mRNA_L-elsbetiae_contig1327.2538.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: D7FYM7_ECTSI (Proteasome subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM7_ECTSI) HSP 1 Score: 268 bits (684), Expect = 1.080e-85 Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTR+DEKP RSA ETVELVKEL VTAGERDIYTGDAVEITIISK+GTSTQMFPLKKD Sbjct: 114 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELLVTAGERDIYTGDAVEITIISKDGTSTQMFPLKKD 251
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: A0A835ZC48_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC48_9STRA) HSP 1 Score: 218 bits (556), Expect = 2.490e-66 Identity = 106/138 (76.81%), Postives = 122/138 (88.41%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 Y HN+ K+M+TPA AQMLANTLYYRRFFPYYSFNVL GLD +GKG+VFSYDAIGS+ERV YSASGSGQ+YIIP++DNLV FKTR D KP R+A ETV+LVK++F+TAGERDIYTGDAVEI II+ GT TQ+F LKKD Sbjct: 118 YKHNIGKDMSTPAAAQMLANTLYYRRFFPYYSFNVLAGLDAEGKGAVFSYDAIGSYERVEYSASGSGQSYIIPVMDNLVGFKTRLDPKPVRTAEETVDLVKDVFITAGERDIYTGDAVEICIITATGTQTQIFNLKKD 255
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: A0A7S2FLM8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLM8_9STRA) HSP 1 Score: 206 bits (524), Expect = 2.110e-61 Identity = 99/138 (71.74%), Postives = 117/138 (84.78%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 Y+H+ KEM+T AVAQML+NTLY RRFFPYYSFNVL GLDE+GKG+VFSYDAIGS+ER P+SASGSGQ+Y+IPL+DNLV FKTR D P + E V +VK+ FVTAGERDIYTGDAVEI +IS G +T++FPLKKD Sbjct: 127 YEHDCNKEMSTTAVAQMLSNTLYGRRFFPYYSFNVLAGLDEEGKGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRLDPVPDMTVEEIVSIVKDAFVTAGERDIYTGDAVEIKVISATGVTTELFPLKKD 264
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: A0A7S2DDA1_9STRA (Proteasome subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDA1_9STRA) HSP 1 Score: 204 bits (520), Expect = 2.180e-60 Identity = 97/138 (70.29%), Postives = 116/138 (84.06%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 YDH+ KEM+T A AQML+NTLYYRRFFPYYSFNVL GLDE+G+G+VFSYDAIGS+ER P+SASGSGQ+Y+IPL+DNLV FKTR D P ++ E V +VK+ FVTAGERDIYTGD +EI++I K+G T FPLKKD Sbjct: 159 YDHDCGKEMSTTAAAQMLSNTLYYRRFFPYYSFNVLAGLDEEGRGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRTDVMPDFTSEEAVNIVKDAFVTAGERDIYTGDTLEISVIKKDGIETITFPLKKD 296
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: A0A7S2XWL8_9STRA (Proteasome subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWL8_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.540e-60 Identity = 97/138 (70.29%), Postives = 114/138 (82.61%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 Y HN+ EM T AVAQMLANTLYYRRFFPYYSFNVLCG+D++GKG V+SYDAIGSFE VPYSASGSGQ+YIIPL+D+ V FK R KP + ETV++VK FVTAGERDIYTGD VEI +++ EG +++FPLKKD Sbjct: 118 YQHNVGHEMPTTAVAQMLANTLYYRRFFPYYSFNVLCGIDKEGKGVVYSYDAIGSFESVPYSASGSGQSYIIPLMDSTVAFKNRTQPKPNYTIEETVDIVKSAFVTAGERDIYTGDEVEIKVLTAEGCRSEIFPLKKD 255
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: A0A7S2SKB7_9STRA (Proteasome subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKB7_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.700e-60 Identity = 95/138 (68.84%), Postives = 115/138 (83.33%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 Y+H+M K M TPAVAQML+NTLYYRRFFPYYSFNVL G+D GKG+VFSYDAIGS+ERVPYS+SGSGQ Y++PL+DNLV FK RQD P + E V +VK+ F+TAGERDIYTGDAVEI +I+ G ++++ PLKKD Sbjct: 119 YEHDMGKAMDTPAVAQMLSNTLYYRRFFPYYSFNVLAGIDSDGKGAVFSYDAIGSYERVPYSSSGSGQNYMVPLMDNLVCFKNRQDTPPELTMEEVVRIVKDAFITAGERDIYTGDAVEIKVITASGVASEIMPLKKD 256
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: A0A7S4A4Q2_9STRA (Proteasome subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4Q2_9STRA) HSP 1 Score: 202 bits (514), Expect = 7.070e-60 Identity = 95/138 (68.84%), Postives = 116/138 (84.06%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 Y H M+TPAVAQML NTLYY+RFFPYY+FNVL G+D++G+G+V+SYDAIGSFERVP+SASGSGQ+Y+IPLLDN+V FK R DEKP +A V + KE FV+AGERDIYTGDAVEI +I+KEG +++ FPLKKD Sbjct: 129 YFHQTGSHMSTPAVAQMLGNTLYYKRFFPYYAFNVLAGVDKEGRGAVYSYDAIGSFERVPFSASGSGQSYVIPLLDNIVTFKNRLDEKPELTADYAVSIAKEAFVSAGERDIYTGDAVEIVVITKEGMTSETFPLKKD 266
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: A0A6U3TS88_9STRA (Proteasome subunit beta n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TS88_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.490e-56 Identity = 93/138 (67.39%), Postives = 111/138 (80.43%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 Y HN K MATP+VAQML NTLY +RFFPYYSFNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ ++IPL+DN++ K R DE+ E VE+VK+ F+TAGERDIYTGDAVEI II+KEG T+MF LK D Sbjct: 143 YQHNHRKPMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRCDEQRDLPVEEVVEIVKDAFLTAGERDIYTGDAVEIKIITKEGIRTEMFNLKAD 280
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: A0A7S2N0R8_9STRA (Proteasome subunit beta n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2N0R8_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.280e-56 Identity = 91/138 (65.94%), Postives = 114/138 (82.61%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 Y HN K M+TP+VAQML+NTLYY+RFFPYY+FNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ+++IPL+DN++ K R DEK + E VE+VK+ FVTAGERDIYTGDAVEI +I+KEG ++F LK D Sbjct: 134 YAHNHRKPMSTPSVAQMLSNTLYYKRFFPYYAFNVLAGVDAEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVIAHKNRCDEKRDLPSEEVVEIVKDAFVTAGERDIYTGDAVEIMVITKEGIKKEIFKLKAD 271
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Match: K0S6G4_THAOC (Proteasome subunit beta n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6G4_THAOC) HSP 1 Score: 194 bits (492), Expect = 2.300e-56 Identity = 91/138 (65.94%), Postives = 112/138 (81.16%), Query Frame = 2 Query: 2 YDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSATETVELVKELFVTAGERDIYTGDAVEITIISKEGTSTQMFPLKKD 415 Y HN K MATP+VAQML NTLYY+RFFPYYSFNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ+++IPL+DN++ K R DE+ A E VE+VK+ F+TAGERDIYTGDAV+I +I+K+G Q F LK D Sbjct: 146 YAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVISHKNRLDERRDLPAEEVVEIVKDAFLTAGERDIYTGDAVDIMVITKDGIDKQTFQLKAD 283 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1327.2538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1327.2538.1 >prot_L-elsbetiae_contig1327.2538.1 ID=prot_L-elsbetiae_contig1327.2538.1|Name=mRNA_L-elsbetiae_contig1327.2538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp MEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGback to top mRNA from alignment at L-elsbetiae_contig1327:518..1546+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1327.2538.1 ID=mRNA_L-elsbetiae_contig1327.2538.1|Name=mRNA_L-elsbetiae_contig1327.2538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1029bp|location=Sequence derived from alignment at L-elsbetiae_contig1327:518..1546+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1327:518..1546+ >mRNA_L-elsbetiae_contig1327.2538.1 ID=mRNA_L-elsbetiae_contig1327.2538.1|Name=mRNA_L-elsbetiae_contig1327.2538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=810bp|location=Sequence derived from alignment at L-elsbetiae_contig1327:518..1546+ (Laminarionema elsbetiae ELsaHSoW15)back to top |