mRNA_L-elsbetiae_contig13318.2567.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: D8LN57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN57_ECTSI) HSP 1 Score: 292 bits (747), Expect = 3.870e-89 Identity = 149/180 (82.78%), Postives = 159/180 (88.33%), Query Frame = 1 Query: 1 QGVHEKGVKEGKTDASNRGGGGEKSKAGTEPPAPTPAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQDEMQSFMMGVVMGIPPGKDQELRENQKGQPELRGISRKLAHVAGI 540 QGVH+KGVKEGK + + +EPPAPTPAKREDVVFEVTDKTLQ+VV+ESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQ+ IAEVLGI AFPSVFGMKDGIILDNFVGGL QDEMQSFMMGVVMG+PP KDQ LRE+QK Q ELRGISRKLAHVAG+ Sbjct: 493 QGVHQKGVKEGKASTTKK----------SEPPAPTPAKREDVVFEVTDKTLQKVVLESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQRSIAEVLGIHAFPSVFGMKDGIILDNFVGGLAQDEMQSFMMGVVMGMPPPKDQALREHQKSQAELRGISRKLAHVAGL 662
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: A0A6H5KL39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL39_9PHAE) HSP 1 Score: 291 bits (745), Expect = 1.070e-88 Identity = 149/180 (82.78%), Postives = 158/180 (87.78%), Query Frame = 1 Query: 1 QGVHEKGVKEGKTDASNRGGGGEKSKAGTEPPAPTPAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQDEMQSFMMGVVMGIPPGKDQELRENQKGQPELRGISRKLAHVAGI 540 QGVH+KGVKEGK S + EPPAPTPAKREDVVFEVTDKTLQ+VV+ESPVPVILDVYAEWCGPCKQLTPALEEAA+RSGGMFRVAKVDAEKQ+ IAEVLGI AFPSVFGMKDGIILDNFVGGL QDEMQSFMMGVVMG+PP KDQ LRE+QK Q ELRGISRKLAHVAG+ Sbjct: 505 QGVHQKGVKEGKASTSKK----------NEPPAPTPAKREDVVFEVTDKTLQKVVLESPVPVILDVYAEWCGPCKQLTPALEEAAIRSGGMFRVAKVDAEKQRSIAEVLGIHAFPSVFGMKDGIILDNFVGGLAQDEMQSFMMGVVMGMPPPKDQALREHQKSQAELRGISRKLAHVAGL 674
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: A0A836CN35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN35_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.570e-48 Identity = 83/150 (55.33%), Postives = 113/150 (75.33%), Query Frame = 1 Query: 91 PPAPTPAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQDEMQSFMMGVVMGIPPGKDQELRENQKGQPELRGISRKLAHVAGI 540 P P PA ++DVVFE T +TLQQ+V+ESPVPV+LDVYA+WCGPCKQLTP LE+ A+RSGGMFR+ K+D+++++ IAE+L + A PSVF +++G I++NFVGGL DEMQ+FMM + G P D L+E Q Q + + S L +AG+ Sbjct: 272 PAGPKPAAKKDVVFEATSETLQQLVVESPVPVLLDVYADWCGPCKQLTPMLEDMAVRSGGMFRLVKLDSQQERSIAELLKVEALPSVFALRNGAIINNFVGGLDADEMQTFMMDFLTGKTPAADAPLKERQLTQRQRKDCSFALQQMAGL 421
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: W7TFJ6_9STRA (Thioredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFJ6_9STRA) HSP 1 Score: 160 bits (404), Expect = 4.470e-42 Identity = 78/146 (53.42%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 106 PAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQDEMQSFMMGVVMGIP-PGKDQELRENQKGQPELRGISRKLAHVAGI 540 PA DVVFEVT+ LQ++V+ESPVPV+LDVYAEWCGPCKQL P LE A+++GG+FR+AKVD++K +GI+E+LG+ A PSVF +DG ++DNFVG Q +Q+FM ++M P P D + K +L + KLAH+AG+ Sbjct: 464 PAAHADVVFEVTESDLQKIVIESPVPVLLDVYAEWCGPCKQLGPMLEAMAVKAGGLFRLAKVDSDKNRGISEMLGVQALPSVFAFRDGALVDNFVGMPQQATLQAFMTRLLMRSPRPPVDPLKDPHAKTAEDLEKMGSKLAHLAGL 609
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: A0A7S3VBH3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBH3_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.880e-37 Identity = 72/149 (48.32%), Postives = 108/149 (72.48%), Query Frame = 1 Query: 97 APTPAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQDE--MQSFMMGVVMGIPPGKDQELRENQKGQPELRGISRKLAHVAG 537 AP PAK+EDV+F+ T +TLQ++V+ESPVPV+LDVYA+WCGPCK LTPALE+ A++ GGMFR+ K++ ++++ I+ L + + P+VFG++DG I+ +F G +P+DE MQ+FMMG ++G E ++ EL S+KL + G Sbjct: 64 APGPAKKEDVIFQATSETLQKLVLESPVPVLLDVYADWCGPCKALTPALEQMAIKGGGMFRLVKLNTDEERNISAALEVQSLPTVFGIRDGKIVHHFKG-MPRDEKMMQNFMMG-LLGAAKFNPLVTAEEKENYEEL---SKKLIKIGG 207
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: A0A7S3Q836_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q836_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.790e-36 Identity = 72/149 (48.32%), Postives = 108/149 (72.48%), Query Frame = 1 Query: 97 APTPAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQDE--MQSFMMGVVMGIPPGKDQELRENQKGQPELRGISRKLAHVAG 537 AP PAK+EDV+F+ T +TLQ++V+ESPVPV+LDVYA+WCGPCK LTPALE+ A++ GGMFR+ K++ ++++ I+ L + + P+VFG++DG I+ +F G +P+DE MQ+FMMG ++G E ++ EL S+KL + G Sbjct: 358 APGPAKKEDVIFQATSETLQKLVLESPVPVLLDVYADWCGPCKALTPALEQMAIKGGGMFRLVKLNTDEERNISAALEVQSLPTVFGIRDGKIVHHFKG-MPRDEKMMQNFMMG-LLGAAKFNPLVTAEEKENYEEL---SKKLIKIGG 501
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: A0A7S2FXE5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FXE5_9STRA) HSP 1 Score: 142 bits (358), Expect = 6.730e-36 Identity = 66/149 (44.30%), Postives = 100/149 (67.11%), Query Frame = 1 Query: 100 PTPAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQDEMQSFMMGVVMGIPPGKDQELRENQKGQPE--LRGISRKLAHVAGI 540 P P R+DV + VT + Q +VM SPVPV++D++A WCGPCK L P LE+ MR+GG FRVA+VDA+ ++ + E L + A P+VF + I+D+FVG Q+++Q F+M +VM +P + E+ N+ G + L+ +SR LA+V G+ Sbjct: 213 PPPVDRDDVFYNVTMNSFQSMVMNSPVPVVIDIHASWCGPCKALNPILEDVVMRAGGQFRVARVDADVERELVEALEVKALPTVFVVSGCQIIDSFVGVPTQEDLQQFLMRLVMDVPRPETTEIAANETGHTDVQLKALSRSLANVVGM 361
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: A0A7S2YE07_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YE07_9STRA) HSP 1 Score: 142 bits (357), Expect = 8.120e-36 Identity = 71/152 (46.71%), Postives = 104/152 (68.42%), Query Frame = 1 Query: 91 PPAPTPAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQ--DEMQSFMMGVVMGIPPGKDQELRENQKGQPELRGISRKLAHVAGI 540 PPAP AK+ DVVFE T +Q++V+ESPVPV+LD+YA+WCGPCK L PALEE A++SGGMFR+ KV+++ ++ ++ L + A P+VFG+KDG I+ F G +P+ ++MQ+FMMG+++G K E + EL K+A + Sbjct: 307 PPAPKEAKKSDVVFEATTAQIQELVLESPVPVLLDIYADWCGPCKVLGPALEEMAVKSGGMFRLVKVNSDNERPVSTALEVTALPTVFGVKDGRIVHMFQG-MPKSPEDMQNFMMGLMVGESSFKPPLTTEQKDKYVELTNKLVKMASTSSF 457
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: A0A7S4ARI3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ARI3_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.750e-34 Identity = 65/119 (54.62%), Postives = 92/119 (77.31%), Query Frame = 1 Query: 100 PTPAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQDE--MQSFMMGVVMGIP 450 P PAK+EDVVFE T LQQ+V+ESPVPV+LD+YA+WCGPCK L PALE+ A++SGGMFR+ KV+++ ++ +++ L + A P+VFG+KDG I+ F G +P+ E M++FMMG+ P Sbjct: 286 PKPAKKEDVVFEATTAELQQLVLESPVPVLLDIYADWCGPCKVLGPALEDMAIKSGGMFRLVKVNSDNERPVSQALEVTALPTVFGIKDGKIVHMFQG-MPKSEDMMRNFMMGLFGAAP 403
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Match: A0A448ZQ02_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ02_9STRA) HSP 1 Score: 137 bits (345), Expect = 3.260e-34 Identity = 64/119 (53.78%), Postives = 92/119 (77.31%), Query Frame = 1 Query: 100 PTPAKREDVVFEVTDKTLQQVVMESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQKGIAEVLGIFAFPSVFGMKDGIILDNFVGGLPQDE--MQSFMMGVVMGIP 450 P PAK+EDVVFE T LQ++V+ESPVPV+LDVYA+WCGPCK L PALE+ A++SGGMFR+ K++++ ++ +++ L + A P+VFG+KDG I+ F G +P+ E M++FMMG+ P Sbjct: 288 PKPAKKEDVVFEATTDQLQKLVLESPVPVLLDVYADWCGPCKVLGPALEDMAIKSGGMFRLVKINSDNERPVSQALEVAALPTVFGIKDGKIVHKFEG-MPKSEDMMRNFMMGLFGAAP 405 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13318.2567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13318.2567.1 >prot_L-elsbetiae_contig13318.2567.1 ID=prot_L-elsbetiae_contig13318.2567.1|Name=mRNA_L-elsbetiae_contig13318.2567.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp QGVHEKGVKEGKTDASNRGGGGEKSKAGTEPPAPTPAKREDVVFEVTDKTback to top mRNA from alignment at L-elsbetiae_contig13318:1212..4914- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13318.2567.1 ID=mRNA_L-elsbetiae_contig13318.2567.1|Name=mRNA_L-elsbetiae_contig13318.2567.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3703bp|location=Sequence derived from alignment at L-elsbetiae_contig13318:1212..4914- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13318:1212..4914- >mRNA_L-elsbetiae_contig13318.2567.1 ID=mRNA_L-elsbetiae_contig13318.2567.1|Name=mRNA_L-elsbetiae_contig13318.2567.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig13318:1212..4914- (Laminarionema elsbetiae ELsaHSoW15)back to top |