mRNA_L-elsbetiae_contig1296.2345.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1296.2345.1
Unique NamemRNA_L-elsbetiae_contig1296.2345.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: D8LLG8_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG8_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 1.110e-133
Identity = 229/370 (61.89%), Postives = 276/370 (74.59%), Query Frame = 1
Query:    1 LRNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHR--GTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTE-DGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGA---RMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEE-EEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPA-ATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQEFPAGKFYRHGQEIGW 1086
            LRNV++TGANRGLGFAIAD ML +G +RVVLACR++QEG  ALERLR  Q+QRR R  GT+ T  LAS  PLDV+CPRS+E FRE+CVN HLGGRVD+LFNNAGVC  E DG+  +        AAAAG LRETLAVNFFGAL V +AC+PAL +AA  VA     + A   E++ +   +  L PPTVVWISSG+GELCFLG+KWR LLA A++LE++KS +SDLLA+A  +    S  ++  PA  ++E  + + EEMAFGPTPAYSLSKAA NAAVR WAP +  P   A AP    S TG  GGGVRL+AVCPGDVLTRMT+ EE+ARGDAVSP+EAA  VV +A+S A + PAG+FYRHG+EIGW
Sbjct:   53 LRNVIVTGANRGLGFAIADRMLKLGSYRVVLACRNEQEGRDALERLRGKQQQRRQRQYGTIATNFLASFFPLDVTCPRSVEVFREDCVNGHLGGRVDILFNNAGVCFPEQDGNGPQNNR-----AAAAGILRETLAVNFFGALEVVEACVPALQAAAPMVARKEKKKAALMLEDNGATSTMTSLKPPTVVWISSGDGELCFLGSKWRGLLAEAQSLEDVKSPLSDLLATATDTITTTSKQNSTAPAGSQQEGEQGQVEEMAFGPTPAYSLSKAAVNAAVRTWAPCIQAPTVPAEAPENTKSRTGVRGGGVRLVAVCPGDVLTRMTSKEEMARGDAVSPEEAAVEVVDLALSSANDIPAGRFYRHGEEIGW 417          
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A835YS44_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS44_9STRA)

HSP 1 Score: 102 bits (255), Expect = 4.150e-21
Identity = 99/297 (33.33%), Postives = 135/297 (45.45%), Query Frame = 1
Query:  208 LDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGARMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRP-PAATAPTPGSSHTGGVGGGVR---LIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQEFPAGKFYRHGQEIGW 1086
            LDVS P S++ F   C+     G +  +FNNAGVCL                 A    L+ +L VNF+G L V +AC+P +                EE              VV +SSG+GEL +L +     L  A+ ++++++   D+L  A             DP +          E+AFG TPAYS+SKA  NAAVR        P PA  A   G + + G G   +   +IAVCPGDV T M + EE  R   +S  EAAA VV +A +  +    G FYR+G  I W
Sbjct:  105 LDVSSPDSIKHFATQCLPTLPSGSLTAVFNNAGVCLP---------------GADIATLQYSLGVNFYGPLRVMEACLPFMD---------------EEG------------VVVNVSSGDGELLWLNSDIAEALRQAQTVQDVRAAADDILQRAAL-----------DPGA----------ELAFGATPAYSVSKALLNAAVRCRHGIPYAPDPAEGALNAGRASSRGGGSTAQRPAVIAVCPGDVRTLMASEEEAQREGVLSALEAAAHVVGLA-TWRERTAGGLFYRYGAVIPW 337          
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A7S2XFG2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFG2_9EUKA)

HSP 1 Score: 84.7 bits (208), Expect = 6.980e-15
Identity = 115/362 (31.77%), Postives = 158/362 (43.65%), Query Frame = 1
Query:   13 VITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGARMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPAATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQ----EFPAGKFYRHGQEIGW 1086
            ++TG  RGLG+AIA+ M   G + VV+A R +  GN A   ++ +   R   GT+      S   LD+    S+ +FR+ C  +  GG VDVLFNNA VCL  +G N   A             R +  +N  G LA+ +  M             +M    E   S       T   V+ +SS EGEL +L +     L  A       S   D  A  R  E   S  ++ DP            E AFGPTP YS+SKAA  A  +  A R            G S          + AVCPGDV T M T E+     AVSP EA+  VV +A++  +    +   GKF+R+ +++ W
Sbjct:   24 IVTGGTRGLGYAIAERMARRG-YDVVIAGRDENIGNEAATNIQRSISTRGV-GTV------SYRKLDLENAESINNFRQWCRRNVEGG-VDVLFNNAAVCL--EGSNVEVA-------------RSSFQINVIGPLALVEGLMEQQ----------KMDDRRERRKS-------TQRCVINVSSSEGELGYLHSSLAEALLTA-------SASDDPQAVIRVLE---SIQNDFDPLL----------EYAFGPTPFYSVSKAALIALTQVLARR---------DPDGRSFA--------VHAVCPGDVSTSMMTPEQ--ESHAVSPAEASEDVVWLALAHPRRADGKLDHGKFWRYREQVEW 305          
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A7S1GWA1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GWA1_HEMAN)

HSP 1 Score: 83.2 bits (204), Expect = 1.300e-14
Identity = 90/276 (32.61%), Postives = 118/276 (42.75%), Query Frame = 1
Query:  268 LGGRV---DVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGARMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPAATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQEFPAGKFYRHGQEIGW 1086
            L GR+   D+L +NAGVCL E  D     H               + VNFFGAL +  A  PA                          M      VV ISSGEGEL +L ++ + LL   E+++E+   M   +  A   E                       E+AFGPTP+YS+SKA  NA  R  A            T GS H   +G    + AVCPGDV T M T +E  +   +SP++AA  VV +A+ P +E   G F+RH   I W
Sbjct:   67 LDGRLPVPDLLISNAGVCL-EGSDRSIFDH--------------AMQVNFFGALRMIRALAPA--------------------------MRRKGGCVVNISSGEGELVYLCSRLQELLPSIESVDELCRVMEACIDDAEGGE-----------------------ELAFGPTPSYSVSKAGLNALTRILA----------CSTRGSPHDHTLG----VRAVCPGDVDTAMCTLDE--KDGVLSPEQAAIDVVWVALHP-EECANGGFFRHRDSIPW 261          
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: L1IQ43_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IQ43_GUITC)

HSP 1 Score: 70.9 bits (172), Expect = 4.800e-11
Identity = 61/180 (33.89%), Postives = 83/180 (46.11%), Query Frame = 1
Query:  547 VVWISSGEGELCFLGAKWRRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPAATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQEFPAGKFYRHGQEIGW 1086
            ++ ISSG+GEL  L ++ +RLL   ++  +++S + +L                       E T    +E+AFGPTPAYS+SKAA N   R  A  +                      +R +AVCPGDV TRM +A E   GD V     AA  V  AI    E P+G FYR  + I W
Sbjct:   25 IINISSGDGELACLNSELQRLLKEVQSESDLESLLRELW----------------------EGTCLRGQELAFGPTPAYSVSKAALNVLTRIQAREIEMSQLK----------------LRAVAVCPGDVDTRMCSAGE---GDRVLTPAQAAGDVIWAIERPSECPSGGFYREREPIPW 163          
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A5B8XRJ5_9DELT (SDR family oxidoreductase n=1 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XRJ5_9DELT)

HSP 1 Score: 69.3 bits (168), Expect = 8.290e-10
Identity = 88/317 (27.76%), Postives = 123/317 (38.80%), Query Frame = 1
Query:    1 LRNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAATVAGARMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKWRRLLAHAE-NLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEEEEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPAATAPTPGSSHTGGVGGGVRLIAVCPGDVLTRM 948
            +R  V+TGANRGLG  +   +    +H V+L  R+ + G                   + T       PLDVS   S+ +F E   + H  GRVD+L NNAGV L  DG + R              +R+TLAVN++GA+ V +A  P L                            T   +V +SSG GEL  LG + R   +  +  L+++   M                         EE+   E   M   P+ AY +SK   NA  R  A       A+ +P             +R+ AVCPG V T M
Sbjct:    1 MRIAVVTGANRGLGLEVCRQLAQ-RDHHVILTARNAEAGQH-----------------MATKYGFEFRPLDVSDVESVNNFAERVQDKH--GRVDILVNNAGVAL--DGFDLR-------------VVRDTLAVNYYGAVRVTEALKPFLG---------------------------TDARIVNVSSGMGELACLGLELRERFSDPDLTLDDLNKLMLKF----------------------EEDVAFESHVMKGWPSSAYRVSKVGLNAYTRILAREFE---ASESP-------------IRVNAVCPGSVRTDM 217          
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: UPI001E61C1A8 (oxidoreductase n=1 Tax=Nocardioides sp. R-C-SC26 TaxID=2870414 RepID=UPI001E61C1A8)

HSP 1 Score: 67.0 bits (162), Expect = 8.330e-9
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 1
Query:    4 RNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGV 309
            R  V+TGAN G+G A+A+ +++ G H VV+ACR ++ G AA + +RA         +LP T+  +V  LD+S   S+  F EN     L G +DVL NNAGV
Sbjct:   27 RRFVVTGANSGIGLALAERLVESGAH-VVMACRDERRGEAAADTIRAT--------SLPGTVEVAV--LDLSDLASVRRFTEN-----LDGEIDVLVNNAGV 112          
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A016XJL0_9BURK (Short-chain dehydrogenase n=1 Tax=Hylemonella gracilis str. Niagara R TaxID=1458275 RepID=A0A016XJL0_9BURK)

HSP 1 Score: 65.9 bits (159), Expect = 1.000e-8
Identity = 54/154 (35.06%), Postives = 74/154 (48.05%), Query Frame = 1
Query:    4 RNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPALMSAAA 465
            R  ++TGAN+G+G+AIA  +   G  RV+L  R  Q G AA+  LRA              L  S   LDV+   S+ +       +H  GR+D+L NNAG+    D    +         A+  A R T+  NFFG LAV  A +P L +A A
Sbjct:    5 RIALVTGANKGIGYAIAQQLAKAGV-RVILGARDAQRGQAAVASLRAQ------------GLEVSAVALDVTDETSISAAAAVIQAEH--GRLDILVNNAGIFDPADAPPSK---------ASLAAARRTMETNFFGVLAVTQAMLPLLRAAPA 134          
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A561WXG8_9ACTN (Short-subunit dehydrogenase n=2 Tax=Micromonospora TaxID=1873 RepID=A0A561WXG8_9ACTN)

HSP 1 Score: 64.3 bits (155), Expect = 3.160e-8
Identity = 55/149 (36.91%), Postives = 66/149 (44.30%), Query Frame = 1
Query:    4 RNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPAL 450
            R  V+TGANRG+G A+   +LD G    VLACR    G AA   L             P      V  LDV    S+ +F     +    GRVDVL NNAG+    D D          A A  G +RE   VN  GAL V+ A +P L
Sbjct:    5 RTAVVTGANRGIGLAVVQQLLDRG-FVTVLACRDTGRGEAAAATL------------TPAPGRVLVRRLDVGDDDSVRAFAAGLAD--APGRVDVLVNNAGIHYDTDQDP---------AGADVGVVREAFEVNALGALKVSQAVLPLL 129          
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Match: A0A7J7BQT9_9COLE (Carbonyl reductase (NADPH) n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7BQT9_9COLE)

HSP 1 Score: 66.2 bits (160), Expect = 3.240e-8
Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 1
Query:   13 VITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQEQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNNAGVCLTEDGDNERKAHGTGAAAAAAGALRE-TLAVNFFGALAVADACMPAL 450
            V+TG N+G+GFAI   + D  + +V L  RS++ GN A+E+L+               L A  H LD++   S+  F+++ + D +GG +DVL NNAG+   +            AA   AG   E T+A N+FG L + +A  P L
Sbjct:  284 VVTGGNKGIGFAIVKGLCDKFKGKVYLTARSEKLGNEAVEKLKQQ------------GLNAIFHQLDINDSDSINKFKQH-IEDTVGG-IDVLINNAGIAFKQ------------AAVEPAGVQAEVTVATNYFGTLHLCEALFPVL 404          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1296.2345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLG8_ECTSI1.110e-13361.89Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
A0A835YS44_9STRA4.150e-2133.33Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A7S2XFG2_9EUKA6.980e-1531.77Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S1GWA1_HEMAN1.300e-1432.61Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
L1IQ43_GUITC4.800e-1133.89Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A5B8XRJ5_9DELT8.290e-1027.76SDR family oxidoreductase n=1 Tax=Bradymonadales b... [more]
UPI001E61C1A88.330e-942.16oxidoreductase n=1 Tax=Nocardioides sp. R-C-SC26 T... [more]
A0A016XJL0_9BURK1.000e-835.06Short-chain dehydrogenase n=1 Tax=Hylemonella grac... [more]
A0A561WXG8_9ACTN3.160e-836.91Short-subunit dehydrogenase n=2 Tax=Micromonospora... [more]
A0A7J7BQT9_9COLE3.240e-834.01Carbonyl reductase (NADPH) n=1 Tax=Abscondita term... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1296contigL-elsbetiae_contig1296:7584..9822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score399.4
Seed ortholog evalue1.7e-108
Seed eggNOG ortholog2880.D8LLG8
KEGG rclassRC00005,RC00049,RC00397,RC00709
KEGG koko:K07192,ko:K13646
KEGG ReactionR03376,R03380,R04491
KEGG Pathwayko00310,ko00514,ko04910,map00310,map00514,map04910
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
EC1.14.11.4,2.4.1.50,2.4.1.66
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko03036,ko04131,ko04147
Exons4
Model size1089
Cds size1089
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1296.2345.1prot_L-elsbetiae_contig1296.2345.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1296 7584..9822 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815477.3879075-CDS-L-elsbetiae_contig1296:7583..77151622815477.3879075-CDS-L-elsbetiae_contig1296:7583..7715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1296 7584..7715 -
1691682917.0672035-CDS-L-elsbetiae_contig1296:7583..77151691682917.0672035-CDS-L-elsbetiae_contig1296:7583..7715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1296 7584..7715 -
1622815477.3979347-CDS-L-elsbetiae_contig1296:8011..83351622815477.3979347-CDS-L-elsbetiae_contig1296:8011..8335Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1296 8012..8335 -
1691682917.0885727-CDS-L-elsbetiae_contig1296:8011..83351691682917.0885727-CDS-L-elsbetiae_contig1296:8011..8335Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1296 8012..8335 -
1622815477.4117763-CDS-L-elsbetiae_contig1296:8639..91581622815477.4117763-CDS-L-elsbetiae_contig1296:8639..9158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1296 8640..9158 -
1691682917.0973454-CDS-L-elsbetiae_contig1296:8639..91581691682917.0973454-CDS-L-elsbetiae_contig1296:8639..9158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1296 8640..9158 -
1622815477.4248092-CDS-L-elsbetiae_contig1296:9708..98221622815477.4248092-CDS-L-elsbetiae_contig1296:9708..9822Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1296 9709..9822 -
1691682917.1054952-CDS-L-elsbetiae_contig1296:9708..98221691682917.1054952-CDS-L-elsbetiae_contig1296:9708..9822Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1296 9709..9822 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1296.2345.1

>prot_L-elsbetiae_contig1296.2345.1 ID=prot_L-elsbetiae_contig1296.2345.1|Name=mRNA_L-elsbetiae_contig1296.2345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=363bp
LRNVVITGANRGLGFAIADYMLDIGEHRVVLACRSQQEGNAALERLRANQ
EQRRHRGTLPTTLLASVHPLDVSCPRSLESFRENCVNDHLGGRVDVLFNN
AGVCLTEDGDNERKAHGTGAAAAAAGALRETLAVNFFGALAVADACMPAL
MSAAATVAGARMATTAEESTSAVMVMPLTPPTVVWISSGEGELCFLGAKW
RRLLAHAENLEEIKSHMSDLLASARASEKNASSNSNRDPASGEEETREEE
EEMAFGPTPAYSLSKAAANAAVRAWAPRLLRPPAATAPTPGSSHTGGVGG
GVRLIAVCPGDVLTRMTTAEEVARGDAVSPKEAAAAVVKIAISPAQEFPA
GKFYRHGQEIGW*
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mRNA from alignment at L-elsbetiae_contig1296:7584..9822-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1296.2345.1 ID=mRNA_L-elsbetiae_contig1296.2345.1|Name=mRNA_L-elsbetiae_contig1296.2345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2239bp|location=Sequence derived from alignment at L-elsbetiae_contig1296:7584..9822- (Laminarionema elsbetiae ELsaHSoW15)
CTGAGAAACGTGGTAATAACGGGAGCAAATCGAGGGCTCGGATTTGCCAT CGCAGATTATATGCTGGACATCGGCGAGCACCGCGTAGTACTCGCATGCC GGAGCCAACAAGAGGTGTGTTGGCAGGCAACGTATTCGGCTCTGCTCTGC TGTCGTATTTGCATTTGATTGAGTGTCTTGGAACAGCACAACCGGTTATC AACTTGCCAAACAACCGGTTTTCCGCCCAAAGGTTTCCATGTACTCTTCA ACGATCGGTGCCGCTCTATTTTACCGCAGCAGTATCCCCCTATCGCAAAC CTGACTCGGTTTAGTAGATTTAGTCGTCGGTACCCCGCTCATCTCTTCAG AGTTGTTGCAACGGAAGCTATGTATGTCTTCTGCACCATGATCGTCGTGT GTCCACATACCTACACCAGAGTAAGACTGACATGGAATATCACTGACAAG ATCTTGAGCGATACTGGCGTTGACGTTACATATCGGTCTTACCAGCTGTC CCCTTCACCCAACAGCAGCACTCTTCAGGCGAAGAAAACGTCGTCAATGT CCTCGACCTACATAAGTAACCGCCGCCAGCCGCCACCGTCGTTTCAACAC CGATGGTATCCTCGAGACGCCGTTTCTTGATTGATCGTCTTTAAAATACC ATACTGAACTGCAGGGGAACGCCGCGTTAGAGAGGCTACGGGCAAATCAG GAGCAGCGCCGACATCGCGGCACCCTACCAACGACCCTGCTCGCATCCGT CCACCCCCTAGATGTCTCCTGCCCCCGGAGCCTCGAGTCCTTCCGAGAGA ACTGCGTCAACGACCACCTAGGCGGTAGGGTTGATGTTCTGTTCAACAAT GCAGGGGTGTGCCTCACAGAGGACGGGGATAACGAAAGGAAAGCCCACGG CACGGGCGCGGCTGCCGCCGCCGCAGGAGCTCTCCGGGAAACTCTCGCGG TGAATTTTTTCGGCGCGCTCGCAGTCGCGGATGCATGCATGCCGGCTTTG ATGTCCGCAGCAGCAACGGTGGCTGGGGCGAGGATGGCCACTACGGCAGA AGAATCGACTTCCGCTGTGATGGTGATGCCGCTGACTCCGCCGACCGTTG TCTGGATTTCTAGTGGAGAGGGGGAGCTCTGTTTTCTCGGGGCTAAGTGG CGAAGGCTTCTAGCGCATGCCGAGAATCTCGAGGTTTGGTGTGCCTATGT TTGTGCTTGCAACTACATATACCGAGAACTAACGGGACAGAGCACAGATG CTTTACCGGCGCTACAATACAGTGCTGGGAAACATCCGCTGGAGAGTGAG CCTGTCCAAAGCCGTCCACGTTGTGGACTCCCGGGATTAAAATACCTCCC ATGTTGGGGGCGTTTTTAACATTACGCCACACACACAAGAGACGCCCTGT AGTTGGACAGACTCGCGACCAAAGTGTGCAACACTGCGCACACCGCCCGC CTTTCCTTTCCCCCCAACGTTTCTGCTACAACACCAGGAGATCAAGTCAC ACATGTCGGACCTCTTGGCCTCCGCAAGAGCGTCCGAAAAAAACGCCAGT AGCAACAGCAACAGGGATCCAGCATCAGGAGAGGAAGAAACCAGAGAGGA AGAAGAAGAGATGGCGTTCGGGCCCACTCCGGCCTACAGCCTCTCCAAGG CCGCCGCAAACGCCGCCGTTCGCGCGTGGGCGCCGCGGCTACTACGGCCA CCAGCCGCAACAGCGCCGACTCCAGGCAGCAGTCATACTGGCGGCGTGGG GGGCGGGGTGCGCCTCATCGCCGTTTGCCCCGGCGACGTCCTCACTCGGA TGACCACAGCTGTGAGTCCTGAGTCCCATCTGCCTCCGCCTCAATTGGTG TTCATCTAGCGGTGACTTACCTCCTTGTTTGCAAGGCCCAATTCGGATAC AGTAGTGCTTGTTCGAGACTTTCTGTGAATACTTCATGTACCACCAGTAC ATGATTTCAAGGAATTGAGCCTTGCGTTTTGTCCCCTCCGAAGTCGAGCG CTATTTATTCGTTGGCTTCGGGATTGGTTTGGAACGGTTCACGCCCGGCA ACCAATGGGGAGCTCCCCTCTGCACTGCTCCATTTTGCTTGCTGTGGGCG TCTACAGGAAGAAGTGGCTAGGGGAGACGCTGTTTCTCCCAAGGAGGCAG CAGCTGCGGTGGTGAAGATTGCTATAAGCCCGGCCCAGGAATTTCCCGCC GGAAAGTTTTACAGGCACGGACAGGAAATCGGGTGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1296:7584..9822-

>mRNA_L-elsbetiae_contig1296.2345.1 ID=mRNA_L-elsbetiae_contig1296.2345.1|Name=mRNA_L-elsbetiae_contig1296.2345.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2178bp|location=Sequence derived from alignment at L-elsbetiae_contig1296:7584..9822- (Laminarionema elsbetiae ELsaHSoW15)
CTGAGAAACGTGGTAATAACGGGAGCAAATCGAGGGCTCGGATTTGCCAT
CGCAGATTATATGCTGGACATCGGCGAGCACCGCGTAGTACTCGCATGCC
GGAGCCAACAAGAGCTGAGAAACGTGGTAATAACGGGAGCAAATCGAGGG
CTCGGATTTGCCATCGCAGATTATATGCTGGACATCGGCGAGCACCGCGT
AGTACTCGCATGCCGGAGCCAACAAGAGGGGAACGCCGCGTTAGAGAGGC
TACGGGCAAATCAGGAGCAGCGCCGACATCGCGGCACCCTACCAACGACC
CTGCTCGCATCCGTCCACCCCCTAGATGTCTCCTGCCCCCGGAGCCTCGA
GTCCTTCCGAGAGAACTGCGTCAACGACCACCTAGGCGGTAGGGTTGATG
TTCTGTTCAACAATGCAGGGGTGTGCCTCACAGAGGACGGGGATAACGAA
AGGAAAGCCCACGGCACGGGCGCGGCTGCCGCCGCCGCAGGAGCTCTCCG
GGAAACTCTCGCGGTGAATTTTTTCGGCGCGCTCGCAGTCGCGGATGCAT
GCATGCCGGCTTTGATGTCCGCAGCAGCAACGGTGGCTGGGGCGAGGATG
GCCACTACGGCAGAAGAATCGACTTCCGCTGTGATGGTGATGCCGCTGAC
TCCGCCGACCGTTGTCTGGATTTCTAGTGGAGAGGGGGAGCTCTGTTTTC
TCGGGGCTAAGTGGCGAAGGCTTCTAGCGCATGCCGAGAATCTCGAGGGG
AACGCCGCGTTAGAGAGGCTACGGGCAAATCAGGAGCAGCGCCGACATCG
CGGCACCCTACCAACGACCCTGCTCGCATCCGTCCACCCCCTAGATGTCT
CCTGCCCCCGGAGCCTCGAGTCCTTCCGAGAGAACTGCGTCAACGACCAC
CTAGGCGGTAGGGTTGATGTTCTGTTCAACAATGCAGGGGTGTGCCTCAC
AGAGGACGGGGATAACGAAAGGAAAGCCCACGGCACGGGCGCGGCTGCCG
CCGCCGCAGGAGCTCTCCGGGAAACTCTCGCGGTGAATTTTTTCGGCGCG
CTCGCAGTCGCGGATGCATGCATGCCGGCTTTGATGTCCGCAGCAGCAAC
GGTGGCTGGGGCGAGGATGGCCACTACGGCAGAAGAATCGACTTCCGCTG
TGATGGTGATGCCGCTGACTCCGCCGACCGTTGTCTGGATTTCTAGTGGA
GAGGGGGAGCTCTGTTTTCTCGGGGCTAAGTGGCGAAGGCTTCTAGCGCA
TGCCGAGAATCTCGAGGAGATCAAGTCACACATGTCGGACCTCTTGGCCT
CCGCAAGAGCGTCCGAAAAAAACGCCAGTAGCAACAGCAACAGGGATCCA
GCATCAGGAGAGGAAGAAACCAGAGAGGAAGAAGAAGAGATGGCGTTCGG
GCCCACTCCGGCCTACAGCCTCTCCAAGGCCGCCGCAAACGCCGCCGTTC
GCGCGTGGGCGCCGCGGCTACTACGGCCACCAGCCGCAACAGCGCCGACT
CCAGGCAGCAGTCATACTGGCGGCGTGGGGGGCGGGGTGCGCCTCATCGC
CGTTTGCCCCGGCGACGTCCTCACTCGGATGACCACAGCTGAGATCAAGT
CACACATGTCGGACCTCTTGGCCTCCGCAAGAGCGTCCGAAAAAAACGCC
AGTAGCAACAGCAACAGGGATCCAGCATCAGGAGAGGAAGAAACCAGAGA
GGAAGAAGAAGAGATGGCGTTCGGGCCCACTCCGGCCTACAGCCTCTCCA
AGGCCGCCGCAAACGCCGCCGTTCGCGCGTGGGCGCCGCGGCTACTACGG
CCACCAGCCGCAACAGCGCCGACTCCAGGCAGCAGTCATACTGGCGGCGT
GGGGGGCGGGGTGCGCCTCATCGCCGTTTGCCCCGGCGACGTCCTCACTC
GGATGACCACAGCTGAAGAAGTGGCTAGGGGAGACGCTGTTTCTCCCAAG
GAGGCAGCAGCTGCGGTGGTGAAGATTGCTATAAGCCCGGCCCAGGAATT
TCCCGCCGGAAAGTTTTACAGGCACGGACAGGAAATCGGGTGGTGAGAAG
AAGTGGCTAGGGGAGACGCTGTTTCTCCCAAGGAGGCAGCAGCTGCGGTG
GTGAAGATTGCTATAAGCCCGGCCCAGGAATTTCCCGCCGGAAAGTTTTA
CAGGCACGGACAGGAAATCGGGTGGTGA
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