mRNA_L-elsbetiae_contig1370.2823.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: D7FHZ6_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ6_ECTSI) HSP 1 Score: 454 bits (1167), Expect = 4.750e-150 Identity = 284/437 (64.99%), Postives = 305/437 (69.79%), Query Frame = 3 Query: 42 MGMHVIPPVDAAEQLPCACLVQPSTV-------HDRRMSLPSPAELSNIDIEIESAHTPVPLGGFSGGSPTGEVSTTPGRIQRERKHSGRCFVTLKKRGSKDVVRQTHARSASSGSID-----SCXXXXXXXXXXXXXXXXXXXXXXXSGGLYHGG-------------LEGNEPLCTAVNQPSPAPLRRASGSGSMSGS-----RGGGSFRVSAGPSVASLEDAAQRIAVDPDSGHSYFVERSTVCDACPYCDDTCEVAWCNGCDERRARLEDAHGPLIPSKVEEEANGAGGNGGGVAANAEDVVRTNGSSAGAGGSRLKLAPLLSRRYPRKSSYTLCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGGRDCEEDFHFHSRVAKKQWRQYRIGSLVPCR-GEMGAHGGDDGAERSMRTGSDCVIS 1259 MGMHV PVDA E PCACL++P + HDRRMSLPSPAELS I EIE AHTP+PLGGF GGSPTGEV TPGR RER HSG FVTLK++G +DVVRQ HARSAS+GS+ SC XXXXXXXXXXXXXXXXXXX LE NEPL PSP P RR SGSGS+ G R G SA +VASLEDAAQRIAVDPDSGHSYFVERSTVCDACPYC+DTCEVAWCNGCDE R LE+A+G L+ S E GAGG + + GGSRLKLAP+LSRRYPRKSSYTLCEVRRRK+TGACWVVSQGSVYDVT AL DHPGGKRSVL+NAGGRDC EDF FHSR AKKQWRQYRIGSLV CR G+ GG G ERSMR S CVIS Sbjct: 1 MGMHVPSPVDAGEPSPCACLIRPPSAGRQDKDRHDRRMSLPSPAELSVI--EIEDAHTPIPLGGFPGGSPTGEVIGTPGRPHRERNHSGGGFVTLKRKGVRDVVRQAHARSASAGSVGGKPAGSCRTCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCGYDERDHVHDLEANEPL----GPPSPMPFRRPSGSGSVGGRGSXXXRRGSGTPGSAAAAVASLEDAAQRIAVDPDSGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETRMHLEEAYGKLMLSAAE--VAGAGGR------HXXXXXXCETGADNGGGSRLKLAPVLSRRYPRKSSYTLCEVRRRKVTGACWVVSQGSVYDVTAALPDHPGGKRSVLKNAGGRDCAEDFFFHSRAAKKQWRQYRIGSLVACRPGQGDGDGGAAGDERSMRIASSCVIS 423
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: A0A6U3SNP3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SNP3_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.300e-17 Identity = 53/180 (29.44%), Postives = 84/180 (46.67%), Query Frame = 3 Query: 660 HSYFVERSTVCDACPYCDDTCEVAWCNGCDERRARLEDAHGPLIPSKVEEEANGAGGNGGGVAANAEDVVRTNGSSAGAGGSRLKLAPLLSRRYPRKSSYTLCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGGR-DCEEDFHFHSRVAKKQWRQYRIGSLVPCRGEMG 1196 H + + VCDACP+C DTC +C+ C ++R+R GN G+ +G +S YT+C++RR + W++ ++YD T ++ HPGG +S++R +GG+ DC ED FHS+ A K W++ ++G L C GE G Sbjct: 38 HGHLHKTKNVCDACPFCSDTCNNPFCSSCAKKRSR---------------------GN-----------KNIRGTHSG------------------ESLYTMCQLRRHNHLESAWLLVGKTIYDATPYISAHPGGVKSIIRKSGGQADCTEDMGFHSKKAIKLWKKNKVGLLCRCPGEDG 167
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: A0A2D4CIY3_PYTIN (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIY3_PYTIN) HSP 1 Score: 92.4 bits (228), Expect = 5.200e-17 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 963 LCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGGRDCEEDFHFHSRVAKKQWRQYRIGSLVPCRGEMGA 1199 LCEVR+ +CW+V+ +VYDVTG LA HP G RS+LR AGG+DC +D FHS+ A+K + IG L PC GA Sbjct: 185 LCEVRQHTTADSCWLVANNAVYDVTGVLASHPAGPRSILRKAGGKDCTQDMKFHSKTARKLLEKCFIGKLEPCGETNGA 263
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: A0A7S2Q1K2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1K2_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.250e-15 Identity = 52/180 (28.89%), Postives = 85/180 (47.22%), Query Frame = 3 Query: 660 HSYFVERSTVCDACPYCDDTCEVA-WCNGCDERRARLEDAHGPLIPSKVEEEANGAGGNGGGVAANAEDVVRTNGSSAGAGGSRLKLAPLLSRRYPR----KSSYTLCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGGR-DCEEDFHFHSRVAKKQWRQYRIGSLVPC 1181 H + CDACP C DTC+ A C C ++R NA + R + SS+ L+ + S P +++YT+C+++R + W++ ++YD T + HPGG ++LR +GG DC ED FHS A+++WR++++G+LV C Sbjct: 28 HEHNFHNHAQCDACPCCRDTCDNANSCIPCQKKR-------------------------------NATTMPRMHESSSNL---LALLSSICSGESPENNNAQNTYTMCQLKRHNHAESAWILVGDTIYDATPYIRSHPGGTETILRKSGGAADCTEDMRFHSGRAQREWRKFKVGTLVAC 173
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: A0A836GYK1_9TRYP (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Porcisia hertigi TaxID=2761500 RepID=A0A836GYK1_9TRYP) HSP 1 Score: 82.0 bits (201), Expect = 2.080e-14 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 927 LSRRYPRKSSYTLCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLVP 1178 L +R+P S E+R + W+VS GSVYDVTG L HPGG+ ++LR GG +DCE D+ FHSR A+++W ++G + P Sbjct: 11 LKKRWPVLSEE---EIRIHNTRRSLWIVSGGSVYDVTGMLGSHPGGEAAILRRGGGSKDCEVDYKFHSRYARREWDSRKVGEITP 92
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: E9ADU2_LEIMA (Cytochrome b5 heme-binding domain-containing protein n=8 Tax=Leishmania TaxID=5658 RepID=E9ADU2_LEIMA) HSP 1 Score: 78.6 bits (192), Expect = 3.330e-13 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 969 EVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLVP 1178 E+R + W+VS SVYDVTG L HPGG+ ++LR GG ++CE D+ FHSR A+++W ++G + P Sbjct: 22 EIRMHNTRRSLWIVSGNSVYDVTGVLGSHPGGEAAILRRGGGSKNCEADYTFHSRYARREWDNCKVGEITP 92
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: A0A0N1IMH0_LEPSE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1IMH0_LEPSE) HSP 1 Score: 75.9 bits (185), Expect = 3.160e-12 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 3 Query: 969 EVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLVP 1178 EVR + W+VS SVYDVT L HPGG+ ++LR GG +DCE D+ FHSR A+++W ++G + P Sbjct: 25 EVRVHNSRRSLWIVSGNSVYDVTAVLTSHPGGEAAMLRRGGGAKDCEADYTFHSRYARREWDARKVGEVTP 95
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: A4HH96_LEIBR (Cytochrome b5 heme-binding domain-containing protein n=4 Tax=Viannia TaxID=37616 RepID=A4HH96_LEIBR) HSP 1 Score: 75.5 bits (184), Expect = 3.910e-12 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 3 Query: 969 EVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLV 1175 E+R + W+VS SVYDVTG L HPGG+ ++LR GG ++CE D+ FHSR A+++W ++G + Sbjct: 22 EIRMHNTRRSLWIVSGNSVYDVTGLLGSHPGGEAAILRRGGGSKNCEADYTFHSRYARREWDNRKVGEIT 91
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: A0A836KGQ1_9TRYP (Cytochrome b5 heme-binding domain-containing protein n=5 Tax=Leishmania TaxID=5658 RepID=A0A836KGQ1_9TRYP) HSP 1 Score: 75.5 bits (184), Expect = 3.910e-12 Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 3 Query: 927 LSRRYPRKSSYTLCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLV 1175 L +R+P S E+R + W+VS SVYDVTG L HPGG+ ++LR GG ++CE D+ HSR A++QW ++G + Sbjct: 11 LKKRWPVLSEE---EIRMHNTRRSLWIVSGNSVYDVTGILGSHPGGEAAILRRGGGSKNCEADYRLHSRYARRQWDDRKVGEIT 91
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Match: A0A316U8Y9_9BASI (Putative cytochrome b5 n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316U8Y9_9BASI) HSP 1 Score: 63.2 bits (152), Expect = 8.990e-9 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 3 Query: 957 YTLCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGGRDCEEDFHFHS-RVAKKQWRQYRIGSLVP 1178 + E++ K + WVV GSVYDVT L DHPGG + +L+N G + +++HS +V K +Y+IG L P Sbjct: 5 FDAAEIKEHKSAESAWVVVDGSVYDVTEFLEDHPGGSKILLKNCGKDSSDAFWNYHSEKVLKNVAEEYKIGELKP 79 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1370.2823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1370.2823.1 >prot_L-elsbetiae_contig1370.2823.1 ID=prot_L-elsbetiae_contig1370.2823.1|Name=mRNA_L-elsbetiae_contig1370.2823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=407bp MGMHVIPPVDAAEQLPCACLVQPSTVHDRRMSLPSPAELSNIDIEIESAHback to top mRNA from alignment at L-elsbetiae_contig1370:5074..10319- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1370.2823.1 ID=mRNA_L-elsbetiae_contig1370.2823.1|Name=mRNA_L-elsbetiae_contig1370.2823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5246bp|location=Sequence derived from alignment at L-elsbetiae_contig1370:5074..10319- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1370:5074..10319- >mRNA_L-elsbetiae_contig1370.2823.1 ID=mRNA_L-elsbetiae_contig1370.2823.1|Name=mRNA_L-elsbetiae_contig1370.2823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2442bp|location=Sequence derived from alignment at L-elsbetiae_contig1370:5074..10319- (Laminarionema elsbetiae ELsaHSoW15)back to top |