mRNA_L-elsbetiae_contig12922.2320.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12922.2320.1
Unique NamemRNA_L-elsbetiae_contig12922.2320.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A6H5L3Y4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y4_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 6.640e-72
Identity = 156/254 (61.42%), Postives = 173/254 (68.11%), Query Frame = 1
Query:    1 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADLKIAAASSALKRVPPVFRRKRPRPRGGATATSTAVPLSPPPTRGKQRPQPLAHSEGRQIR---------GGLAPTPHRNGDEDPKAAAATTGREARAVSRKLLRKRALRGARRRPVLVMRVAGAVLAAAGRGIGTVVLRAFRGLLPRRQDD 735
            GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSP LRAALKDLIVADDG+VQW+VLE LM DSNFLDQR+ AGGETRR PLDLS++FILSDEGAFVRSA+++DLK+AAASS   RVP VFRR R                                                G  A +P   G+   KAA   T REARAVSR+LLR+RALRGAR RP+LV+RV  AV AAAGRGIG  +L AFRGLL RR  +
Sbjct:  693 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPPLRAALKDLIVADDGSVQWDVLEVLMSDSNFLDQRVGAGGETRRPPLDLSVDFILSDEGAFVRSAVMSDLKMAAASSVKSRVPCVFRRNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGDAAVSPSEGGEA--KAATTATEREARAVSRRLLRRRALRGARWRPILVVRVIAAVFAAAGRGIGMAILGAFRGLLSRRHGE 944          
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: D7FNM7_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM7_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.510e-35
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 1
Query:    1 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGET 228
            GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSP LRAALKDLIVADDG+VQW+VLE LM DSNFLDQR+ AGGET
Sbjct:  147 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPPLRAALKDLIVADDGSVQWDVLEVLMSDSNFLDQRVGAGGET 222          
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A846CLS1_9CYAN (AarF/ABC1/UbiB kinase family protein n=1 Tax=Moorena sp. SIO2C4 TaxID=2607824 RepID=A0A846CLS1_9CYAN)

HSP 1 Score: 88.2 bits (217), Expect = 5.240e-15
Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 1
Query:    7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDS-NFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312
            LEG+AM  +P F ++S  YPYV +RLLTDPSP LRA+LKDL+  D G  +W  LE L+R++ N  D  I+         LD +L+FI SD GAF+R  LV ++
Sbjct:  271 LEGIAMNVEPDFKVLSKAYPYVAKRLLTDPSPELRASLKDLLFKDGG-FRWNRLENLLRNAGNSPDYDINQ-------VLDQTLDFIFSDRGAFIREQLVNEI 365          
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A835YQ71_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ71_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.360e-14
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query:    1 GELEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRD 186
            GELEGLAMTAD  FNL+  VYPYV RRLLTDPSP LR AL++ ++ D G  +W+V++ L+ D
Sbjct:  464 GELEGLAMTADASFNLVGAVYPYVARRLLTDPSPRLRRALQEFVIDDSGLPRWDVIDTLLHD 525          
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: UPI0016874598 (AarF/UbiB family protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI0016874598)

HSP 1 Score: 86.3 bits (212), Expect = 3.210e-14
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1
Query:    7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312
            LEG+A+  DP F ++S  YPY+ +RLLTDPSP LR +L+DL+  D G  +W  LE L+R+++      D+        LD +LEF+ SD G F+R  +V +L
Sbjct:  452 LEGIAINVDPNFKVLSKAYPYIAKRLLTDPSPQLRTSLRDLLFKD-GRFRWNRLENLLRNAS------DSDDYNLDTVLDQTLEFLFSDRGTFIRDRIVDEL 546          
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A8J6UXU8_9CYAN (AarF/ABC1/UbiB kinase family protein n=1 Tax=Nodosilinea sp. FACHB-131 TaxID=2692832 RepID=A0A8J6UXU8_9CYAN)

HSP 1 Score: 86.3 bits (212), Expect = 3.220e-14
Identity = 46/102 (45.10%), Postives = 68/102 (66.67%), Query Frame = 1
Query:    7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312
            LEG+A+  DP F ++S  YPYV +RLLTDPSP LRA+L+DL+  D G+ +W  LE L+R++   D+      +  R  +D +LEF+ SD G+F+R  +V +L
Sbjct:  468 LEGIAINVDPDFKVLSKAYPYVAKRLLTDPSPELRASLQDLLFKD-GSFRWNRLENLLRNARSSDEY-----DMDRL-IDQTLEFLFSDRGSFLRDRIVGEL 562          
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A8J7JXL4_9CYAN (AarF/ABC1/UbiB kinase family protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7JXL4_9CYAN)

HSP 1 Score: 85.9 bits (211), Expect = 4.210e-14
Identity = 49/102 (48.04%), Postives = 66/102 (64.71%), Query Frame = 1
Query:    7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312
            LEG+A+  DP F ++S  YPYV +RLLTDPSP LRA+LKDL+  D G  +W  LE L++  N  + +    GE     LD  LEF+ S+ GAF+R+ LV +L
Sbjct:  457 LEGIAIYIDPNFKVLSEAYPYVSKRLLTDPSPELRASLKDLLFKD-GRFRWNRLENLLK--NARNSQDYNSGEA----LDQGLEFLASERGAFIRTKLVDEL 551          
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: A0A6P0XK62_9CYAN (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0XK62_9CYAN)

HSP 1 Score: 83.6 bits (205), Expect = 4.510e-14
Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 1
Query:    7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRD-SNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312
            LEG+A+  DP F ++S  YPYV +RLLTDP+P LR +LKDL+  D G  +W  LE L+R+ SN  D  I          LD +L+F+LS+ G F+R  LV +L
Sbjct:   90 LEGIAINVDPNFKVLSKAYPYVAKRLLTDPAPELRTSLKDLLFKD-GDFRWNRLENLLRNASNSDDYDISK-------VLDQALDFLLSERGDFIRVRLVEEL 184          
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: UPI0018828E5A (AarF/ABC1/UbiB kinase family protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI0018828E5A)

HSP 1 Score: 85.5 bits (210), Expect = 5.750e-14
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 1
Query:    7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312
            LEG+A+  DP F ++S  YPYV +RLLTDPSP LRA+LKDL++ D G  +W  LE L+R++   D             L  +LEF+ SD G F+R  L+ ++
Sbjct:  463 LEGIAINVDPNFKVLSKAYPYVAKRLLTDPSPRLRASLKDLLIKD-GNFRWNRLENLLRNAANSDDY------DLNKVLTQTLEFLFSDRGTFIREQLIEEI 557          
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Match: UPI0017853455 (AarF/ABC1/UbiB kinase family protein n=1 Tax=Microcoleus sp. FACHB-SPT15 TaxID=2692830 RepID=UPI0017853455)

HSP 1 Score: 85.1 bits (209), Expect = 7.800e-14
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 1
Query:    7 LEGLAMTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLEALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADL 312
            LEG+A+  DP F ++S  YPYV +RLLTDPSP LRA+LKDL+  D G+ +W  LE L+R++        +        L+ +LEF+ S+ GAF+R  LV ++
Sbjct:  481 LEGIAINVDPEFKVLSKAYPYVAKRLLTDPSPQLRASLKDLLFKD-GSFRWNRLENLLRNAG------SSSDYDLNQVLNQTLEFLFSERGAFIREQLVEEV 575          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12922.2320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3Y4_9PHAE6.640e-7261.42Integrase catalytic domain-containing protein n=1 ... [more]
D7FNM7_ECTSI1.510e-3590.79ABC1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A846CLS1_9CYAN5.240e-1548.54AarF/ABC1/UbiB kinase family protein n=1 Tax=Moore... [more]
A0A835YQ71_9STRA1.360e-1461.29ABC1 family-domain-containing protein n=1 Tax=Trib... [more]
UPI00168745983.210e-1443.14AarF/UbiB family protein n=1 Tax=Pseudanabaena sp.... [more]
A0A8J6UXU8_9CYAN3.220e-1445.10AarF/ABC1/UbiB kinase family protein n=1 Tax=Nodos... [more]
A0A8J7JXL4_9CYAN4.210e-1448.04AarF/ABC1/UbiB kinase family protein n=2 Tax=Cyano... [more]
A0A6P0XK62_9CYAN4.510e-1446.60AarF/ABC1/UbiB kinase family protein (Fragment) n=... [more]
UPI0018828E5A5.750e-1444.12AarF/ABC1/UbiB kinase family protein n=1 Tax=uncla... [more]
UPI00178534557.800e-1444.12AarF/ABC1/UbiB kinase family protein n=1 Tax=Micro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12922contigL-elsbetiae_contig12922:1673..4284 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score131.0
Seed ortholog evalue7.8e-28
Seed eggNOG ortholog2880.D7FNM7
KEGG koko:K08869
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Exons4
Model size1436
Cds size729
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12922.2320.1prot_L-elsbetiae_contig12922.2320.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12922 1694..3598 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815475.309042-UTR-L-elsbetiae_contig12922:1672..16931622815475.309042-UTR-L-elsbetiae_contig12922:1672..1693Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12922 1673..1693 +
1691682915.9070785-UTR-L-elsbetiae_contig12922:1672..16931691682915.9070785-UTR-L-elsbetiae_contig12922:1672..1693Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12922 1673..1693 +
1622815475.3727186-UTR-L-elsbetiae_contig12922:3598..42841622815475.3727186-UTR-L-elsbetiae_contig12922:3598..4284Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12922 3599..4284 +
1691682915.966661-UTR-L-elsbetiae_contig12922:3598..42841691682915.966661-UTR-L-elsbetiae_contig12922:3598..4284Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12922 3599..4284 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815475.321062-CDS-L-elsbetiae_contig12922:1693..18301622815475.321062-CDS-L-elsbetiae_contig12922:1693..1830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12922 1694..1830 +
1691682915.9224358-CDS-L-elsbetiae_contig12922:1693..18301691682915.9224358-CDS-L-elsbetiae_contig12922:1693..1830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12922 1694..1830 +
1622815475.3340275-CDS-L-elsbetiae_contig12922:2139..22111622815475.3340275-CDS-L-elsbetiae_contig12922:2139..2211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12922 2140..2211 +
1691682915.9324992-CDS-L-elsbetiae_contig12922:2139..22111691682915.9324992-CDS-L-elsbetiae_contig12922:2139..2211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12922 2140..2211 +
1622815475.346403-CDS-L-elsbetiae_contig12922:2609..30661622815475.346403-CDS-L-elsbetiae_contig12922:2609..3066Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12922 2610..3066 +
1691682915.9413013-CDS-L-elsbetiae_contig12922:2609..30661691682915.9413013-CDS-L-elsbetiae_contig12922:2609..3066Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12922 2610..3066 +
1622815475.3583343-CDS-L-elsbetiae_contig12922:3535..35981622815475.3583343-CDS-L-elsbetiae_contig12922:3535..3598Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12922 3536..3598 +
1691682915.9504428-CDS-L-elsbetiae_contig12922:3535..35981691682915.9504428-CDS-L-elsbetiae_contig12922:3535..3598Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12922 3536..3598 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12922.2320.1

>prot_L-elsbetiae_contig12922.2320.1 ID=prot_L-elsbetiae_contig12922.2320.1|Name=mRNA_L-elsbetiae_contig12922.2320.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp
MTADPGFNLISVVYPYVCRRLLTDPSPSLRAALKDLIVADDGTVQWEVLE
ALMRDSNFLDQRIDAGGETRRAPLDLSLEFILSDEGAFVRSALVADLKIA
AASSALKRVPPVFRRKRPRPRGGATATSTAVPLSPPPTRGKQRPQPLAHS
EGRQIRGGLAPTPHRNGDEDPKAAAATTGREARAVSRKLLRKRALRGARR
RPVLVMRVAGAVLAAAGRGIGTVVLRAFRGLLPRRQDDGAAG*
back to top

mRNA from alignment at L-elsbetiae_contig12922:1673..4284+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12922.2320.1 ID=mRNA_L-elsbetiae_contig12922.2320.1|Name=mRNA_L-elsbetiae_contig12922.2320.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2612bp|location=Sequence derived from alignment at L-elsbetiae_contig12922:1673..4284+ (Laminarionema elsbetiae ELsaHSoW15)
GGTGAGCTGGAGGGGCTGGCCATGACCGCGGACCCTGGTTTCAATTTGAT ATCGGTGGTCTACCCCTACGTGTGTCGCAGGCTCCTCACCGACCCAAGCC CCTCCCTGCGAGCGGCTCTCAAGGACCTCATCGTGGCGGACGACGGCACG GTCCAGTGGTGAGATTTGTTGCTGGCGACCTGATGTTGCGGCTTTGCCGC GCTGCTTGTTAGCTTTTGCCTGCTTGCTTGCCTGGTCCGCGCTTTCTGGT GCGTGCTGCCTCGTGCGTGCTGCCTCGCGACAGAAAGGCGCGGCTGCGGT TCTTCTTTTCTGCTTGTTTTTCGTTTCGCCTTTTGGTCTTCTGCCTTTTT GTCGGTGGTCAAACGCGAAAATGTTCAGCTGCTGCAGTCAGGGCTACTAT ATACAGCCTGACAGCCGGCGAAGCCTTTTTCAAACCACGTTGTTTGGCTG GTTGGCCTATCGTGCAGGGAAGTGCTGGAGGCGCTGATGAGGGATTCTAA TTTTCTAGACCAACGAATCGACGCCGGCGGAGAGACGAGGTGAGTCACGC CGGAAGACGCTCTGACATGCTCTCCAAGATATTTTCAAAACCCACGAGTT GTTTCATGTATAAATACATACATAGATACCTCATCTGAACATCGTCCTAG TTTAGAGTTTGCAGCACCCGCTTGGAGGGCACCTGTGCGTTACTTCGCGA GGCGTATCTATCCGAGAGGCCCTCCTCTGTCTACCGGTAACACCCTGGCG AGTCTGCGGCGAAATGAAGAGGGGGATCAACAACCCCCGTTTGAGCGCAT GGGGGTGGGGCGCATATGTACCGACACCCGCAAGAGTTTTGTTCGGATAT CTTTGGTCAGCGCTCTGTCTCTCTGTCTTGGTGCCATGCACTACGAAAAT ATGCCTGCTCTCGCGTTCGTTTTCGCGCTCTCGGCAGGCGAGCGCCCTTG GACCTGTCCCTCGAGTTCATCCTTTCCGATGAGGGGGCATTCGTGAGATC GGCGCTTGTGGCTGACCTGAAGATCGCAGCGGCGTCTTCCGCCCTGAAGA GAGTCCCTCCTGTTTTTCGAAGAAAACGACCGAGACCAAGAGGAGGAGCT ACGGCCACCTCAACTGCCGTCCCCCTCTCGCCACCTCCCACACGAGGGAA GCAGCGGCCGCAGCCCTTGGCCCACTCGGAGGGTCGTCAAATCCGCGGTG GTTTGGCGCCCACTCCTCATCGTAACGGTGATGAGGACCCAAAAGCCGCA GCAGCAACAACCGGGAGAGAAGCACGAGCTGTCTCGCGGAAGCTACTGAG AAAACGGGCGTTGAGAGGCGCGCGTCGAAGGCCGGTTTTGGTCATGCGCG TCGCCGGAGCAGTTTTGGCGGCGGCAGGGCGTGGGATAGGCACGGTGAGA GATTGCGGATCGGGGACAGTATTATACACCGATAGAGAGTCTATTTTTGG GCGGAATACAGCGTACTAGATATGCAACCTCTCGTTGCCTCGCTCACGGC AAGCCAGATTGGAGGTATGGTAGAAGTACACGAGGGTGGCATGGAGGCGT ACGGCATGCCTCATGTGGTCATGCTCTTGCGAAACAGAGACAAACGAGCG CAATGTGCTCCAAGCGAACAGTGTTAGGAACAGATGCGTCTACCCAGCAC GTGCACGAAACGAAAAAATGTACGGAAGCAAAGCTTCTTTTTCGCGAATT TGTGAGTGCCTCTGTGTAGCGAGCGATTATCGCCCTTTTTGCTTATCCTG CACTGGCGAGCAGCTGGAAAAACTGGACTTCAAAAAAGCACGGTCGACTC CGACGTAGCTAATATGTGCGATCCCTGTCACGCACACAACCTCCCTTGGT GATAAAACGACAGGTTGTGCTCCGTGCGTTTCGAGGACTGCTTCCGCGGA GACAAGATGACGGAGCAGCGGGATAGCTCCAGTCCCCTGGCAGAGATGCT ACCGCTATGATCTCTTTGCGGCGCTCTTTTTGTCAGAGCTTCGGGGTTTA TAGAGCCATACCCGGATTTCCCCGTGGCCGGAAGAGGAATGGGTTGGCTT GTAGGACAGAGCACTGACGGCAACACGCAAGGTACCAGAAGTGTTAAACT CTACAGCAGGAATCGCGAATCGGTTTGACGTTGAACATGTTACATAGGCA GCGAGCGCTGCGTAAGTTTATTGACCCACTTTAAAGACAAACCGGAAGTC GGAGGCGTAAACCAATAGGCCAAATGCGGACAGTTTTCGTGCGTTTGGCC ACATTGGCCACAGCGCCGAGGGGAAGTCGACTCCAGCGCACCTCATGCCT CTATAGAACCACGGGAGCAACCACTTTACGGTGGCAATCGTTACTTTCAA AGGTGCAAGGTCGGAGCCAGGAGGCGCGGCCCGATGCTTGCTATGTAGAG AGAGGTGGAAGCGGTGAGAATCCAAGCGCCACATTGAATCGCTAGGGTCG TGAAGAAGTGCAAGCCACTGCTTGCTGCATGTAACTCAAAGATCAACGCG CACAGCGAAGCGAGAGAAGAAGAGGCACATTCCAATTTTCAAATTGGTTG TTGTCTCTGGCTTTCAAAAAAATTCGGCTACGCATAACCGTGACAGATTA CCCGTGACAGAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig12922:1673..4284+

>mRNA_L-elsbetiae_contig12922.2320.1 ID=mRNA_L-elsbetiae_contig12922.2320.1|Name=mRNA_L-elsbetiae_contig12922.2320.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig12922:1673..4284+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACCGCGGACCCTGGTTTCAATTTGATATCGGTGGTCTACCCCTACGT
GTGTCGCAGGCTCCTCACCGACCCAAGCCCCTCCCTGCGAGCGGCTCTCA
AGGACCTCATCGTGGCGGACGACGGCACGGTCCAGTGATGACCGCGGACC
CTGGTTTCAATTTGATATCGGTGGTCTACCCCTACGTGTGTCGCAGGCTC
CTCACCGACCCAAGCCCCTCCCTGCGAGCGGCTCTCAAGGACCTCATCGT
GGCGGACGACGGCACGGTCCAGTGGGAAGTGCTGGAGGCGCTGATGAGGG
ATTCTAATTTTCTAGACCAACGAATCGACGCCGGCGGAGAGACGAGGGAA
GTGCTGGAGGCGCTGATGAGGGATTCTAATTTTCTAGACCAACGAATCGA
CGCCGGCGGAGAGACGAGGCGAGCGCCCTTGGACCTGTCCCTCGAGTTCA
TCCTTTCCGATGAGGGGGCATTCGTGAGATCGGCGCTTGTGGCTGACCTG
AAGATCGCAGCGGCGTCTTCCGCCCTGAAGAGAGTCCCTCCTGTTTTTCG
AAGAAAACGACCGAGACCAAGAGGAGGAGCTACGGCCACCTCAACTGCCG
TCCCCCTCTCGCCACCTCCCACACGAGGGAAGCAGCGGCCGCAGCCCTTG
GCCCACTCGGAGGGTCGTCAAATCCGCGGTGGTTTGGCGCCCACTCCTCA
TCGTAACGGTGATGAGGACCCAAAAGCCGCAGCAGCAACAACCGGGAGAG
AAGCACGAGCTGTCTCGCGGAAGCTACTGAGAAAACGGGCGTTGAGAGGC
GCGCGTCGAAGGCCGGTTTTGGTCATGCGCGTCGCCGGAGCAGTTTTGGC
GGCGGCAGGGCGTGGGATAGGCACGGCGAGCGCCCTTGGACCTGTCCCTC
GAGTTCATCCTTTCCGATGAGGGGGCATTCGTGAGATCGGCGCTTGTGGC
TGACCTGAAGATCGCAGCGGCGTCTTCCGCCCTGAAGAGAGTCCCTCCTG
TTTTTCGAAGAAAACGACCGAGACCAAGAGGAGGAGCTACGGCCACCTCA
ACTGCCGTCCCCCTCTCGCCACCTCCCACACGAGGGAAGCAGCGGCCGCA
GCCCTTGGCCCACTCGGAGGGTCGTCAAATCCGCGGTGGTTTGGCGCCCA
CTCCTCATCGTAACGGTGATGAGGACCCAAAAGCCGCAGCAGCAACAACC
GGGAGAGAAGCACGAGCTGTCTCGCGGAAGCTACTGAGAAAACGGGCGTT
GAGAGGCGCGCGTCGAAGGCCGGTTTTGGTCATGCGCGTCGCCGGAGCAG
TTTTGGCGGCGGCAGGGCGTGGGATAGGCACGGTTGTGCTCCGTGCGTTT
CGAGGACTGCTTCCGCGGAGACAAGATGACGGAGCAGCGGGATAGGTTGT
GCTCCGTGCGTTTCGAGGACTGCTTCCGCGGAGACAAGATGACGGAGCAG
CGGGATAG
back to top