mRNA_L-elsbetiae_contig12878.2291.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 6.450e-14 Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 52 PPHPGTTTSRGGLSIAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTRAAALTKARRKDAKAKGLKYGTALEVVV 360 PP P TSR +APS E LI+ +A++AAK EAEA+G +RPR PSRRALEASG L Q + REK+ Q R + + +RK+++ GLK G LE V Sbjct: 364 PPQP---TSRPSDGMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 7.330e-14 Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 52 PPHPGTTTSRGGLSIAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTRAAALTKARRKDAKAKGLKYGTALEVVV 360 PP P TSR +APS E LI+ +A++AAK EAEA+G +RPR PSRRALEASG L Q + REK+ Q R + + +RK+++ GLK G LE V Sbjct: 418 PPQP---TSRPSDGMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 517
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 1.610e-13 Identity = 50/103 (48.54%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 52 PPHPGTTTSRGGLSIAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTRAAALTKARRKDAKAKGLKYGTALEVVV 360 PP P TSR +APS E LI+ +A++AAK EAEA+GG +R R PSRRALEASG L Q + REK+ Q R + +RK ++ GLK G LE V Sbjct: 264 PPQP---TSRPSEGMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 1.420e-12 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 49 LPPHPGTTTSRGGLSIAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTRAAALTKARRKDAKAKGLKYGTALEVVV 360 LPP P S G ++PS E LI+ +A++AAK+EAEA+GG +R R PSRRALEASG L Q + REK Q R + +RK ++ GL G LE V Sbjct: 363 LPPQPTNRPSEG---MSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 4.200e-12 Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 25 SPRPLRSCLPPHPGTTTSRGGLSIAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTRAAALTKARRKDAKAKGLKYGTALEVVV 360 SP P PP +APS EFL++ +A++ AK EAEA+G +RPR PSRRALEA+G L Q + REK+ R A + +RK +A GLK G LE+ V Sbjct: 198 SPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFV 309
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 7.320e-12 Identity = 50/120 (41.67%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 7 RSGLSRSPRPLRSCLPPHPGTTTSR--GGLSIAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTRAAALTKARRKDAKAKGLKYGTALEVVV 360 ++ S P P + P P ++ +R +APS EFL++ +A++AAK EAEA+G +RPR PSRRALEA+G L Q + REK+ R A + +RK +A GLK G LE+ V Sbjct: 429 KTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFV 548
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 3.510e-11 Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 94 IAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTRAAALTKARRKDAKAKGLKYGTALEVVV 360 +APS EF ++ +A++ AK+EA A+GG +RPR PSRRALEASG L Q + RE++ + R A + +R+ KA GLK G LE V Sbjct: 179 MAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFV 267
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 4.610e-11 Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 25 SPRPLRSCLPPHPGTTTSRGGLSIAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTRAAALTKARRKDAKAKGLKYGTALEVVV 360 SP P PP +APS EFL++ +A++ AK EAEA+G +RPR PSRRALEA+G L Q + REK+ R A + +RK +A GLK G LE+ V Sbjct: 436 SPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFV 547
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 9.830e-11 Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 94 IAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTRAAALTKARRKDAKAKGLKYGTALEVVV 360 +APS EF ++ +A++AAK+EA +GG +RPR PSRRALEASG L Q + RE++ + R A + +R+ KA G K G LE V Sbjct: 129 MAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFV 217
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Match: A0A6H5JZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL0_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 7.130e-10 Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 52 PPHPGTTTSRGGLSIAPSDEFLIVARAKDAAKREAEAAGGDKRPRLPSRRALEASGVLTDAVLQRVIREKEENQTR 279 PP P TSR +APS E LI+ +A++AAK EAEA+GG +RPR PSRRALEASG L Q REK+ Q R Sbjct: 100 PPQP---TSRPSEGMAPSVEMLILRQAREAAKTEAEASGGGRRPRAPSRRALEASGRLRGDGAQWKTREKKPGQAR 172 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12878.2291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12878.2291.1 >prot_L-elsbetiae_contig12878.2291.1 ID=prot_L-elsbetiae_contig12878.2291.1|Name=mRNA_L-elsbetiae_contig12878.2291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp NRRSGLSRSPRPLRSCLPPHPGTTTSRGGLSIAPSDEFLIVARAKDAAKRback to top mRNA from alignment at L-elsbetiae_contig12878:4098..4638+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12878.2291.1 ID=mRNA_L-elsbetiae_contig12878.2291.1|Name=mRNA_L-elsbetiae_contig12878.2291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=541bp|location=Sequence derived from alignment at L-elsbetiae_contig12878:4098..4638+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12878:4098..4638+ >mRNA_L-elsbetiae_contig12878.2291.1 ID=mRNA_L-elsbetiae_contig12878.2291.1|Name=mRNA_L-elsbetiae_contig12878.2291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=732bp|location=Sequence derived from alignment at L-elsbetiae_contig12878:4098..4638+ (Laminarionema elsbetiae ELsaHSoW15)back to top |