGCGACGATGCGGAGAGCAAGATCAAGGCGTGGCAG
CGACGGCGGATGTCAGCGAAGAGGGAGTCTTTCACGGAGGAAACGTTCGT
GCCGTGCTACGCGACGTTGACCTCAAACATGTCGACGGAGTCTTTCCAGG
AGATGAAGTACAAGGCCCCTTCGACAAGGGTGTCCAGCGCCGTAGCACCG
CCGAGCTCGGTCGCTCGACCAAACTACCACGACGCGCTGCGGAGAGGAGG
AAACGTTCGTGCCGTGCTACGCGACGTTGACCTCAAACATGTCGACGGAG
TCTTTCCAGGAGATGAAGTACAAGGCCCCTTCGACAAGGGTGTCCAGCGC
CGTAGCACCGCCGAGCTCGGTCGCTCGACCAAACTACCACGACGCGCTGC
GGAGAGTTGCGGTTGTGGTGTACCAGCACATTAAGACGTGCCAATGGAAG
CGCCAGGCGGCAGAGCAGAGGGAGAAGATGATGGCGGAGGCGGCGGGGGT
CGGCCCTGTCAAGCAAATGAAGTTGCGGTTGTGGTGTACCAGCACATTAA
GACGTGCCAATGGAAGCGCCAGGCGGCAGAGCAGAGGGAGAAGATGATGG
CGGAGGCGGCGGGGGTCGGCCCTGTCAAGCAAATGAAGTCGTGGCGGCGA
TCAGCACCGTCCTTGGCGGCCCTCAGGGAAGACGAGAGTGCCTTGTGGGG
AGCGGGGGGCAGGGACGGCGCTCGCTGGGAGGGGGACCAGTCGTCTGCGG
AGGTGAACGGATTCAACGCCAGGATGGCTGAGGTCTTCGACGAGCAGCAC
TTCATTTCCCCAACCTTCAGTCGTGGCGGCGATCAGCACCGTCCTTGGCG
GCCCTCAGGGAAGACGAGAGTGCCTTGTGGGGAGCGGGGGGCAGGGACGG
CGCTCGCTGGGAGGGGGACCAGTCGTCTGCGGAGGTGAACGGATTCAACG
CCAGGATGGCTGAGGTCTTCGACGAGCAGCACTTCATTTCCCCAACCTTC
AGGTACAACTTCATGCACGCGCCGACGATGGCTCTTCCCGGGGTGATGTT
CACCCTCCGGGAGGTGCGCTCTCCTCCCAAGACGCCGACGGTGGACGAGA
TCTACGAGTTTATTAAGACACTCTTCAACAAGGCGCAGCTCAGCAGCGAG
TGCTCCCTGGTCTGCCTCATCTACGTCGAGCGGCTGATGGAGACGGCGCA
CGTTCCCCTGCTAGCCGGCACGTGGAAGCCCGTCCTTCTGTGCGGCCTTC
TCCTGGCGTCCAAGGTACAACTTCATGCACGCGCCGACGATGGCTCTTCC
CGGGGTGATGTTCACCCTCCGGGAGGTGCGCTCTCCTCCCAAGACGCCGA
CGGTGGACGAGATCTACGAGTTTATTAAGACACTCTTCAACAAGGCGCAG
CTCAGCAGCGAGTGCTCCCTGGTCTGCCTCATCTACGTCGAGCGGCTGAT
GGAGACGGCGCACGTTCCCCTGCTAGCCGGCACGTGGAAGCCCGTCCTTC
TGTGCGGCCTTCTCCTGGCGTCCAAGGTGTGGCAGGACCTCAGCAGCTGG
AACGTGGAGTTCTCGACGGTCTACCCGGAGTATTCTCTCAAGAGCATCAA
CAGGCTTGAGCTGCTGTTCCTGGGGGCGATGAAGTGGGACATGTCGATCT
CGAGCAGCCTGTACGCCAAGTATTACTTCGCCCTCCGCTCCCTAACCGAG
AAGGAAGACTTCCGCCGACGGTACAACCGCGTCCTCAAGGTGTGGCAGGA
CCTCAGCAGCTGGAACGTGGAGTTCTCGACGGTCTACCCGGAGTATTCTC
TCAAGAGCATCAACAGGCTTGAGCTGCTGTTCCTGGGGGCGATGAAGTGG
GACATGTCGATCTCGAGCAGCCTGTACGCCAAGTATTACTTCGCCCTCCG
CTCCCTAACCGAGAAGGAAGACTTCCGCCGACGGTACAACCGCGTCCTCA
AGATCGACGCGCCGCGGTCTAGCATGGTGGCCGCAAGGGCGGCTGTTGTG
AAAAGAGAGGTACTCCACACGCAGTCGGAGGTGTGCATGCTCTCCAAGAG
CCTTTAAATCGACGCGCCGCGGTCTAGCATGGTGGCCGCAAGGGCGGCTG
TTGTGAAAAGAGAGGTACTCCACACGCAGTCGGAGGTGTGCATGCTCTCC
AAGAGCCTTTAA
back to top