mRNA_L-elsbetiae_contig13736.2839.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: D7FHR9_ECTSI (Oxidoreductase, NAD-binding, myo-inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR9_ECTSI) HSP 1 Score: 233 bits (593), Expect = 7.540e-74 Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 1 Query: 13 GIIGAGRIGQVHLDTLASVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 372 GIIGAGRIGQVHLDTLASVPGV PVIISDVVEPVLK+VTEKYGVPKYT++GMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR Sbjct: 30 GIIGAGRIGQVHLDTLASVPGVKPVIISDVVEPVLKVVTEKYGVPKYTLEGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 149
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: A0A835Z516_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z516_9STRA) HSP 1 Score: 208 bits (529), Expect = 3.550e-64 Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 1 Query: 13 GIIGAGRIGQVHLDTLASVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 372 GIIGAGRIG+VHL+TLASVPGV PVIISDVVE VLK VT YGVPKYTMD EVI+ PDVEAVWICSPSQFHADQIK AKAGKHIFCEKPIATDLAGTIEA++VAKDCGVKLMTAFQRR Sbjct: 31 GIIGAGRIGRVHLETLASVPGVQPVIISDVVESVLKDVTATYGVPKYTMDANEVIHHPDVEAVWICSPSQFHADQIKTCAKAGKHIFCEKPIATDLAGTIEAIKVAKDCGVKLMTAFQRR 150
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: W7TS07_9STRA (Oxidoreductase domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TS07_9STRA) HSP 1 Score: 197 bits (502), Expect = 7.740e-63 Identity = 96/124 (77.42%), Postives = 109/124 (87.90%), Query Frame = 1 Query: 1 TASAGIIGAGRIGQVHLDTLASVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 372 T G+IGAGRIG+VHL+TLA VPGV PVI+SDVVEPVLK VT +YGVP YT+DG EVIN PDV+AVWICSPSQFHADQIK AKAGKH+FCEKPIATDL GTIEA++VA + G+KLMTAFQR+ Sbjct: 27 TLKVGVIGAGRIGRVHLETLAGVPGVQPVILSDVVEPVLKEVTAQYGVPNYTLDGDEVINHPDVQAVWICSPSQFHADQIKKCAKAGKHVFCEKPIATDLNGTIEAIKVADEAGIKLMTAFQRQ 150
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: A0A4D9CRG6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRG6_9STRA) HSP 1 Score: 199 bits (506), Expect = 8.500e-61 Identity = 97/124 (78.23%), Postives = 109/124 (87.90%), Query Frame = 1 Query: 1 TASAGIIGAGRIGQVHLDTLASVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 372 T G+IGAGRIG+VHL+TLA VPGV PVI+SDVVEPVLK VT +YGVP YT+DG EVIN PDV+AVWICSPSQFHADQIK AKAGKH+FCEKPIATDL GTIEA++VA + G+KLMTAFQRR Sbjct: 27 TLKVGVIGAGRIGRVHLETLAGVPGVQPVILSDVVEPVLKEVTAQYGVPNYTLDGDEVINHPDVQAVWICSPSQFHADQIKKCAKAGKHVFCEKPIATDLNGTIEAIKVADEAGIKLMTAFQRR 150
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: A0A835Z446_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z446_9STRA) HSP 1 Score: 200 bits (509), Expect = 8.640e-61 Identity = 100/124 (80.65%), Postives = 109/124 (87.90%), Query Frame = 1 Query: 1 TASAGIIGAGRIGQVHLDTLASVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 372 T GIIGAGRIG+VHLDTLASVPGV P+IISD+VE VLK VTE YGVP Y+++ +VIN PDV+AVWICSPSQFHADQIKA A AGKHIFCEKPIATDLAGTIEA+Q A DCGVKLMTAFQRR Sbjct: 44 TLKVGIIGAGRIGRVHLDTLASVPGVKPIIISDIVESVLKDVTETYGVPAYSLNPDDVINHPDVQAVWICSPSQFHADQIKACAAAGKHIFCEKPIATDLAGTIEAIQYANDCGVKLMTAFQRR 167
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: A0A835Z9N2_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N2_9STRA) HSP 1 Score: 194 bits (494), Expect = 5.560e-59 Identity = 95/120 (79.17%), Postives = 109/120 (90.83%), Query Frame = 1 Query: 13 GIIGAGRIGQVHLDTLASVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 372 GIIGAGRIG+VHL+TLASV GV P+IISD+VEPVL+ V YG+P Y+++ +VIN PDV+AVWICSPSQFHADQIKA A+AGKHIFCEKPIATDLAGT+EA+QVAKDCGVKLMTAFQRR Sbjct: 17 GIIGAGRIGRVHLETLASVAGVKPLIISDIVEPVLQDVVATYGLPAYSLNPDDVINHPDVQAVWICSPSQFHADQIKACARAGKHIFCEKPIATDLAGTLEAIQVAKDCGVKLMTAFQRR 136
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: A0A7S2ZK78_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZK78_9RHOD) HSP 1 Score: 160 bits (405), Expect = 5.170e-48 Identity = 79/121 (65.29%), Postives = 95/121 (78.51%), Query Frame = 1 Query: 13 GIIGAGRIGQVHLDTLA-SVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 372 G++G GRIGQVHL+TL +VP NPV++ D E K EKYGV +YT++ E+I+ DV+AVWIC+PSQFHADQIK +A GKHIFCEKPIATDL GT+EAV+ AK GVKLMTAFQRR Sbjct: 17 GVLGCGRIGQVHLETLCYNVPEANPVMVMDAFESAAKSAVEKYGVERYTLNDEELISSKDVDAVWICTPSQFHADQIKMAASHGKHIFCEKPIATDLKGTLEAVEFAKSKGVKLMTAFQRR 137
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: A0A7S0G389_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G389_9RHOD) HSP 1 Score: 161 bits (407), Expect = 1.030e-47 Identity = 80/121 (66.12%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 13 GIIGAGRIGQVHLDTLA-SVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 372 G++G GRIGQVHL+TL +VP NPV++ D E K EKYGV KYT+ E+I+ DV+AVWIC+PSQFHADQIK +A GKHIFCEKPIATDL GT+EAV+ AK GVKLMTAFQRR Sbjct: 61 GVLGCGRIGQVHLETLCYNVPEANPVMVMDAFESAAKSAVEKYGVEKYTLSDEELISSKDVDAVWICTPSQFHADQIKMAASHGKHIFCEKPIATDLKGTLEAVEFAKSKGVKLMTAFQRR 181
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: A0A7S2R4A5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4A5_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.510e-43 Identity = 78/120 (65.00%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 13 GIIGAGRIGQVHLDTLASVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQRR 372 G+IGAGRIG VHL+ LAS P PVIIS+ + +K+ +P++T D MEVIN PDVEAVWICSPS FHADQIKA A AGKH+FCEKPIATDLA T+EA+ K VKLMTA QRR Sbjct: 64 GVIGAGRIGLVHLEALASCPDARPVIISNPTVSKAEAAAKKFNLPEWTGDDMEVINHPDVEAVWICSPSNFHADQIKACAAAGKHVFCEKPIATDLAQTVEAINACKIANVKLMTALQRR 183
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Match: A0A7S2L794_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L794_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.300e-42 Identity = 70/118 (59.32%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 13 GIIGAGRIGQVHLDTLASVPGVNPVIISDVVEPVLKMVTEKYGVPKYTMDGMEVINDPDVEAVWICSPSQFHADQIKASAKAGKHIFCEKPIATDLAGTIEAVQVAKDCGVKLMTAFQ 366 G+IG GRIG VHL + PGV P+++S+ + +K+GVPK+T D M+VI DPDV+AVWICSPSQFHADQIKA A GKH+FCEKPIATDLA T+EA+ + GVKLM Q Sbjct: 80 GVIGCGRIGIVHLGAINKAPGVVPIVVSNPTVSKAEDAAKKFGVPKFTGDAMDVITDPDVDAVWICSPSQFHADQIKACAANGKHVFCEKPIATDLAETVEAINACNEAGVKLMIGLQ 197 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13736.2839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13736.2839.1 >prot_L-elsbetiae_contig13736.2839.1 ID=prot_L-elsbetiae_contig13736.2839.1|Name=mRNA_L-elsbetiae_contig13736.2839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp TASAGIIGAGRIGQVHLDTLASVPGVNPVIISDVVEPVLKMVTEKYGVPKback to top mRNA from alignment at L-elsbetiae_contig13736:1938..3780- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13736.2839.1 ID=mRNA_L-elsbetiae_contig13736.2839.1|Name=mRNA_L-elsbetiae_contig13736.2839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1843bp|location=Sequence derived from alignment at L-elsbetiae_contig13736:1938..3780- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13736:1938..3780- >mRNA_L-elsbetiae_contig13736.2839.1 ID=mRNA_L-elsbetiae_contig13736.2839.1|Name=mRNA_L-elsbetiae_contig13736.2839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig13736:1938..3780- (Laminarionema elsbetiae ELsaHSoW15)back to top |