mRNA_L-elsbetiae_contig13840.2900.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.090e-63 Identity = 139/264 (52.65%), Postives = 173/264 (65.53%), Query Frame = 1 Query: 58 GLTPLHVAARRGYGNTAQALLTAGADVNLQSELYGGVSALAYAAWNGHVDVVIRIIEHGAVHVNAAGSSNGRTAVHLAATHNRSEVIAVLAEAGANIELDNSTTGDTPLYAATRRFNVVAIRALLKLGAMVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMMGSKVEEEDSLAEEVERVRKLLANAPADRA*RRRGFLILCRSHFPGGRVQLGHRSSRTHATSIPKKKCSREEPSRAEVEWAGV 849 G TPLH+ A G AQALL AGADV L+ G +S+ HG VNA +NG TA+ +A+ +++ I VL EAGANIE G TPL+ A++ + A ALL+ GA V K+N+ +TPLH AA AG G+AE+V+LLLRRGADE A + NG TAADM+ K EE DSLAE+V+RVRKLLA APADRA RRRGFLIL R+H+PGGRVQ GHR+S+ A + K+ S EEPSRAE++WAGV Sbjct: 490 GCTPLHLVAMAGRAAAAQALLDAGADVALRQNGVG-LSSXXXXXXXXXXXXXXXXXXHGG-DVNAK-VNNGITALRVASAFDKAPAIDVLTEAGANIEAQ--ANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGV 748
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 136 bits (343), Expect = 2.120e-33 Identity = 97/249 (38.96%), Postives = 145/249 (58.23%), Query Frame = 1 Query: 4 VTTLCLKGVDDVDVRNG---HGLTPLHVAARRGYGNTAQALLTAGADVNLQSELYG-GVSALAYAAWNGHVDVVIRIIEHGAVHVNAAGSSNGRTAVHLAATHNRSEVIAVLAEAGANIELDNSTTGDTPLYAATRRFNVVAIRALLKLGAMVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMMGSKVEEEDSLA--EEVERVRKLLANAPADRA*RRRGFLILCRSHF 732 V TL +G +NG G TPLH+A G+ +T +ALL A D ++ ++ S L +AA G V+ I++HG V+ ++G T++H+AA +NR I VL EAGA++E+++ L A + + A+ AL K GA + ++ G+TPL AA AG+ G +V++LLR GADE A +G TAA+++G +E +++ERVR LL NAPADRA RRRG L+LCR+ + Sbjct: 103 VATLLAEGAK----KNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHG---VDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAAL-ALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFW 343
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 129 bits (323), Expect = 3.680e-31 Identity = 99/204 (48.53%), Postives = 120/204 (58.82%), Query Frame = 1 Query: 130 ADVNLQSELYGG--VSALAYAAWNGHVDVVIRIIEHGAVHVNAAGSSNGRTAVHLAATHNRSEVIAVLAEAGANIELDNSTTGDTPLYAA--TR-RFNVVAIRALLKLGAMVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMMGSKVEEEDSLAEEVERVRKLLANAPADRA*RRRGFLILCRS 726 AD+N + YG +SAL A GHVD + +IEHGA V+A + G A+H A +N+ E + VL AGAN S +G T L+ A TR R + LLK GA V+ Q G + L A AGK G EVV+LLLR GADE NG AAD +G KV EED + EE E VRKLLANAPADRA RRR L+LCR+ Sbjct: 150 ADINRR---YGDREISALDIGAGEGHVDFIRTLIEHGA-DVDAT-NYGGVAALHHATANNKVEAMDVLLRAGANAR-SMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRA 347
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 117 bits (293), Expect = 3.720e-26 Identity = 102/291 (35.05%), Postives = 147/291 (50.52%), Query Frame = 1 Query: 1 VVTTLCLKGVDDVDVRNGHGLTPLHVAARRGYGNTAQALLTAGADVNLQSE--LYGGVSALAYAAWNGHVDVVIRIIEHGAVHVNAAGSSNGRTAVHLAATHNR-SEVIAVLAEAGANIELDNSTT--GDTPLYAATRRFNVVAIRALLKLGAMVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMM----------------------GSKVEEEDSLAEEVERVRKLLANAPADRA*RRRGFLILCRSHFPGGR--VQLGHRSSRTHATS 786 VV+TL + DVD + G++PL VA+ G+ +T +ALL AGAD+NL+ + G++A+ A GHV V+ I+E+G +V A + G TA+H H R ++ + VL +AGA++ G TPL + A+ ALLK G V+ N G + LH + G +V+LLLR GA E A NG T +D++ G DSL +E++R R LLA APADR RRR +L++ R+ GR G S RT A + Sbjct: 187 VVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGG-NVRAT-DTYGLTALH----HARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSR-GMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEAAT 470
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 107 bits (268), Expect = 2.730e-23 Identity = 76/192 (39.58%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 196 GHVDVVIRIIEHGAVHVNAAGSSNGRTAVHLAATHNRSEVIAVLAEAGANIELDN---STTGDTPLYAATRRFNVVAIRALLKLGAMVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMMGSKVEEEDSLAEEVERVRKLLANAPADRA*RRRGFLILCRSHFPGGRVQLGHR 762 GHV V+ +EHG + A ++G TA+H AA N++E + VL EAGA+ ++++ S DTPL AA + A+R LL+ GA +K + G PLH AA H G EVV+LLLR GA E A +G T A++ EE LLA APADRA RRRG++++ R+ R+ R Sbjct: 178 GHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAA-HEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARSETERIAAQRR 368
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 101 bits (251), Expect = 7.220e-21 Identity = 63/118 (53.39%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 475 TPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMMGSKVEEEDSLAEEVERVRKLLANAPADRA*RRRGFLILCRSHFPGGRVQLGHRSSRTHATSIPKKKCSREEPSRA 828 TPL A AG+ G+AEVV LLR GADE G A DM+G VEEED L E+VERVR+LLANAPADRA RRRG+LI+CR+ RV +S TH T++ ++ SR + +RA Sbjct: 245 TPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQ--PDRVPERRMTSGTHYTNVARRTRSRAKMARA 360
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 2.340e-17 Identity = 84/246 (34.15%), Postives = 113/246 (45.93%), Query Frame = 1 Query: 58 GLTPLHVAARRGYGNTAQALLTAGADVNLQSELYGGVSALAYAAWNGHVDVVIRIIEHGAVHVNAAGSSNGRTAVHLAATHNRSEVIAVLAEAGANIE-----LDNSTTGDTPLYAATRRFNVVAIRALLKLGAMVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMMGSKVEEEDSLAEEVERVRKLLANAPADRA*RRRGFLILCRS------HFPGGRVQLGHR 762 G TPL VAA +G+ T + LL AGADV+++ Y S A G + ++ +H AA HNR + +AVL +AGANI LDN A+ ALL GA V ++ +G T LH A HA + V+ LLR GA E+A N ET D + E E++R +LLA APADRA RRRG+L++ H G R + G + Sbjct: 206 GYTPLMVAAEQGHVATVKVLLAAGADVDVREVDY---SCSAXXXXXXXXXXXXXXXXXXXXXXANEGVIDDQSPLHWAAGHNRPDCVAVLLDAGANINGRCNFLDNHXXXXXXXXXXXXE----ALLALLSRGARVDEKTDDGSTALHLAG-HARGYKVDDTVDTLLRWGASEQAVDENDETPVDRLTEVAREVVWEWPELDRALELLARAPADRAWRRRGWLVMLHERTKKERHVRGDRPRKGEK 443
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: A0A6H5JZY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY3_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 4.320e-17 Identity = 86/257 (33.46%), Postives = 126/257 (49.03%), Query Frame = 1 Query: 34 DVDVRNGHGLTPLHVAARRGYGNT-AQALLTAGADVNLQSELYGGVSALAYAAWNGHVDVVIRIIEHGA---VHVNAAGSSNGRTAVHLAATHNRSEVIAVLAEAGANIELDNSTTGD---TPLYAATRR--FNVVAIRALLKLGAMVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMMGSKVEEEDSLAE---EVERVRKLLANAPADRA*RRRGFLILCRSHFPGGRVQLGHRSS 768 D + R+ G +PLH+AA+ GYG A + G +E L A GH + ++ GA V NG A HN + + G D+ TGD TPL+ A R ++ RA+L+ GA V+ +N TPLH A + S VVELLL GADEK +N + AD++G + + + E + +R+R++LA APADR+ RRRG+L+L R+ +P R+Q+ R S Sbjct: 53 DPNPRDQVGFSPLHIAAKAGYGRVDAYTRILLGQGAQAHAETVFQDIPLHLATSQGHALGISELVLGGADKDVDDGNGSEVNGSDYQGHTALHNATVI------EGPGPGQDDQATGDRCYTPLHVAVDRRIASIGTTRAVLERGANVNARNDNDLTPLHVACS----WSSLAVVELLLLWGADEKLTGDNRVSPADIIGVSLLDGSNSQEIQADHQRIRQMLARAPADRSWRRRGWLVLSRA-YPT-RMQIAKRKS 297
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 5.740e-17 Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 1 Query: 253 AGSSNGRTAVHLAATHNRSEVIAVLAEAGANIELDNSTTGDTPLYAAT-RRFNVVAIRALLKLGAMVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMMGSKVEEEDSL-AEEVERVRKLLANAPADRA*RRRGFLILCRSHFPGGRVQ 750 AG + A+HLA N+ + + VL EAGA+I+ +S + TPL+ A+ ++ +V + AA++AG+ GSAE+V+LLLRRGADE NG+ AD +G +E D L EV V +LLANAPADRA RRRG L+LCR+ R++ Sbjct: 189 AGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQ-GHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLR 355
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 2.040e-16 Identity = 85/244 (34.84%), Postives = 118/244 (48.36%), Query Frame = 1 Query: 1 VVTTLCLKGVDDVDVRNGHGLTPLHVAARRGYGNTAQALLTAGADVNLQSELYGGVSALAYAAWNGHVDVVIRIIEHGAVHVNAAGSSNGRTAVHLAATHNRSEVIAVLAEAGANIELDNSTTG-DTPLYAATR-RFNVVAIRALLKLGAMVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAADMMGSKVEEEDSLAEEVERVRKLLANAPADRA*RRRGFLILCRS 726 VV L D D+ + GL+PL VA++RG+ +T + LL AGADV++++ G ++ VNA S +G TA+H N++ + VL +AGA ++D G TPL A +V A+ LL+ G VS KT LH A G +V+LLLR G E G T A ++ A EVER LLANAPADRA RRR +L++ R+ Sbjct: 185 VVAVLTDMPSTDKDILDKSGLSPLTVASQRGHLSTVKTLLNAGADVSMRT---GHRNSXXXXXXXXXXXXXXXXXXXXXXXVNA--SKHGYTALHAGCAMNQAGAMDVLLDAGA--DMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVS--GPMDKTMLHLACMTMAP-GFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRA 418 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13840.2900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13840.2900.1 >prot_L-elsbetiae_contig13840.2900.1 ID=prot_L-elsbetiae_contig13840.2900.1|Name=mRNA_L-elsbetiae_contig13840.2900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=83bp MVSKQNSEGKTPLHCAAAHAGKLGSAEVVELLLRRGADEKANTNNGETAAback to top mRNA from alignment at L-elsbetiae_contig13840:3218..4067+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13840.2900.1 ID=mRNA_L-elsbetiae_contig13840.2900.1|Name=mRNA_L-elsbetiae_contig13840.2900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=850bp|location=Sequence derived from alignment at L-elsbetiae_contig13840:3218..4067+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13840:3218..4067+ >mRNA_L-elsbetiae_contig13840.2900.1 ID=mRNA_L-elsbetiae_contig13840.2900.1|Name=mRNA_L-elsbetiae_contig13840.2900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=498bp|location=Sequence derived from alignment at L-elsbetiae_contig13840:3218..4067+ (Laminarionema elsbetiae ELsaHSoW15)back to top |