mRNA_L-elsbetiae_contig1296.2345.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: D8LLG8_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG8_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 1.110e-133 Identity = 229/370 (61.89%), Postives = 276/370 (74.59%), Query Frame = 1 Query: 1 LRNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHR--GTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTE-DGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGA---RMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEE-EEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPA-ATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQEFPAGKFYRHGQEIGW 1086 LRNV++TGANRGLGFAIAD ML +G +RVVLACR++QEG ALERLR Q+QRR R GT+ T LAS PLDV+CPRS+E FRE+CVN HLGGRVD+LFNNAGVC E DG+ + AAAAG LRETLAVNFFGAL V +AC+PAL +AA VA + A E++ + + L PPTVVWISSG+GELCFLG+KWR LLA A++LE++KS +SDLLA+A + S ++ PA ++E + + EEMAFGPTPAYSLSKAA NAAVR WAP + P A AP S TG GGGVRL+AVCPGDVLTRMT+ EE+ARGDAVSP+EAA VV +A+S A + PAG+FYRHG+EIGW Sbjct: 53 LRNVIVTGANRGLGFAIADRMLKLGSYRVVLACRNEQEGRDALERLRGKQQQRRQRQYGTIATNFLASFFPLDVTCPRSVEVFREDCVNGHLGGRVDILFNNAGVCFPEQDGNGPQNNR-----AAAAGILRETLAVNFFGALEVVEACVPALQAAAPMVARKEKKKAALMLEDNGATSTMTSLKPPTVVWISSGDGELCFLGSKWRGLLAEAQSLEDVKSPLSDLLATATDTITTTSKQNSTAPAGSQQEGEQGQVEEMAFGPTPAYSLSKAAVNAAVRTWAPCIQAPTVPAEAPENTKSRTGVRGGGVRLVAVCPGDVLTRMTSKEEMARGDAVSPEEAAVEVVDLALSSANDIPAGRFYRHGEEIGW 417
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A835YS44_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS44_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.150e-21 Identity = 99/297 (33.33%), Postives = 135/297 (45.45%), Query Frame = 1 Query: 208 LDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGARMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRP-PAATAPTPGSSHTGGVGGGVR---LIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQEFPAGKFYRHGQEIGW 1086 LDVS P S++ F C+ G + +FNNAGVCL A L+ +L VNF+G L V +AC+P + EE VV +SSG+GEL +L + L A+ ++++++ D+L A DP + E+AFG TPAYS+SKA NAAVR P PA A G + + G G + +IAVCPGDV T M + EE R +S EAAA VV +A + + G FYR+G I W Sbjct: 105 LDVSSPDSIKHFATQCLPTLPSGSLTAVFNNAGVCLP---------------GADIATLQYSLGVNFYGPLRVMEACLPFMD---------------EEG------------VVVNVSSGDGELLWLNSDIAEALRQAQTVQDVRAAADDILQRAAL-----------DPGA----------ELAFGATPAYSVSKALLNAAVRCRHGIPYAPDPAEGALNAGRASSRGGGSTAQRPAVIAVCPGDVRTLMASEEEAQREGVLSALEAAAHVVGLA-TWRERTAGGLFYRYGAVIPW 337
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A7S2XFG2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFG2_9EUKA) HSP 1 Score: 84.7 bits (208), Expect = 6.980e-15 Identity = 115/362 (31.77%), Postives = 158/362 (43.65%), Query Frame = 1 Query: 13 VITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGARMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPAATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQ----EFPAGKFYRHGQEIGW 1086 ++TG RGLG+AIA+ M G + VV+A R + GN A ++ + R GT+ S LD+ S+ +FR+ C + GG VDVLFNNA VCL +G N A R + +N G LA+ + M +M E S T V+ +SS EGEL +L + L A S D A R E S ++ DP E AFGPTP YS+SKAA A + A R G S + AVCPGDV T M T E+ AVSP EA+ VV +A++ + + GKF+R+ +++ W Sbjct: 24 IVTGGTRGLGYAIAERMARRG-YDVVIAGRDENIGNEAATNIQRSISTRGV-GTV------SYRKLDLENAESINNFRQWCRRNVEGG-VDVLFNNAAVCL--EGSNVEVA-------------RSSFQINVIGPLALVEGLMEQQ----------KMDDRRERRKS-------TQRCVINVSSSEGELGYLHSSLAEALLTA-------SASDDPQAVIRVLE---SIQNDFDPLL----------EYAFGPTPFYSVSKAALIALTQVLARR---------DPDGRSFA--------VHAVCPGDVSTSMMTPEQ--ESHAVSPAEASEDVVWLALAHPRRADGKLDHGKFWRYREQVEW 305
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A7S1GWA1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GWA1_HEMAN) HSP 1 Score: 83.2 bits (204), Expect = 1.300e-14 Identity = 90/276 (32.61%), Postives = 118/276 (42.75%), Query Frame = 1 Query: 268 LGGRV---DVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGARMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPAATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQEFPAGKFYRHGQEIGW 1086 L GR+ D+L +NAGVCL E D H + VNFFGAL + A PA M VV ISSGEGEL +L ++ + LL E+++E+ M + A E E+AFGPTP+YS+SKA NA R A T GS H +G + AVCPGDV T M T +E + +SP++AA VV +A+ P +E G F+RH I W Sbjct: 67 LDGRLPVPDLLISNAGVCL-EGSDRSIFDH--------------AMQVNFFGALRMIRALAPA--------------------------MRRKGGCVVNISSGEGELVYLCSRLQELLPSIESVDELCRVMEACIDDAEGGE-----------------------ELAFGPTPSYSVSKAGLNALTRILA----------CSTRGSPHDHTLG----VRAVCPGDVDTAMCTLDE--KDGVLSPEQAAIDVVWVALHP-EECANGGFFRHRDSIPW 261
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: L1IQ43_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IQ43_GUITC) HSP 1 Score: 70.9 bits (172), Expect = 4.800e-11 Identity = 61/180 (33.89%), Postives = 83/180 (46.11%), Query Frame = 1 Query: 547 VVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPAATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQEFPAGKFYRHGQEIGW 1086 ++ ISSG+GEL L ++ +RLL ++ +++S + +L E T +E+AFGPTPAYS+SKAA N R A + +R +AVCPGDV TRM +A E GD V AA V AI E P+G FYR + I W Sbjct: 25 IINISSGDGELACLNSELQRLLKEVQSESDLESLLRELW----------------------EGTCLRGQELAFGPTPAYSVSKAALNVLTRIQAREIEMSQLK----------------LRAVAVCPGDVDTRMCSAGE---GDRVLTPAQAAGDVIWAIERPSECPSGGFYREREPIPW 163
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A5B8XRJ5_9DELT (SDR family oxidoreductase n=1 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XRJ5_9DELT) HSP 1 Score: 69.3 bits (168), Expect = 8.290e-10 Identity = 88/317 (27.76%), Postives = 123/317 (38.80%), Query Frame = 1 Query: 1 LRNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGARMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAE-NLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPAATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRM 948 +R V+TGANRGLG + + +H V+L R+ + G + T PLDVS S+ +F E + H GRVD+L NNAGV L DG + R +R+TLAVN++GA+ V +A P L T +V +SSG GEL LG + R + + L+++ M EE+ E M P+ AY +SK NA R A A+ +P +R+ AVCPG V T M Sbjct: 1 MRIAVVTGANRGLGLEVCRQLAQ-RDHHVILTARNAEAGQH-----------------MATKYGFEFRPLDVSDVESVNNFAERVQDKH--GRVDILVNNAGVAL--DGFDLR-------------VVRDTLAVNYYGAVRVTEALKPFLG---------------------------TDARIVNVSSGMGELACLGLELRERFSDPDLTLDDLNKLMLKF----------------------EEDVAFESHVMKGWPSSAYRVSKVGLNAYTRILAREFE---ASESP-------------IRVNAVCPGSVRTDM 217
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: UPI001E61C1A8 (oxidoreductase n=1 Tax=Nocardioides sp. R-C-SC26 TaxID=2870414 RepID=UPI001E61C1A8) HSP 1 Score: 67.0 bits (162), Expect = 8.330e-9 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 4 RNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGV 309 R V+TGAN G+G A+A+ +++ G H VV+ACR ++ G AA + +RA +LP T+ +V LD+S S+ F EN L G +DVL NNAGV Sbjct: 27 RRFVVTGANSGIGLALAERLVESGAH-VVMACRDERRGEAAADTIRAT--------SLPGTVEVAV--LDLSDLASVRRFTEN-----LDGEIDVLVNNAGV 112
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A016XJL0_9BURK (Short-chain dehydrogenase n=1 Tax=Hylemonella gracilis str. Niagara R TaxID=1458275 RepID=A0A016XJL0_9BURK) HSP 1 Score: 65.9 bits (159), Expect = 1.000e-8 Identity = 54/154 (35.06%), Postives = 74/154 (48.05%), Query Frame = 1 Query: 4 RNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAA 465 R ++TGAN+G+G+AIA + G RV+L R Q G AA+ LRA L S LDV+ S+ + +H GR+D+L NNAG+ D + A+ A R T+ NFFG LAV A +P L +A A Sbjct: 5 RIALVTGANKGIGYAIAQQLAKAGV-RVILGARDAQRGQAAVASLRAQ------------GLEVSAVALDVTDETSISAAAAVIQAEH--GRLDILVNNAGIFDPADAPPSK---------ASLAAARRTMETNFFGVLAVTQAMLPLLRAAPA 134
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A561WXG8_9ACTN (Short-subunit dehydrogenase n=2 Tax=Micromonospora TaxID=1873 RepID=A0A561WXG8_9ACTN) HSP 1 Score: 64.3 bits (155), Expect = 3.160e-8 Identity = 55/149 (36.91%), Postives = 66/149 (44.30%), Query Frame = 1 Query: 4 RNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPAL 450 R V+TGANRG+G A+ +LD G VLACR G AA L P V LDV S+ +F + GRVDVL NNAG+ D D A A G +RE VN GAL V+ A +P L Sbjct: 5 RTAVVTGANRGIGLAVVQQLLDRG-FVTVLACRDTGRGEAAAATL------------TPAPGRVLVRRLDVGDDDSVRAFAAGLAD--APGRVDVLVNNAGIHYDTDQDP---------AGADVGVVREAFEVNALGALKVSQAVLPLL 129
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A7J7BQT9_9COLE (Carbonyl reductase (NADPH) n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7BQT9_9COLE) HSP 1 Score: 66.2 bits (160), Expect = 3.240e-8 Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 13 VITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRE-TLAVNFFGALAVADACMPAL 450 V+TG N+G+GFAI + D + +V L RS++ GN A+E+L+ L A H LD++ S+ F+++ + D +GG +DVL NNAG+ + AA AG E T+A N+FG L + +A P L Sbjct: 284 VVTGGNKGIGFAIVKGLCDKFKGKVYLTARSEKLGNEAVEKLKQQ------------GLNAIFHQLDINDSDSINKFKQH-IEDTVGG-IDVLINNAGIAFKQ------------AAVEPAGVQAEVTVATNYFGTLHLCEALFPVL 404 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1296.2345.1 >prot_L-elsbetiae_contig1296.2345.1 ID=prot_L-elsbetiae_contig1296.2345.1|Name=mRNA_L-elsbetiae_contig1296.2345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=363bp LRNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQback to top mRNA from alignment at L-elsbetiae_contig1296:7584..9822- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1296.2345.1 ID=mRNA_L-elsbetiae_contig1296.2345.1|Name=mRNA_L-elsbetiae_contig1296.2345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2239bp|location=Sequence derived from alignment at L-elsbetiae_contig1296:7584..9822- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1296:7584..9822- >mRNA_L-elsbetiae_contig1296.2345.1 ID=mRNA_L-elsbetiae_contig1296.2345.1|Name=mRNA_L-elsbetiae_contig1296.2345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2178bp|location=Sequence derived from alignment at L-elsbetiae_contig1296:7584..9822- (Laminarionema elsbetiae ELsaHSoW15)back to top |