mRNA_L-elsbetiae_contig13200.2502.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: A0A285M122_9HYPH (Methyl-accepting chemotaxis protein n=2 Tax=Cohaesibacter sp. ES.047 TaxID=1798205 RepID=A0A285M122_9HYPH) HSP 1 Score: 155 bits (392), Expect = 4.390e-42 Identity = 93/136 (68.38%), Postives = 115/136 (84.56%), Query Frame = 1 Query: 1 AVPSASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAATGSAV 408 AV SA+QEA+TNV+TVAAA EELS++I EI NQVA+S ++S AVAQAD N ++ GL EA ++IG+++++I+DIAEQTNLLALNATIEAARAGEAGKGFAVVA EVK LA+QT+KATE+IS QI +Q T SAV Sbjct: 325 AVSSAAQEAATNVETVAAATEELSSSIGEIGNQVAKSANISSQAVAQADQTNAQINGLVEAAEKIGQVVNIIADIAEQTNLLALNATIEAARAGEAGKGFAVVAAEVKELASQTSKATEEISSQISTIQTETRSAV 460
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: UPI0005B25212 (methyl-accepting chemotaxis protein n=1 Tax=Azospirillum sp. B506 TaxID=137721 RepID=UPI0005B25212) HSP 1 Score: 147 bits (371), Expect = 1.530e-41 Identity = 87/131 (66.41%), Postives = 114/131 (87.02%), Query Frame = 1 Query: 13 ASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAATGSA 405 A+++AS NVQTVA+A +EL+ +I+EIS QV++ST+++ AV +AD+ N++++GL EA QRIG+++ LI+DIA QTNLLALNATIEAARAGEAGKGFAVVA+EVK+LANQTAKATE+I+ QI MQ ATG A Sbjct: 27 AAEQASVNVQTVASATDELTASISEISAQVSRSTTIAAQAVDEADATNRQVQGLVEAAQRIGDVVKLITDIASQTNLLALNATIEAARAGEAGKGFAVVASEVKNLANQTAKATEEIAGQILAMQQATGEA 157
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: UPI001D3811A0 (methyl-accepting chemotaxis protein n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001D3811A0) HSP 1 Score: 155 bits (391), Expect = 3.230e-41 Identity = 94/136 (69.12%), Postives = 113/136 (83.09%), Query Frame = 1 Query: 1 AVPSASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAATGSAV 408 AV SAS++ASTNVQTVAAAAEELS++IAEIS Q+ S+ V+ GA +A N + GL +A QRIG++++LI +IA QTNLLALNATIEAARAGEAGKGFAVVA EVK+LA QTAKATE+IS Q+ +MQAATG AV Sbjct: 546 AVASASEQASTNVQTVAAAAEELSSSIAEISRQLNASSQVAMGAAGKARETNTIVEGLADAAQRIGQVVNLIGEIASQTNLLALNATIEAARAGEAGKGFAVVATEVKNLAGQTAKATEEISSQVADMQAATGGAV 681
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: UPI0012BD7638 (methyl-accepting chemotaxis protein n=1 Tax=Curvivirga aplysinae TaxID=2529852 RepID=UPI0012BD7638) HSP 1 Score: 152 bits (383), Expect = 1.130e-40 Identity = 91/135 (67.41%), Postives = 113/135 (83.70%), Query Frame = 1 Query: 4 VPSASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAATGSAV 408 V SA+ EA+TNVQTVA+AAE+L+ +I EIS+QVA S +S A QAD+ Q+++GLDEA Q+IG++M LIS+IA+QTNLLALNATIEAARAGEAGKGFAVVANEVK+LANQTA AT +I QI ++Q+AT AV Sbjct: 350 VSSAANEAATNVQTVASAAEQLTASIREISHQVAISAQISTNATGQADAIAQQIKGLDEAAQKIGDVMGLISEIADQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTANATGEIDMQITQVQSATKEAV 484
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: A0A7U6Y2S6_9PROT (Methyl-accepting chemotaxis protein n=1 Tax=Rhodospirillaceae bacterium LM-1 TaxID=2682548 RepID=A0A7U6Y2S6_9PROT) HSP 1 Score: 146 bits (369), Expect = 1.590e-39 Identity = 90/135 (66.67%), Postives = 107/135 (79.26%), Query Frame = 1 Query: 4 VPSASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAATGSAV 408 V A+ A+ NVQTVAAAAEEL+ +I+E+ QVAQST+++Q AVA+A AN + GL A RIGE++ LI+DIA QTNLLALNATIEAARAGEAGKGFAVVANEVK LANQTAKA E+I + IG +Q AT AV Sbjct: 204 VAQAADSAAGNVQTVAAAAEELAASISEVRRQVAQSTAIAQAAVAEASKANDMIGGLSSAAGRIGEVVQLINDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKHLANQTAKAAEEIVQLIGSVQGATTDAV 338
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: A0A2E7K207_9RICK (Methyl-accepting transducer domain-containing protein n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E7K207_9RICK) HSP 1 Score: 145 bits (367), Expect = 3.690e-39 Identity = 88/130 (67.69%), Postives = 109/130 (83.85%), Query Frame = 1 Query: 19 QEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAATGSAV 408 QEA N++TVAAAAEEL+ +I EIS +V +ST V+Q AV A ++N + GL EA +IG+++ LISDIA QTNLLALNATIEAARAGEAG+GFAVVA EVK+LA+QT+KATEDISRQIG++Q +TGSAV Sbjct: 211 QEARHNLETVAAAAEELTYSINEISGRVQESTRVAQQAVEHAKASNTTVMGLSEASNKIGDVVKLISDIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKNLADQTSKATEDISRQIGDIQNSTGSAV 340
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: H6SLY6_PARPM (Methyl-accepting chemotaxis sensory transducer n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SLY6_PARPM) HSP 1 Score: 142 bits (359), Expect = 3.920e-39 Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 1 Query: 13 ASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAAT 396 A+++AS NVQ AAAAEELS +I EI QV QS +S AV +A + N+ +RGL EA RIGE++ LI+DIA QTNLLALNATIEAARAG+AGKGFAVVA EVKSLANQTA+AT++IS QIG +QA+T Sbjct: 79 ATRDASANVQNAAAAAEELSVSIREIGRQVEQSNRLSSSAVTEARATNETIRGLAEASARIGEVVKLINDIASQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTARATDEISAQIGAVQAST 206
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: A0A6L9YVS2_9CYAN (Chemotaxis protein n=1 Tax=Moorena sp. SIO3E8 TaxID=2607830 RepID=A0A6L9YVS2_9CYAN) HSP 1 Score: 142 bits (357), Expect = 4.510e-39 Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 1 Query: 13 ASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAAT 396 A+QEAST+ T+AA+ EEL+ AI EIS+QVA S V+ AV +++ A + ++ LD Q IGEI+SLI IAEQTNLLALNATIEAARAGEAGKGFAVVANEVK+LA QTAKATEDIS Q+GE+Q+ T Sbjct: 62 AAQEASTSADTIAASMEELTTAIREISSQVATSAGVAVEAVTRSEEAGELVQTLDSGAQAIGEIVSLIKGIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKNLATQTAKATEDISNQVGEIQSVT 189
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: A0A2N3KM70_9PROT (Methyl-accepting chemotaxis protein n=2 Tax=Thalassospira marina TaxID=2048283 RepID=A0A2N3KM70_9PROT) HSP 1 Score: 147 bits (371), Expect = 4.810e-39 Identity = 90/135 (66.67%), Postives = 111/135 (82.22%), Query Frame = 1 Query: 4 VPSASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAATGSAV 408 V SASQE STN+ TVAAAAEELS +I EIS QV+QS+ V+ GAV +++ +++ L +A +IGE++SLISDIA QTNLLALNATIEAARAG+AGKGFAVVANEVK+LA+QTAKATEDI Q+ +Q AT +AV Sbjct: 332 VSSASQEMSTNIDTVAAAAEELSASIGEISTQVSQSSQVANGAVTKSEDTYKKIELLADAANQIGEVISLISDIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKTLASQTAKATEDIRTQVSGIQTATDTAV 466
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Match: A0A418W2T7_9PROT (Methyl-accepting chemotaxis protein n=1 Tax=Azospirillum cavernae TaxID=2320860 RepID=A0A418W2T7_9PROT) HSP 1 Score: 149 bits (375), Expect = 5.330e-39 Identity = 90/136 (66.18%), Postives = 110/136 (80.88%), Query Frame = 1 Query: 1 AVPSASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSANQEMRGLDEAGQRIGEIMSLISDIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKSLANQTAKATEDISRQIGEMQAATGSAV 408 AV +AS++A+TNVQTVAAAAEELS++IAEIS Q+ S+ + GA +A N + GL A +RIG+++ LI +IAEQTNLLALNATIEAARAGEAGKGFAVVA EVK+LA QTAKATE+IS Q+ +MQ ATG AV Sbjct: 567 AVATASEQATTNVQTVAAAAEELSSSIAEISRQLNASSEAAVGAAEKAVQTNSIVEGLSHAAERIGQVVGLIGEIAEQTNLLALNATIEAARAGEAGKGFAVVATEVKNLAGQTAKATEEISAQVADMQTATGGAV 702 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13200.2502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13200.2502.1 >prot_L-elsbetiae_contig13200.2502.1 ID=prot_L-elsbetiae_contig13200.2502.1|Name=mRNA_L-elsbetiae_contig13200.2502.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=137bp AVPSASQEASTNVQTVAAAAEELSNAIAEISNQVAQSTSVSQGAVAQADSback to top mRNA from alignment at L-elsbetiae_contig13200:4774..5184+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13200.2502.1 ID=mRNA_L-elsbetiae_contig13200.2502.1|Name=mRNA_L-elsbetiae_contig13200.2502.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=411bp|location=Sequence derived from alignment at L-elsbetiae_contig13200:4774..5184+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13200:4774..5184+ >mRNA_L-elsbetiae_contig13200.2502.1 ID=mRNA_L-elsbetiae_contig13200.2502.1|Name=mRNA_L-elsbetiae_contig13200.2502.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=822bp|location=Sequence derived from alignment at L-elsbetiae_contig13200:4774..5184+ (Laminarionema elsbetiae ELsaHSoW15)back to top |