mRNA_L-elsbetiae_contig12937.2328.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: D8LLF6_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLF6_ECTSI) HSP 1 Score: 265 bits (678), Expect = 1.410e-83 Identity = 124/129 (96.12%), Postives = 128/129 (99.22%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAIEDT 387 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHP AR+GSGRPQLVLLDHGLYRELTE+FRVDHCRLWKAMVFKDIPGVK+YCQRLNSG+MYHLLAAILCGRSWDAIEDT Sbjct: 366 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKKYCQRLNSGDMYHLLAAILCGRSWDAIEDT 494
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: W7TCN3_9STRA (Abc1 protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCN3_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.990e-41 Identity = 77/127 (60.63%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGR-PQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAI 378 G+ ATDV +R G+ L +VA LIS FCEQ+F G HCDPH ANVL+R KG R P LVLLDHGLY+EL +Q R+D+ LWKA+V KD+PGVK YCQ+LN+G MY LLAAIL RSWD I Sbjct: 535 GVCATDVPALRERGLPLDKVAHLISSVFCEQVFSSGFAHCDPHPANVLIR---GGHKGDPRAPVLVLLDHGLYKELPDQLRLDYASLWKALVLKDLPGVKYYCQKLNAGRMYSLLAAILTSRSWDDI 658
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: A0A7S1DP73_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1DP73_HEMAN) HSP 1 Score: 146 bits (369), Expect = 7.250e-40 Identity = 69/128 (53.91%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAIED 384 GL + D EG+ +GVS R A+LISE FC QMF H VHCDPH +N+LVR HP+ G G PQLVLLDHGLYREL F +++ RLWKA+VF D+ ++ CQ +G+MY LLA+++ R W+ I D Sbjct: 202 GLSSADAEGITGLGVSPERTAALISEVFCSQMFLHRFVHCDPHPSNLLVRRHPS---GGGSPQLVLLDHGLYRELDPDFVLEYSRLWKALVFGDVQAIRRQCQVFGAGDMYPLLASMIMARPWNDILD 326
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: A0A7C9ANH7_OPUST (ABC1 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ANH7_OPUST) HSP 1 Score: 140 bits (354), Expect = 6.470e-39 Identity = 69/135 (51.11%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARK---GSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGE-MYHLLAAILCGRSWDAIEDTYV 393 G+R DV+G+R MG+ V+ L+SEAF E +F+HG VHCDPH AN+LVRP P+ ++ G+ RPQLVLLDHGLY+EL R+++ LWK +VF D +KEY +L +GE +Y L A IL R W+ + DT V Sbjct: 6 GVRVDDVKGIRNMGIRPYDVSKLVSEAFAEMIFKHGFVHCDPHAANLLVRPLPSGKRSIFGTRRPQLVLLDHGLYKELDFSTRINYASLWKGLVFSDAKTIKEYSAKLGAGEDLYALFAGILTMRPWNRVIDTSV 140
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: A0A7C9APE9_OPUST (ABC1 domain-containing protein n=6 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9APE9_OPUST) HSP 1 Score: 140 bits (354), Expect = 8.700e-37 Identity = 69/135 (51.11%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARK---GSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGE-MYHLLAAILCGRSWDAIEDTYV 393 G+R DV+G+R MG+ V+ L+SEAF E +F+HG VHCDPH AN+LVRP P+ ++ G+ RPQLVLLDHGLY+EL R+++ LWK +VF D +KEY +L +GE +Y L A IL R W+ + DT V Sbjct: 284 GVRVDDVKGIRNMGIRPYDVSKLVSEAFAEMIFKHGFVHCDPHAANLLVRPLPSGKRSIFGTRRPQLVLLDHGLYKELDFSTRINYASLWKGLVFSDAKTIKEYSAKLGAGEDLYALFAGILTMRPWNRVIDTSV 418
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: A0A161Y616_DAUCS (ABC1 domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161Y616_DAUCS) HSP 1 Score: 138 bits (347), Expect = 2.690e-36 Identity = 65/135 (48.15%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKG---SGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGE-MYHLLAAILCGRSWDAIEDTYV 393 G + D++G+R +G+ VA+L+S+ F E MFRHG VHCDPH AN++VRPHP++++G +PQL+LLDHGLY+EL + R ++ LWKA+VF D +KE C +L +GE +Y L A IL R W+ + D V Sbjct: 260 GAQINDLKGIRGLGLRPVDVANLLSKTFAEMMFRHGFVHCDPHEANLIVRPHPSSKRGIFGKRKPQLILLDHGLYKELDVETRTNYAALWKALVFADANAIKENCVKLGAGEDLYPLFAGILTMRPWERVIDPAV 394
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: A0A8K0DLY8_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0DLY8_9ROSA) HSP 1 Score: 138 bits (347), Expect = 6.680e-36 Identity = 68/132 (51.52%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARK---GSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGE-MYHLLAAILCGRSWDAIED 384 G++ DV+G+R +GV VA L+S+AF E MFRHG VHCDPH AN+LVRP P++RK G +PQL+LLDHGLY++L Q R ++ LWKA+VF D +KE +L +GE +Y L A IL R W+ + D Sbjct: 284 GVQVNDVKGIRRLGVQPNDVAKLVSQAFAEMMFRHGFVHCDPHEANLLVRPLPSSRKTILGKRKPQLILLDHGLYKDLDFQTRTNYAALWKALVFADAKAIKENSVKLGAGEDLYALFAGILTMRPWNRVVD 415
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: A0A6P3ZFY4_ZIZJJ (putative ABC1 protein At2g40090 n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZFY4_ZIZJJ) HSP 1 Score: 136 bits (343), Expect = 2.900e-35 Identity = 67/135 (49.63%), Postives = 91/135 (67.41%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARK---GSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGE-MYHLLAAILCGRSWDAIEDTYV 393 G++ D++ +R +GV VA L+S+AF E MFRHG VHCDPH AN+LVRP P++RK G +PQL+LLDHGLY++L Q R ++ LWK +VF D +KE +L +GE +Y L A IL R W+ + DT V Sbjct: 284 GVQVNDLKSIRRLGVQPNEVARLVSQAFAEMMFRHGFVHCDPHAANLLVRPLPSSRKTILGKRKPQLILLDHGLYKDLDFQTRTNYAALWKGLVFADAKAIKENSVKLGAGEDLYALFAGILTMRPWNRVIDTAV 418
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: UPI000CED4783 (putative ABC1 protein At2g40090 n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED4783) HSP 1 Score: 131 bits (329), Expect = 2.980e-35 Identity = 64/135 (47.41%), Postives = 88/135 (65.19%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKG---SGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGE-MYHLLAAILCGRSWDAIEDTYV 393 G + DV +R +G+ VA L+SE+F E MF+HG VHCDPH AN+LVRP P++RKG +PQL+LLDHGLY+EL + R ++ LWK ++F D +KE +L +GE +Y L A IL R W+ + D V Sbjct: 6 GAQINDVRAIRRLGLQPREVAKLVSESFAEMMFKHGFVHCDPHAANLLVRPLPSSRKGILGKRKPQLILLDHGLYKELDCETRTNYAALWKGLIFADAKAIKENSVKLGAGEDLYALFAGILTMRPWNRVIDPAV 140
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Match: A0A067G0I5_CITSI (ABC1 domain-containing protein (Fragment) n=6 Tax=Citrus TaxID=2706 RepID=A0A067G0I5_CITSI) HSP 1 Score: 132 bits (331), Expect = 4.170e-35 Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 1 Query: 1 GLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARK---GSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGE-MYHLLAAILCGRSWDAIEDTYV 393 G + DV+ +R +G+ V+ L+S+AF E MF+HG VHCDPH AN+LVRP P+ +K G +PQL+L+DHGLY+EL + ++ LWKA++F D +KEY +L +GE +Y L A IL R W+ + D V Sbjct: 51 GAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAV 185 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12937.2328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12937.2328.1 >prot_L-elsbetiae_contig12937.2328.1 ID=prot_L-elsbetiae_contig12937.2328.1|Name=mRNA_L-elsbetiae_contig12937.2328.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp MRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSback to top mRNA from alignment at L-elsbetiae_contig12937:1742..3138+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12937.2328.1 ID=mRNA_L-elsbetiae_contig12937.2328.1|Name=mRNA_L-elsbetiae_contig12937.2328.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1397bp|location=Sequence derived from alignment at L-elsbetiae_contig12937:1742..3138+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12937:1742..3138+ >mRNA_L-elsbetiae_contig12937.2328.1 ID=mRNA_L-elsbetiae_contig12937.2328.1|Name=mRNA_L-elsbetiae_contig12937.2328.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=732bp|location=Sequence derived from alignment at L-elsbetiae_contig12937:1742..3138+ (Laminarionema elsbetiae ELsaHSoW15)back to top |