mRNA_L-elsbetiae_contig12651.2142.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12651.2142.1
Unique NamemRNA_L-elsbetiae_contig12651.2142.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: D7G418_ECTSI (Ribonucleoside-diphosphate reductase small chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G418_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 1.630e-153
Identity = 217/228 (95.18%), Postives = 224/228 (98.25%), Query Frame = 1
Query:    1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKD+QERD LFNAYN+IPCVKQKADWAMRWIGSDATFAERLVAFAAVEG+FFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLF SLENKP+R+TVMAIV+EAVEVEKSFICGALPCSLIGMNA VM+QYIEFVADRLLGSLGY K
Sbjct:  222 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDNLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVREAVEVEKSFICGALPCSLIGMNAGVMSQYIEFVADRLLGSLGYGK 449          
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A835YXN6_9STRA (Ferritin-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN6_9STRA)

HSP 1 Score: 357 bits (917), Expect = 4.760e-121
Identity = 174/227 (76.65%), Postives = 193/227 (85.02%), Query Frame = 1
Query:    4 DSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            D+ DWE L+  E+HFISMVLAFFA+SDGIVMENLV RF  EVQ PEARCFYGFQIAMESIHQEMYA LLD YIKDR E+D LFNA+  I C+K+KADWA RWIGS A+FAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC+L+  LE   +R  ++ I+ EAV+VEK FIC ALP SLIGMNA  M  YIEFVADR+L SLGY+K
Sbjct:   95 DAADWEKLSRQEKHFISMVLAFFASSDGIVMENLVHRFCAEVQAPEARCFYGFQIAMESIHQEMYAALLDAYIKDRNEKDTLFNAHLKIHCIKRKADWAERWIGSTASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACELYRMLERPLSRARILHIITEAVDVEKDFICDALPVSLIGMNAATMRTYIEFVADRMLQSLGYDK 321          
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A7S2WPD1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPD1_9STRA)

HSP 1 Score: 359 bits (922), Expect = 9.190e-121
Identity = 167/227 (73.57%), Postives = 201/227 (88.55%), Query Frame = 1
Query:    4 DSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            D RDWE+L+ +EQHF+ MVLAFFA+SDG+VMENL  RF +EVQLPEARCFYGFQIAME++HQEMY+LLLDTYI+D  ER QLF+AY ++P VK KADWA+RWIGSDA+FA+RLVAFAAVEGIFFSGSFCAI+WLKKRGLMPGLTFSNE+ISRDEGLHCDFAC+++  ++++  R+++  I+ EAVEVEK FIC ALP SLIGMN+ +M+QYIEF ADRLL +LG EK
Sbjct:  166 DRRDWESLSESEQHFVKMVLAFFASSDGVVMENLAHRFCREVQLPEARCFYGFQIAMEAVHQEMYSLLLDTYIRDPDERAQLFHAYQHVPAVKAKADWALRWIGSDASFAKRLVAFAAVEGIFFSGSFCAIYWLKKRGLMPGLTFSNELISRDEGLHCDFACEMYRMIQHRLDRESITQIITEAVEVEKGFICDALPVSLIGMNSDLMSQYIEFCADRLLTALGEEK 392          
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A067FZP6_CITSI (Uncharacterized protein n=5 Tax=Pentapetalae TaxID=1437201 RepID=A0A067FZP6_CITSI)

HSP 1 Score: 340 bits (872), Expect = 6.760e-115
Identity = 159/228 (69.74%), Postives = 191/228 (83.77%), Query Frame = 1
Query:    1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            QD R WEALT +E+HF++ VLAFFAASDGIV+ENL  RF  EVQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIKD  E+++LF+A   +PCV +KA WA+ WI    TFAERL+AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+  L  K + + V A+VKEAVE+E+ F+C ALPC+L+GMN ++M+QYIEFVADRLLG+LGY K
Sbjct:   48 QDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGK 275          
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A7J6X3S5_THATH (Ribonucleoside-diphosphate reductase small chain n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A0A7J6X3S5_THATH)

HSP 1 Score: 340 bits (872), Expect = 1.160e-114
Identity = 157/228 (68.86%), Postives = 194/228 (85.09%), Query Frame = 1
Query:    1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            QD R WE LT +E+HFI+ VLAFFAASDGIV+ENL  RF +EVQ+ EAR FYGFQIA+E+IH EMY+LLL++YIKD  E+++LFNA   IPCVK+KA+WA+RWI    +FAER++AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+  L+NK + + V  IV +AVE+E+ F+C A+PC+L+GMN  +M+QYIEFVADRL+G+LGY+K
Sbjct:   48 QDQRQWETLTKDEKHFITHVLAFFAASDGIVLENLGVRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLESYIKDSNEKNRLFNAIETIPCVKKKAEWALRWIDGSESFAERVIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLKNKLSEERVRGIVSDAVEIEREFVCEAIPCALVGMNCDLMSQYIEFVADRLIGALGYDK 275          
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A1U7Z6U0_NELNU (ribonucleoside-diphosphate reductase small chain-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7Z6U0_NELNU)

HSP 1 Score: 339 bits (870), Expect = 1.360e-114
Identity = 161/228 (70.61%), Postives = 192/228 (84.21%), Query Frame = 1
Query:    1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            QD RDWE LT  E+HFI++VLAFFAASDGIV+ENL  RF +EVQ  EAR FYGFQIA+E+IH EMY+LLL++YIKD  E+++LF+A   IPCV++KA W +RWI S  +FAERLVAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+  L+ K + + V  IV EAVE+E+ F+C ALPC+L+GMNA +M+QYIEFVADRLLG+LGY K
Sbjct:   48 QDLRDWENLTHGEKHFITLVLAFFAASDGIVIENLASRFMKEVQNSEARAFYGFQIAIENIHSEMYSLLLESYIKDAAEKNRLFHAIETIPCVEKKAQWTLRWITSSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYEFLKQKLSEERVKGIVAEAVEIEREFVCDALPCALVGMNADLMSQYIEFVADRLLGALGYGK 275          
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A067DYP7_CITSI (Uncharacterized protein n=6 Tax=rosids TaxID=71275 RepID=A0A067DYP7_CITSI)

HSP 1 Score: 339 bits (870), Expect = 1.360e-114
Identity = 159/228 (69.74%), Postives = 190/228 (83.33%), Query Frame = 1
Query:    1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            QD R WE+LT +E+HFI+ VLAFFAASDGIV+ENL  RF +EVQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIK+  E+ +LF A+  +PCV +KADWA+ WI    TFAERL+AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+  L NK + + V  IVKEAVE+E+ F+C ALPC+L+GMN  +M+QYIEFVADRLLG+LG  K
Sbjct:   48 QDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGK 275          
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A2P6QXD4_ROSCH (Putative oxidoreductase n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6QXD4_ROSCH)

HSP 1 Score: 340 bits (871), Expect = 1.480e-114
Identity = 161/228 (70.61%), Postives = 192/228 (84.21%), Query Frame = 1
Query:    1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            QD + WEALT +E+HFIS VLAFFAASDGIV+ENL  RF  +VQ+PEAR FYGFQ+AME+IH EMY+LLL+TYIKD +E+ +LFNA  NIPCV +KA WA+ WI S  +FAERLVAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+  L+ +   + V  I++EAVE+E  F+C ALPC+LIGMN+ +M+QYI+FVADRLL +LGYEK
Sbjct:   61 QDVQQWEALTDSEKHFISHVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQLAMENIHSEMYSLLLETYIKDPKEKHRLFNAIENIPCVSRKAKWALHWINSSNSFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLNPEKVHGIIREAVEIETEFVCDALPCALIGMNSALMSQYIKFVADRLLVALGYEK 288          
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A0X3NX54_SCHSO (Ribonucleoside-diphosphate reductase subunit M2 n=2 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0X3NX54_SCHSO)

HSP 1 Score: 339 bits (869), Expect = 3.770e-114
Identity = 165/229 (72.05%), Postives = 193/229 (84.28%), Query Frame = 1
Query:    1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIG-SDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            +D  DWE+L   E+HFIS VLAFFAASDGIV ENLVERFSQEVQ+PEARCFYGFQIA+E+IH EMY+LL+DTYIKD  ERD LFNA   +PCVK+KADWA++WIG S +TF ERLVAFAAVEG+FFSGSF +IFWLKKRGLMPGLTFSNE+ISRDEGLH DFAC LF  + NKP+++ V  I++EAV++E  F+  ALP  LIGMN ++MAQYI FVADRLL  LG+EK
Sbjct:   68 KDLGDWESLKDGEKHFISYVLAFFAASDGIVNENLVERFSQEVQIPEARCFYGFQIAIENIHSEMYSLLIDTYIKDPIERDFLFNAVQTLPCVKKKADWALKWIGDSKSTFPERLVAFAAVEGVFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFKHIRNKPSKERVEKIMREAVDIEVEFLTDALPVDLIGMNCRLMAQYIRFVADRLLTELGFEK 296          
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A3R7GRY8_CLOSI (Ribonucleoside-diphosphate reductase subunit M2 n=3 Tax=Opisthorchiidae TaxID=6196 RepID=A0A3R7GRY8_CLOSI)

HSP 1 Score: 339 bits (870), Expect = 4.660e-114
Identity = 164/229 (71.62%), Postives = 193/229 (84.28%), Query Frame = 1
Query:    1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIG-SDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684
            +D  DW +L   E+HFIS VLAFFAASDGIV+ENLVERFSQEVQ+PE RCFYG QIA+E+IH EMY+LL+DTYIKD  ERD LFNA +N+ CV QKA WA+ WIG + +TFAER+VAFAAVEGIFFSGSF AIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+  +  KP +D V+AI+KEAVE+E+ F+  ALP SLIGMN ++M +YIEF+ADRLL  LG+EK
Sbjct:   85 KDFSDWNSLKVGERHFISYVLAFFAASDGIVLENLVERFSQEVQVPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDPTERDFLFNAISNLECVAQKAQWALNWIGDTHSTFAERIVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYKYIVQKPAKDRVLAIIKEAVEIEQKFLSDALPVSLIGMNCKLMCRYIEFIADRLLVELGHEK 313          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G418_ECTSI1.630e-15395.18Ribonucleoside-diphosphate reductase small chain n... [more]
A0A835YXN6_9STRA4.760e-12176.65Ferritin-like superfamily n=1 Tax=Tribonema minus ... [more]
A0A7S2WPD1_9STRA9.190e-12173.57Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A067FZP6_CITSI6.760e-11569.74Uncharacterized protein n=5 Tax=Pentapetalae TaxID... [more]
A0A7J6X3S5_THATH1.160e-11468.86Ribonucleoside-diphosphate reductase small chain n... [more]
A0A1U7Z6U0_NELNU1.360e-11470.61ribonucleoside-diphosphate reductase small chain-l... [more]
A0A067DYP7_CITSI1.360e-11469.74Uncharacterized protein n=6 Tax=rosids TaxID=71275... [more]
A0A2P6QXD4_ROSCH1.480e-11470.61Putative oxidoreductase n=2 Tax=Rosoideae TaxID=17... [more]
A0A0X3NX54_SCHSO3.770e-11472.05Ribonucleoside-diphosphate reductase subunit M2 n=... [more]
A0A3R7GRY8_CLOSI4.660e-11471.62Ribonucleoside-diphosphate reductase subunit M2 n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12651contigL-elsbetiae_contig12651:461..4798 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score447.6
Seed ortholog evalue3.5e-123
Seed eggNOG ortholog2880.D7G418
Preferred nameRNR2
KEGG rclassRC00613,RC01003
KEGG koko:K10808
KEGG ReactionR02017,R02019,R02024,R08363,R08364,R11893
KEGG Pathwayko00230,ko00240,ko00480,ko00983,ko01100,ko04115,map00230,map00240,map00480,map00983,map01100,map04115
KEGG ModuleM00053
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004748,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006240,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009148,GO:0009165,GO:0009185,GO:0009186,GO:0009189,GO:0009193,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009215,GO:0009216,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0032991,GO:0034641,GO:0034654,GO:0042278,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046062,GO:0046131,GO:0046385,GO:0046483,GO:0046704,GO:0051063,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0072521,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1902494,GO:1990204
EggNOG free text desc.ribonucleoside-diphosphate reductase activity
EggNOG OGsCOG1678@1,KOG1567@2759
Ec32 ortholog descriptionRibonucleotide reductase
Ec32 orthologEc-19_000440.1
EC1.17.4.1
COG Functional cat.K
BiGG ReactioniMM904.YGR180C,iMM904.YJL026W,iND750.YGR180C,iND750.YJL026W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Exons6
Model size684
Cds size684
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12651.2142.1prot_L-elsbetiae_contig12651.2142.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12651 461..4798 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815455.9952862-CDS-L-elsbetiae_contig12651:460..5591622815455.9952862-CDS-L-elsbetiae_contig12651:460..559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 461..559 -
1691682906.4968598-CDS-L-elsbetiae_contig12651:460..5591691682906.4968598-CDS-L-elsbetiae_contig12651:460..559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 461..559 -
1622815456.006785-CDS-L-elsbetiae_contig12651:1436..16581622815456.006785-CDS-L-elsbetiae_contig12651:1436..1658Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 1437..1658 -
1691682906.5090725-CDS-L-elsbetiae_contig12651:1436..16581691682906.5090725-CDS-L-elsbetiae_contig12651:1436..1658Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 1437..1658 -
1622815456.0156832-CDS-L-elsbetiae_contig12651:2057..21311622815456.0156832-CDS-L-elsbetiae_contig12651:2057..2131Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 2058..2131 -
1691682906.516477-CDS-L-elsbetiae_contig12651:2057..21311691682906.516477-CDS-L-elsbetiae_contig12651:2057..2131Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 2058..2131 -
1622815456.0292232-CDS-L-elsbetiae_contig12651:3244..33391622815456.0292232-CDS-L-elsbetiae_contig12651:3244..3339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 3245..3339 -
1691682906.5240135-CDS-L-elsbetiae_contig12651:3244..33391691682906.5240135-CDS-L-elsbetiae_contig12651:3244..3339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 3245..3339 -
1622815456.0395858-CDS-L-elsbetiae_contig12651:4053..41421622815456.0395858-CDS-L-elsbetiae_contig12651:4053..4142Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 4054..4142 -
1691682906.5317576-CDS-L-elsbetiae_contig12651:4053..41421691682906.5317576-CDS-L-elsbetiae_contig12651:4053..4142Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 4054..4142 -
1622815456.0493908-CDS-L-elsbetiae_contig12651:4693..47981622815456.0493908-CDS-L-elsbetiae_contig12651:4693..4798Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 4694..4798 -
1691682906.5392926-CDS-L-elsbetiae_contig12651:4693..47981691682906.5392926-CDS-L-elsbetiae_contig12651:4693..4798Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12651 4694..4798 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12651.2142.1

>prot_L-elsbetiae_contig12651.2142.1 ID=prot_L-elsbetiae_contig12651.2142.1|Name=mRNA_L-elsbetiae_contig12651.2142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp
QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARC
FYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWA
MRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEM
ISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCS
LIGMNAQVMAQYIEFVADRLLGSLGYEK
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mRNA from alignment at L-elsbetiae_contig12651:461..4798-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12651.2142.1 ID=mRNA_L-elsbetiae_contig12651.2142.1|Name=mRNA_L-elsbetiae_contig12651.2142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4338bp|location=Sequence derived from alignment at L-elsbetiae_contig12651:461..4798- (Laminarionema elsbetiae ELsaHSoW15)
CAGGACTCTCGGGACTGGGAAGCCCTCACGGGGAACGAGCAGCACTTCAT CAGCATGGTCTTGGCCTTCTTCGCCGCCAGCGACGGGATCGTCATGGAGA ACCTTGTGAGTACCGCAGCTGCTGTACATGGGGGGGGGGGGGGGGGGGGT CCTGGATTGATCCGCCCAGAGTCGAGAGGGAGGGAGGGGGTATTTGTACC GTAGCCCCCATTGTATTATTTTTCTTTCTTCGCTACCAGTGACGGGATCG CATGGAGAACTTTGTGAGTACCGTACTGCTGTTCAAGCCCCCCCCCGGAT TGATAGGCCGAGAGCCGATATACTGCTATGTAGCATAACTATACACTCTC TTCGCCGCCAAGGACGGGATCTTGATGACTGCTGTCTGTACCATTTATCG CTAGTCTTGAGCTTCATGGAGCACAGGTCCCCCCTAGGGAGAGAACCTAC GGTGGGCAGCCGTATTTTTAGCCGGCACAGCAGTAAAGTCGGGCGGTGTT GATTTGTCATTCGTTTGCTTGTTCGCTCGTGTGTGTTTGTGCTGTCGATC AGGTGGAGAGAGATTCAGCCAATAAGTGCATTTCGTGTTGGGCGCTTGGT GTTCATAAAGTCATTCGTCCGTCATCCCGTGTTGTGTTTTTTGCGGTGTC GCTCAGGTGGAGAGATTCAGCCAGGAAGTACAGCTTCCCGAGGCGCGTTG CTTCTATGGGTTCCAGATCGCTATGGAATCGATCCACCAGGAGATGTGAG AACCCCCTGCCCAAAATGATCAGCAACTTTTCTTTTTTTCGGTTATCGTG TACCCTTTTTAAGGTAACCTTTTTAGGGTAAATTTTGAGACTCGACCGCG TGAGTGTTGGATAATTTAGTACGCACTCATGGAGGTGTACTGGATAGAGA GATCGGAACGAATTTTAATGCGAAGACAACAACGTCAAAACCCGCGAAAA TGACGAAACCACCCACACGTCAGACTTTTTTTCATCTCGAATGGAATCGA TCGATTCACGGGGCGATGTGAAAAAGAGAGACAGAGACGGCTAGATTTTC TTGCGGGGAGGAAAACTATTTTGGTCTGACGTCCCCGTGATCATTCTGCT AACAGGGCGATTTCGTTGCTCTACGGTCGGCCCATCACCTCTCTCTAATG TATGCTGTACGCAATTTAAGCATACCCGGGACCCCCCTGAGTCATGCCCG GGTCTCTTCTTCGTTGGCGTTCAACGTATACCTACCTACCTTTGAAAAAA AAAAACATTATCTTGATCCCCTTTGCCTGTTTGTCGAGTGTGTTTTCACG TATCCCAACGATGAAACGTATTGTGCTCCTTCGGCGCTGTTTTGCAGGTC GCTCTCGGCCCGCTCATGTCTGGTCGCTTCATTGGCTACCGTTTCTTATA GACCCGTGCTTGGCTTACGTTTGGGCTTTTATGTCTTGTCTGAACCTGCG TGCGAGCAGGTACGCCCTGCTGCTGGACACGTACATCAAGGACCGGCAGG AACGAGATCAGCTGTTCAACGCCTACAATAACATCCCTTGCGTCAAGCAG AAAGGTGACCGAGCGAGCCGAGCGAGGGTTGGATGGTGTATCTACGGCGC GCGACCGCGTTCCTTTTGCTCTCCCCGGGCGACGTTATTTCCGTTGCAAG CCGCCGCTCTTGTGTGGTGTGGTACAGTAGCAGCAGCGCCCCTTCACGAA AATACACCCCTTTCCTCTCCTTGTACTGCTGTTAGCGGCGGCGTGCAAGT TCACGGAAGTGGGCACAATAGCAGCGCAGAGATAACCCGTGTGTGGTGTC GGCATGGACTGCCTTCGCGAGAAAAAACGGGGAACTAGAGTAGTAGGGGT TCCGTAACCCTAGCCCTAATCCTAACCCTAACCACCGACCCCCCAAACAT TCCCCGATTCCATACTTTGTCCCATATGTTTCGCTGAACAAAAACCTGCG TAGGCTACTCGTCGGCATGTGCACATGCACGAGTTCAAGAAACAGACGGT GGACCTTTTTCACGGTGTGCCCCCTATTCGATGATACGTGTACCGCAGCA CCCGACTTTTACGGTGCGGCGTGGTGGCCACAATCTCTTTATACTGTAGC CTAGCGAGGAAGTCGCTTCGCTTCTGCTGTGCTTTGCCGTGCCCTACCCG TCGATGCTGTGTGCCCTCTTCGGCCTGTTTTGGGGGACGGCTTTTTTTGC TTTTTTTCTTATTTATTTATTTATTTATTTATTGATTTATTTATTTATTT TTCTTCACATTTATTTCCAGTGCTCGATGGGCTCCCTGTCACGAGGACAT CTTGCCAGAGCATCGAACCGCGGTCGCACAGAAGGGTTTCTTTCCCCATG GCCCCTACTCCCCCCGTCTGCGGTGCTTGTCTGCTATTTTTTTCGCGAGA AGGTTTCAGCCGCCCCTTTCCCTCGTCGACGGTGAGGTCGAATTTTGAAG TTTGTGTACACACGCTAAGCGCTACCCACTTGTCGGTATTTTAATTTTAA ATATCCTTGTGATTGCATCATATACATATGGTATATTTTTTTCTCATGCA AGCTCCTTTTTGCGTGCGTGATGTCGCTGTTTGCGATCTCGCTCTCTCTC TCTCTCGCTCTCTCTTTCACTCTCCTTCGGGATGATTTTTCGGTCTCCGT GTCCATGGCCTATTCAGCCGATTGGGCGATGAGGTGGATCGGCAGCGACG CCACTTTCGCTGAGAGACTTGTCGCCTTCGCCGCTGTCGAGGTGAGATGA GATGAGATGAGATGAGAGCGGAAGAAACAAGCTCCTTCTGAGCGTTTTCT GTCGGCGTTTTTGTTGTCTGCGGAAGAGGCTTGCCGTGCTTCCGTTACTT AACCCTGGCGATGGGTGTCGGGGCGGCGGGGGCACCGTCGGCGGTCTTGT TTGCTAGTGTTGCCGTGGTTGTGGCCTTGTTGTCTGTGCGGCGCTGGGAA GGGAAGCCGAAACAAAGTACTTTGAAGTATAGTATTGCTCCCGCGTGAGG GTGAGCAGCTCCTTAGTATAAACTAGCAGCACCTTTGTACAGAGCAAGGT AAAAGCTGTAAATTTGTAGCACACGTTCGTTCGATAATAATATGCCAAGC AACGCCGCTTCCTCCCCTCTCCTCTCGGGGGCTCCGCCAGGGCATTTTTT TCTCGGGGAGCTTCTGTGCAATCTTTTGGCTCAAGAAGCGCGGTCTCATG CCGGGCCTGACGTTCAGCAACGAGATGATCAGCCGCGACGAGGGTCTGCA CTGCGACTTCGCCTGCCAGCTGTTCCACTCCCTGGAGAACAAGCCCACCC GGGACACGGTCATGGCCATTGTCAAGGAGGCCGTCGAGGTCGAGAAGAGC TTCATCTGCGGGGTGAGATTCACGGTGGCCATGTGTGTGTGTGTGTGAGT GTGAGCGTGTTTTCTTTGTTGGCGACGACCGCGCCAACCGGTCGACCAAG GAAAATACGTCAGCCTTTGTGCGGGCAAAATAGCAACACTTTCCTATTTA AGTGATGGGACCCCTCGACTATTTTGTTTTGTATTTCTGTGTGGGAGAAA GAGAGAGATAGTGCAGAGGAGAAGCAGCGCATGTATGTACAGGCAAAATA AGAAAGAGATGGATTCGCGTGCTGTGGGGGGGGGGGGAGAAGAGAAGCAA CATGTATTCATTCGTGCGCGTATTTATTTTTGTAGGGATAAGACGGAGTG TTCAAATTCTCACTAGTGCACCCACCCGCTTGTTCGATATTTGACCACGC GCATCGCAGTTTTGTTTTAGCCCGGAGTTGGGCACGAAGGAGGAGAGGGA CGTGCGCAATTTCTTCCGTCGCGAGAGCGCTGTTACACAGAAGTTCTAGC ATATGCAATAGCCGTTGTAGGTCTTAAAGAGGTAAAAGCGTCTGTTGGAC TACTTTGCCGAGCAACTTCTACAGCCGCGTTGTCCTCCCACATGCTCAAT AATTTTGTCCCAACATGATAAGTCCACAACAGCCGCCACCAGAGAACAGC CCCTGGGTGTTGCAGGGTTCCCCTTATCCCGCCGCGGACTCTTCTTCACG GCGAGAAATACATGCATACATCCAACACGCCACCACCAAGGGTAGATTCT ACTCTTTGGCAGCGTTCTTCGTTTTTCTTGGTGACCGCGGCTAAATTTAT TATCGTGTGACGACGACCACCCACCCAAATATCGCGCACACCACCGCATA TGGACTCAAAGCGATATCACTGTGCACCAACCACCGCAGGCCCTTCCCTG CAGCCTGATCGGGATGAACGCCCAAGTGATGGCGCAGTACATCGAGTTCG TGGCTGACCGACTGCTAGGATCGCTCGGCTATGAAAAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12651:461..4798-

>mRNA_L-elsbetiae_contig12651.2142.1 ID=mRNA_L-elsbetiae_contig12651.2142.1|Name=mRNA_L-elsbetiae_contig12651.2142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1368bp|location=Sequence derived from alignment at L-elsbetiae_contig12651:461..4798- (Laminarionema elsbetiae ELsaHSoW15)
CAGGACTCTCGGGACTGGGAAGCCCTCACGGGGAACGAGCAGCACTTCAT
CAGCATGGTCTTGGCCTTCTTCGCCGCCAGCGACGGGATCGTCATGGAGA
ACCTTCAGGACTCTCGGGACTGGGAAGCCCTCACGGGGAACGAGCAGCAC
TTCATCAGCATGGTCTTGGCCTTCTTCGCCGCCAGCGACGGGATCGTCAT
GGAGAACCTTGTGGAGAGATTCAGCCAGGAAGTACAGCTTCCCGAGGCGC
GTTGCTTCTATGGGTTCCAGATCGCTATGGAATCGATCCACCAGGAGATG
TGGAGAGATTCAGCCAGGAAGTACAGCTTCCCGAGGCGCGTTGCTTCTAT
GGGTTCCAGATCGCTATGGAATCGATCCACCAGGAGATGTACGCCCTGCT
GCTGGACACGTACATCAAGGACCGGCAGGAACGAGATCAGCTGTTCAACG
CCTACAATAACATCCCTTGCGTCAAGCAGAAAGGTACGCCCTGCTGCTGG
ACACGTACATCAAGGACCGGCAGGAACGAGATCAGCTGTTCAACGCCTAC
AATAACATCCCTTGCGTCAAGCAGAAAGCCGATTGGGCGATGAGGTGGAT
CGGCAGCGACGCCACTTTCGCTGAGAGACTTGTCGCCTTCGCCGCTGTCG
AGCCGATTGGGCGATGAGGTGGATCGGCAGCGACGCCACTTTCGCTGAGA
GACTTGTCGCCTTCGCCGCTGTCGAGGGCATTTTTTTCTCGGGGAGCTTC
TGTGCAATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCGGGCCTGACGTT
CAGCAACGAGATGATCAGCCGCGACGAGGGTCTGCACTGCGACTTCGCCT
GCCAGCTGTTCCACTCCCTGGAGAACAAGCCCACCCGGGACACGGTCATG
GCCATTGTCAAGGAGGCCGTCGAGGTCGAGAAGAGCTTCATCTGCGGGGG
CATTTTTTTCTCGGGGAGCTTCTGTGCAATCTTTTGGCTCAAGAAGCGCG
GTCTCATGCCGGGCCTGACGTTCAGCAACGAGATGATCAGCCGCGACGAG
GGTCTGCACTGCGACTTCGCCTGCCAGCTGTTCCACTCCCTGGAGAACAA
GCCCACCCGGGACACGGTCATGGCCATTGTCAAGGAGGCCGTCGAGGTCG
AGAAGAGCTTCATCTGCGGGGCCCTTCCCTGCAGCCTGATCGGGATGAAC
GCCCAAGTGATGGCGCAGTACATCGAGTTCGTGGCTGACCGACTGCTAGG
ATCGCTCGGCTATGAAAAGGCCCTTCCCTGCAGCCTGATCGGGATGAACG
CCCAAGTGATGGCGCAGTACATCGAGTTCGTGGCTGACCGACTGCTAGGA
TCGCTCGGCTATGAAAAG
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