mRNA_L-elsbetiae_contig128.2241.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: A0A6H5KCE4_9PHAE (ABM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCE4_9PHAE) HSP 1 Score: 240 bits (613), Expect = 6.300e-77 Identity = 132/161 (81.99%), Postives = 140/161 (86.96%), Query Frame = 2 Query: 2 RFKVKLGCEDEFETMWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEE-GEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSHGXXXXXXXXXXXXXXGDGKPGMVVAAGGMGKIRELIVEPPTPLLYNAVIIEPVPPEHQGGLWDFENEPSYFDGDM 481 RFKVKLGCE+EFETMWR RESKL SFSGFEQFMLL++DTREAEKKEEE G AR GYTEFVSHT WAHQMDFEEWKRSQAFKKSHG XXXXXXXXXX G VVAAGGMGK+R+LI+EPP P LYNA I+EPVPPEHQGGLWDFE+EPSYFDGDM Sbjct: 80 RFKVKLGCEEEFETMWRERESKLASFSGFEQFMLLRVDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSHGGXXXXXXXXXXELGG-----FVVAAGGMGKMRDLIMEPPVPSLYNAAIVEPVPPEHQGGLWDFEDEPSYFDGDM 235
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: D8LB88_ECTSI (Antibiotic biosynthesis monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB88_ECTSI) HSP 1 Score: 208 bits (529), Expect = 1.670e-65 Identity = 111/152 (73.03%), Postives = 115/152 (75.66%), Query Frame = 2 Query: 44 MWRNRESKLDSFSGFEQFMLLKLDTREAEK-KEEEGEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSHGXXXXXXXXXXXXXXGDGKP-----GMVVAAGGMGKIRELIVEPPTPLLYNAVIIEPVPPEHQGGLWDFENEPSYFDGDM 481 MWR RESKL SFSGFEQFMLL+LDTRE EK +EEEG AR GYTEFVSHT WAHQMDFEEWK SQAFKK H G+GK G VV AGGMGKIRELIVEPP P LYNA IIEPVPPEHQGGLWDFE+EPSYFDGDM Sbjct: 1 MWRERESKLASFSGFEQFMLLRLDTREVEKNEEEEGAPAARPGYTEFVSHTSWAHQMDFEEWKNSQAFKKGHSGGGG----------GEGKAKGESGGFVVVAGGMGKIRELIVEPPVPSLYNAPIIEPVPPEHQGGLWDFEDEPSYFDGDM 142
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: A0A835YW22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW22_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.960e-17 Identity = 54/162 (33.33%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 5 FKVKLGCEDEFETMWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEEGEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSHGXXXXXXXXXXXXXXGDGKPGMVVAAGGMGKIRELIVEPPTPLLYNAVIIEPVPPEHQ---GGLWDFENEPSYFDGDM 481 FKVK+G E++FE WR R+ L+ SGF FML++ + E +E G +AR G+ F + TVW H+MDF++W+ + D K G + + + +++ PP LY V+ P E GGL+D+E P YFDGD+ Sbjct: 9 FKVKIGNEEKFEEFWRERKLSLEGQSGFSSFMLVRGEDDFDETQE--GGRLARDGFATFETTTVWLHRMDFDDWRSKKDSP-------------------DKKRGFLAMSA--EDVAAMLLAPPEQRLYETVVTLPKAAEENVRLGGLFDWEENPDYFDGDL 147
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: A0A2A5CNF7_9BACT (Antibiotic biosynthesis monooxygenase n=2 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2A5CNF7_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 1.490e-16 Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 2 RFKVKLGCEDEFETMWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEEGEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSH 256 RFK+ LG ED+FE MWRNRE+ L+ GF QF L+K T + GYT + SH+VW + DFE WK+S+AF+ +H Sbjct: 3 RFKISLGREDDFEEMWRNRETHLEGVKGFRQFNLIKGSTND--------------GYTLYASHSVWESKNDFENWKKSEAFRAAH 73
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: A0A1M3MJ44_9HYPH (Antibiotic biosynthesis monooxygenase n=1 Tax=Rhizobiales bacterium 63-22 TaxID=1895812 RepID=A0A1M3MJ44_9HYPH) HSP 1 Score: 79.7 bits (195), Expect = 1.010e-15 Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 2 RFKVKLGCEDEFETMWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEEGEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSH 256 RF+V++G E +FET+WRNR+SKL+ GFE F LL+ T EAE GYT + SHTVW + DF W RS+ F+++H Sbjct: 7 RFRVRVGSEADFETVWRNRDSKLNELPGFESFHLLRGATNEAE------------GYTLYASHTVWKSREDFLFWTRSEQFREAH 79
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: A0A2W4AY73_9HYPH (Antibiotic biosynthesis monooxygenase n=7 Tax=Rhizobium TaxID=379 RepID=A0A2W4AY73_9HYPH) HSP 1 Score: 79.3 bits (194), Expect = 1.410e-15 Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 2 RFKVKLGCEDEFETMWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEEGEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSH 256 RFKV +G E EFE++WRNR+S L GF +F LL+ T E E GYT F SHT WA++ DF W +S++F+KSH Sbjct: 7 RFKVAVGSEAEFESIWRNRDSSLPEVPGFVEFRLLRSKTNEDE------------GYTLFSSHTTWANEADFINWTKSESFRKSH 79
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: A0A2W4CML5_9HYPH (Antibiotic biosynthesis monooxygenase n=1 Tax=Rhizobium tubonense TaxID=484088 RepID=A0A2W4CML5_9HYPH) HSP 1 Score: 78.2 bits (191), Expect = 3.890e-15 Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 2 RFKVKLGCEDEFETMWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEEGEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSH 256 RFKV +G E+EFE++WRNR+S+L GF +F LL+ T E E GYT F SHT+W + DF+ W RS+ F+ +H Sbjct: 7 RFKVAVGSENEFESIWRNRDSRLPEVPGFVEFRLLRSKTNEEE------------GYTLFSSHTIWRSEDDFQNWTRSENFRSAH 79
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: A0A6I0DQ36_BRUAN (Antibiotic biosynthesis monooxygenase n=30 Tax=Brucellaceae TaxID=118882 RepID=A0A6I0DQ36_BRUAN) HSP 1 Score: 77.0 bits (188), Expect = 1.070e-14 Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 2 RFKVKLGCEDEFETMWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEEGEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSH 256 RFKV++G E +FET+W+NR+SKL GFE F LL+ T E E GYT + SHTVW ++ DF W +S+ F+ +H Sbjct: 7 RFKVRVGSEADFETVWKNRDSKLSELPGFESFHLLRGATNEEE------------GYTLYASHTVWRNRDDFVAWTKSEQFRDAH 79
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: A0A432VBR4_9HYPH (Antibiotic biosynthesis monooxygenase n=1 Tax=Pseudaminobacter arsenicus TaxID=1851146 RepID=A0A432VBR4_9HYPH) HSP 1 Score: 77.0 bits (188), Expect = 1.070e-14 Identity = 40/85 (47.06%), Postives = 48/85 (56.47%), Query Frame = 2 Query: 2 RFKVKLGCEDEFETMWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEEGEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSH 256 RFKVK G E++FE +W+NR S L GF QF LL+ E E GYT F SHTVW + DFE W +SQ F+ SH Sbjct: 7 RFKVKPGMEEDFENVWKNRNSTLSEMKGFRQFHLLRSTFNEEE------------GYTLFASHTVWDSREDFEAWTKSQNFRDSH 79
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Match: A0A1G4QMT1_9HYPH (Heme-degrading monooxygenase HmoA n=6 Tax=Xanthobacteraceae TaxID=335928 RepID=A0A1G4QMT1_9HYPH) HSP 1 Score: 77.0 bits (188), Expect = 1.220e-14 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 2 RFKVKLGCEDEFETMWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEEGEFVARTGYTEFVSHTVWAHQMDFEEWKRSQAFKKSHG 259 RFKVKLG E +FET+WR R+S L + GF+ F LL+ T++ +T + SH+VWA + DFE W RS+AF+K+HG Sbjct: 7 RFKVKLGSEADFETVWRERDSHLRTVPGFKTFNLLRGPTKD--------------DHTLYASHSVWASRADFEAWTRSEAFRKAHG 78 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig128.2241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig128.2241.1 >prot_L-elsbetiae_contig128.2241.1 ID=prot_L-elsbetiae_contig128.2241.1|Name=mRNA_L-elsbetiae_contig128.2241.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp MWRNRESKLDSFSGFEQFMLLKLDTREAEKKEEEGEFVARTGYTEFVSHTback to top mRNA from alignment at L-elsbetiae_contig128:1394..2841+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig128.2241.1 ID=mRNA_L-elsbetiae_contig128.2241.1|Name=mRNA_L-elsbetiae_contig128.2241.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1448bp|location=Sequence derived from alignment at L-elsbetiae_contig128:1394..2841+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig128:1394..2841+ >mRNA_L-elsbetiae_contig128.2241.1 ID=mRNA_L-elsbetiae_contig128.2241.1|Name=mRNA_L-elsbetiae_contig128.2241.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig128:1394..2841+ (Laminarionema elsbetiae ELsaHSoW15)back to top |