mRNA_L-elsbetiae_contig13804.2878.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13804.2878.1
Unique NamemRNA_L-elsbetiae_contig13804.2878.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: D7FWV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV9_ECTSI)

HSP 1 Score: 497 bits (1280), Expect = 5.040e-167
Identity = 248/311 (79.74%), Postives = 278/311 (89.39%), Query Frame = 1
Query:    1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFKKSLHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYVVAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDGICRFE 933
            +VFVTFES LSQARCLSHMSRGILD PEEQHMYTNPDGFK +LHVMPASPA+EVLYENLHIG I R AAQ +LTF LT  +V+++++ A+ L+ +G+ ATAL ITVVDV+LP LVRL C +E+HHN V+HDLSVMNKLTLARWANL  IPF+LN+RL TLT  NLELVVTVLWLNAFVP  +RLLD RGRWSRSV A KEV+Q+AMDSH EGSRFHLS+RYTDTTKT+FACLAYAPVLPIAMW+ LLSL+LSYW+DKWLF+KAWRTPQPPGNSGRVARLARRHLALAVLAHCV ALYYYAGWPFD ICRF+
Sbjct:  466 KVFVTFESDLSQARCLSHMSRGILDAPEEQHMYTNPDGFKTALHVMPASPASEVLYENLHIGAIHRIAAQ-VLTFVLTTMIVIISFLAARELEAIGVVATALVITVVDVVLPPLVRLICSVEKHHNSVSHDLSVMNKLTLARWANLAGIPFWLNDRLGTLTESNLELVVTVLWLNAFVPTFIRLLDIRGRWSRSVLAKKEVLQAAMDSHLEGSRFHLSDRYTDTTKTVFACLAYAPVLPIAMWIGLLSLSLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFD 775          
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A6H5JJI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI5_9PHAE)

HSP 1 Score: 495 bits (1274), Expect = 1.460e-162
Identity = 252/320 (78.75%), Postives = 279/320 (87.19%), Query Frame = 1
Query:    1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDG---------FKKSLHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYVVAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDGICRFE 933
            +VFVTFES LSQARCLSHMSRGILDTPEEQHMYTNPDG         FK +LHVMPASPA+EVLYENLHIG I R AAQ +LTF LT  +V++++V A+ L+TVG+ ATAL ITVVDV+LP LVRL C +E+HHN ++HDLSVMNKLTLARWANL  IPF+LN+RL TLT  NLELVVTVLWLNAFVP  +RLLD RGRWSRSV A KEV+Q+AMDSH EGSRFHLS+RYTD TKT+FACLAYAPVLPIAMW+ LLSLALSYW+DKWLF+KAWRTPQPPGNSGRVARLARRHLALAVLAHCV ALYYYAGWPFD ICRFE
Sbjct:  445 KVFVTFESDLSQARCLSHMSRGILDTPEEQHMYTNPDGKKNTPNMSRFKTALHVMPASPASEVLYENLHIGAIHRIAAQ-VLTFVLTTMIVIISFVAARELETVGVVATALVITVVDVVLPPLVRLICSVEKHHNSISHDLSVMNKLTLARWANLAGIPFWLNDRLGTLTENNLELVVTVLWLNAFVPTLIRLLDIRGRWSRSVLAKKEVLQAAMDSHLEGSRFHLSDRYTDMTKTVFACLAYAPVLPIAMWIGLLSLALSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFE 763          
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A7S2V6J7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6J7_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.930e-35
Identity = 93/311 (29.90%), Postives = 169/311 (54.34%), Query Frame = 1
Query:    1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFK----KSLHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYV-VAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDG 918
            +V+V F++   Q   L  ++ G +  P    + T  D +K      L V  A   +EVL+ENL +  +  + AQ +++  LT  ++  AY+ +  A ++    AT L ++V++VLLP ++R+   +E+H +      S+  K T AR+ N   I F + +   TL A  ++ ++++L  +A + P V L+D  G   R   +      + ++ +F+G+ ++L ERYT  +KT+F  + YA + P  +W+  L  A +YWADK+L ++ W+  +PP    ++A  AR H+  ++L H ++  ++Y GWPFD 
Sbjct:  314 KVYVIFQTEEGQRNALEALTTGAI--PAAFEISTVEDKYKFRGTNVLSVEEAVEPSEVLWENLELS-VWYSLAQSLVSLVLTALLIYWAYLAIYAAKKSAKSTATGLVVSVINVLLPIVLRMITMVEKHVDQGNKQDSLFLKTTAARFMNTAIINFMITDFHDTLDAAAIKTIMSILISDAIITPTVGLIDISGNLKRLFLSKFAKTHAKLEKNFQGTPWNLGERYTGMSKTLFVAMFYAALFPPGLWVAALCFAYTYWADKYLLLRVWQ--KPPQYDAQLAIQARGHIMFSLLVHLLITAHWYYGWPFDN 619          
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A835YVZ1_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ1_9STRA)

HSP 1 Score: 129 bits (325), Expect = 8.080e-30
Identity = 99/318 (31.13%), Postives = 163/318 (51.26%), Query Frame = 1
Query:    1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFKKSLHVM----PASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVV----LAYVVAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDG-ICR 927
            +V+VTFE    Q  CL  M+ GI+   +E+     P+   +  +V+    PA PA EV +         R   +Q +T A+T  ++     L Y+ +KA   +     A+ I+VV+ +LP L++L    E H        S++ K+ + +W N   I + +      LT G ++ +      + +V P + LLD  GR SR V +     Q  M+S+F GS + L+ERY    KT F  L ++ + P   ++  L+L ++YW +K+  ++ W TP P G    +A+L+R +LALAVL   ++ L +YA WPFD  +C+
Sbjct:  362 KVYVTFEHEKDQRECLQAMTTGIIAATQERSTKVKPEHRFRGSNVLKIEEPAEPA-EVNWLTQDSTFFYRLI-EQGVTLAITAGIIAVLAALIYLTSKADNALA----AIFISVVNKVLPILIKLVVRKEHHLTDSGLQSSLLLKIVILQWMNTAFIIYIITPSDEFLTRGFIDQISN----DVYVSPVIMLLDIPGRLSRLVLSRTAHNQLKMNSYFIGSPWFLAERYASMLKTAFVALFFSALFPAGYFIAALALFVTYWVNKYCLLRLWATPPPMGAF--LAQLSRSYLALAVLVKLLVTLNFYANWPFDNELCK 667          
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A835YQN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.070e-19
Identity = 82/311 (26.37%), Postives = 143/311 (45.98%), Query Frame = 1
Query:    1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFKKS---LHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYVVAKALQTVGLWATALSI--TVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDG 918
            +V+  F +  +Q  CL  +S G L    +            +   LH        E+++ +L + P +  A Q +    LT AVV  +Y V  A+      A+ L+I  T+++  LP+       L+  ++      ++M KL   R+ N   I +F      TL+   L  V +++  +AF+ PA+ ++DA  R+ R V +     Q  M+S+F GS + L ERYT   KT+   L YA + P   +        +++ D++  ++ WR+   P    ++A  A   +   +L H ++   +YAGWPFD 
Sbjct:  380 RVYCVFNTEAAQRNCLHQLSTGKLKARWDYANGAQAAALSFNGNILHAQEPPEPGEIVWHSLQV-PNRARALQSLAATLLTGAVVAGSYWVFYAIMHDNADASGLAIVVTLINAALPTACYAINALQSFYDHGDRQGALMAKLIATRFMNTALISYFTTPPGETLSYTRLMAVQSLMVSDAFITPALAIVDAVPRFYRRVLSRASTTQRLMNSYFLGSAWDLGERYTSMLKTVIVALFYAAIYPAGCFFASFCFLATFFIDRYKLVREWRSA--PAYDAQLAWRAHNVIIGCILLHLLVTSSWYAGWPFDN 687          
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A8J2WY22_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY22_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 6.540e-17
Identity = 81/308 (26.30%), Postives = 147/308 (47.73%), Query Frame = 1
Query:    1 QVFVTFESYLSQARCLSHMSRGILDTPEEQHM----YTNPDGFKKS-LHVMPASPAAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYVVAKALQTVGLWATALSITVVDVLLPSLVRLFCCLERHHNVVTHDL-SVMNKLTLARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGW 906
            +V+VTFE+       L             +++       P+ F+   L+V      +E+L+   H+   +R   +  ++F LT A+VV  Y V+  +      + AL +T V+  LP  ++    +   H     D  S+  KL L+RWAN V   F    R   L+A  L  V+++L ++AF+ P +R+ D    + R V   ++  Q  M++ + G+ ++++ERYTD  KT+   L YA  +P  + +   +L  S++ D +  ++ W     P    +++R A   +AL V  H ++A Y++  W
Sbjct:  405 RVYVTFETEAGMEHALETFETSGFRRMVSKYLGWESENTPEAFENVVLNVSRPVEPSEILWHTSHVRRSERWV-RLTVSFGLTAALVVGVYYVSINIDDAN--SLALWVTFVNSALPVFLKAMQLMVEVHREYGDDQDSMFLKLLLSRWANTVIAAFIAYGRRSRLSATALSGVMSILLMDAFLLPVLRVFDVYDLFMRYVVGPRQPSQQDMNALWSGADWNIAERYTDIMKTLGVGLFYAAAVPYGLLVTAAALLTSFFVDHYCLLRLWAWK--PDFDDQISRRAIGCIALLVFVHVLVAQYFFQNW 707          
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A485KVH9_9STRA (Aste57867_11946 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVH9_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.440e-6
Identity = 31/103 (30.10%), Postives = 57/103 (55.34%), Query Frame = 1
Query:  595 KEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAG 903
            K+  Q  +++ + G  F L+ RY+    T+F  L ++  +P+ + + L S+ ++YW DK+ F++  R  +PP   G +AR A   L  AVL H +  ++ Y+ 
Sbjct:  975 KQETQRDLEALYRGPEFDLATRYSVVINTIFITLLFSSGMPLMLLIGLFSMIVTYWTDKFTFLRVVR--RPPEYDGEIARAAGNLLPWAVLLHSLFGIWMYSN 1075          
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A6G0X577_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X577_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.300e-6
Identity = 31/110 (28.18%), Postives = 60/110 (54.55%), Query Frame = 1
Query:  595 KEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWP-FDGI 921
            ++  Q  +++ + G  F L+ RY+    T+F  L ++  +P+ + + L S+ ++YW DK+ F++  R+P  P   G++A  A   L  A+L H +  ++ Y+    FD I
Sbjct:  517 RQDTQRDLEALYRGPEFDLASRYSVVMNTLFITLLFSSGMPLMLLIGLFSMIITYWTDKFTFLRVVRSP--PQYDGKIATAAGNLLPWAILLHALFGIWMYSNTQIFDAI 624          
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A833TGL1_PHYIN (Calcium-activated chloride channel n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TGL1_PHYIN)

HSP 1 Score: 59.7 bits (143), Expect = 3.420e-6
Identity = 45/171 (26.32%), Postives = 83/171 (48.54%), Query Frame = 1
Query:  421 ARWANLVAIPFFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDGICRFE 933
            A W N V +       +LT+   +    V +L  N F+  A R +D    +  S+   K+  Q  +++ + G +F L+ RY  +  ++F    ++  +P+  ++   ++ ++YWADK+ F++  R+P  P    ++A  A   L  AVL HC++A+     W F     FE
Sbjct:  900 ANWYNDVGVAL-----MLTMILNSFSTHVYLL-ANYFILKAWRFIDRGYSFDHSL--TKQDTQRDLEALYRGPKFDLAARYAQSLTSIFITYMFSAGMPLLHFIGFGAMFMTYWADKFTFLRIARSP--PLYDSKLATAAGALLPYAVLMHCLMAM-----WMFSNDRIFE 1055          
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Match: A0A8K1CTK3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTK3_PYTOL)

HSP 1 Score: 57.8 bits (138), Expect = 1.440e-5
Identity = 54/242 (22.31%), Postives = 109/242 (45.04%), Query Frame = 1
Query:  319 VDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIPFFLNERL---------------------LTLTAG-----NLELVVTVLWLNAFVP-----------PAVRLLDARGRWSRSVRANKEVVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLALSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYAGWPFDGICRFE 933
            +++LL  ++ +   +E+HH      +S + K+ LA++ N   +   +N  L                       L+ G      + +++T++ +N + P            A RL+D RG +S +    K+  Q  +++ + G +F L+ RY  +  ++F    ++  +PI   +  + + ++YWADK+ F++  R+P  P    +VA  A   L  AV+ H ++A+     W F     F+
Sbjct:  800 INILLARILNVLVTMEKHHTHSGQVVSHVVKVFLAQFCNTAILVVIINANLNYFFENKTIGFESFPILNGKYADLSPGWYNDVGVSIILTMI-VNTYSPHIYVIFDYVRLEAKRLMD-RG-FSFNYSLTKQDTQHDLEALYRGPKFDLASRYAQSLTSVFITYLFSAGMPILHLVGFMEMMMTYWADKFTFLRIARSP--PLYDAKVATAAGSLLPYAVILHSLMAM-----WMFSNALIFQ 1031          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13804.2878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FWV9_ECTSI5.040e-16779.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJI5_9PHAE1.460e-16278.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V6J7_9STRA1.930e-3529.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YVZ1_9STRA8.080e-3031.13PPIase cyclophilin-type domain-containing protein ... [more]
A0A835YQN9_9STRA1.070e-1926.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2WY22_9STRA6.540e-1726.30Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A485KVH9_9STRA1.440e-630.10Aste57867_11946 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0X577_9STRA2.300e-628.18Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A833TGL1_PHYIN3.420e-626.32Calcium-activated chloride channel n=1 Tax=Phytoph... [more]
A0A8K1CTK3_PYTOL1.440e-522.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13804contigL-elsbetiae_contig13804:515..4408 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score498.0
Seed ortholog evalue3.1e-138
Seed eggNOG ortholog2880.D7FWV9
Hectar predicted targeting categoryother localisation
EggNOG OGs28PFW@1,2QW3U@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size933
Cds size933
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13804.2878.1prot_L-elsbetiae_contig13804.2878.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13804 515..4408 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815541.574803-CDS-L-elsbetiae_contig13804:514..6261622815541.574803-CDS-L-elsbetiae_contig13804:514..626Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 515..626 +
1691682949.1937158-CDS-L-elsbetiae_contig13804:514..6261691682949.1937158-CDS-L-elsbetiae_contig13804:514..626Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 515..626 +
1622815541.5852838-CDS-L-elsbetiae_contig13804:1078..11761622815541.5852838-CDS-L-elsbetiae_contig13804:1078..1176Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 1079..1176 +
1691682949.2050815-CDS-L-elsbetiae_contig13804:1078..11761691682949.2050815-CDS-L-elsbetiae_contig13804:1078..1176Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 1079..1176 +
1622815541.5960004-CDS-L-elsbetiae_contig13804:1843..20441622815541.5960004-CDS-L-elsbetiae_contig13804:1843..2044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 1844..2044 +
1691682949.219001-CDS-L-elsbetiae_contig13804:1843..20441691682949.219001-CDS-L-elsbetiae_contig13804:1843..2044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 1844..2044 +
1622815541.6061974-CDS-L-elsbetiae_contig13804:2648..28061622815541.6061974-CDS-L-elsbetiae_contig13804:2648..2806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 2649..2806 +
1691682949.2303298-CDS-L-elsbetiae_contig13804:2648..28061691682949.2303298-CDS-L-elsbetiae_contig13804:2648..2806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 2649..2806 +
1622815541.6187108-CDS-L-elsbetiae_contig13804:3632..37221622815541.6187108-CDS-L-elsbetiae_contig13804:3632..3722Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 3633..3722 +
1691682949.2385933-CDS-L-elsbetiae_contig13804:3632..37221691682949.2385933-CDS-L-elsbetiae_contig13804:3632..3722Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 3633..3722 +
1622815541.6326318-CDS-L-elsbetiae_contig13804:4134..44081622815541.6326318-CDS-L-elsbetiae_contig13804:4134..4408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 4135..4408 +
1691682949.2468286-CDS-L-elsbetiae_contig13804:4134..44081691682949.2468286-CDS-L-elsbetiae_contig13804:4134..4408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13804 4135..4408 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13804.2878.1

>prot_L-elsbetiae_contig13804.2878.1 ID=prot_L-elsbetiae_contig13804.2878.1|Name=mRNA_L-elsbetiae_contig13804.2878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=311bp
QVFVTFESYLSQARCLSHMSRGILDTPEEQHMYTNPDGFKKSLHVMPASP
AAEVLYENLHIGPIQRAAAQQMLTFALTVAVVVLAYVVAKALQTVGLWAT
ALSITVVDVLLPSLVRLFCCLERHHNVVTHDLSVMNKLTLARWANLVAIP
FFLNERLLTLTAGNLELVVTVLWLNAFVPPAVRLLDARGRWSRSVRANKE
VVQSAMDSHFEGSRFHLSERYTDTTKTMFACLAYAPVLPIAMWLCLLSLA
LSYWADKWLFMKAWRTPQPPGNSGRVARLARRHLALAVLAHCVLALYYYA
GWPFDGICRFE
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mRNA from alignment at L-elsbetiae_contig13804:515..4408+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13804.2878.1 ID=mRNA_L-elsbetiae_contig13804.2878.1|Name=mRNA_L-elsbetiae_contig13804.2878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3894bp|location=Sequence derived from alignment at L-elsbetiae_contig13804:515..4408+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTTTTTGTAACCTTCGAGTCGTACCTCAGCCAGGCCCGCTGCCTGTC CCACATGAGCCGCGGGATCCTCGATACGCCTGAGGAGCAGCACATGTACA CCAACCCGGACGGTAAGGCTGTGTAGCGAAAAGGTGGAAGTTTTTTTTTC ATTGTATGTATTTTTAGCGGGGCGAGCGGGGCGTGTGTTTGGTCGGCCCC CGGAGTCGTCTCTGCCGGTTTGGATCAGCCTGAGCGCTGTTGGTGTATAG ACAGAGGAACGATTTATTCCCCCCGCAAATAAATGTATGTGCTGTGCAGA AGATCACCGTTGAACTGTATCGTACCAGTCAGATCAGCAACAGCAGAGCA TATATATAGGACGGGTCGTTTTTTTTTGTCGACACCAACACTCATGGCGG CGAGAGACCTGGAGTCGTCGGCAGCGGTTGCGGGGGGGTATGCGGTTGCG ATTGATCGCTCACTTGCCGGAAAAAAAAACAATCTCAAAAAAATATTGCG CTGTCTTCGTGTGTGTGTTTCGGCCCTCCCGTTTGTGCGCACGCCCCGTA CACGCGACGGGCAGGCTTCAAGAAGTCCCTGCACGTCATGCCCGCATCGC CTGCTGCGGAGGTGCTCTACGAGAACCTTCACATCGGCCCAATCCAGCGG GCCGCGGCGCAGGTGATTTTGCGGTTGACATTTTATTTTTTATTTTTTCC TCCCATTATGTTACTGGCATCATTCGTCGTCTGCCCCCACTGGACCCCAT ACTCCACTACGACTATTTAGCTAAACGACCCAACCGGGGTCACATTAGAG GGGGGGGGGGACCCCCTTCCTGCGGTGCCTGCCCGCTATGTTTTTATCGT GAGCAGGGTTCAGCACTCCCCATTGCATGCATGTACCCTCCCTCCCCCAC CCATCACCCACCGGCTACGATGGCACCTGTTGTTTTGGAGCTGCGTAGCG GTCGCCACGGCCCCTTTTCTATCGCTCGCCTGTTGACTTTTTCCTTGGTG TGGCTCATCGCTTCACTGGAGCCATCGACTGCACTACCCTAGATGGACTG GACTGGACTAGACTAGACTAGACTAGATGGTACCCGCCGCCTCGTTCACT TCTGTGTTCCCCCCTTCACCTCCGTTACCCTCGCTGATTTTGCTTCCGCT GCATTATGGCGCCTGTCCATCTGCTGCTGCTGCTTCTGCCGCGGCCGCTG TTCTCTTTTGTTTTGTTTTGTTCTGTTTTCTCCGTGCCTGCCTGCCCGCG TTCGTGCGTGCGTGCGTGCGTGTATTTCGTGCTTCTTTGTTTTTTTTGGG GGGGTGGGGGTTGGCGGGATGGGGGAGAGCAGATGCTGACGTTTGCCCTA ACGGTGGCCGTCGTAGTGCTGGCCTACGTAGTGGCGAAGGCGCTCCAGAC GGTGGGCTTGTGGGCGACGGCGTTGTCCATCACGGTCGTCGACGTCCTGC TGCCCTCTCTCGTGCGGCTGTTCTGCTGCCTCGAGCGGCACCACAACGTC GTCACGCACGACCTGAGCGTGATGAACAAGGTCAGTTTTATTTTATTTTA TATATTTGTGTTTTTCTCTCTCCCGCGAGGGCGAGCGAGCGCCAAATTGT ATATACCTATGTACGCGCTGTGGAGGTGCTGTTTGTGTGTCTGCTGCACG TGTAAGGCAGGGTAGGTCCTGTGCTGTGCGATTATGGAAGTGTTGGTGTG TTGTCGACGGCTGGTTTTTATTTTACCATCTTTTGGCGGGATTTTTGTTT GTCTTTGTGTTGTTGTTTCTTGCGTTAAAGAGGTTTCGCTTGAGCAAGCT CGACCAATGAGACGCCATTCATGGACCCGACCACTGCATTTTGGTCTGCT ACTGTTGTGTTGGACCCGGAGTCGATGTCGTTCGTGTGTGCCGTCCATGT GTTTGTGTTTTCATATCGCCAAAACTAGTTTTTACCACTCGCCGCGCTAC ATATATAGCCGGCTGCCCGATCAATAGATGTCTAATATATGCCGGCCAAA ACCTATCACACGCCCCCCATTCCCCCCCCCACTCCATCTCGTTTTCTCTC TCTCTCTCTTCCTCTTCCTCTCTTAACTCTCTCTTCCTCTCTATCTCCCT CTTTCTCTCTGTGTGTGTGTGTGTTTTTGCGCAGCTTACCCTTGCTCGCT GGGCCAACCTGGTGGCGATCCCGTTCTTCCTGAACGAGCGCCTGCTGACG CTCACCGCGGGCAACCTGGAGCTGGTCGTGACGGTGCTGTGGCTCAACGC CTTCGTCCCGCCCGCCGTCCGCCTGCTCGACGCCCGCGGAAGGTATTGGA AAACGTAGAGAGTGTGCGTGTGCGGTATTGAACACTACTGATGTGGACTC GCAAGACGTGTGTGTGTACGTAAGCGCGTGTTTTTTTGTGTTCCTATGTC GTTATTTGGACTCGCAAGACGTGTGTGGGTACGTGTGCGCGTGTTTGTTT GTGTTACTATGTCGTTATTTATCTCGACCGCGCTGTGTAAAATGATGGAC GGATAAAGGGTCTGCTGTTTCGCGGGTTCAGTTTAACAAAAACGTCCCGA AGTGCGCCTTTGTCTGGTGTGCGCATGGGTGTGTGTGTGTGTGTGTGTGT GTCTGTGTGTTTCTATCTAGTGTGTTTAGTTTGTGTGCGTGTTTTCTCGG GGTCATTTCCTCGTTGTTTTGATAGAATCGACCCCGTTGGTTCTCCGGCC CAAATGCTCCGTATATGCCATACATCAAGTTAGTATCAGCAAGACGGACA AACTAAAGTTCAAACGTTGCCATCCAGTGGTGCTGTTTGTGAGTTAGCTC TTGGGAACGACGACGTTTCTCGCGTCTGGCGTCTCGCGTCTCTATCGGAC CTCAAAATACTTGTCGGCAAAAATTCAAAAGTTGCCACCCAGTGCTGTGT TTGAGTTATGTAGCTCTTGAGAACGACAACGTTTCTCGCGTCTCGCGTCT CGCGTCTCGCGTCTCGCGTCTCTATCGGACCTCAAAATACTTGTCGGCAA CAATTCAAACATTGCCACCCAGTGCTGTGTTTGAGTTATGTAGCTCTTGA GAACGCCGACGTTTCTCGCGTCTGGCGTCTGGCGTCTCTATCGGATCTCG AAATACTTTGCGGGACAGGTGGAGCAGGAGCGTCCGCGCCAATAAGGAGG TGGTCCAGTCGGCGATGGACTCTCACTTCGAGGGGTCTCGCTTCCACCTC TCGGAAAGGTGGGCACGAATAAGGCAGGCAGCAAGCGCGTTGCGTTGAGA GCGGTCTGGCAGGGAGAAGGAACTATGAGTGGGCGGGCGGGGGTTAAGTG AAGCAGTTATCTGTTGAAACACCACCGTTCACACCTCTTCCCAAAGGGTA CACGTGCTCCGGATGAATCCCAGCTGCATAAATATGTATGTACTCCAGTG CATCCTTATTCGTCCCGGCCTGTCCTTGCAGAGCCTCAACAACCCAGCAC AGATAAATACAGCCCAAATACGACCTTTAACTCAAAGCTCCTCACCTTTG CCACCATGGCTACCGCAACGCCGCCACCACCACCACCACCACCACCACCA CCACCACCCGCACACGCGCGTACCGCCGCCGCCGCCGCCGCCGTGAACAA AAAAAAAACGAACACTCCAGGTACACGGACACGACGAAGACGATGTTCGC CTGCCTGGCTTACGCCCCCGTCCTCCCGATCGCGATGTGGCTCTGCCTGC TCTCCCTGGCGCTGTCCTACTGGGCCGACAAGTGGCTCTTCATGAAGGCG TGGCGGACCCCGCAGCCCCCCGGGAACAGCGGCCGCGTGGCGCGGCTGGC GAGGAGGCACCTGGCGCTGGCAGTGCTGGCGCACTGCGTGCTGGCGCTGT ACTACTACGCCGGCTGGCCGTTCGACGGCATCTGCCGCTTCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13804:515..4408+

>mRNA_L-elsbetiae_contig13804.2878.1 ID=mRNA_L-elsbetiae_contig13804.2878.1|Name=mRNA_L-elsbetiae_contig13804.2878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1866bp|location=Sequence derived from alignment at L-elsbetiae_contig13804:515..4408+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTTTTTGTAACCTTCGAGTCGTACCTCAGCCAGGCCCGCTGCCTGTC
CCACATGAGCCGCGGGATCCTCGATACGCCTGAGGAGCAGCACATGTACA
CCAACCCGGACGCAGGTTTTTGTAACCTTCGAGTCGTACCTCAGCCAGGC
CCGCTGCCTGTCCCACATGAGCCGCGGGATCCTCGATACGCCTGAGGAGC
AGCACATGTACACCAACCCGGACGGCTTCAAGAAGTCCCTGCACGTCATG
CCCGCATCGCCTGCTGCGGAGGTGCTCTACGAGAACCTTCACATCGGCCC
AATCCAGCGGGCCGCGGCGCAGGCTTCAAGAAGTCCCTGCACGTCATGCC
CGCATCGCCTGCTGCGGAGGTGCTCTACGAGAACCTTCACATCGGCCCAA
TCCAGCGGGCCGCGGCGCAGCAGATGCTGACGTTTGCCCTAACGGTGGCC
GTCGTAGTGCTGGCCTACGTAGTGGCGAAGGCGCTCCAGACGGTGGGCTT
GTGGGCGACGGCGTTGTCCATCACGGTCGTCGACGTCCTGCTGCCCTCTC
TCGTGCGGCTGTTCTGCTGCCTCGAGCGGCACCACAACGTCGTCACGCAC
GACCTGAGCGTGATGAACAAGCAGATGCTGACGTTTGCCCTAACGGTGGC
CGTCGTAGTGCTGGCCTACGTAGTGGCGAAGGCGCTCCAGACGGTGGGCT
TGTGGGCGACGGCGTTGTCCATCACGGTCGTCGACGTCCTGCTGCCCTCT
CTCGTGCGGCTGTTCTGCTGCCTCGAGCGGCACCACAACGTCGTCACGCA
CGACCTGAGCGTGATGAACAAGCTTACCCTTGCTCGCTGGGCCAACCTGG
TGGCGATCCCGTTCTTCCTGAACGAGCGCCTGCTGACGCTCACCGCGGGC
AACCTGGAGCTGGTCGTGACGGTGCTGTGGCTCAACGCCTTCGTCCCGCC
CGCCGTCCGCCTGCTCGACGCCCGCGGAAGCTTACCCTTGCTCGCTGGGC
CAACCTGGTGGCGATCCCGTTCTTCCTGAACGAGCGCCTGCTGACGCTCA
CCGCGGGCAACCTGGAGCTGGTCGTGACGGTGCTGTGGCTCAACGCCTTC
GTCCCGCCCGCCGTCCGCCTGCTCGACGCCCGCGGAAGGTGGAGCAGGAG
CGTCCGCGCCAATAAGGAGGTGGTCCAGTCGGCGATGGACTCTCACTTCG
AGGGGTCTCGCTTCCACCTCTCGGAAAGGTGGAGCAGGAGCGTCCGCGCC
AATAAGGAGGTGGTCCAGTCGGCGATGGACTCTCACTTCGAGGGGTCTCG
CTTCCACCTCTCGGAAAGGTACACGGACACGACGAAGACGATGTTCGCCT
GCCTGGCTTACGCCCCCGTCCTCCCGATCGCGATGTGGCTCTGCCTGCTC
TCCCTGGCGCTGTCCTACTGGGCCGACAAGTGGCTCTTCATGAAGGCGTG
GCGGACCCCGCAGCCCCCCGGGAACAGCGGCCGCGTGGCGCGGCTGGCGA
GGAGGCACCTGGCGCTGGCAGTGCTGGCGCACTGCGTGCTGGCGCTGTAC
TACTACGCCGGCTGGCCGTTCGACGGCATCTGCCGCTTCGAGGTACACGG
ACACGACGAAGACGATGTTCGCCTGCCTGGCTTACGCCCCCGTCCTCCCG
ATCGCGATGTGGCTCTGCCTGCTCTCCCTGGCGCTGTCCTACTGGGCCGA
CAAGTGGCTCTTCATGAAGGCGTGGCGGACCCCGCAGCCCCCCGGGAACA
GCGGCCGCGTGGCGCGGCTGGCGAGGAGGCACCTGGCGCTGGCAGTGCTG
GCGCACTGCGTGCTGGCGCTGTACTACTACGCCGGCTGGCCGTTCGACGG
CATCTGCCGCTTCGAG
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