mRNA_L-elsbetiae_contig12651.2142.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: D7G418_ECTSI (Ribonucleoside-diphosphate reductase small chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G418_ECTSI) HSP 1 Score: 444 bits (1143), Expect = 1.630e-153 Identity = 217/228 (95.18%), Postives = 224/228 (98.25%), Query Frame = 1 Query: 1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKD+QERD LFNAYN+IPCVKQKADWAMRWIGSDATFAERLVAFAAVEG+FFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLF SLENKP+R+TVMAIV+EAVEVEKSFICGALPCSLIGMNA VM+QYIEFVADRLLGSLGY K Sbjct: 222 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDNLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVREAVEVEKSFICGALPCSLIGMNAGVMSQYIEFVADRLLGSLGYGK 449
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A835YXN6_9STRA (Ferritin-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN6_9STRA) HSP 1 Score: 357 bits (917), Expect = 4.760e-121 Identity = 174/227 (76.65%), Postives = 193/227 (85.02%), Query Frame = 1 Query: 4 DSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 D+ DWE L+ E+HFISMVLAFFA+SDGIVMENLV RF EVQ PEARCFYGFQIAMESIHQEMYA LLD YIKDR E+D LFNA+ I C+K+KADWA RWIGS A+FAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC+L+ LE +R ++ I+ EAV+VEK FIC ALP SLIGMNA M YIEFVADR+L SLGY+K Sbjct: 95 DAADWEKLSRQEKHFISMVLAFFASSDGIVMENLVHRFCAEVQAPEARCFYGFQIAMESIHQEMYAALLDAYIKDRNEKDTLFNAHLKIHCIKRKADWAERWIGSTASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACELYRMLERPLSRARILHIITEAVDVEKDFICDALPVSLIGMNAATMRTYIEFVADRMLQSLGYDK 321
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A7S2WPD1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPD1_9STRA) HSP 1 Score: 359 bits (922), Expect = 9.190e-121 Identity = 167/227 (73.57%), Postives = 201/227 (88.55%), Query Frame = 1 Query: 4 DSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 D RDWE+L+ +EQHF+ MVLAFFA+SDG+VMENL RF +EVQLPEARCFYGFQIAME++HQEMY+LLLDTYI+D ER QLF+AY ++P VK KADWA+RWIGSDA+FA+RLVAFAAVEGIFFSGSFCAI+WLKKRGLMPGLTFSNE+ISRDEGLHCDFAC+++ ++++ R+++ I+ EAVEVEK FIC ALP SLIGMN+ +M+QYIEF ADRLL +LG EK Sbjct: 166 DRRDWESLSESEQHFVKMVLAFFASSDGVVMENLAHRFCREVQLPEARCFYGFQIAMEAVHQEMYSLLLDTYIRDPDERAQLFHAYQHVPAVKAKADWALRWIGSDASFAKRLVAFAAVEGIFFSGSFCAIYWLKKRGLMPGLTFSNELISRDEGLHCDFACEMYRMIQHRLDRESITQIITEAVEVEKGFICDALPVSLIGMNSDLMSQYIEFCADRLLTALGEEK 392
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A067FZP6_CITSI (Uncharacterized protein n=5 Tax=Pentapetalae TaxID=1437201 RepID=A0A067FZP6_CITSI) HSP 1 Score: 340 bits (872), Expect = 6.760e-115 Identity = 159/228 (69.74%), Postives = 191/228 (83.77%), Query Frame = 1 Query: 1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 QD R WEALT +E+HF++ VLAFFAASDGIV+ENL RF EVQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIKD E+++LF+A +PCV +KA WA+ WI TFAERL+AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+ L K + + V A+VKEAVE+E+ F+C ALPC+L+GMN ++M+QYIEFVADRLLG+LGY K Sbjct: 48 QDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGK 275
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A7J6X3S5_THATH (Ribonucleoside-diphosphate reductase small chain n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A0A7J6X3S5_THATH) HSP 1 Score: 340 bits (872), Expect = 1.160e-114 Identity = 157/228 (68.86%), Postives = 194/228 (85.09%), Query Frame = 1 Query: 1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 QD R WE LT +E+HFI+ VLAFFAASDGIV+ENL RF +EVQ+ EAR FYGFQIA+E+IH EMY+LLL++YIKD E+++LFNA IPCVK+KA+WA+RWI +FAER++AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+ L+NK + + V IV +AVE+E+ F+C A+PC+L+GMN +M+QYIEFVADRL+G+LGY+K Sbjct: 48 QDQRQWETLTKDEKHFITHVLAFFAASDGIVLENLGVRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLESYIKDSNEKNRLFNAIETIPCVKKKAEWALRWIDGSESFAERVIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLKNKLSEERVRGIVSDAVEIEREFVCEAIPCALVGMNCDLMSQYIEFVADRLIGALGYDK 275
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A1U7Z6U0_NELNU (ribonucleoside-diphosphate reductase small chain-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7Z6U0_NELNU) HSP 1 Score: 339 bits (870), Expect = 1.360e-114 Identity = 161/228 (70.61%), Postives = 192/228 (84.21%), Query Frame = 1 Query: 1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 QD RDWE LT E+HFI++VLAFFAASDGIV+ENL RF +EVQ EAR FYGFQIA+E+IH EMY+LLL++YIKD E+++LF+A IPCV++KA W +RWI S +FAERLVAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+ L+ K + + V IV EAVE+E+ F+C ALPC+L+GMNA +M+QYIEFVADRLLG+LGY K Sbjct: 48 QDLRDWENLTHGEKHFITLVLAFFAASDGIVIENLASRFMKEVQNSEARAFYGFQIAIENIHSEMYSLLLESYIKDAAEKNRLFHAIETIPCVEKKAQWTLRWITSSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYEFLKQKLSEERVKGIVAEAVEIEREFVCDALPCALVGMNADLMSQYIEFVADRLLGALGYGK 275
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A067DYP7_CITSI (Uncharacterized protein n=6 Tax=rosids TaxID=71275 RepID=A0A067DYP7_CITSI) HSP 1 Score: 339 bits (870), Expect = 1.360e-114 Identity = 159/228 (69.74%), Postives = 190/228 (83.33%), Query Frame = 1 Query: 1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 QD R WE+LT +E+HFI+ VLAFFAASDGIV+ENL RF +EVQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIK+ E+ +LF A+ +PCV +KADWA+ WI TFAERL+AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+ L NK + + V IVKEAVE+E+ F+C ALPC+L+GMN +M+QYIEFVADRLLG+LG K Sbjct: 48 QDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGK 275
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A2P6QXD4_ROSCH (Putative oxidoreductase n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6QXD4_ROSCH) HSP 1 Score: 340 bits (871), Expect = 1.480e-114 Identity = 161/228 (70.61%), Postives = 192/228 (84.21%), Query Frame = 1 Query: 1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 QD + WEALT +E+HFIS VLAFFAASDGIV+ENL RF +VQ+PEAR FYGFQ+AME+IH EMY+LLL+TYIKD +E+ +LFNA NIPCV +KA WA+ WI S +FAERLVAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+ L+ + + V I++EAVE+E F+C ALPC+LIGMN+ +M+QYI+FVADRLL +LGYEK Sbjct: 61 QDVQQWEALTDSEKHFISHVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQLAMENIHSEMYSLLLETYIKDPKEKHRLFNAIENIPCVSRKAKWALHWINSSNSFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLNPEKVHGIIREAVEIETEFVCDALPCALIGMNSALMSQYIKFVADRLLVALGYEK 288
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A0X3NX54_SCHSO (Ribonucleoside-diphosphate reductase subunit M2 n=2 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0X3NX54_SCHSO) HSP 1 Score: 339 bits (869), Expect = 3.770e-114 Identity = 165/229 (72.05%), Postives = 193/229 (84.28%), Query Frame = 1 Query: 1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIG-SDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 +D DWE+L E+HFIS VLAFFAASDGIV ENLVERFSQEVQ+PEARCFYGFQIA+E+IH EMY+LL+DTYIKD ERD LFNA +PCVK+KADWA++WIG S +TF ERLVAFAAVEG+FFSGSF +IFWLKKRGLMPGLTFSNE+ISRDEGLH DFAC LF + NKP+++ V I++EAV++E F+ ALP LIGMN ++MAQYI FVADRLL LG+EK Sbjct: 68 KDLGDWESLKDGEKHFISYVLAFFAASDGIVNENLVERFSQEVQIPEARCFYGFQIAIENIHSEMYSLLIDTYIKDPIERDFLFNAVQTLPCVKKKADWALKWIGDSKSTFPERLVAFAAVEGVFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFKHIRNKPSKERVEKIMREAVDIEVEFLTDALPVDLIGMNCRLMAQYIRFVADRLLTELGFEK 296
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Match: A0A3R7GRY8_CLOSI (Ribonucleoside-diphosphate reductase subunit M2 n=3 Tax=Opisthorchiidae TaxID=6196 RepID=A0A3R7GRY8_CLOSI) HSP 1 Score: 339 bits (870), Expect = 4.660e-114 Identity = 164/229 (71.62%), Postives = 193/229 (84.28%), Query Frame = 1 Query: 1 QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDRQERDQLFNAYNNIPCVKQKADWAMRWIG-SDATFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFHSLENKPTRDTVMAIVKEAVEVEKSFICGALPCSLIGMNAQVMAQYIEFVADRLLGSLGYEK 684 +D DW +L E+HFIS VLAFFAASDGIV+ENLVERFSQEVQ+PE RCFYG QIA+E+IH EMY+LL+DTYIKD ERD LFNA +N+ CV QKA WA+ WIG + +TFAER+VAFAAVEGIFFSGSF AIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+ + KP +D V+AI+KEAVE+E+ F+ ALP SLIGMN ++M +YIEF+ADRLL LG+EK Sbjct: 85 KDFSDWNSLKVGERHFISYVLAFFAASDGIVLENLVERFSQEVQVPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDPTERDFLFNAISNLECVAQKAQWALNWIGDTHSTFAERIVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYKYIVQKPAKDRVLAIIKEAVEIEQKFLSDALPVSLIGMNCKLMCRYIEFIADRLLVELGHEK 313 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12651.2142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12651.2142.1 >prot_L-elsbetiae_contig12651.2142.1 ID=prot_L-elsbetiae_contig12651.2142.1|Name=mRNA_L-elsbetiae_contig12651.2142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp QDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCback to top mRNA from alignment at L-elsbetiae_contig12651:461..4798- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12651.2142.1 ID=mRNA_L-elsbetiae_contig12651.2142.1|Name=mRNA_L-elsbetiae_contig12651.2142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4338bp|location=Sequence derived from alignment at L-elsbetiae_contig12651:461..4798- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12651:461..4798- >mRNA_L-elsbetiae_contig12651.2142.1 ID=mRNA_L-elsbetiae_contig12651.2142.1|Name=mRNA_L-elsbetiae_contig12651.2142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1368bp|location=Sequence derived from alignment at L-elsbetiae_contig12651:461..4798- (Laminarionema elsbetiae ELsaHSoW15)back to top |