mRNA_L-elsbetiae_contig12922.2320.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A6H5L3Y4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y4_9PHAE) HSP 1 Score: 254 bits (650), Expect = 6.640e-72 Identity = 156/254 (61.42%), Postives = 173/254 (68.11%), Query Frame = 1 Query: 1 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADLKIAAASSALKRVPPVFRRKRPRPRGGATATSTAVPLSPPPTRGKQRPQPLAHSEGRQIR---------GGLAPTPHRNGDEDPKAAAATTGREARAVSRKLLRKRALRGARRRPVLVMRVAGAVLAAAGRGIGTVVLRAFRGLLPRRQDD 735 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSP LRAALKDLIVADDG+VQW+VLE LM DSNFLDQR+ AGGETRR PLDLS++FILSDEGAFVRSA+++DLK+AAASS RVP VFRR R G A +P G+ KAA T REARAVSR+LLR+RALRGAR RP+LV+RV AV AAAGRGIG +L AFRGLL RR + Sbjct: 693 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPPLRAALKDLIVADDGSVQWDVLEVLMSDSNFLDQRVGAGGETRRPPLDLSVDFILSDEGAFVRSAVMSDLKMAAASSVKSRVPCVFRRNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGDAAVSPSEGGEA--KAATTATEREARAVSRRLLRRRALRGARWRPILVVRVIAAVFAAAGRGIGMAILGAFRGLLSRRHGE 944
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: D7FNM7_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM7_ECTSI) HSP 1 Score: 143 bits (360), Expect = 1.510e-35 Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 1 Query: 1 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGET 228 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSP LRAALKDLIVADDG+VQW+VLE LM DSNFLDQR+ AGGET Sbjct: 147 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPPLRAALKDLIVADDGSVQWDVLEVLMSDSNFLDQRVGAGGET 222
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A846CLS1_9CYAN (AarF/ABC1/UbiB kinase family protein n=1 Tax=Moorena sp. SIO2C4 TaxID=2607824 RepID=A0A846CLS1_9CYAN) HSP 1 Score: 88.2 bits (217), Expect = 5.240e-15 Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDS-NFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312 LEG+AM +P F ++S YPYV +RLLTDPSP LRA+LKDL+ D G +W LE L+R++ N D I+ LD +L+FI SD GAF+R LV ++ Sbjct: 271 LEGIAMNVEPDFKVLSKAYPYVAKRLLTDPSPELRASLKDLLFKDGG-FRWNRLENLLRNAGNSPDYDINQ-------VLDQTLDFIFSDRGAFIREQLVNEI 365
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A835YQ71_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ71_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.360e-14 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 1 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRD 186 GELEGLAMTAD FNL+ VYPYV RRLLTDPSP LR AL++ ++ D G +W+V++ L+ D Sbjct: 464 GELEGLAMTADASFNLVGAVYPYVARRLLTDPSPRLRRALQEFVIDDSGLPRWDVIDTLLHD 525
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: UPI0016874598 (AarF/UbiB family protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI0016874598) HSP 1 Score: 86.3 bits (212), Expect = 3.210e-14 Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312 LEG+A+ DP F ++S YPY+ +RLLTDPSP LR +L+DL+ D G +W LE L+R+++ D+ LD +LEF+ SD G F+R +V +L Sbjct: 452 LEGIAINVDPNFKVLSKAYPYIAKRLLTDPSPQLRTSLRDLLFKD-GRFRWNRLENLLRNAS------DSDDYNLDTVLDQTLEFLFSDRGTFIRDRIVDEL 546
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A8J6UXU8_9CYAN (AarF/ABC1/UbiB kinase family protein n=1 Tax=Nodosilinea sp. FACHB-131 TaxID=2692832 RepID=A0A8J6UXU8_9CYAN) HSP 1 Score: 86.3 bits (212), Expect = 3.220e-14 Identity = 46/102 (45.10%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312 LEG+A+ DP F ++S YPYV +RLLTDPSP LRA+L+DL+ D G+ +W LE L+R++ D+ + R +D +LEF+ SD G+F+R +V +L Sbjct: 468 LEGIAINVDPDFKVLSKAYPYVAKRLLTDPSPELRASLQDLLFKD-GSFRWNRLENLLRNARSSDEY-----DMDRL-IDQTLEFLFSDRGSFLRDRIVGEL 562
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A8J7JXL4_9CYAN (AarF/ABC1/UbiB kinase family protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7JXL4_9CYAN) HSP 1 Score: 85.9 bits (211), Expect = 4.210e-14 Identity = 49/102 (48.04%), Postives = 66/102 (64.71%), Query Frame = 1 Query: 7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312 LEG+A+ DP F ++S YPYV +RLLTDPSP LRA+LKDL+ D G +W LE L++ N + + GE LD LEF+ S+ GAF+R+ LV +L Sbjct: 457 LEGIAIYIDPNFKVLSEAYPYVSKRLLTDPSPELRASLKDLLFKD-GRFRWNRLENLLK--NARNSQDYNSGEA----LDQGLEFLASERGAFIRTKLVDEL 551
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A6P0XK62_9CYAN (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0XK62_9CYAN) HSP 1 Score: 83.6 bits (205), Expect = 4.510e-14 Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRD-SNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312 LEG+A+ DP F ++S YPYV +RLLTDP+P LR +LKDL+ D G +W LE L+R+ SN D I LD +L+F+LS+ G F+R LV +L Sbjct: 90 LEGIAINVDPNFKVLSKAYPYVAKRLLTDPAPELRTSLKDLLFKD-GDFRWNRLENLLRNASNSDDYDISK-------VLDQALDFLLSERGDFIRVRLVEEL 184
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: UPI0018828E5A (AarF/ABC1/UbiB kinase family protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI0018828E5A) HSP 1 Score: 85.5 bits (210), Expect = 5.750e-14 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312 LEG+A+ DP F ++S YPYV +RLLTDPSP LRA+LKDL++ D G +W LE L+R++ D L +LEF+ SD G F+R L+ ++ Sbjct: 463 LEGIAINVDPNFKVLSKAYPYVAKRLLTDPSPRLRASLKDLLIKD-GNFRWNRLENLLRNAANSDDY------DLNKVLTQTLEFLFSDRGTFIREQLIEEI 557
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: UPI0017853455 (AarF/ABC1/UbiB kinase family protein n=1 Tax=Microcoleus sp. FACHB-SPT15 TaxID=2692830 RepID=UPI0017853455) HSP 1 Score: 85.1 bits (209), Expect = 7.800e-14 Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312 LEG+A+ DP F ++S YPYV +RLLTDPSP LRA+LKDL+ D G+ +W LE L+R++ + L+ +LEF+ S+ GAF+R LV ++ Sbjct: 481 LEGIAINVDPEFKVLSKAYPYVAKRLLTDPSPQLRASLKDLLFKD-GSFRWNRLENLLRNAG------SSSDYDLNQVLNQTLEFLFSERGAFIREQLVEEV 575 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12922.2320.1 >prot_L-elsbetiae_contig12922.2320.1 ID=prot_L-elsbetiae_contig12922.2320.1|Name=mRNA_L-elsbetiae_contig12922.2320.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp MTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEback to top mRNA from alignment at L-elsbetiae_contig12922:1673..4284+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12922.2320.1 ID=mRNA_L-elsbetiae_contig12922.2320.1|Name=mRNA_L-elsbetiae_contig12922.2320.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2612bp|location=Sequence derived from alignment at L-elsbetiae_contig12922:1673..4284+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12922:1673..4284+ >mRNA_L-elsbetiae_contig12922.2320.1 ID=mRNA_L-elsbetiae_contig12922.2320.1|Name=mRNA_L-elsbetiae_contig12922.2320.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig12922:1673..4284+ (Laminarionema elsbetiae ELsaHSoW15)back to top |