mRNA_L-elsbetiae_contig13804.2878.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: D7FWV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV9_ECTSI) HSP 1 Score: 497 bits (1280), Expect = 5.040e-167 Identity = 248/311 (79.74%), Postives = 278/311 (89.39%), Query Frame = 1 Query: 1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFKKSLHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYVVAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDGICRFE 933 +VFVTFES LSQARCLSHMSRGILD PEEQHMYTNPDGFK +LHVMPASPA+EVLYENLHIG I R AAQ +LTF LT +V+++++ A+ L+ +G+ ATAL ITVVDV+LP LVRL C +E+HHN V+HDLSVMNKLTLARWANL IPF+LN+RL TLT NLELVVTVLWLNAFVP +RLLD RGRWSRSV A KEV+Q+AMDSH EGSRFHLS+RYTDTTKT+FACLAYAPVLPIAMW+ LLSL+LSYW+DKWLF+KAWRTPQPPGNSGRVARLARRHLALAVLAHCV ALYYYAGWPFD ICRF+ Sbjct: 466 KVFVTFESDLSQARCLSHMSRGILDAPEEQHMYTNPDGFKTALHVMPASPASEVLYENLHIGAIHRIAAQ-VLTFVLTTMIVIISFLAARELEAIGVVATALVITVVDVVLPPLVRLICSVEKHHNSVSHDLSVMNKLTLARWANLAGIPFWLNDRLGTLTESNLELVVTVLWLNAFVPTFIRLLDIRGRWSRSVLAKKEVLQAAMDSHLEGSRFHLSDRYTDTTKTVFACLAYAPVLPIAMWIGLLSLSLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFD 775
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A6H5JJI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI5_9PHAE) HSP 1 Score: 495 bits (1274), Expect = 1.460e-162 Identity = 252/320 (78.75%), Postives = 279/320 (87.19%), Query Frame = 1 Query: 1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDG---------FKKSLHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYVVAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDGICRFE 933 +VFVTFES LSQARCLSHMSRGILDTPEEQHMYTNPDG FK +LHVMPASPA+EVLYENLHIG I R AAQ +LTF LT +V++++V A+ L+TVG+ ATAL ITVVDV+LP LVRL C +E+HHN ++HDLSVMNKLTLARWANL IPF+LN+RL TLT NLELVVTVLWLNAFVP +RLLD RGRWSRSV A KEV+Q+AMDSH EGSRFHLS+RYTD TKT+FACLAYAPVLPIAMW+ LLSLALSYW+DKWLF+KAWRTPQPPGNSGRVARLARRHLALAVLAHCV ALYYYAGWPFD ICRFE Sbjct: 445 KVFVTFESDLSQARCLSHMSRGILDTPEEQHMYTNPDGKKNTPNMSRFKTALHVMPASPASEVLYENLHIGAIHRIAAQ-VLTFVLTTMIVIISFVAARELETVGVVATALVITVVDVVLPPLVRLICSVEKHHNSISHDLSVMNKLTLARWANLAGIPFWLNDRLGTLTENNLELVVTVLWLNAFVPTLIRLLDIRGRWSRSVLAKKEVLQAAMDSHLEGSRFHLSDRYTDMTKTVFACLAYAPVLPIAMWIGLLSLALSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFE 763
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A7S2V6J7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6J7_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.930e-35 Identity = 93/311 (29.90%), Postives = 169/311 (54.34%), Query Frame = 1 Query: 1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFK----KSLHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYV-VAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDG 918 +V+V F++ Q L ++ G + P + T D +K L V A +EVL+ENL + + + AQ +++ LT ++ AY+ + A ++ AT L ++V++VLLP ++R+ +E+H + S+ K T AR+ N I F + + TL A ++ ++++L +A + P V L+D G R + + ++ +F+G+ ++L ERYT +KT+F + YA + P +W+ L A +YWADK+L ++ W+ +PP ++A AR H+ ++L H ++ ++Y GWPFD Sbjct: 314 KVYVIFQTEEGQRNALEALTTGAI--PAAFEISTVEDKYKFRGTNVLSVEEAVEPSEVLWENLELS-VWYSLAQSLVSLVLTALLIYWAYLAIYAAKKSAKSTATGLVVSVINVLLPIVLRMITMVEKHVDQGNKQDSLFLKTTAARFMNTAIINFMITDFHDTLDAAAIKTIMSILISDAIITPTVGLIDISGNLKRLFLSKFAKTHAKLEKNFQGTPWNLGERYTGMSKTLFVAMFYAALFPPGLWVAALCFAYTYWADKYLLLRVWQ--KPPQYDAQLAIQARGHIMFSLLVHLLITAHWYYGWPFDN 619
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A835YVZ1_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ1_9STRA) HSP 1 Score: 129 bits (325), Expect = 8.080e-30 Identity = 99/318 (31.13%), Postives = 163/318 (51.26%), Query Frame = 1 Query: 1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFKKSLHVM----PASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVV----LAYVVAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDG-ICR 927 +V+VTFE Q CL M+ GI+ +E+ P+ + +V+ PA PA EV + R +Q +T A+T ++ L Y+ +KA + A+ I+VV+ +LP L++L E H S++ K+ + +W N I + + LT G ++ + + +V P + LLD GR SR V + Q M+S+F GS + L+ERY KT F L ++ + P ++ L+L ++YW +K+ ++ W TP P G +A+L+R +LALAVL ++ L +YA WPFD +C+ Sbjct: 362 KVYVTFEHEKDQRECLQAMTTGIIAATQERSTKVKPEHRFRGSNVLKIEEPAEPA-EVNWLTQDSTFFYRLI-EQGVTLAITAGIIAVLAALIYLTSKADNALA----AIFISVVNKVLPILIKLVVRKEHHLTDSGLQSSLLLKIVILQWMNTAFIIYIITPSDEFLTRGFIDQISN----DVYVSPVIMLLDIPGRLSRLVLSRTAHNQLKMNSYFIGSPWFLAERYASMLKTAFVALFFSALFPAGYFIAALALFVTYWVNKYCLLRLWATPPPMGAF--LAQLSRSYLALAVLVKLLVTLNFYANWPFDNELCK 667
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A835YQN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN9_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.070e-19 Identity = 82/311 (26.37%), Postives = 143/311 (45.98%), Query Frame = 1 Query: 1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFKKS---LHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYVVAKALQTVGLWATALSI--TVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDG 918 +V+ F + +Q CL +S G L + + LH E+++ +L + P + A Q + LT AVV +Y V A+ A+ L+I T+++ LP+ L+ ++ ++M KL R+ N I +F TL+ L V +++ +AF+ PA+ ++DA R+ R V + Q M+S+F GS + L ERYT KT+ L YA + P + +++ D++ ++ WR+ P ++A A + +L H ++ +YAGWPFD Sbjct: 380 RVYCVFNTEAAQRNCLHQLSTGKLKARWDYANGAQAAALSFNGNILHAQEPPEPGEIVWHSLQV-PNRARALQSLAATLLTGAVVAGSYWVFYAIMHDNADASGLAIVVTLINAALPTACYAINALQSFYDHGDRQGALMAKLIATRFMNTALISYFTTPPGETLSYTRLMAVQSLMVSDAFITPALAIVDAVPRFYRRVLSRASTTQRLMNSYFLGSAWDLGERYTSMLKTVIVALFYAAIYPAGCFFASFCFLATFFIDRYKLVREWRSA--PAYDAQLAWRAHNVIIGCILLHLLVTSSWYAGWPFDN 687
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A8J2WY22_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY22_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 6.540e-17 Identity = 81/308 (26.30%), Postives = 147/308 (47.73%), Query Frame = 1 Query: 1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHM----YTNPDGFKKS-LHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYVVAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDL-SVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGW 906 +V+VTFE+ L +++ P+ F+ L+V +E+L+ H+ +R + ++F LT A+VV Y V+ + + AL +T V+ LP ++ + H D S+ KL L+RWAN V F R L+A L V+++L ++AF+ P +R+ D + R V ++ Q M++ + G+ ++++ERYTD KT+ L YA +P + + +L S++ D + ++ W P +++R A +AL V H ++A Y++ W Sbjct: 405 RVYVTFETEAGMEHALETFETSGFRRMVSKYLGWESENTPEAFENVVLNVSRPVEPSEILWHTSHVRRSERWV-RLTVSFGLTAALVVGVYYVSINIDDAN--SLALWVTFVNSALPVFLKAMQLMVEVHREYGDDQDSMFLKLLLSRWANTVIAAFIAYGRRSRLSATALSGVMSILLMDAFLLPVLRVFDVYDLFMRYVVGPRQPSQQDMNALWSGADWNIAERYTDIMKTLGVGLFYAAAVPYGLLVTAAALLTSFFVDHYCLLRLWAWK--PDFDDQISRRAIGCIALLVFVHVLVAQYFFQNW 707
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A485KVH9_9STRA (Aste57867_11946 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVH9_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.440e-6 Identity = 31/103 (30.10%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 595 KEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAG 903 K+ Q +++ + G F L+ RY+ T+F L ++ +P+ + + L S+ ++YW DK+ F++ R +PP G +AR A L AVL H + ++ Y+ Sbjct: 975 KQETQRDLEALYRGPEFDLATRYSVVINTIFITLLFSSGMPLMLLIGLFSMIVTYWTDKFTFLRVVR--RPPEYDGEIARAAGNLLPWAVLLHSLFGIWMYSN 1075
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A6G0X577_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X577_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.300e-6 Identity = 31/110 (28.18%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 595 KEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWP-FDGI 921 ++ Q +++ + G F L+ RY+ T+F L ++ +P+ + + L S+ ++YW DK+ F++ R+P P G++A A L A+L H + ++ Y+ FD I Sbjct: 517 RQDTQRDLEALYRGPEFDLASRYSVVMNTLFITLLFSSGMPLMLLIGLFSMIITYWTDKFTFLRVVRSP--PQYDGKIATAAGNLLPWAILLHALFGIWMYSNTQIFDAI 624
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A833TGL1_PHYIN (Calcium-activated chloride channel n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TGL1_PHYIN) HSP 1 Score: 59.7 bits (143), Expect = 3.420e-6 Identity = 45/171 (26.32%), Postives = 83/171 (48.54%), Query Frame = 1 Query: 421 ARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDGICRFE 933 A W N V + +LT+ + V +L N F+ A R +D + S+ K+ Q +++ + G +F L+ RY + ++F ++ +P+ ++ ++ ++YWADK+ F++ R+P P ++A A L AVL HC++A+ W F FE Sbjct: 900 ANWYNDVGVAL-----MLTMILNSFSTHVYLL-ANYFILKAWRFIDRGYSFDHSL--TKQDTQRDLEALYRGPKFDLAARYAQSLTSIFITYMFSAGMPLLHFIGFGAMFMTYWADKFTFLRIARSP--PLYDSKLATAAGALLPYAVLMHCLMAM-----WMFSNDRIFE 1055
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A8K1CTK3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTK3_PYTOL) HSP 1 Score: 57.8 bits (138), Expect = 1.440e-5 Identity = 54/242 (22.31%), Postives = 109/242 (45.04%), Query Frame = 1 Query: 319 VDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERL---------------------LTLTAG-----NLELVVTVLWLNAFVP-----------PAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDGICRFE 933 +++LL ++ + +E+HH +S + K+ LA++ N + +N L L+ G + +++T++ +N + P A RL+D RG +S + K+ Q +++ + G +F L+ RY + ++F ++ +PI + + + ++YWADK+ F++ R+P P +VA A L AV+ H ++A+ W F F+ Sbjct: 800 INILLARILNVLVTMEKHHTHSGQVVSHVVKVFLAQFCNTAILVVIINANLNYFFENKTIGFESFPILNGKYADLSPGWYNDVGVSIILTMI-VNTYSPHIYVIFDYVRLEAKRLMD-RG-FSFNYSLTKQDTQHDLEALYRGPKFDLASRYAQSLTSVFITYLFSAGMPILHLVGFMEMMMTYWADKFTFLRIARSP--PLYDAKVATAAGSLLPYAVILHSLMAM-----WMFSNALIFQ 1031 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13804.2878.1 >prot_L-elsbetiae_contig13804.2878.1 ID=prot_L-elsbetiae_contig13804.2878.1|Name=mRNA_L-elsbetiae_contig13804.2878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=311bp QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFKKSLHVMPASPback to top mRNA from alignment at L-elsbetiae_contig13804:515..4408+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13804.2878.1 ID=mRNA_L-elsbetiae_contig13804.2878.1|Name=mRNA_L-elsbetiae_contig13804.2878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3894bp|location=Sequence derived from alignment at L-elsbetiae_contig13804:515..4408+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13804:515..4408+ >mRNA_L-elsbetiae_contig13804.2878.1 ID=mRNA_L-elsbetiae_contig13804.2878.1|Name=mRNA_L-elsbetiae_contig13804.2878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1866bp|location=Sequence derived from alignment at L-elsbetiae_contig13804:515..4408+ (Laminarionema elsbetiae ELsaHSoW15)back to top |