mRNA_L-elsbetiae_contig12911.2316.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: A0A6H5L011_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L011_9PHAE) HSP 1 Score: 202 bits (515), Expect = 4.480e-57 Identity = 103/145 (71.03%), Postives = 112/145 (77.24%), Query Frame = 2 Query: 2 DEEEGEGDEGMVHLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANFSKSCPGQGEKNMGPGGRHGGAPVKGRNSREADEGVGLIQIHLRSAHRCGTRCHGGHHSYLADANNDGRAESGGFSAIGSGAYSAA 436 DEE G+G VHLFRV ++ PVWCE+CEG LLGMRNQGFCCEACGMNVHRGCQLRANFSKSCPGQG K G G GGAP R SR+ +EGVGLIQIHLRSAHRCGTRCHGGHHSYL + E GG ++GSG YSAA Sbjct: 992 DEEPGKG---KVHLFRVKTFSAPVWCEICEGFLLGMRNQGFCCEACGMNVHRGCQLRANFSKSCPGQGRKGTG-GSEDGGAPEGNRKSRQIEEGVGLIQIHLRSAHRCGTRCHGGHHSYLDN-------ERGG--SMGSGTYSAA 1123
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: D7G411_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G411_ECTSI) HSP 1 Score: 196 bits (497), Expect = 1.180e-54 Identity = 99/143 (69.23%), Postives = 107/143 (74.83%), Query Frame = 2 Query: 8 EEGEGDEGMVHLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANFSKSCPGQGEKNMGPGGRHGGAPVKGRNSREADEGVGLIQIHLRSAHRCGTRCHGGHHSYLADANNDGRAESGGFSAIGSGAYSAA 436 +E E +G VHLFRV +Y PVWCE+C LLGMRNQGFCCEACGMNVHRGCQLRANFSKSCPGQG K G G G P R SRE +EGVGLIQIHLRSAHRCGTRC+GGHHSYL + E GGF +GSG YSAA Sbjct: 975 QEQEPGKGKVHLFRVKTYSAPVWCEICGRFLLGMRNQGFCCEACGMNVHRGCQLRANFSKSCPGQGRKGTG-GNEDDGGPEGNRRSREVEEGVGLIQIHLRSAHRCGTRCNGGHHSYLDN-------ERGGF--MGSGTYSAA 1107
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: A0A835ZCX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX8_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.360e-17 Identity = 51/110 (46.36%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 35 VHLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANFSK------SCPGQGEKNMGPGGRHGGAPVKGRNSREADE---GVGLIQIHLRSAHRCGTRC 337 VHLFR+ SY WC VC G LLG+ QGF CEACGM+VH CQ+RANFS + P A + G + E GVG I+I LRSAHRCG C Sbjct: 892 VHLFRLRSYARLTWCGVCGGALLGVYGQGFRCEACGMDVHERCQMRANFSTRLTLMPAAPATSNT----------ALIGGGDDDERSRLTTGVGTIEIALRSAHRCGAGC 991
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: A0A7S3ZVL8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVL8_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 6.000e-15 Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 38 HLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANFSKSCPGQGEKNMGPGGRHGGAPVKGRNSR-------------EADEGVGLIQIHLRS 313 HLFR+ SY TP WC VCE L++G+R+QGF CEACG++VH GCQL+A+ C G+ + P+ + R + +EGVG +++HL S Sbjct: 154 HLFRLQSYNTPQWCAVCEKLMMGLRHQGFRCEACGLSVHGGCQLKAHAVFDCVGKKPPPLETPQPSFDEPLVQGSPRAKRSPSGDAVFVDDVEEGVGRLELHLAS 258
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: A0A7S4E7F0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7F0_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 6.270e-15 Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 38 HLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANFSKSCPGQGEKNMGPGGRHGGAPVKGRNSR-------------EADEGVGLIQIHLRS 313 HLFR+ SY TP WC VCE L++G+R+QGF CEACG++VH GCQL+A+ C G+ + P+ + R + +EGVG +++HL S Sbjct: 154 HLFRLQSYNTPQWCAVCEKLMMGLRHQGFRCEACGLSVHGGCQLKAHAVFDCVGKKPPPLETPQPSFDEPLVQGSPRAKRSPSGDAVFVDDVEEGVGRLELHLAS 258
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: A0A6S8DK18_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8DK18_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.890e-13 Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 2 Query: 38 HLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANFSKSC 193 HLFR+ SY P WC VC+GLL+G+R+QGF CEACG++ H CQL+A+ S C Sbjct: 191 HLFRLTSYNRPTWCAVCDGLLVGIRHQGFKCEACGLDCHPDCQLKAHASYEC 242
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: UPI0002C3D7AC (diacylglycerol kinase, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=UPI0002C3D7AC) HSP 1 Score: 62.0 bits (149), Expect = 4.700e-8 Identity = 25/62 (40.32%), Postives = 40/62 (64.52%), Query Frame = 2 Query: 5 EEEGEGDEGMV---HLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANF 181 EE+G EGM H+ ++ ++ +P +C+VCE +L+G++NQG+ C+ CGM H C R N Sbjct: 75 EEKGFITEGMANKHHVMKLTTFTSPTYCQVCEDMLVGVKNQGYRCDLCGMTAHTNCLRRVNL 136
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: A0A2D4I5R7_MICLE (Phorbol-ester/DAG-type domain-containing protein (Fragment) n=1 Tax=Micrurus lemniscatus lemniscatus TaxID=129467 RepID=A0A2D4I5R7_MICLE) HSP 1 Score: 57.8 bits (138), Expect = 8.220e-8 Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 2 Query: 23 DEGMVHLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANFS 184 D+G HL+R+ + PV+C VCE LLLG+R QG CC C VH C +A S Sbjct: 11 DDGQ-HLWRLKHFNRPVYCNVCETLLLGLRKQGLCCTFCKYIVHERCARKAPLS 63
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: A0A7S2HVY3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HVY3_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.840e-7 Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 2 Query: 38 HLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRG 160 H F+ +YP+P +C++C GLL+G+ +QG C CGMNVHRG Sbjct: 69 HNFQDYTYPSPTYCDICNGLLVGLWSQGLRCSTCGMNVHRG 109
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Match: A0A452H3C5_9SAUR (Diacylglycerol kinase n=2 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452H3C5_9SAUR) HSP 1 Score: 59.3 bits (142), Expect = 4.120e-7 Identity = 28/60 (46.67%), Postives = 35/60 (58.33%), Query Frame = 2 Query: 14 GEG---DEGMVHLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANFS 184 GEG D+G H++R+ + PV+C VCE LLLG+R QG CC C H C RA S Sbjct: 92 GEGNMKDDGQ-HMWRLKHFNRPVYCNVCETLLLGLRKQGLCCTFCKFTAHERCARRAPLS 150 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12911.2316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12911.2316.1 >prot_L-elsbetiae_contig12911.2316.1 ID=prot_L-elsbetiae_contig12911.2316.1|Name=mRNA_L-elsbetiae_contig12911.2316.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp MVHLFRVMSYPTPVWCEVCEGLLLGMRNQGFCCEACGMNVHRGCQLRANFback to top mRNA from alignment at L-elsbetiae_contig12911:2463..4496- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12911.2316.1 ID=mRNA_L-elsbetiae_contig12911.2316.1|Name=mRNA_L-elsbetiae_contig12911.2316.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2034bp|location=Sequence derived from alignment at L-elsbetiae_contig12911:2463..4496- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12911:2463..4496- >mRNA_L-elsbetiae_contig12911.2316.1 ID=mRNA_L-elsbetiae_contig12911.2316.1|Name=mRNA_L-elsbetiae_contig12911.2316.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig12911:2463..4496- (Laminarionema elsbetiae ELsaHSoW15)back to top |