mRNA_L-elsbetiae_contig13068.2423.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: D7FTE3_ECTSI (Methylthioribose-1-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE3_ECTSI) HSP 1 Score: 274 bits (700), Expect = 5.660e-85 Identity = 146/176 (82.95%), Postives = 157/176 (89.20%), Query Frame = 1 Query: 1 CRCNLWR-FSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASELKTVAGTKIAPDGIAAWNPAFDVTPAGLITAIVTDRGLVPRK---GEGKDKGFDVKAFCESKANAAGE 516 C C R +++GARLTAYEFVA+GLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATG I IEERPASELKTVAGTKIAPDGI+AWNPAFDVTPA LITAIVTD+G VPRK G+ KDK FDVKAFC++ + G+ Sbjct: 201 CYCTETRPYNQGARLTAYEFVADGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGGGISIEERPASELKTVAGTKIAPDGISAWNPAFDVTPARLITAIVTDKGCVPRKEATGD-KDKEFDVKAFCQAMSTGEGQ 375
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: A0A7S3FFL6_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FFL6_9VIRI) HSP 1 Score: 202 bits (513), Expect = 2.730e-60 Identity = 107/165 (64.85%), Postives = 128/165 (77.58%), Query Frame = 1 Query: 7 CNLWRFSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASEL-KTVAGTKIAPDGIAAWNPAFDVTPAGLITAIVTDRGLVPR-KGEGKDKGFDVKAFCES 495 C +++G RLTAYE VA+GLPGTLI DSAA+ MAQGKV AV VGADRVAANGDTANKIGT LA+AAAH+ +PF V +P T+ DP TATGA+IVIEER A+EL +T G +APDGI WNPAFDVTPAGLI +VT++G+V R KGE + D+KAF E+ Sbjct: 53 CETRPYNQGGRLTAYEIVADGLPGTLIADSAAASAMAQGKVQAVIVGADRVAANGDTANKIGTYALAVAAAHHNVPFFVASPTTTLDPTTATGADIVIEERDATELTRTRGGEALAPDGICVWNPAFDVTPAGLIAGVVTEKGVVARGKGE---RAIDIKAFVEA 214
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: A0A7R9TVX8_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TVX8_9VIRI) HSP 1 Score: 185 bits (470), Expect = 9.460e-56 Identity = 97/147 (65.99%), Postives = 112/147 (76.19%), Query Frame = 1 Query: 7 CNLWRFSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASEL-KTVAGTKIAPDGIAAWNPAFDVTPAGLITAIVTDRGLVPR 444 C +++G RLTAYE VA+GLPGTLI DSAA+ +MA GKV AV VGADRVAANGDTANKIGT LA+AA H+GIPF V AP T+ DP T TGA+IVIEER A EL +T G +AP+GI WNPAFDV PA LI IVT+RG+ R Sbjct: 104 CETRPYNQGGRLTAYEIVADGLPGTLIADSAAAAMMASGKVQAVVVGADRVAANGDTANKIGTYALAVAAHHHGIPFFVAAPTTTLDPTTPTGADIVIEERSADELLRTRGGEALAPEGIDVWNPAFDVAPAALIAGIVTERGVAAR 250
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: MTNA_MONBE (Methylthioribose-1-phosphate isomerase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=MTNA_MONBE) HSP 1 Score: 181 bits (459), Expect = 5.510e-53 Identity = 96/162 (59.26%), Postives = 117/162 (72.22%), Query Frame = 1 Query: 22 FSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASELKTVAGTKIAPDGIAAWNPAFDVTPAGLITAIVTDRGLVPRKGEGKDKGFDVKAFCESKANA 507 +++GARLTAYE V EG+PGTL+ DS S LM Q + AV VGADRV ANGDTANKIGT Q+AIAA H+G+PF V APLTS D + + G+EI IEERP EL + G ++A GI WNPAFDVTPA LIT I+T+RG V K EG+ + FD+ +F S A Sbjct: 202 YNQGARLTAYELVTEGIPGTLVADSMVSLLMKQKGISAVVVGADRVVANGDTANKIGTYQIAIAAKHHGVPFFVAAPLTSVDLKLSHGSEITIEERPGKELTHIFGQQLAAPGIGTWNPAFDVTPADLITGIITERG-VAYKAEGQQE-FDMASFAASVGRA 361
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: A0A835YPH9_9STRA (Methylthioribose-1-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH9_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.330e-52 Identity = 102/163 (62.58%), Postives = 122/163 (74.85%), Query Frame = 1 Query: 22 FSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASELKTVAGTKIAPDGIAAWNPAFDVTPAGLITAIVTDRGLV-PRKGEGKDKGFDVKAFCESKANA 507 +++GARLTA+E V + LPGTLI DS ASFLMAQG VDAVA GADRV ANGDTANKIGT QLAIAA H+ +PF +VAP+T+ D A G++I IE+R A EL +VAG KIA DGI WNPAFDVTPA LIT IVTD G++ P K FD+ AF + ++A Sbjct: 215 YNQGARLTAFEMVEDNLPGTLITDSMASFLMAQGGVDAVATGADRVVANGDTANKIGTYQLAIAAKHHRLPFYIVAPVTTLDAALADGSQIKIEQRAAEELTSVAGIKIAADGIRVWNPAFDVTPAELITGIVTDVGVIRPTLDAQGKKVFDIPAFLRAHSSA 377
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: A0A1I8FZC8_9PLAT (Methylthioribose-1-phosphate isomerase n=5 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8FZC8_9PLAT) HSP 1 Score: 179 bits (453), Expect = 4.930e-52 Identity = 93/140 (66.43%), Postives = 109/140 (77.86%), Query Frame = 1 Query: 22 FSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASELKTVAGTKIAPDGIAAWNPAFDVTPAGLITAIVTDRGLVP 441 +++GARLTAYE VA+GLPGTLI DS + MA G+V AV +GADR+ +NGDTANKIGT Q+A+ A H+ IPF V APLTS D TG+EIVIEERP+ EL VAG +IA GI WNPAFDVTPA LITAIVTD G+VP Sbjct: 211 YNQGARLTAYEIVADGLPGTLICDSMVAAAMASGRVHAVVLGADRIVSNGDTANKIGTYQIAVLARHHSIPFFVAAPLTSIDFSMRTGSEIVIEERPSDELACVAGQRIACRGIDIWNPAFDVTPAELITAIVTDTGVVP 350
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: A0A7S0CWW0_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CWW0_MICPS) HSP 1 Score: 177 bits (449), Expect = 2.950e-51 Identity = 93/168 (55.36%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 7 CNLWR-FSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASELKTVAGTKIAPDGIAAWNPAFDVTPAGLITAIVTDRGLVPRKGEGKDKGFDVKAFCESKANA 507 CN R +++GARLTAYE E +PGTLI DSAA+ LMAQ KVDAV VGADRVA NGDTANKIGT LA++ A++ +PF V AP+++ DP T G +IVIE+RPA E+ V G ++A DGI WNP+FDVTP LI I+T++G+V + G F+V F + A A Sbjct: 219 CNETRPYNQGARLTAYEIAFEKMPGTLICDSAAASLMAQKKVDAVVVGADRVADNGDTANKIGTYNLAVSCAYHSVPFFVAAPVSTLDPSTKKGDDIVIEDRPAEEITHVRGVRVAADGIGVWNPSFDVTPGSLIAGIITEKGVVQKTSNGT---FEVGKFVAAAAGA 383
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: UPI001885775E (methylthioribose-1-phosphate isomerase-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001885775E) HSP 1 Score: 174 bits (442), Expect = 1.470e-50 Identity = 92/147 (62.59%), Postives = 113/147 (76.87%), Query Frame = 1 Query: 22 FSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASELKTVAGTKIAPDGIAAWNPAFDVTPAGLITA-IVTDRGLVPRKGEGK 459 + +G+RLTAYE V E +P TL+ DSA + LM G+V AV VGADRVAANGDTANKIGT QLA+ AAH+ +PF V AP TS D A+GAEI IEERPA+EL VAG ++A DGIAAWNPAFDVTP+ LIT I+T++G++P G+ Sbjct: 200 YMQGSRLTAYELVHEQIPATLVCDSAVAALMRDGRVHAVVVGADRVAANGDTANKIGTYQLAVVAAHHSVPFYVAAPSTSIDLGLASGAEIPIEERPAAELLCVAGHRLAADGIAAWNPAFDVTPSNLITGGIITEKGVLPAADVGR 346
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: A0A5J4XKF7_9CHLO (Methylthioribose-1-phosphate isomerase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XKF7_9CHLO) HSP 1 Score: 181 bits (460), Expect = 4.660e-50 Identity = 92/155 (59.35%), Postives = 114/155 (73.55%), Query Frame = 1 Query: 22 FSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASELKTVAGTKIAPDGIAAWNPAFDVTPAGLITAIVTDRGLVPRKGEGKDKGFDVKAF 486 +++GARLTAYE + +GLP TLI DSAA+ LMAQGKVDA+ VGADRVAANGDTANKIGT LA+ A H+ +PF V AP T+ DP G++I IE RP SE+ G ++APDGI WNP FDVTPA LI ++T+RGL+P + + FDV AF Sbjct: 211 YNQGARLTAYELMHDGLPATLICDSAAAALMAQGKVDAIVVGADRVAANGDTANKIGTYSLAVLAKHHNVPFFVAAPTTTLDPNLPAGSDITIEHRPGSEVTHFQGKQVAPDGIDVWNPCFDVTPATLIEGVITERGLLPNR----NGVFDVPAF 361
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Match: A0A1L4D4C7_9PROT (Methylthioribose-1-phosphate isomerase n=1 Tax=Silvanigrella aquatica TaxID=1915309 RepID=A0A1L4D4C7_9PROT) HSP 1 Score: 173 bits (439), Expect = 5.810e-50 Identity = 93/161 (57.76%), Postives = 115/161 (71.43%), Query Frame = 1 Query: 22 FSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGADRVAANGDTANKIGTLQLAIAAAHYGIPFLVVAPLTSCDPETATGAEIVIEERPASELKTVAGTKIAPDGIAAWNPAFDVTPAGLITAIVTDRGLVPRKGEGKDKGFDVKAFCESKAN 504 +++GARLTA+E V E +P TLI DS ASFLM + +D V VGADRV ANGDTANKIGT QLAIAAA++ IPF V AP+TS D +GAEI IEERP EL + G +IA GI WNP+FD+TP LIT IVT+ G++P+ +G+ F+VK F K N Sbjct: 205 YNQGARLTAFELVFEKIPATLITDSMASFLMKEKGIDGVIVGADRVVANGDTANKIGTYQLAIAAAYHNIPFYVAAPITSIDCSKLSGAEIHIEERPKQELTHINGVQIAAKGIDVWNPSFDITPGILITGIVTEWGVIPKNNKGE---FNVKEFLLKKQN 362 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13068.2423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13068.2423.1 >prot_L-elsbetiae_contig13068.2423.1 ID=prot_L-elsbetiae_contig13068.2423.1|Name=mRNA_L-elsbetiae_contig13068.2423.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp CRCNLWRFSKGARLTAYEFVAEGLPGTLIPDSAASFLMAQGKVDAVAVGAback to top mRNA from alignment at L-elsbetiae_contig13068:2007..4601+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13068.2423.1 ID=mRNA_L-elsbetiae_contig13068.2423.1|Name=mRNA_L-elsbetiae_contig13068.2423.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2595bp|location=Sequence derived from alignment at L-elsbetiae_contig13068:2007..4601+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13068:2007..4601+ >mRNA_L-elsbetiae_contig13068.2423.1 ID=mRNA_L-elsbetiae_contig13068.2423.1|Name=mRNA_L-elsbetiae_contig13068.2423.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1032bp|location=Sequence derived from alignment at L-elsbetiae_contig13068:2007..4601+ (Laminarionema elsbetiae ELsaHSoW15)back to top |