mRNA_L-elsbetiae_contig129.2307.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: D7FMR1_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR1_ECTSI) HSP 1 Score: 1137 bits (2940), Expect = 0.000e+0 Identity = 1129/2207 (51.16%), Postives = 1238/2207 (56.09%), Query Frame = 1 Query: 298 ATLLSTGAAEVDAPDSS----KNLWPARTEGQSAGLPEAEGGWGHVDTNGLLEEDEEGDTHKGGAKAKGGS----------------DAGWGXXXXXXPASPSSRWAGAGRGEDVGFHRDDELGLESSRAEERXXXXXXXXXXXRADHGRDHNHDRVLIDLEDGEGGGGSNADPDTAGGLPGERSLYLAGARFDHYAAXXXXXXXXXXXXXXXXXXXXXTGTGAID--GMREEDEAGGAGLGRGEQDDASFEQSWDDLVEGVADEGVLHAHGRAGLPDPMRDDPDVLLDEAIAEES------GAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERVFPPLASQGSGQTLLEAMAHAVGARMGASPELLGHFVRAGGGDVGKAASLYLAMADEFVELRAMARCRAYRVNPPPSPLARPSVILLPRLIPAHDAPLLLVISLFLXXXXXXXXXXXXXXXXXXXXXXXXXXSERQGAREAAAGISARTADPALAPSALALAAESTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPGSVTSPGEIGETARRRGAEEQQEQELQPQALDEDFPSFEADPADLESGRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTKNSSHFEVIELLRVANRPLTLRLRRESRQAHLTRLLLEFSGLLERDWCRARRDDLQHSHGQHGQRQGQGQNAVHGDGXXXXXXXXXXXXXXXXXAGTAGRRIENMGVLLEQLAPLLDWNSESVAAVEPELRELLCVLLDADLRFDLSSSKYPHIVGGAVAAILQELLLHLPYEQAGLEA------------------PALAHRLALSTSVCARGACCALVAQTYSLPPLPRQLQLRGILSRLLHDRTPGVRGEAVKALALVASVADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLLAALDETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSNNTNNVPDMSDMSNARRETHALRCKVMPILLRLAGDTDWQVRVEIACRLDSLCVALGEQWSVVTVDILPALVGDADPDVRCEAIRCLPRLARILLGFAMSGYAEQEPASTPAAAL----AKSALSPASQQQQQQ-------------LGEEK---------SGSEQGTNSVPYSARTPEEGAGNPGVDSCGDVNSSQQPARE--AEEEERPVAVV----GSVVSCGEKKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSESRHVGGVSVRGRLTQAGQKARKGILGALMPAAACLVEDPAAEVRGTTAVTLGEMLRLMVGFEDYVATLGSSARKPPAALTHVSAGSGRGAGETNGGAGEGAATAAVHGGFDGDGXXXXXXXXXXXXXXXXXXXXXVTGQDEDEDGDAAREVTRGSVDASASGAGCLRGDGSGVGPRRRVCHGRVMQAAMAXXXXXXXXXXEAAMTAELIDLAGFETMGD--------EDDELDGGIGLGEGASGTTFAGAQRENEGEQEERAMGGLPFAKHNDVEAGGGAKDLVSLCDSTALLGGGGTCREDASCAGVEIPAEQETPARQDSSEERAAERSRDGHPVPHGTDN-GDDPAA----EAATSP---EEAMRARQHSGRTGRDDASAADPTRHLEGDGGEVTAAVEPSA-----------------ARGCGRAEAEIAEEDXXXXXXXXXGSLDSNDAVNGRDDLGEDAF---AAGSSATAGTGAXXXXXXAAADNMVSGNSDPL-----------IVLVTRLLLDADANVACTMLQALRPGEAPAGVEVG--GVAREADRVSSPGGSRKFQGDDQADAGSGGGGEFQEA--------VVAAGEGSGTPVPRRSCLLTPAQVGCVLPALAELYGSSLWRVRAAVAEALPSLVSCTLCNRLRHEVANLGRRMLLDEVDAVRRSAAEQLIMAARIDLDRCPARLLHHVPGACVRQSD-LPALASSVPLSPAPAXXXXXXXXXXXASGKEGRQAGGSVGGLDGE--SVGLATXXXXXXXXXXXXXXXXXXXXXXXXGGHGVDDSSSSRLEEPLVDRVAXXXXXXXXXXXXXXXXXXXXXPCSPQRRKGGAGDQDQGRGVREVAVQPMDRAGACGLWLRLVIVPLVAECMEGSYRTKLLALHMAQAAFRLGVTTPAVMSAVIVPVLLRGLCDRLPN 6504 +T ++T ++D D+ LWPA T G+ G+PEAEGGWGHVDTNGLL ED++ + K G A G + G SP G GR D G D GL VLIDLE+ S D + LPG R LYLAG R DHYAA G G +D G G G QDDA+F QSWDDLVEGVADEGVLH HGRAGLPDP+ + D LL+E ++ + G+GG E+ P +S G G TL+ AMA A+GAR GAS ELLGHF+RAGGGDV KAASLY MADEFVELR MAR R R AP XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXX + E QQ+ +L PQ LD DFPSFEADP DL +GRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTKNSSHFEVIELLRVANRPLTLRLR E Q + RLLLEFSGLLERDWCRARRD+ Q GQNA G G XXXXXXXXX TAGRRIENMGVLLEQLAPLLDW SE+VAAVEPELRELLCVLLDADLRFDLSS+KYPH VGGAVAAILQE ++G+E+ PALA RL LS SVCARGACCALVAQTYS+PPLPRQLQ RGILSRLLHDRTPGVRGEAVKALALVA+VADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRL+ L E++ XXXXXXXXXXXXXXXXXXXXXXXXXX RE HALRCKVMPIL+RLAGD DWQVRVEIACRLDSLCVALGEQWSVVT +ILPALV D DPDVRCEAIRCLPRLARILLGFAMSGYAEQ A+SAL LGEE + G + Y T A D G QQPAR+ E +R + V G + XXXXXXXXXXXXXXXXXXXXX S + GGV RGRLT AG+KARKGILGALMPAA CL++DPAAEVRGT AVTLGEMLRLMVGFEDYVATL S+AR XXXXXXXXXXXXXXXXXXXXX + + GD A +V G G PRRRVCHGR M+AA+AXXXXXXXXXXEAAMTAELIDLAGFET GD +D + G G T +G +++ EGE +GGLPFAKH+DV+AGG ++LV+LC+ ALL GG R + GVE PAE D P P GD P + + +T P ++ +R R +G +A R ++G A R + + +D GSL S+DAVNG DDLGE A G++A G XXXXXX IVLVTRLLLDADANVACTMLQ + GEA V G G + + ++ GG QG GEF+E TPV RRSCLLTPAQVGCVLPALAELYGS LWRVRAAVAEALPSLVS TLCN LR EV +L RRML D VDAVRRSAAEQLIMAARIDLDRCP RLLHHVPGAC Q LP+L+SS P+ A AG V L GE S LAT XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX P G GD R +P DRAGACGLWLRLV+VPLV EC+EGSYRTKLLALHM QAAFRLGVTTPAVMS+V+VPVLLRGL D LP Sbjct: 320 STFVATEGEDIDVRDNGGXXXXGLWPATT-GRGEGIPEAEGGWGHVDTNGLLHEDDDEEFEKKGRGAPEGGIXXXXXXXXXXXEGIVNGDLGLGMAPLSVSPLK---GGGRHRDAG----DADGLP------------------------------VLIDLEEEGAEEVSGGDDE----LPGARKLYLAGGRGDHYAAAAASTAG---------------GKGVVDETGDXXXXXXXXXGDSFGGQDDATFGQSWDDLVEGVADEGVLHGHGRAGLPDPL--ETDALLEEGRSDPAAPPPPDGSGGVGGADVMASDGRFERAGEEQEGGFPPQEQ--EQPVPGASSSGLGPTLVGAMAEAIGARRGASLELLGHFLRAGGGDVEKAASLYATMADEFVELREMARRRHIR------------------------APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQEVEGQQDDQLLPQELDVDFPSFEADPTDLATGRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTKNSSHFEVIELLRVANRPLTLRLRPEEEQGSIVRLLLEFSGLLERDWCRARRDEPQ------------GQNATDGSGNPGXXXXXXXXX-------TAGRRIENMGVLLEQLAPLLDWESEAVAAVEPELRELLCVLLDADLRFDLSSTKYPHFVGGAVAAILQE-------SRSGIESLPLIPIKSCRTSRPLSKPPALAQRLVLSNSVCARGACCALVAQTYSVPPLPRQLQFRGILSRLLHDRTPGVRGEAVKALALVAAVADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLVGVLGESTPRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXGREGHALRCKVMPILVRLAGDNDWQVRVEIACRLDSLCVALGEQWSVVTAEILPALVADIDPDVRCEAIRCLPRLARILLGFAMSGYAEQXXXXXXXXXXXXXXARSALGXXXXXXXXXXXXXXXXXXXXXXLGEEAFLVPSPVPPAAEAGGDSGKTYHGYTDANDADRSSRDETG--APEQQPARDDAGTEGQRSSSAVASESGQIGXXXXXXXTAGAATGADDSGVVGETGGDXXXXXXXXXXXXXXXXXXXXXXXXXSGYQGGV--RGRLTLAGRKARKGILGALMPAAGCLIDDPAAEVRGTAAVTLGEMLRLMVGFEDYVATLASTARSXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSDGGDGAVDV------------------GFGPRPRRRVCHGRAMRAAVAXXXXXXXXXXEAAMTAELIDLAGFETAGDGSDRTAGLDDADSKGAAGAAVQVMAPTTSGGEQQGEGE----VVGGLPFAKHDDVDAGG--RELVALCEPAALLEDGGGDRSE---EGVETPAEXXXXXXXX----XXXXXXDDYLPPPRSLSAAGDAPVSVSLEDDSTPPPDYDDVLRGRDRAG------GGSAGAERLVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDERLDLSL-RDDHDEEDCGGGGSLGSDDAVNGCDDLGEPLLPSNAPGATAVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVLVTRLLLDADANVACTMLQ-VAGGEATGCVGTGDAGDGQGHEGLAVGGGDCADQG-----------GEFRECGXXXXXXXXXXXXXXXXTPVLRRSCLLTPAQVGCVLPALAELYGSPLWRVRAAVAEALPSLVSSTLCNLLRDEVLHLSRRMLFDRVDAVRRSAAEQLIMAARIDLDRCPLRLLHHVPGACPGQDGGLPSLSSS------PSAAVAAVTTAGVAPDAGAGSAGSLVVPLKGEEESPQLATGXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGGAPAGDCLDVSGGGDGGGARSEGVPVEEPWDRAGACGLWLRLVVVPLVVECLEGSYRTKLLALHMTQAAFRLGVTTPAVMSSVVVPVLLRGLRDPLPK 2278
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: A0A6H5KXG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG2_9PHAE) HSP 1 Score: 757 bits (1955), Expect = 1.010e-237 Identity = 767/1447 (53.01%), Postives = 841/1447 (58.12%), Query Frame = 1 Query: 2683 ELLLHLPYEQAGLEAPALAHRLALSTSVCARGACCALVAQTYSLPPLPRQLQLRGILSRLLHDRTPGVRGEAVKALALVASVADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLLAALDETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSNNTNNVPDMSDMSNARRETHALRCKVMPILLRLAGDTDWQVRVEIACRLDSLCVALGEQWSVVTVDILPALVGDADPDVRCEAIRCLPRLARILLGFAMSGYAEQEPASTP----------------AAALAKSALSPASQQQQQQLG---------EEKSGSEQGT--NSVPYSARTP-EEGAGNPGVDSCGDVNSSQQPAREAEEEERPV----AVVGSVVSCGEKKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD-------------SESRHVGGVSVRGRLTQAGQKARKGILGALMPAAACLVEDPAAEVRGTTAVTLGEMLRLMVGFEDYVATLGSSARKPPAALTHVSAGSGRGAGETNGGAGEGAATAAVHGGFDGDGXXXXXXXXXXXXXXXXXXXXXVTGQDEDEDGDAAREVTRGSVDASASGAGCLRGDGSGVGPRRRVCHGRVMQAAMAXXXXXXXXXXEAAMTAELIDLAGFETMGD--------EDDELDGGIGLGEGASGTTFAGAQRENEGEQEERAMGGLPFAKHNDVEAGGGAKDLVSLCDSTALLGGGGTCREDASCAGVEIPAEQETPARQDSSEERAAERSR--DGHPVPHGTD-NGDDPAA----EAATSP---EEAMRARQHSGRTGRDDASAADPTRHLEGDGGEVTAAVEPSAARGCGRAEAEIAEEDXXXXXXXXXGSLDS----------NDAVNGRDDLGEDAFAAGSSATAGTGAXXXXXXAAADNMVSGNSD----------------PLIVLVTRLLLDADANVACTMLQALRPG------------------------------EAPAGVEVGGVAREADRVSSPGGSRKFQGDDQADAGSGGG----GEFQEAVVAAGEGSG----------TPVPRRSCLLTPAQVGCVLPALAELYGSSLWRVRAAVAEALPSLVSCTLCNRLRHEVANLGRRMLLDEVDAVRRSAAEQLIMAARIDLDRCPARLLHHVPGACVRQSD-LPALASSVPLSPAPAXXXXXXXXXXXASGK------EGRQAGGSVGGLDGESVGLATXXXXXXXXXXXXXXXXXXXXXXXXGGHGVDDSSSSRLEEPLVDRVAXXXXXXXXXXXXXXXXXXXXXPCSPQRRKGGAGDQD--------QGRGVREVAV---QPMDRAGACGLWLRLVIVPLVAECMEGSYRTKLLALHMAQAAFRLGVTTPAVMSAVIVPVLLRGLCDRLPNVRLSAARVAEDILSVAAISSWP 6570 +LLLHLPYEQA LEAPALAHRLALS SVCARGACCALVAQTYS+PPLPRQLQ RGILSRLLHDRTPGVRGEAVKALALVA+VADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGH L+ L ET+ XXXXXXXXXXXXXXXXXXXXXXXXXXX E HALRCKVMPIL+RLAGD DWQVRVEIACRLDSLCVALGEQWSVVT +ILPAL+ D DPDVRCEAIRCLPRLARILLGFAMSGYAEQ A A+SAL E G E + VP +A E G + G D +SS + A E++ PV G S G XXXXXXXXXX X XXXXAD S + GGV RGRLT AG+KARKGILGALMPAAACLV+DPAAEVRGT AVTLGEMLRLMVGFEDYVATL S+AR + V AG XXXXXXXXXXXXXXXXXXXXX + +DGD +V G G PRRRVCHGR M+AA+AXXXXXXXXXXEAAMTAELIDLAGFET GD +D + G G S T +G +++ EGE +GGLPFAKH+DV AGGG +LV+ C+ LL GG R + GVE TPA +DSSE+R+ ERS D P P GD P + + +T P ++ +R R +G + R ++G G XXXXXXXXX +DAVNG DDL E + ++ XXXXXX PLIVLVTRLLLDADANVA TMLQALRPG P+ VEV G EA+ G + QG + G G G GEF+E G TPV RRSCLLTPAQVGCVLPALAELYGS LWRVRAAVAEALPSLVS TLCN LR EV +L RRML D VDAVRRSAAEQLIMAARIDLDRCP RLLHHVPGAC Q LP+L+S XXXXXXXXXXX G +GES LAT XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX +R GGA +D G G R V +P DRAGACGLWLRLV+VPL+ EC+EGSYRTKLLALHM QAAFRLGVTTPAVMS+V+VPVLLRGL D LPNVRLSAARVA+DILSVAA+SSWP Sbjct: 8 QLLLHLPYEQAALEAPALAHRLALSNSVCARGACCALVAQTYSVPPLPRQLQFRGILSRLLHDRTPGVRGEAVKALALVAAVADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHHLVGVLGETTPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXEGHALRCKVMPILVRLAGDNDWQVRVEIACRLDSLCVALGEQWSVVTTEILPALIADTDPDVRCEAIRCLPRLARILLGFAMSGYAEQXXXXXXXXXXXXXXXXXXXXXMAPDPARSALGDXXXXXXXXXXXXXXXXXXXEAVPGDEAFVVPSPVPPAAEAGGESGETHDGYTDANDADSSSRDETGAPEQQ-PVRSDAGTEGPRSSSAVASESGQXXXXXXXXXXTAGAATGADDSGVVGHTGGDGXEVXXXXADAPPGGRMSAAAEGSGDGYQGGV--RGRLTLAGRKARKGILGALMPAAACLVDDPAAEVRGTAAVTLGEMLRLMVGFEDYVATLASTARTTS---SRVRAGXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSDDGDGTVDV------------------GFGPRPRRRVCHGRAMRAAVAXXXXXXXXXXEAAMTAELIDLAGFETAGDGGDRTAGLDDADSKGAAGAAVQVSAPTTSGGEQQGEGE----VVGGLPFAKHDDVNAGGG--ELVAFCEPAVLLEDGGGDRSE---EGVE------TPAGKDSSEKRSEERSSRSDDLPPPRSLGATGDAPVSVSLDDDSTPPPDYDDVLRGRDGAG------GGSTGAERLVDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAVNGCDDLREPLLPSNTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLIVLVTRLLLDADANVARTMLQALRPGWVPELGPGPGPKPYRPISXXXXXXXXTGGETPPSYVEVAGG--EANGGMGTGDAGDGQGHEGLGVGGGDGADRGGEFREGEGXXXGGXXXXXXXXXXXXTPVLRRSCLLTPAQVGCVLPALAELYGSPLWRVRAAVAEALPSLVSSTLCNLLRDEVLHLSRRMLFDRVDAVRRSAAEQLIMAARIDLDRCPLRLLHHVPGACPGQDGGLPSLSSXXXXXXXXXXXXXXXXXXXXXXXXXLVVPPRG----------EGESPPLATGXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKTPGGERESGGAPARDCLDVCGGGDGGGARSEGVHVEEPWDRAGACGLWLRLVVVPLMVECLEGSYRTKLLALHMTQAAFRLGVTTPAVMSSVVVPVLLRGLRDPLPNVRLSAARVADDILSVAAMSSWP 1358
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: A0A6H5L3J4_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3J4_9PHAE) HSP 1 Score: 297 bits (761), Expect = 9.360e-78 Identity = 435/1184 (36.74%), Postives = 472/1184 (39.86%), Query Frame = 1 Query: 355 LWPARTEGQSAGLPEAEGGWGHVDTNGLLEEDEEGDTHKGGAKAKGGS---------------DAGWGXXXXXXPASPSSRWAGAGRGEDVGFHRDDELGLESSRAEERXXXXXXXXXXXRADHGRDHNHDRVLIDLEDGEGGGGSNADPDTAGGLPGERSLYLAGARFDHYAAXXXXXXXXXXXXXXXXXXXXXTGTGAIDGMREEDEAGGAGLGR--GEQDDASFEQSWDDLVEGVADEGVLHAHGRAGLPDPMRDDPDVLLDEAIAEES-----GAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERVFPPLASQGSGQTLLEAMAHAVGARMGASPELLGHFVRAGGGDVGKAASLYLAMADEFVELRAMARCRAYRVNPPPSPLARPSVILLPRLIPAHDAPLLLVISLFLXXXXXXXXXXXXXXXXXXXXXXXXXXSERQGAREAAAGISARTADPALAPSALALAAESTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPGSVTSPGEIGETARRRG--------------------AEEQQEQELQPQALDEDFPSFEADPADLESGRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTK------------NSSHFEVIELLRVANRPLTLRLRR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESRQAHLTRLLLEFSGLLERDWCRARRDDLQHSHGQHGQRQGQGQNAVHGDGXXXXXXXXXXXXXXXXXAGTAGRRIENMGVLLEQLAPLLDWNSESV------AAVEPELRELLCVLLDADLRFDLSSSKYPHIVGGAVAAILQEL 2688 LWPA T G+ G+PEAEGGWGHVDTNGLL+ED+E KG +GG D G SP G GR D G D + VLIDLE+ S D G LPG R LYLAG R DHYAA G G +D + D G G+QDDA+ QSWDDLVEGVADEGVLH HGR GLPDP+ + D LL+E ++ + G+GG E+ P + S GQTL+ AMA A+GAR GAS ELLGHF+RAGGGDV KAASLY MADEFVELR MAR XXXXXXXXXXXXXXXXXXX + +GA EAA + R P + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GEIG + E QQ+ +L PQ LD DFPSFEADP DL +GRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTK NSSHFEVIELLRVANRPLTLRLRR E Q + RLLLEFSGLLERDWCRARRD+ Q GQN G GXXXXXXXXXXXX TA RRIENMGVLLEQLAPLLDW SE+V AAVEPELRELLCVLLDADLRFDLSS+KYPH VGGAVAAILQE+ Sbjct: 418 LWPATT-GRGEGIPEAEGGWGHVDTNGLLQEDDEDFEKKGRGAPEGGICSRSGGXXXXXEGIVDGDLGLGMAPLSVSPLE---GGGRHRDAG----------------------------------DADGFPVLIDLEEEGAEEVSGGD----GELPGARKLYLAGGRGDHYAAAAATAG----------------GKGVVDETGDSDXXXXRDDGDPFGDQDDATLGQSWDDLVEGVADEGVLHGHGRDGLPDPL--ETDALLEEGRSDPAAPPPDGSGGVGGADVMASDGRFERAGEVQGDYPPQEK---EQPVPGVLSSSLGQTLVGAMAEAIGARRGASLELLGHFLRAGGGDVEKAASLYTTMADEFVELREMARRXXXXXXX------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHPAAEVAIEEGALEAALADAPR---PGGSEEEQDRGEKFETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNVAGEIGSESSXXXXXXXXXXXXXXXXXPPPAEVVEAQQDDQLLPQELDVDFPSFEADPTDLATGRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTKVPNGGGRSIERWNSSHFEVIELLRVANRPLTLRLRRVGRERLLRRRAEMRALTRPHGVFGGALNGQKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPSLRGKMRRQDSFPLGDSRREAGGSSSVTGSCSGEAGRGQGNNGPGRSGRAPGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGVAGNWEAVEWAESCLLTSVVAAAADVRRRQQHCRAEACAAATITAAAPAFVPGEAAGIVPSATPAVDEEAAAKESGXXXXXXXXXDSLGKNSAGXXXXXXXIGGQDESASCATATEAGRDADKLPSPKVGDGEPAAGPPNMQAAGVVGNGSGQRGGFEESWRGEHGGGGGDGLPEEEQGSIVRLLLEFSGLLERDWCRARRDEPQ------------GQNTADGSGXXXXXXXXXXXX-------TASRRIENMGVLLEQLAPLLDWESEAVSIIEAVAAVEPELRELLCVLLDADLRFDLSSTKYPHFVGGAVAAILQEV 1498
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: A0A7S1GI33_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GI33_CYCTE) HSP 1 Score: 113 bits (283), Expect = 1.730e-22 Identity = 88/258 (34.11%), Postives = 125/258 (48.45%), Query Frame = 1 Query: 2695 HLPYE--QAGLEAPALAHRLALSTSVCARGACCALVAQTYSLPPLPRQLQLRGILSRLLHDRTPGVRGEAVKALALVAS-VADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLLAA-LDETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSNNTNNVPDMSDMSNARRETHALRCKVMPILLRLAGDTDWQVRVEIACRLDSLCVALGEQWSVVTVDILPALVGDADPDVRCEAIRCLPRLARILL 3456 HL + AG A+ HRLA S S+ AR C+L + P QLQLRG+++R LHD VR L +A V D+ AV WL+L+ ERA D + +R A++ + L A L + S S + +P +D + A E + L+CK++P+ RLA D VR+ +A + D LC ALG+ W V +D+L AL+GD D VR EAI C+PRL ++L Sbjct: 70 HLDFHGRHAGNRFLAVVHRLAASRSISARITACSLGPVLWGHLDRPHQLQLRGVITRALHDVDVMVRKSTAAVLHEIAELVFDSRAVPWLILMCERAMTDPEPQLRAAAMTLTWHLAEHLPNAFLGDASQG-------------------------------SRSVRRLPPKTDPTYA--EVYLLQCKLLPVATRLAEDRAPAVRLAVAAQCDRLCNALGDHWYSVIIDVLQALLGDGDERVRGEAILCVPRLTEVVL 294
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: B7G8Q5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8Q5_PHATC) HSP 1 Score: 115 bits (289), Expect = 7.270e-22 Identity = 86/244 (35.25%), Postives = 121/244 (49.59%), Query Frame = 1 Query: 2731 ALAHRLALSTSVCARGACCALVAQTYSLPPLPRQLQLRGILSRLLHDRTPGVRGEAVKALALVAS-VADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLLAA-LDETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSNNTNNVPDMSDMSNARRETHALRCKVMPILLRLAGDTDWQVRVEIACRLDSLCVALGEQWSVVTVDILPALVGDADPDVRCEAIRCLPRLARILL 3456 A+ HRLA S S+ AR C+L + P QLQLRG+++R LHD VR L VA V D+ V WL+L+ ERA D + +R A++ + L A L + S S +PD +D A + + L+CK++P+ RLA D VR+ +A + D LC ALG+ WS V +D+L A++ DAD VRCEA+ C+PRLA I+L Sbjct: 961 AVVHRLAASRSMSARITACSLGPVIWGHLDFPHQLQLRGVVTRALHDVEVIVRKATATVLHEVAELVFDSRCVPWLVLMCERAMTDPEPQLRSAAMTLTWHLAEHLPNAFLGDASQG-------------------------------SAYLRRLPDRNDPIFA--DVYLLQCKLLPVATRLAEDRSPSVRLAVAAQCDRLCYALGDHWSSVVIDVLLAMLSDADERVRCEAVLCVPRLADIVL 1171
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: A0A7S1VWL7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VWL7_9STRA) HSP 1 Score: 115 bits (288), Expect = 8.090e-22 Identity = 113/380 (29.74%), Postives = 161/380 (42.37%), Query Frame = 1 Query: 2476 GTAGRRIENMG-VLLEQLAPLLDWNSESVAAVEPELRELLCVLLDADLRFDLSSSKYPHIVG----------GAVAAILQELLLH---------------------LPYEQ-------------------AGLEAPALAHRLALSTSVCARGACCALVAQTYSLPPLPRQLQLRGILSRLLHDRTPGVRGEAVKALALVAS-VADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLLAA-LDETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSNNTNNVPDMSDMSNARRETHALRCKVMPILLRLAGDTDWQVRVEIACRLDSLCVALGEQWSVVTVDILPALVGDADPDVRCEAIRCLPRLARILL 3456 G A + +G VL ++ L D NS A + EL LC +LD D +LS + V G ++L+ ++L+ + EQ AG A+ HRLA S S+ AR C+L + P QLQLRG+++R LHD VR L +A V D+ AV WL+L+ ERA D + +R A++ + L A L + S S + +P +D + A E + L+CK++P+ RLA D VR+ +A + D LC ALG+ W + VD+L AL DAD VR EAI C PRLA I+L Sbjct: 450 GAASEILHRIGDVLHRNMSFLADPNSPPAALLRGELVAFLCDVLDIDSEMELSEDEAVSQVSSGEAGPINDLGPAGSLLKLIILNCSMMRSPECASLSEKVYDDGQMKEEQRRRFGSKKHMSGLDLHRFHAGNRFLAVVHRLAASRSISARVTACSLGPVLWGHLDFPHQLQLRGVITRALHDVDVIVRKATATVLHEIAELVFDSRAVPWLVLMCERAMTDPEPQLRAAAMTLTWHLAEHLPNAFLGDASQG-------------------------------SRSLRRLPPRTDPTFA--EVYLLQCKLLPVATRLAEDRAASVRIAVAAQCDRLCSALGDHWYNIIVDVLQALFSDADERVRGEAILCFPRLAEIVL 796
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: A0A1Z5JV25_FISSO (PDZ domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JV25_FISSO) HSP 1 Score: 112 bits (281), Expect = 5.220e-21 Identity = 83/244 (34.02%), Postives = 119/244 (48.77%), Query Frame = 1 Query: 2731 ALAHRLALSTSVCARGACCALVAQTYSLPPLPRQLQLRGILSRLLHDRTPGVRGEAVKALALVAS-VADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLLAA-LDETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSNNTNNVPDMSDMSNARRETHALRCKVMPILLRLAGDTDWQVRVEIACRLDSLCVALGEQWSVVTVDILPALVGDADPDVRCEAIRCLPRLARILL 3456 A+ HRLA S S AR C+L + P QLQLRG+++R LHD VR K L +A V D +V WL+L+ ER+ D + +R A++ + L A L + S S +P D + A E + L+CK++P+ RLA D VR+ +A + D LC ALG WS V +D L AL+ D+D VRCEA+ C+PRL++I++ Sbjct: 863 AVVHRLAASRSTSARITACSLGPVLWGHLDFPHQLQLRGVITRALHDVDVMVRKATAKVLHEIAELVFDPRSVPWLVLMCERSMTDPEPHLRSAAMTLTWHLAEHLPNAFLGDASQG-------------------------------SRYLRRLPSRDDPTFA--EVYLLQCKLLPVATRLAEDRSPSVRLSVAAQCDRLCDALGAHWSSVVIDTLLALLSDSDERVRCEAVACVPRLSQIVM 1073
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: A0A1Z5K9H7_FISSO (PDZ domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9H7_FISSO) HSP 1 Score: 112 bits (281), Expect = 6.080e-21 Identity = 83/244 (34.02%), Postives = 119/244 (48.77%), Query Frame = 1 Query: 2731 ALAHRLALSTSVCARGACCALVAQTYSLPPLPRQLQLRGILSRLLHDRTPGVRGEAVKALALVAS-VADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLLAA-LDETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSNNTNNVPDMSDMSNARRETHALRCKVMPILLRLAGDTDWQVRVEIACRLDSLCVALGEQWSVVTVDILPALVGDADPDVRCEAIRCLPRLARILL 3456 A+ HRLA S S AR C+L + P QLQLRG+++R LHD VR K L +A V D +V WL+L+ ER+ D + +R A++ + L A L + S S +P D + A E + L+CK++P+ RLA D VR+ +A + D LC ALG WS V +D L AL+ D+D VRCEA+ C+PRL++I++ Sbjct: 864 AVVHRLAASRSTSARITACSLGPVLWGHLDFPHQLQLRGVITRALHDVDVMVRKATAKVLHEIAELVFDPRSVPWLVLMCERSMTDPEPHLRSAAMTLTWHLAEHLPNAFLGDASQG-------------------------------SRYLRRLPSRDDPTFA--EVYLLQCKLLPVATRLAEDRSPSVRLSVAAQCDRLCDALGAHWSSVVIDTLLALLSDSDERVRCEAVACVPRLSQIVM 1074
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: A0A7S0UH36_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UH36_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.740e-20 Identity = 108/359 (30.08%), Postives = 153/359 (42.62%), Query Frame = 1 Query: 2509 VLLEQLAPLLDWNSESVAAVEPELRELLCVLLDADLRFDLS-----SSKYPHIVG-----GAVAAILQELLLHLPYEQ-------------------------------AGLEAPALAHRLALSTSVCARGACCALVAQTYSLPPLPRQLQLRGILSRLLHDRTPGVRGEAVKALALVAS-VADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLLAA-LDETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSNNTNNVPDMSDMSNARRETHALRCKVMPILLRLAGDTDWQVRVEIACRLDSLCVALGEQWSVVTVDILPALVGDADPDVRCEAIRCLPRLARILL 3456 VL + L D S A + EL LC +LDAD LS SS G GA ++L+ ++L+ + AG A+ HRLA S S AR C+L +S P QLQLRG+++R LHD VR L +A V D+ V WL+L+ ERA D + +R A++ + L A L + S S +P D A + + L+CK++P+ RLA D VR+ +A + + LC ALG+ WS V +D+L AL+ D+D VR EA+ C+PRLA I+L Sbjct: 30 VLQRMMTFLADPKSPPAAMLRGELIACLCDILDADTEMKLSDEDNMSSAQGEGAGPIADLGAAGSLLKLIILNCTVMRTMECERQRSKSRKAKEESGETKEDDSALTLHAGNRFLAVVHRLAASRSTSARITACSLGPVLWSRLDFPHQLQLRGVITRALHDVEVIVRKSTATVLHEIAELVYDSRCVPWLVLMCERAMTDPEPQLRSAAMTLTWHLAEHLPNAFLGDASKG-------------------------------SRYLRRLPSREDPIFA--DVYLLQCKLLPVATRLAEDRAPHVRLAVAAQCERLCDALGDHWSSVIIDVLVALLTDSDERVRGEAVLCVPRLADIVL 355
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Match: A0A1E7FMC6_9STRA (ARM repeat-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMC6_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.390e-19 Identity = 109/384 (28.39%), Postives = 163/384 (42.45%), Query Frame = 1 Query: 2473 AGTAGRRIENMGVLLEQLAPLL-DWNSESVAAVEPELRELLCVLLDADLRFDLSSSKY--------------PHIVGGAVAAILQELLLHLPY------EQ---------------------------------AGLEAPALAHRLALSTSVCARGACCALVAQTYSLPPLPRQLQLRGILSRLLHDRTPGVRGEAVKALALVAS-VADASAVRWLLLLGERASLDIDLSVRRASVDSLLQIGHRLLAA-LDETSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSNNTNNVPDMSDMSNARRETHALRCKVMPILLRLAGDTDWQVRVEIACRLDSLCVALGEQWSVVTVDILPALVGDADPDVRCEAIRCLPRLARILL 3456 + ++ + + +G +L+++ L D S A + EL LC +LDAD LS + P GA ++L+ ++L+ P EQ AG A+ HRLA S S AR C+L +S P QLQLRG+++R LHD VR L +A V D+ V WL+L+ ERA D + +R A++ + L A L + S S +P D A + + L+CK++P+ RLA D VR+ +A + + LC ALG+ WS V +D+L AL+ D+D VR EA+ C+PRLA I+L Sbjct: 480 SASSDKLLLQIGDVLQRMRTFLADPTSPPAAMLRGELIACLCDILDADTEMKLSEEENFATTQGGTQGGNAGPIADLGAAGSLLKLIILNCPIMRSPECEQISAEERNIDQEELRRRCSEKKEEYSSIDYHRLHAGNRFLAVVHRLAASRSTSARITACSLGPVLWSRLDFPHQLQLRGVITRALHDVEVIVRKSTATVLHEIAELVYDSRCVPWLVLMCERAMTDPEPQLRSAAMTLTWHLAEHLPNAFLGDASKG-------------------------------SQYLRRLPSREDPIFA--DVYLLQCKLLPVATRLAEDRAPHVRLAVAAQCERLCDALGDHWSSVIIDVLVALLSDSDERVRGEAVLCVPRLADIVL 830 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig129.2307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig129.2307.1 >prot_L-elsbetiae_contig129.2307.1 ID=prot_L-elsbetiae_contig129.2307.1|Name=mRNA_L-elsbetiae_contig129.2307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=2195bp AAAVTAVAAGAGWKEWTLPSGTPSSLRSTCRPDRQQQQHQHQHQHQHQYRback to top mRNA from alignment at L-elsbetiae_contig129:27491..50057+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig129.2307.1 ID=mRNA_L-elsbetiae_contig129.2307.1|Name=mRNA_L-elsbetiae_contig129.2307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=22567bp|location=Sequence derived from alignment at L-elsbetiae_contig129:27491..50057+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig129:27491..50057+ >mRNA_L-elsbetiae_contig129.2307.1 ID=mRNA_L-elsbetiae_contig129.2307.1|Name=mRNA_L-elsbetiae_contig129.2307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=13170bp|location=Sequence derived from alignment at L-elsbetiae_contig129:27491..50057+ (Laminarionema elsbetiae ELsaHSoW15)back to top |