mRNA_L-elsbetiae_contig129.2305.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig129.2305.1
Unique NamemRNA_L-elsbetiae_contig129.2305.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: D7G9J1_ECTSI (Chromosome 10 open reading frame 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9J1_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 1.160e-71
Identity = 179/267 (67.04%), Postives = 191/267 (71.54%), Query Frame = 1 
Query:  559 MASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAGDIKNELVKVRVCPQCARKLFRKKIEALRRXXXXXXXXXXXXXXXXXXA-----------DGARGGGEGIRKRQIDENGKRLLRGDSALGGGTEEGREGHGLVRQAVAAAXXXXXXXXXXXXXXXXXXXSRPSRWGDKIDPPQAAXXXXXXXXXXXXXXXXXXXXA---EASRQAWAGELERDRTAEDEMDDYLSSLLL 1317
            MA+KYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQER+DLHSYELNF+YKEAG +KNELVKVRVCPQCARKLFRKKIEALRR    XXXXXXXXXXXXXX                G          D+   R LR  SA         EGH L+RQAVAAA                   +RPSRWGD++D  +   XXXXXXXXXXXXXXXXXX     +ASR+AWAGELERDRTAEDEMDDYLSSLLL
Sbjct:    1 MAAKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERKDLHSYELNFKYKEAGAVKNELVKVRVCPQCARKLFRKKIEALRRQRKAXXXXXXXXXXXXXXXXXXXXXXXXXXSSPSGSVSATPDGNADDRHGRKLRETSA--------GEGHDLIRQAVAAAGGTQTDAKKR---------NRPSRWGDRLDSSERTAXXXXXXXXXXXXXXXXXXAMAGDDASRKAWAGELERDRTAEDEMDDYLSSLLL 250
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: L8GSW9_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSW9_ACACA)

HSP 1 Score: 160 bits (404), Expect = 5.090e-41
Identity = 83/173 (47.98%), Postives = 116/173 (67.05%), Query Frame = 1 
Query:  316 MNAYARHQELIRNYHRYHLDAKVPSSGAIEAKGLPGQKRLTDEEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAGDIKNELVKVRVCPQCARKLFRKK 834
            MNAY RHQ  IR+Y  Y+   K+P+        +P +   +D++ L++Q+RF+R + ED RA  +R          AWE R+A +YY+ L++EY +ADL+RYRE +VG+RWR EK+V+ GKGQF CG   C+ + DL SYE+NF+Y EAG+ KN LVK+R+CP CA KL  KK
Sbjct:    1 MNAYERHQRYIRDYVLYYGRGKLPA--------VPQKPTKSDDDILKQQYRFIRTE-EDDRADDSR---------EAWEKRLARRYYERLYREYCIADLTRYREGQVGMRWRVEKEVIIGKGQFICGNKHCEAKEDLKSYEVNFQYAEAGETKNALVKLRLCPPCAYKLNYKK 155
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: A0A7S1SWE2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SWE2_9CHLO)

HSP 1 Score: 153 bits (386), Expect = 1.360e-39
Identity = 81/182 (44.51%), Postives = 113/182 (62.09%), Query Frame = 1 
Query:  316 MNAYARHQELIRNYHRYH---LDAKVPSSGAIEAKGLPGQKRLTDEEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAGDIKNELVKVRVCPQCARKLFRKKIEALRR 852
            +NAY RH++ + +Y  ++   L ++ P    ++          TD ++++  HRF+R + +D                  WEV++A KYY  LFKEY LADLSRY+E K+G+RWRTEK+VVSGKGQF CG  +C  R+ L SYE+NF YKEAG+ K  LVK+RVCP+CA KL   + +A RR
Sbjct:   12 LNAYERHKKFVHDYLTFYGGKLPSREPGDATVK----------TDWDSVKEHHRFLRSEEDDKEL--------------TWEVKLARKYYAKLFKEYCLADLSRYKESKIGMRWRTEKEVVSGKGQFVCGNKQCGNRQGLGSYEVNFGYKEAGEHKQALVKLRVCPECADKLNYNRKKAYRR 169
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: A0A5J4XDC7_9CHLO (FRA10AC1 domain-containing (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XDC7_9CHLO)

HSP 1 Score: 154 bits (388), Expect = 3.280e-39
Identity = 85/177 (48.02%), Postives = 111/177 (62.71%), Query Frame = 1 
Query:  316 MNAYARHQELIRNYHRYHLDAKVPSSGAIEAKGLPGQKRLTDEEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAGDIKNELVKVRVCPQCARKLFRKKIEAL 846
            ++A+ RHQ L++N  +Y+     P    ++          TD + L+ Q+RFVR   +D+                +W+VRMA +YY  LFKEYA+ADLSRYRE KVGLRWRTE++VV GKGQF CGA  C ERR L SYE+NF YKEAG+ K  LVKVRVCP+ A +L  K+ + L
Sbjct:   25 LSAFDRHQSLMKNAIKYYRAQLPPEQQTVK----------TDYDVLKEQYRFVRTAEDDS--------------TDSWDVRMARRYYAKLFKEYAVADLSRYRESKVGLRWRTEREVVIGKGQFVCGAKGCDERRALASYEVNFAYKEAGERKQALVKVRVCPKHAMQLNHKQNQQL 177
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: A0A8K1C360_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C360_PYTOL)

HSP 1 Score: 155 bits (392), Expect = 3.490e-39
Identity = 92/177 (51.98%), Postives = 109/177 (61.58%), Query Frame = 1 
Query:  325 YARHQELIRNYH----RYHLDAKVPSSGAIEAKGLPGQKRLTDEEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAGDIKNELVKVRVCPQCARKLFRKKIEA 843
            + RHQEL+R Y       H DA                 R  D +ALRR  +F+RD  ED +    RG E        W+VRM+ +YY+ LF+EYALADLSRY E K+GLRWRTE++VVSGKGQF CG  RC ERR LHSYEL F Y E G+ K  LVKVR C  CARKLF KK++A
Sbjct:   25 HERHQELMRVYQDATQHEHADAT--------------DVRPEDLDALRRNFQFIRDDEEDIK----RGSED-------WQVRMSVRYYRQLFREYALADLSRYEEGKIGLRWRTEQEVVSGKGQFSCGNKRCDERRRLHSYELLFAYVEQGEKKRCLVKVRACEACARKLFYKKLKA 176
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: A0A5J4XDC1_9CHLO (FRA10AC1 domain-containing n=2 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XDC1_9CHLO)

HSP 1 Score: 154 bits (388), Expect = 2.670e-38
Identity = 85/177 (48.02%), Postives = 111/177 (62.71%), Query Frame = 1 
Query:  316 MNAYARHQELIRNYHRYHLDAKVPSSGAIEAKGLPGQKRLTDEEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAGDIKNELVKVRVCPQCARKLFRKKIEAL 846
            ++A+ RHQ L++N  +Y+     P    ++          TD + L+ Q+RFVR   +D+                +W+VRMA +YY  LFKEYA+ADLSRYRE KVGLRWRTE++VV GKGQF CGA  C ERR L SYE+NF YKEAG+ K  LVKVRVCP+ A +L  K+ + L
Sbjct:   76 LSAFDRHQSLMKNAIKYYRAQLPPEQQTVK----------TDYDVLKEQYRFVRTAEDDS--------------TDSWDVRMARRYYAKLFKEYAVADLSRYRESKVGLRWRTEREVVIGKGQFVCGAKGCDERRALASYEVNFAYKEAGERKQALVKVRVCPKHAMQLNHKQNQQL 228
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: A0A1Y1IE55_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IE55_KLENI)

HSP 1 Score: 152 bits (383), Expect = 1.120e-37
Identity = 86/180 (47.78%), Postives = 112/180 (62.22%), Query Frame = 1 
Query:  316 MNAYARHQELIRNYHRYHLDAKV-PSSGAIEAKGLPGQKRLTDEEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAGDIKNELVKVRVCPQCARKL-FRKKIEALR 849
            +NAY RH+  + +Y +++ D K  P    ++          TD + LR  +RF+R   +D             AD S WE R+A +YY  LFKEY +ADLSRY+E KVGLRWRTEK+VV+GKGQF CG     ER  L SYE+NF YKEAG+ KN LVK+R+CP+CA KL +RK+ E  R
Sbjct:   28 LNAYDRHKRFVEDYVKFYGDGKYEPPKAPVK----------TDSDILRESYRFLRSDEDD-------------ADTS-WEARLAKRYYDKLFKEYCIADLSRYKESKVGLRWRTEKEVVAGKGQFICGNKEHGERNGLRSYEVNFAYKEAGEEKNALVKLRLCPKCAYKLNYRKEKELAR 183
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: A0A2K1L108_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L108_PHYPA)

HSP 1 Score: 151 bits (382), Expect = 1.500e-37
Identity = 79/176 (44.89%), Postives = 113/176 (64.20%), Query Frame = 1 
Query:  316 MNAYARHQELIRNYHRYHLDAKVPSSGAIEAKGLPGQKRLTDEEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAGDIKNELVKVRVCPQCARKL-FRKKIE 840
            +NAY RH++ +R+Y + H       S   + + LP +   TD + LR  +RF+R + +D                 +WE R+A +Y+  LFKEY +AD+SRY+E+++GLRWRTEK+V+SGKGQFECG  +C  R  L SYE+NF Y EAG+ K  LVK+RVCP+C+ KL +RK+ E
Sbjct:   28 LNAYERHKQFMRDY-QAHYGFSAGVSAGQQHQVLPAK---TDRDTLRETYRFIRSEEDDLER--------------SWEQRLAKRYHDKLFKEYCIADMSRYKENRIGLRWRTEKEVISGKGQFECGNKKCTAREGLRSYEVNFAYSEAGENKQALVKLRVCPKCSYKLNYRKEKE 185
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: A0A835Z2P9_9STRA (Folate-sensitive fragile site protein Fra10Ac1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2P9_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.580e-37
Identity = 87/181 (48.07%), Postives = 116/181 (64.09%), Query Frame = 1 
Query:  316 MNAYARHQELIRNYHRYHLDAKVPSSGAIEAKGLPGQKRLTDEEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAG--DIKNELVKVRVCPQCARKLFRKKIEALRR 852
            M+AY +H+ L+R+Y    L  K    G     GLP     TD + L R ++F+RD             E A+A  S+WEVRMA KYY+ L KEYA+ DLSR+R+  VGLRWRTE +V+ GKGQ+ECGA  C  R DLHSYE+NF + +A   + +NELVKVR+C  CA+KL+ +K++ LRR
Sbjct:    1 MSAYDKHKRLMRSY----LQHKQEGGGG----GLPAGPE-TDMDILVRHNQFIRD-------------EEADAKSSSWEVRMALKYYQRLCKEYAICDLSRHRDGAVGLRWRTEGEVLGGKGQWECGARGCDARDDLHSYEVNFAFVDAATREARNELVKVRMCADCAQKLYYRKLKELRR 159
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BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Match: A0A7S2WRJ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRJ6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.290e-37
Identity = 76/142 (53.52%), Postives = 101/142 (71.13%), Query Frame = 1 
Query:  397 AIEAKGLPGQKRLTDEEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFKEYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYELNFRYKEAGDIKNELVKVRVCPQCARKL 822
            A++   LP  + +TD++ LR+ HRFV         H    L G E   ++WE RM+ KYYK LFKEYALAD+SRYRE K+GLRWRTE++VV GKGQF CG  +C  R  LHS+E+NF+YKE G ++NELVK+R+C +CA+K+
Sbjct:   11 AMDVGALP-TRTVTDQDVLRKHHRFV--------IHDE-DLSGME---NSWETRMSIKYYKKLFKEYALADMSRYREGKIGLRWRTEQEVVDGKGQFVCGNKKCDTRDGLHSFEVNFKYKEHGTVRNELVKLRLCRRCAKKM 139
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig129.2305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9J1_ECTSI1.160e-7167.04Chromosome 10 open reading frame 4 n=1 Tax=Ectocar... [more]
L8GSW9_ACACA5.090e-4147.98Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A7S1SWE2_9CHLO1.360e-3944.51Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A5J4XDC7_9CHLO3.280e-3948.02FRA10AC1 domain-containing (Fragment) n=1 Tax=Treb... [more]
A0A8K1C360_PYTOL3.490e-3951.98Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5J4XDC1_9CHLO2.670e-3848.02FRA10AC1 domain-containing n=2 Tax=Trebouxia sp. A... [more]
A0A1Y1IE55_KLENI1.120e-3747.78Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A2K1L108_PHYPA1.500e-3744.89Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A835Z2P9_9STRA1.580e-3748.07Folate-sensitive fragile site protein Fra10Ac1-dom... [more]
A0A7S2WRJ6_9STRA2.290e-3753.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig129contigL-elsbetiae_contig129:9229..16150 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score243.8
Seed ortholog evalue1.3e-61
Seed eggNOG ortholog2880.D7G9J1
Preferred nameFRA10AC1
KEGG koko:K01230,ko:K01363,ko:K13121
KEGG ReactionR05982,R06722
KEGG Pathwayko00510,ko00513,ko01100,ko04140,ko04141,ko04142,ko04210,ko04612,ko04621,ko04924,map00510,map00513,map01100,map04140,map04141,map04142,map04210,map04612,map04621,map04924
KEGG ModuleM00073,M00074
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Folate-sensitive fragile site protein Fra10Ac1
EggNOG OGsKOG1297@1,KOG1297@2759
EC3.2.1.113,3.4.22.1
COG Functional cat.S
CAZyGH47
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko01000,ko01002,ko03041,ko03110,ko04131,ko04147
Ec32 ortholog descriptionFolate-sensitive fragile site protein Fra10Ac1
Ec32 orthologEc-00_011460.1
Exons6
Model size2054
Cds size1179
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig129.2305.1prot_L-elsbetiae_contig129.2305.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig129 9370..15416 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815473.1828063-UTR-L-elsbetiae_contig129:9228..93691622815473.1828063-UTR-L-elsbetiae_contig129:9228..9369Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig129 9229..9369 +
1691682914.6334367-UTR-L-elsbetiae_contig129:9228..93691691682914.6334367-UTR-L-elsbetiae_contig129:9228..9369Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig129 9229..9369 +
1622815473.2611113-UTR-L-elsbetiae_contig129:15416..161501622815473.2611113-UTR-L-elsbetiae_contig129:15416..16150Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig129 15417..16150 +
1691682914.7060266-UTR-L-elsbetiae_contig129:15416..161501691682914.7060266-UTR-L-elsbetiae_contig129:15416..16150Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig129 15417..16150 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815473.1942997-CDS-L-elsbetiae_contig129:9369..95901622815473.1942997-CDS-L-elsbetiae_contig129:9369..9590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 9370..9590 +
1691682914.647059-CDS-L-elsbetiae_contig129:9369..95901691682914.647059-CDS-L-elsbetiae_contig129:9369..9590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 9370..9590 +
1622815473.2046604-CDS-L-elsbetiae_contig129:11303..114481622815473.2046604-CDS-L-elsbetiae_contig129:11303..11448Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 11304..11448 +
1691682914.6565225-CDS-L-elsbetiae_contig129:11303..114481691682914.6565225-CDS-L-elsbetiae_contig129:11303..11448Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 11304..11448 +
1622815473.2174387-CDS-L-elsbetiae_contig129:12313..124231622815473.2174387-CDS-L-elsbetiae_contig129:12313..12423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 12314..12423 +
1691682914.6654758-CDS-L-elsbetiae_contig129:12313..124231691682914.6654758-CDS-L-elsbetiae_contig129:12313..12423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 12314..12423 +
1622815473.2288594-CDS-L-elsbetiae_contig129:13273..133341622815473.2288594-CDS-L-elsbetiae_contig129:13273..13334Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 13274..13334 +
1691682914.6748326-CDS-L-elsbetiae_contig129:13273..133341691682914.6748326-CDS-L-elsbetiae_contig129:13273..13334Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 13274..13334 +
1622815473.2397654-CDS-L-elsbetiae_contig129:14218..143291622815473.2397654-CDS-L-elsbetiae_contig129:14218..14329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 14219..14329 +
1691682914.6840572-CDS-L-elsbetiae_contig129:14218..143291691682914.6840572-CDS-L-elsbetiae_contig129:14218..14329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 14219..14329 +
1622815473.2510734-CDS-L-elsbetiae_contig129:14885..154161622815473.2510734-CDS-L-elsbetiae_contig129:14885..15416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 14886..15416 +
1691682914.6929963-CDS-L-elsbetiae_contig129:14885..154161691682914.6929963-CDS-L-elsbetiae_contig129:14885..15416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig129 14886..15416 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig129.2305.1

>prot_L-elsbetiae_contig129.2305.1 ID=prot_L-elsbetiae_contig129.2305.1|Name=mRNA_L-elsbetiae_contig129.2305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=393bp
MSRRSEEYARLNAGGGYTQALTVGRGFSGAERRAVKQGGSRSSQPGGEKG
SGSSAGGTMNAYARHQELIRNYHRYHLDAKVPSSGAIEAKGLPGQKRLTD
EEALRRQHRFVRDQGEDTRAHQARGLEGAEADPSAWEVRMASKYYKLLFK
EYALADLSRYREDKVGLRWRTEKDVVSGKGQFECGALRCQERRDLHSYEL
NFRYKEAGDIKNELVKVRVCPQCARKLFRKKIEALRRQQQQQQQQQKRQQ
EEEEQADGARGGGEGIRKRQIDENGKRLLRGDSALGGGTEEGREGHGLVR
QAVAAAAAAPGAAGSGGTTPSAKKRSRPSRWGDKIDPPQAAAAAAAAAKS
EGSSGSSGAVGAEASRQAWAGELERDRTAEDEMDDYLSSLLL*
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mRNA from alignment at L-elsbetiae_contig129:9229..16150+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig129.2305.1 ID=mRNA_L-elsbetiae_contig129.2305.1|Name=mRNA_L-elsbetiae_contig129.2305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6922bp|location=Sequence derived from alignment at L-elsbetiae_contig129:9229..16150+ (Laminarionema elsbetiae ELsaHSoW15)
GAGGGAAGAGAGTGGAGAACCTAAAGGGCTTCAGAAGGTTCCTCGTAGTT
TTGTCTTCGTGGGAGTCCATTTATTTGCACGAGATCAGACACAGCAGCAG
CAGCAGCAGTGTGCAGTGTGCAGCACAGCGGGTGCACCACGATGTCTCGA
CGAAGCGAAGAGTATGCTCGCCTCAACGCCGGAGGAGGCTACACACAAGC
CCTCACGGTCGGCAGGGGATTTTCAGGCGCAGAAAGAAGGGCCGTGAAGC
AAGGTGGCAGCAGGAGTTCGCAGCCTGGCGGTGAAAAGGGTAGCGGCAGC
AGCGCCGGGGGCACGATGAATGCCTACGCCCGACACCAGGAGCTCATCCG
AAATTACCACAGGTATGATGTGTGTGTGCTGCAGGGAAGGCTCATGGTGT
GACTCGGTTGGTTCACTAAATATACACGTGTGGAGACGAATAGGGTCTCG
GATCTCCGTGCGCGCTGGCACACGATGCACACTATTCTCCGTGAACACTG
CTACGTATCTACTGGTGTAGACTAGATAGTCTAGATACACAGGCCTTGAC
GCTGGTGGCGGAGCACGGACAGCATAGGGAGAAATACAAGGTTGCTCTGT
GGGATGTAGGTTCGCCGACTTGCGCATTACAGGTCAAAGTCCAGATGTGA
GAAGTTGAGGGACGCCCGCCCACCCGATGTCTTGTGCCGCGTCTCCAAGT
TTAGCATATGCAGCGTTGAACTGCCTGCACATGGTTTTGTTAAATCGCTT
CCTCGGATAGTACGTGTACTCGTAGTCGAAACTACTCTTCGCAGGGGGTA
AGGTAATCTCATGTGTGTAGCCTTATCCAGTACGGGGCAAAGAATAATTA
AGTTTTCGAAACGGAGCAATACTTAGGCAGCGGTTAGGGGGTGTACTTTG
GATCCAGGGGCTCAGTGACGAGTACGACTGATTGTTTGAAATGTACATTT
TTTTGGGTATGCCAAAACCGACTGCACGGACCCTCCCAAAAGCACCCCTT
TCTAGTTCGACCCTATGGACAATGACATTAAGCGTAGCTTGGAAGCCAAC
TGAAATTCTGCCGCGTTTCGATGTAAGGGACAGGTTTCAAAAGCCGGAAG
GCTTTTTTTCTTGCCGGGGACGCATTTTTTGTGACCTGCTGCCGAGCACA
CAGAACCAAGCCCACCATAGCGAGCTGCCCTCTCCCTCGGCATCAAAGAG
CTATTATGGGGTAAATCCTTCACAATAATCCCCTGACGCGCAGGAGGGAT
TCAATCTCGTGCTACAAGTCCAGAACGCGTGTTGCTCAGGGACTGGTTGG
TCAGAAAATCCATATACCCTCATACCACCGGCGCTTTCTCGTCACAGAGT
TGCTACAGGTCTATGCTAGCCTATACGACACCTCTCTGCATACGACTGGC
TATGTCTGGCAACAATCCGCTTTCGATTTCATGGGGTGTAGGCCGAGTAT
TGCTGAATCTCCGGCCTCAACAAATACCAGCGGTGGTCAGCAGCATGATA
CACTTGGAGGTAGACGATTTATCCTTTTTCTTCAGGAAAGTGGCAACGAG
CAACGGTGCTTTCGCCACCAAAACTCCCCGCAACCAGCACCCTTCAAACC
CGAACATGCGACTATTCTTCGAGAAAGGCCTACACTGATCAATGGGTACC
CCTTACCGTACCCTTAAATACTTGCCCAGATTTGATGTTGTAGCTCTCCT
TTTTTACTTCCTTCCTTCCCTGCAATCAAGAATGGGTTGGGGGCGGGGAA
GATCACACCCGTGTGTGAGAGCCCAAGCGCTCTACGGCAGGCCACTGCCC
TCGTGCGAAGGAATTGGGGTATAATTGGTTTGCAGTATGAGCGAAAAAGC
CAAGTTGTCAGGAGCCATAGTCTACAGCTGCAGTGGTGCGTGGCTGACTT
ACCGCCGCTGTGTTGCCTCCTACCCAACAGAGACTGCCCTGGAAAGCGCT
AAGTTTGTGCCACATATGTTGGGCTTGAGCACTCAAGGTCGCGCCAGGTT
CTGTGTCTTCAGCCACCATTCTCTCTCTCTCTGTCGCCCGCGTTCTCTCT
CGTTGTTGTTGCCTTGGTGGTATAGGTACCATCTCGACGCCAAAGTGCCT
TCGTCGGGAGCGATAGAAGCCAAGGGCCTTCCCGGGCAGAAGCGGCTGAC
TGACGAGGAGGCGTTGCGGCGGCAACACCGGTTCGTGCGGGACCAAGGGG
AAGACACCCGGGCACACCAGGTGAAGCGATTGGCGGTTCACGTCACGCTC
CCGAGTTGATCCTCGGTAGTTTTAAGAGCTGACAGGCACGTGCAGCCGCC
CGCCGGCAAGATATTAAGGGCGGCCCCACATGGCGCTGCGATGGGTAGCT
TTTGGTTGTACACGAAAGGGCAGGGACAACGAGCTTCTTCGGCGTGTATC
TACGTACTCTCCGGATGTATCTAGAATGTAAAGTCCAGCTCCGGCGTGCT
CCTACGCTCGTGCGACCTGAAGAGTTATCGTACAAGTTCTTCCTCCCGGA
AAAAGCCCTTAGATAGCTCTTTAGAGCACATGTGGGGCCTCGGCGGACTC
AGCATGAGTTCCACGAAAAAAGTCCAGTGTGTGAACCCATCTGAACCGGG
AACGCTCCATGTACCATATACCTGGTTGGCGGGTTGCGCGGTCAAGTGCA
TTTGGAAGAGATAGCGTCGTGGCATGAAGAGAAAGCGACGCTCGGAAAGC
CAGACCTGGATCAGTCAGAAAGAGAATGCATCCCGCATGGATTGGCAGAG
ACATGCACGAGTCTGATGTGTGACAACAGAGGTTCGGCAGGGGATGTGGC
CCGATCCCTGGGTGTTGTCTTGGTGGCGCCTCCCGTAAACCCAAGCGGCA
TTAAACGATGAATTTACTTCGGGGAACTCAAAGGGTCTCCGAAAGATTTT
TGTTTCTTGACCGCCGCCTAGTGCATACCACGTAAATTTAAAATTTTGAT
TTCACCATTTTTGTCCGTTTCCTGCTGTTCGGGCTTTGCTATCTAGCTGA
CCCCCCCCCCCTCGTGTGCGCGTGCCCTGTCTGTGTGGCACGACCTCGAT
CTTGTCCCTTTGCTGGGATGCCAATATATCGCCAGGCAAGAGGGCTCGAA
GGGGCAGAGGCCGACCCCAGCGCTTGGGAGGTGCGCATGGCCTCCAAGTA
CTACAAGCTGCTCTTCAAGGAGTACGCCCTGGCCGACCTCTCACGGTGAC
CGACTAGCTGCCTGGCTCACTTGACCGCGCCCGTGTCCTTAACGGTGTCC
GCGTTCTTGTGCTTCGTAGATACCGTAATATTTGTTGTACATACACGCTC
GGGCCCGTGTTTTTTCTGGTGGTAGCGGGAAACCTCACTCTTTGTTATTT
TTGCAACCGAGACGGAGAGGTTTGTTTTGCGTCTGTTTGTTGTAATACAC
GCGCGAGATTAACCCTCCGGGGTGTATAGTGTATGCACCGGTAGAAACAG
GTGTGAGGCGCTTGACTTAACTCCGTTCCTGCGTGTCCCGCCCCGTGCTC
ACGCCTGACTCGCACAAGGTTTGAGTCCTATGCAAACAAGCTATACTACT
CGCTGTGTGACAATCTGCGTGCTACTGCTGTAGGCAGCGTACATTTCACT
TGGTTTCTTCTCCACTCCATCGCGAACACCCGTTGCTGTTTTCTCGAGCA
CATGCATGGCGTACTGCTGTTAGACACGTGAGACACGCCGCCGCCGGGTT
GGTGCGACTTTACAGGCACAGAAGGTAGAGGGCAGAAGGCAAGGAAAGGA
AAAGAGGGATTTTCCTCCCCCGATCTCGTAACTACTGCGTTGCTTGCAAG
TCACAACTGCGTAGGCTTGCGCGGATAATAATCCTACACCCACCACACCG
GAAAATTCGAGGGAATCGAGGGAATCGGCTTTTAGAGTTTGGGCGCTAGA
TAGATAGATAGATCTACACGGCACAGCATCTTGGTGCCCGATTTCCGTTT
TTTTTTTTTCTTAAGGATAACCACACGTTGACCAGCTTTGAAACCTCAGT
TATTTCCTCTTTTGATTGAAATTTTTTGTGTTCGCTTTTTTTCAGGTATC
GAGAGGACAAGGTGGGGCTAAGGTGGAGAACCGAAAAAGATGTCGTCAGC
GGAAAGGTTAGCTGAATCCGCACAGCCCGCTTGCAATTTTTCATGGGCAC
ATCGCAGGCACACATCCGCAGATTTTCGTTTTCCGCATAAATAAAATTAA
TACATGCTTGGAGGTATACATCTTAACATCGTTATAGTGTTTATAGTCTC
TATGGAGCGAGGGGCTCCACACTATTTGTCTTTGATTTTTATCGCGTGCT
GACCCTTCGGGTCCATTTTTATTTATACCTTTTTTTTAGGTATAAGTTAT
ATCCTGTGACCACGGGAATTGACCGCATCAAGTGTTGGATTGTACGGACA
TAGGGAGATACTGGGTGGAGAGATCGGAACGGTTTTTAATGTGAAGAAAC
AACAATGCGAACGCGTGTTTAAGCGCGGTGCTGCTGTTCGGGTGCAATGA
AAGGCGTAGGTTTCCGCTATCGGAGTTCGATTTGTCGTGGGACGAAGTGA
ACAAGAACCAGGGTGGGGAACTATAACCTGTTCATGATGGTGTATATATT
TCTTGTGGCGTAGTAACTGGGGCACGGCATGAAACGGTCCAACCGAGAGG
GGCACGTACCGTTTGCTTGTACTGTGTACGATATAAATATGTACCATTTG
TTCAGTGATGATGTTTGGAATGGCGGTATATGTAGCCATAGGACACGTTG
GAATCCAACGGGTTGTTGCCATTTAGGCAATGCGATCTCAATTGGCTGTA
TTTCGTGTAACTGAATTTACGCCGCCGCACCCACACAGCACCTGTCCAGG
GAAGTGGTGGATGCTGATTGGTGGAAATATTAAATATTCCGCGGTACTCG
CGGACGCATGCATCGCTGGGAGGCCGTCGGAGTTCGGTTCGCACTCTGTA
CTAACTATGAATGTGGGGCTTGACATGGCGCGACTATCAGGGGCAGTTCG
AGTGCGGAGCGTTGCGATGCCAGGAGAGGAGAGACCTGCACAGCTACGAA
CTGAACTTCAGGTACAAAGAAGCCGGCGACATCAAGAACGAGCTTGTGAA
GGTGAGGCGGGGTAGATAGACAGGCAGGCAGGCAGGCAGGCGGGCGGGCG
GGCGGGCGCTCAAAGCCTGCTTGCTCTGGTTGAAACGCGCTGGGAGGGTG
GGCGTCGTAGGGCGAGGGGTGCTCATGCTCGGGCAAGTAGTGCTTCGGGT
ATTGAAGGCTGTCCGAGCAAAAGGCCAATCGGAGGAAATCAAGAATCAGT
GTTGATCGTTCGTGTATGCCTCCCAGGTTGCTTACCCCAAGCCGTGGTCG
AAAAAGGTTCGGGTCGAAAATGCCCCTAAAAGACGCGGACGAGCTCGGAA
AGGTCAGCTTGGGCGAAAAGAAGCTTTTGCGACAATGCGTGTGCCCCGTA
ACTACCAACGGATCCCTCCTCGCCCTGTCTACCTCGTTTTGAAAGGGGTA
GGAGCTGACAGCCCCTCTGTCGCCGTTTATTTTGAGGGTTGTGCCATTTA
CGCATGTATAACACCCATGCCTTTTTATCTGGTACTAGGGCTAACACAGG
TGTATGCGTGACGTCACAAATCGCGTCACGGTTGCCCCCCCCCCCCGCCT
ACCGCAGGTGCGCGTGTGCCCGCAGTGCGCCCGGAAGTTGTTCCGAAAAA
AGATCGAGGCGCTCAGGCGACAGCAGCAGCAGCAGCAGCAGCAGCAGAAA
CGGCAGCAAGAAGAAGAGGAGCAAGCCGATGGGGCTCGAGGAGGCGGCGA
GGGTATCCGGAAGAGGCAAATCGATGAAAACGGGAAGAGATTATTGCGAG
GAGATTCTGCCCTTGGGGGGGGCACTGAAGAGGGTCGTGAGGGTCACGGG
CTGGTTCGGCAGGCGGTGGCGGCGGCGGCGGCGGCGCCGGGGGCGGCCGG
GAGTGGCGGCACCACCCCGTCAGCAAAGAAGCGCAGCAGGCCGTCGAGAT
GGGGAGACAAAATCGACCCACCCCAAGCAGCAGCAGCAGCAGCAGCAGCA
GCGAAGAGCGAGGGGAGCAGTGGCAGCAGTGGTGCGGTCGGTGCCGAGGC
GTCGAGACAAGCGTGGGCGGGGGAGCTGGAGAGGGACAGGACGGCGGAAG
ACGAGATGGATGACTACCTCTCGTCCCTATTGCTGTGATGAGTTCTGGCG
GCAGTAGCCTTCGCACGTTTTTACTGGAAGAAATCATGTGGGATGAAGTA
TGGCTAATGGGGGGTCGGTTAGGGATAGGGCCAGAGTTACGGAACCCCTG
TCTACCTAGGTGACATAAGATAAGACACCAGTATCGGTCCAGGGGGTGTC
TTATCTTATGTCACCTACGGTAATATTCCCTATTGTAGATAGACAGGGAC
TGCAGGAATTCTTCGCTAAGGCAGTCCTCTGGCGGGTGGTATGTATGCTG
CGCATTTGGAAGAAGAAAGCAGTTATATTCTAGACACAACAGAGCGGTAT
CTTTCGTTGTAGCCAGTGTCGATATGGATGCAGTACATGGCGTGGTTGAG
CAAGTGGTGGGTGAGCAAAAGGTTCTCCCATCTGTGTGTTTCCAGTCCGC
CGGGACCAGCTACTTGTGCAATGTATCCCGTATGCACCTGCAAGCTTTGG
TGGCGAGGCAAGCGCTTTTCTTGCATCGCAACCCGTTGTCTTGTCAGCCC
GCGAGGCGAGGATAAGAGTGCATGCGGTCGATAGATAAAGCACCAGGACG
TCTTGAAAGCCGGATTTACTGTCTTCGTCACTTGGCACACAAGTTGTGCA
GTCTGCATGCGAGCCTTTGAGCTGTATGTTTCAAGAAGCCCAACAAATGC
CGGTAAGGAGGTTTGTTCTACCTTTTGCGCAGGAGACGCGGTTTCCGAGG
CACGAAGCACACAGACAGACGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig129:9229..16150+

>mRNA_L-elsbetiae_contig129.2305.1 ID=mRNA_L-elsbetiae_contig129.2305.1|Name=mRNA_L-elsbetiae_contig129.2305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2358bp|location=Sequence derived from alignment at L-elsbetiae_contig129:9229..16150+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTCGACGAAGCGAAGAGTATGCTCGCCTCAACGCCGGAGGAGGCTA
CACACAAGCCCTCACGGTCGGCAGGGGATTTTCAGGCGCAGAAAGAAGGG
CCGTGAAGCAAGGTGGCAGCAGGAGTTCGCAGCCTGGCGGTGAAAAGGGT
AGCGGCAGCAGCGCCGGGGGCACGATGAATGCCTACGCCCGACACCAGGA
GCTCATCCGAAATTACCACAGATGTCTCGACGAAGCGAAGAGTATGCTCG
CCTCAACGCCGGAGGAGGCTACACACAAGCCCTCACGGTCGGCAGGGGAT
TTTCAGGCGCAGAAAGAAGGGCCGTGAAGCAAGGTGGCAGCAGGAGTTCG
CAGCCTGGCGGTGAAAAGGGTAGCGGCAGCAGCGCCGGGGGCACGATGAA
TGCCTACGCCCGACACCAGGAGCTCATCCGAAATTACCACAGGTACCATC
TCGACGCCAAAGTGCCTTCGTCGGGAGCGATAGAAGCCAAGGGCCTTCCC
GGGCAGAAGCGGCTGACTGACGAGGAGGCGTTGCGGCGGCAACACCGGTT
CGTGCGGGACCAAGGGGAAGACACCCGGGCACACCAGGTACCATCTCGAC
GCCAAAGTGCCTTCGTCGGGAGCGATAGAAGCCAAGGGCCTTCCCGGGCA
GAAGCGGCTGACTGACGAGGAGGCGTTGCGGCGGCAACACCGGTTCGTGC
GGGACCAAGGGGAAGACACCCGGGCACACCAGGCAAGAGGGCTCGAAGGG
GCAGAGGCCGACCCCAGCGCTTGGGAGGTGCGCATGGCCTCCAAGTACTA
CAAGCTGCTCTTCAAGGAGTACGCCCTGGCCGACCTCTCACGGCAAGAGG
GCTCGAAGGGGCAGAGGCCGACCCCAGCGCTTGGGAGGTGCGCATGGCCT
CCAAGTACTACAAGCTGCTCTTCAAGGAGTACGCCCTGGCCGACCTCTCA
CGGTATCGAGAGGACAAGGTGGGGCTAAGGTGGAGAACCGAAAAAGATGT
CGTCAGCGGAAAGGTATCGAGAGGACAAGGTGGGGCTAAGGTGGAGAACC
GAAAAAGATGTCGTCAGCGGAAAGGGGCAGTTCGAGTGCGGAGCGTTGCG
ATGCCAGGAGAGGAGAGACCTGCACAGCTACGAACTGAACTTCAGGTACA
AAGAAGCCGGCGACATCAAGAACGAGCTTGTGAAGGGGCAGTTCGAGTGC
GGAGCGTTGCGATGCCAGGAGAGGAGAGACCTGCACAGCTACGAACTGAA
CTTCAGGTACAAAGAAGCCGGCGACATCAAGAACGAGCTTGTGAAGGTGC
GCGTGTGCCCGCAGTGCGCCCGGAAGTTGTTCCGAAAAAAGATCGAGGCG
CTCAGGCGACAGCAGCAGCAGCAGCAGCAGCAGCAGAAACGGCAGCAAGA
AGAAGAGGAGCAAGCCGATGGGGCTCGAGGAGGCGGCGAGGGTATCCGGA
AGAGGCAAATCGATGAAAACGGGAAGAGATTATTGCGAGGAGATTCTGCC
CTTGGGGGGGGCACTGAAGAGGGTCGTGAGGGTCACGGGCTGGTTCGGCA
GGCGGTGGCGGCGGCGGCGGCGGCGCCGGGGGCGGCCGGGAGTGGCGGCA
CCACCCCGTCAGCAAAGAAGCGCAGCAGGCCGTCGAGATGGGGAGACAAA
ATCGACCCACCCCAAGCAGCAGCAGCAGCAGCAGCAGCAGCGAAGAGCGA
GGGGAGCAGTGGCAGCAGTGGTGCGGTCGGTGCCGAGGCGTCGAGACAAG
CGTGGGCGGGGGAGCTGGAGAGGGACAGGACGGCGGAAGACGAGATGGAT
GACTACCTCTCGTCCCTATTGCTGTGAGTGCGCGTGTGCCCGCAGTGCGC
CCGGAAGTTGTTCCGAAAAAAGATCGAGGCGCTCAGGCGACAGCAGCAGC
AGCAGCAGCAGCAGCAGAAACGGCAGCAAGAAGAAGAGGAGCAAGCCGAT
GGGGCTCGAGGAGGCGGCGAGGGTATCCGGAAGAGGCAAATCGATGAAAA
CGGGAAGAGATTATTGCGAGGAGATTCTGCCCTTGGGGGGGGCACTGAAG
AGGGTCGTGAGGGTCACGGGCTGGTTCGGCAGGCGGTGGCGGCGGCGGCG
GCGGCGCCGGGGGCGGCCGGGAGTGGCGGCACCACCCCGTCAGCAAAGAA
GCGCAGCAGGCCGTCGAGATGGGGAGACAAAATCGACCCACCCCAAGCAG
CAGCAGCAGCAGCAGCAGCAGCGAAGAGCGAGGGGAGCAGTGGCAGCAGT
GGTGCGGTCGGTGCCGAGGCGTCGAGACAAGCGTGGGCGGGGGAGCTGGA
GAGGGACAGGACGGCGGAAGACGAGATGGATGACTACCTCTCGTCCCTAT
TGCTGTGA
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