mRNA_L-elsbetiae_contig1290.2309.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1290.2309.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI) HSP 1 Score: 420 bits (1080), Expect = 1.550e-140 Identity = 243/317 (76.66%), Postives = 274/317 (86.44%), Query Frame = 1 Query: 1 AAAKKMRQRRSSSSVNNATATMRLSISDVVNVHGKEHHSAEKNRRESAENLXXXXXXXSLLQMGVAXXXXXXXXXXXXXXEAAAALEAAGDAGPIEKLQALLTKAKEKGMPAERLFEHFAPNGEASVTPAMFETALRELGQRAFDLDEVELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNNVDSKDDLNVAARKVARRRSSLRAVPIGKLIHQGSHFFWRSKETIDVAFHHNSNEALITISTRSIERVYNYPAIFIDATKIPVPKSEAVARANSIGQFDSMDQEEREEAIARALASLWAEYLQHR 951 AA + RQRRSSSS+NNATATMR+S+S VVNV+GK+ AEKNRRESA XXXXXXX XXXXXXXXXXXXX EAAAA+EAAGD P+EKLQ LLTKAKE+GM AERLFEHFAP GEASVTP MFE+ALR+LGQRAFDLDE+ELEHLVT FDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNN +SKD+LNVAARK+ARRRSSLRAVPIG+L+HQGS FFWRSKETIDVA H N++E L+TISTR ER YNYPAIF+D +KIPV K+EAVARAN++GQF+SM ++ER EA +A+ +L EYLQHR Sbjct: 17 AAVPRARQRRSSSSINNATATMRVSVSGVVNVNGKDSQEAEKNRRESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAAVEAAGDVSPVEKLQVLLTKAKERGMSAERLFEHFAPGGEASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNNAESKDELNVAARKIARRRSSLRAVPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTISTRCPERGYNYPAIFVDVSKIPVHKTEAVARANAVGQFESMSKDERREATDKAMTALRVEYLQHR 333
BLAST of mRNA_L-elsbetiae_contig1290.2309.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.280e-68 Identity = 152/416 (36.54%), Postives = 214/416 (51.44%), Query Frame = 1 Query: 280 PIEKLQALLTKAKEKGMPAERLFEHFAPNGEASVTPAMFETALRELGQRAFDLDEVELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNNVDSKDDLNVAARKVARRRSSLRAVPIGKLIHQGSHFFWRSKETIDVAFHHNSNEALITISTRSIERVYNYPAIFIDATKIPVPKSEA--------------------------VARANSIGQFDSMDQEEREEAIARALASLWAEYLQHRLKVPDEVNEPEEMERPGLGALTRTDSEDSSSSSDEGKDEKKVGRGERVGGTKALGGGDAVVVPGIGAGTGMVAWTTKPGQLTPQQRAEDKAKHRPFLVKLSTDKWDSLLCARNIVLQTPHRFEVAARKSSLADFRRASLEFGQLAKETEKLSTVAEQRTRKVQASI 1449 P+EKLQALLT AKE+GM AERLFE FAP G A++T FE ALREL + F L EL+ L+ FD + NG +EL EFM FC++IPSL W+AE+ARR++ VD + L AAR RRRS+ +AV +G+ IH FFWRS++ +DV H N E ++ ISTRS +R +P IF++A++IP+ +++ +A+ + + + +ER E L +EYL +RLKVPD+ N+P PGL A ++ +T P + A A PFL +LSTD S+LC R +++ P+RF A R+ S+ DFRRASLE +L ET L VAE + + ++ Sbjct: 30 PLEKLQALLTAAKERGMSAERLFEFFAPAGSATMTADDFERALRELSPQHFPLSAAELDELMAHFDANRNGRIELSEFMEFCMAIPSLAWKAERARRMSAVDGPEALTEAARNSERRRSTCKAVDLGEKIHDRKMFFWRSQQNLDVVLHENIGEGVVIISTRSFDRDLTFPPIFVEASRIPIARAQINKAVDDKELSVVDKRQAFPPQSHHAQIAKRQEGSRQEPISTQERAELYEATRKELISEYLLNRLKVPDDANKP-----PGLSAAAKSPKR-----------------------------------------------STSPKSVA----AAAMAAEAPFLQRLSTDGAGSVLCTRGLMVSKPYRFPTA-RRGSVDDFRRASLELQRLVGETSGLIDVAEAKAEEAGRTV 388
BLAST of mRNA_L-elsbetiae_contig1290.2309.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 8.130e-16 Identity = 103/408 (25.25%), Postives = 169/408 (41.42%), Query Frame = 1 Query: 379 VTPAMFETALRELGQRAFDLDEVELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR--LNNVDSKD---DLNVAARKVARRRSSLR----------------AVPIGKLIHQGSHFFWRSKETIDVAFHHNSNEALITI--STRSIERVYNYPAIFIDATKIPVPKSEAVARANSIG------QFDSMDQEEREEAIA-RALASLWAEYLQHRLKVPD--------EVNEPEEMERPGLGALTRTDSEDSSSSSDEGKDEKKVGRGERVGGTKALGGGDAVVVPGIGAGTGMVAWTTKPGQLTPQQRAEDKAKHRPFLVKLSTDKWDSLLCAR--NIVLQTPHRFEVAARKSSLADFRRASLEFGQLAKETEKLSTVAEQRTRKVQASIDSIAYGPSSGA 1482 +T A F+ L LG F++ E + D +G+G+++L EF FCL IPS+ W+AE+ARR L N +D +L AAR +A S V +GK+ ++G FFWR+K+ I+V N + + I S + + N + A ++ A+ + S G + + DQ++ ++A++ +A + A+Y+ HR+ +PD +V PEE PGL A G G+ TG A TK G A RP L++ + D+WD+LL + V P E R+S +F + +F + ++LS A +V ++ + + SS A Sbjct: 297 ITSASFQHGLATLG---FNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEDGDRELEKAARDMANETVSANDAAEGGLGGELAKLEPLVHLGKIFYRGEKFFWRTKDLIEVVVQLNEAKGFLAIPASAAAEAEILND----LKAKRLAAKTEHAMGGSGSRGGESDANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPDGNGNLLQPDVTRPEEEVNPGLPA------------------------------------------GGEGSSTGSGATKTKRGS----------AAARPGLMRTTFDEWDTLLFPNPPSRVEGVPKFAETKKRESYFQEFCSVTEKFEENRVRAQRLSGEAAAFAMQVSNTLAPLGHSASSPA 645
BLAST of mRNA_L-elsbetiae_contig1290.2309.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 1.250e-15 Identity = 67/254 (26.38%), Postives = 116/254 (45.67%), Query Frame = 1 Query: 271 DAGPIEKLQALLTKAKEKGMPAERLFEHFAPNGEASVTPAMFETALRELGQRAFDLDEVELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNNV----------DSKDDLNVAARKVARRRSSLRA------VPIGKLIHQGSHFFWRSKETIDVAFHHNSNEALITISTRSIERVYNYPAIFIDATKIPVPKSEAVARANSI------GQFDSMDQEEREEAIARALASLWAEYLQHRLKVPD 966 D+ P+E +++++ + KE G +LF F + TFDTDG+GT+EL EF+ +CL I ++ W+AE+ RR D + ++ AA ++A + + P+G LI++GS FWR+ E++ +A H N + I IST +P + +D+ I V +AV + G+ + ++ R + +A AS+ ++YL RLK+ D Sbjct: 105 DSTPVEAMRSIMVRGKEHGWTTSQLFGVF-----------------------------------LETFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGEVAQAQLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQRLPEDARAKLFDKARASVLSDYLLARLKLID 323
BLAST of mRNA_L-elsbetiae_contig1290.2309.1 vs. uniprot
Match: F0XWQ4_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWQ4_AURAN) HSP 1 Score: 77.0 bits (188), Expect = 2.160e-11 Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 304 LTKAKEKGMPAERLFEHFAPNG---EASVTPAMFETALRELGQRAFDLDEVELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR 570 ++ AKEKG+ +++F++F G + +TP FE A+++LG + + EL L+ FD D NGTV ++EF+ +CL IP+L W+AEK RR Sbjct: 1 MSNAKEKGLRVDQIFKYFKSEGAGDDDDITPDDFEAAMKKLG---WSISAGELAALIDHFDEDKNGTVSMEEFLHYCLHIPTLAWKAEKLRR 89
BLAST of mRNA_L-elsbetiae_contig1290.2309.1 vs. uniprot
Match: A0A7S2D074_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D074_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 8.760e-6 Identity = 61/240 (25.42%), Postives = 107/240 (44.58%), Query Frame = 1 Query: 280 PIEKLQALLTKAKEKGMPAERLFEHFA-PNGEASVTPAMFETALREL--GQRAFDLDEVELEHLVTTFD----TDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNNVD--------------SKDDLNVAARKVARRRSSLRAVPIGKLIHQGSHFFWRSKETIDVAFHHNSNEALITISTRSIERVYNYPAIFIDATKIPVPKS------EAVARANSIGQFDSMDQEEREEAIARAL 918 P+EKL +++KAKE G E +F F NGE + FE L++L GQ A D D+ + FD NG V+L EF + L + ++ W+AE+ R+ N+ S D++ V + + I ++ H G FFWRS+ +++ F I ++ + N IF+ + +I + + E+V+ + + +S D E + E ++ + Sbjct: 94 PVEKLDLIMSKAKESGKSYEAIFNEFRHENGEINFED--FEIGLKKLIKGQTA-DPDDTATKEFRVMFDYLDDNQSNG-VDLKEFQEYALKMKNVSWKAERIRQSNDFPGSLLNKAVVNPATFSNDEIKTKTCVVDKHHTDT----ITEVYH-GPKFFWRSQTKLELVFTQYEITNCIVVTAFHEKLQVNLDPIFLKSDQIMLVAARSEADHESVSTSKKNSKLESEDVERKAEYLSTCI 324
BLAST of mRNA_L-elsbetiae_contig1290.2309.1 vs. uniprot
Match: A0A5P1F0G7_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1F0G7_ASPOF) HSP 1 Score: 52.4 bits (124), Expect = 3.240e-5 Identity = 24/69 (34.78%), Postives = 41/69 (59.42%), Query Frame = 1 Query: 337 ERLFEHFAPNGEASVTPAMFETALRELGQRAFDLDEVELEHLVTTFDTDGNGTVELDEFMTFCLSIPSL 543 +R+F+ F NG+ ++ A ALR LG + D E++ ++ D+DG+G ++ +EF+TFC P L Sbjct: 2 QRIFKRFDTNGDGKISSAELGEALRTLGSTSTD----EIQSMMAELDSDGDGYIDYNEFVTFCKDNPGL 66 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1290.2309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1290.2309.1 >prot_L-elsbetiae_contig1290.2309.1 ID=prot_L-elsbetiae_contig1290.2309.1|Name=mRNA_L-elsbetiae_contig1290.2309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=494bp MRQRRSSSSVNNATATMRLSISDVVNVHGKEHHSAEKNRRESAENLKKQRback to top mRNA from alignment at L-elsbetiae_contig1290:3602..11763- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1290.2309.1 ID=mRNA_L-elsbetiae_contig1290.2309.1|Name=mRNA_L-elsbetiae_contig1290.2309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8162bp|location=Sequence derived from alignment at L-elsbetiae_contig1290:3602..11763- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1290:3602..11763- >mRNA_L-elsbetiae_contig1290.2309.1 ID=mRNA_L-elsbetiae_contig1290.2309.1|Name=mRNA_L-elsbetiae_contig1290.2309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2964bp|location=Sequence derived from alignment at L-elsbetiae_contig1290:3602..11763- (Laminarionema elsbetiae ELsaHSoW15)back to top |