mRNA_L-elsbetiae_contig12930.2324.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: D7FLQ8_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ8_ECTSI) HSP 1 Score: 197 bits (500), Expect = 4.860e-56 Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 1 Query: 1 VFDYFINPENGEVVRWSDKVPTFAPSIGQSFASMVVPTTDLVRLTFLTELLVAMRRHVMLVGSVGTGKTSLVQGFLRDNAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 VFDYF+NPENGEV RWSDKVP+F PSIGQSFASMVVPTTDLVRL+FLTELLV M+RHVMLVGS GTGKTSLVQGFLR+ A D LLSCTINTSYYTDAAA+QRQLEQPLDK Sbjct: 2714 VFDYFVNPENGEVGRWSDKVPSFTPSIGQSFASMVVPTTDLVRLSFLTELLVGMKRHVMLVGSAGTGKTSLVQGFLREKASDTLLSCTINTSYYTDAAALQRQLEQPLDK 2823
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: F0XZT7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZT7_AURAN) HSP 1 Score: 124 bits (312), Expect = 1.050e-30 Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 1 VFDYFINPENGEVVRWSDKVPTFAPSIGQSFASMVVPTTDLVRLTFLTELLVAMRRHVMLVGSVGTGKTSLVQGFLRDNAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 VF+Y+++P GE+ W++KVPT+ P F+S+VVPT DLV LT LT+ LV RR VM VGS GTGKT LV+ FLR N D LS TIN +YYTDA A+QRQLEQP++K Sbjct: 2524 VFEYYVDPSTGELAEWAEKVPTYEPVGVVQFSSIVVPTADLVSLTTLTKALVERRRPVMFVGSAGTGKTILVREFLR-NLPDDSLSATINMNYYTDAQALQRQLEQPIEK 2632
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: A0A7S3XUP8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUP8_HETAK) HSP 1 Score: 103 bits (256), Expect = 9.790e-24 Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 1 VFDYFINPEN-GEVVRWSDKVPTFAPSIGQSFASMVVPTTDLVRLTFLTELLVAMRRHVMLVGSVGTGKTSLVQGFLRDNAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 VFDY + + EVV W+D+VP +AP F SMVVPT D RLT LT+LLV VMLVG GTGKT+L++ +LR A + + T+N ++YTDAAA+QRQLEQ +DK Sbjct: 36 VFDYAVALDRPNEVVAWADRVPAYAPVGEVPFHSMVVPTVDNARLTALTDLLVRKDHPVMLVGGAGTGKTTLLREYLR--AQEDRRAATLNLNFYTDAAALQRQLEQAIDK 144
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: A0A482SY26_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY26_9ARCH) HSP 1 Score: 95.5 bits (236), Expect = 1.850e-20 Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 1 VFDYFINPENGEVVRWSDKVPTFAPSIGQSFASMVVPTTDLVRLTFLTELLVAMRRHVMLVGSVGTGKTSLVQGFLRD--NAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 V D FI+P GE V W ++V A G S S++VPT + VR T+L LLV R VM VGS GTGKT LV +L ++ D++ T+N ++YTD+ A+Q+QLEQ +DK Sbjct: 562 VLDCFIDPLTGEAVPWQNQVSAAATGTGSSPGSLMVPTAETVRFTYLMGLLVKNSRPVMFVGSAGTGKTVLVSDYLNQLTSSEDSIKYATVNMNFYTDSLALQQQLEQHIDK 673
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: A0A6H5KA64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA64_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 2.980e-19 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 1 Query: 175 MLVGSVGTGKTSLVQGFLRDNAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 MLVGS GTGKTSLVQGFL + A D LLSCTINTSYYTDAAA+QRQLEQPLDK Sbjct: 1 MLVGSAGTGKTSLVQGFLSEKASDTLLSCTINTSYYTDAAALQRQLEQPLDK 52
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: A0A835YNN0_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN0_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.060e-18 Identity = 54/118 (45.76%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 1 VFDYFINPENGEVVRWSDKVPTF-APSIGQS-----FASMVVPTTDLVRLTFLTELLVAMRRHVMLVGSVGTGKTSLVQGFLR--DNAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 VFD F +P W+ KVP + A IG F+ + V TTD VRL+ L +LLV R +MLVG+ GTGKTS+++ +L D D LLS IN SYY+D+AA+Q++LE +DK Sbjct: 2370 VFDCFFDPAANAFASWATKVPPYVAVPIGTGAGETPFSQLSVATTDTVRLSTLMDLLVRRGRFMMLVGTAGTGKTSIIKNYLGGLDKDADGLLSVNINMSYYSDSAALQQELELHIDK 2487
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: A0A4D9CU04_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU04_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.700e-18 Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 4 FDYFINPENGEVVRWSDKVPTFAP-----SIGQSFASMV-VPTTDLVRLTFLTELLVAMRRHVMLVGSVGTGKTSLVQGFLR--DNAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 FDY+ + + + W+ +VP + P G++ S + V T D VRL+FL +LL RHVML G+ GTGKTS+++ +LR D D +LS T+N SYYTD+A +Q ++E LD+ Sbjct: 2629 FDYYFDVDTLSFLPWTARVPKYVPIPIGGGAGETALSQLQVATVDTVRLSFLIDLLAKKHRHVMLCGTAGTGKTSILREYLRNLDRDADKMLSSTVNMSYYTDSAKLQGEIELALDR 2745
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: D7FYT3_ECTSI (Dynein heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT3_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 3.230e-17 Identity = 47/117 (40.17%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 4 FDYFINPENGEVVRWSDKVPTFAP---SIGQS---FASMVVPTTDLVRLTFLTELLVAMRRHVMLVGSVGTGKTSLVQGFLR--DNAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 FDYF + ++ WS +VP + P +G F+ + V T D VR++++ LV + +MLVG+ GTGKTS+++ +LR D D LLS IN +Y+TD+AA+Q++LE +DK Sbjct: 2306 FDYFYDWQSDGFKDWSTQVPDYQPIPIGVGPGETPFSQLAVSTNDTVRMSYIMNKLVRRSKFLMLVGTAGTGKTSIIKEYLRSLDKDADGLLSVNINMNYFTDSAALQQELEMNIDK 2422
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: A0A2R5GB26_9STRA (Dynein heavy chain 2, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GB26_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.090e-16 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = 1 Query: 1 VFDYFINPENGEVVRWSDKVPTFAPSIGQSFASMVVPTTDLVRLTFLTELLVAMRRHVMLVGSVGTGKTSLVQGFLRDNAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 VFDYF ++ +V W + P F +V+PT D VR T++ L V L+GS GTGKT++++ FLR +G+ S TIN +YYTDAA +Q QLE +DK Sbjct: 2730 VFDYFYCTKSRALVPWLTMLDKHTPIAEVDFQDIVIPTIDSVRCTYVLRQLSRQHHPVCLIGSAGTGKTTVMREFLRTMSGE-FASATINVNYYTDAAVLQTQLEHHVDK 2838
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Match: UPI001FEE7B36 (dynein axonemal heavy chain 11 isoform X1 n=8 Tax=Siluroidei TaxID=1489793 RepID=UPI001FEE7B36) HSP 1 Score: 82.4 bits (202), Expect = 7.220e-16 Identity = 38/110 (34.55%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 1 VFDYFINPENGEVVRWSDKVPTFAPSIGQSFASMVVPTTDLVRLTFLTELLVAMRRHVMLVGSVGTGKTSLVQGFLRDNAGDALLSCTINTSYYTDAAAMQRQLEQPLDK 330 VFDY+++P+ + W++K+P+F + +++VPTT+ VR+ + LL+ + +MLVG VGTGKT++V L + +S ++ YY+ ++ +Q+ LE+PL+K Sbjct: 2409 VFDYYLDPQTRRFLPWAEKIPSFHMETDKPLQAVLVPTTETVRIQYFMRLLLESTQPLMLVGGVGTGKTTIVNDLLA-TLPETFVSASVPLHYYSTSSTLQKLLERPLEK 2517 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12930.2324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12930.2324.1 >prot_L-elsbetiae_contig12930.2324.1 ID=prot_L-elsbetiae_contig12930.2324.1|Name=mRNA_L-elsbetiae_contig12930.2324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp VFDYFINPENGEVVRWSDKVPTFAPSIGQSFASMVVPTTDLVRLTFLTELback to top mRNA from alignment at L-elsbetiae_contig12930:619..3363+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12930.2324.1 ID=mRNA_L-elsbetiae_contig12930.2324.1|Name=mRNA_L-elsbetiae_contig12930.2324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2745bp|location=Sequence derived from alignment at L-elsbetiae_contig12930:619..3363+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12930:619..3363+ >mRNA_L-elsbetiae_contig12930.2324.1 ID=mRNA_L-elsbetiae_contig12930.2324.1|Name=mRNA_L-elsbetiae_contig12930.2324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=720bp|location=Sequence derived from alignment at L-elsbetiae_contig12930:619..3363+ (Laminarionema elsbetiae ELsaHSoW15)back to top |