mRNA_L-elsbetiae_contig1265.2139.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1265.2139.1
Unique NamemRNA_L-elsbetiae_contig1265.2139.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 4.050e-83
Identity = 204/430 (47.44%), Postives = 247/430 (57.44%), Query Frame = 1
Query:   70 MNELHCAARDGSAKRTIAVLSRGVISIDHRTSTKGFTPLMLAVSFDHPRVVGILLNRGANVAIVNDSGLAALHMS-AHEGGLAVTKLLLKAGADLEATTPG--FTXXXXXXXXXXXXXXXXXXXXXXNPNSRAMDGAXXXXXXXXXXXXXXXXXXXXXXXXPLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRFLLQQEWKASG--QEVAYLDTRDNYGATPLFCSIQACRSCSPRITRLLVDAGADTATAVQVAYEEDFVLFDGMPLAIADRLLSEKIV-DGKDATEEQLHSLEAVRRLLMRVEAVHAASWLWASDVLSVAHAAAEDTGSATKATPTP----LVLVLPILRRRAGRPRVLWAALFRHSRK 1329
            +N+LH A   GSA+ T AVL+ G + ID R S  G TPLM+AV   H R+  +L+ +GANV+I +  G  ALH   A E   A+ KLL KAGADL+A  PG             XXXXXXXXXXXXXNP+ +  DG+                        PLL   S     T +PLD AA +GH +V RELIQE+GIEGC   S G  AL  AA  QH++IM +LT AGVVDTGKAL  A   G E SV+FLL+   K  G   E AYL+ RD  G TPL    Q C S +PRI R+LVDAGADT + VQV   +  V+F+  PLA     L +KIV DGK AT+E L  LEA+ RLL+RV+AVHA SWLW S    +        G AT+  P P    L L+LPIL+RR  R   L A L R+S K
Sbjct:  106 LNQLHRAVLVGSAELTQAVLAGGTVEIDQRNSY-GATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFI--------GRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 1.230e-69
Identity = 199/430 (46.28%), Postives = 242/430 (56.28%), Query Frame = 1
Query:   70 MNELHCAARDGSAKRTIAVLSRGVISIDHRTSTKGFTPLMLAVSFDHPRVVGILLNRGANVAIVNDSGLAALHMSAHEGGLAVTKLLLKAGADLEATTPGFTXXXXXXXXXXXXXXXXXXXXXX-NPNSRA-MDGAXXXXXXXXXXXXXXXXXXXXXXXXPLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRFLLQQEWKASGQEVAYLDTRDNYGATPLFCSIQAC----RSCSPRITRLLVDAGADTATAVQVAYEEDFVLFDGMPLAIADRLLSEKIVDGKDATEEQLHSLEAVRRLLMRVEAVHAASWLWAS---DVLSVAHAAAEDTGSATKATPTPLVLVLPILRRRAGRPRVLWAALFRHSRKP 1332
            MN LH AA  GS +RT  +L+ G   I+  T    +TPL+ A S  H  V+GILL++GANV+IV D+G+ ALH+                            XXXXXXXXXXXXXXXXXXXXXX N + R  +DG                         PL+T        TLLPLD AA NG+L V RELIQ VGIEGCGG S G  AL MA   + V  M +LT AGVVDTG+AL  +   G+E SV++LLQ   K  G   AY++ RD  G TPL  SI  C    +S  PR+ RLLV+AGADT T ++       VLF   PL +   +L +K VDG   ++++L  LE +RRLL++VEAVHA SWLW S   D       AAE T +AT A    L  VLPILRRRA RP V+W AL RH RKP
Sbjct:    1 MNSLHDAAFKGSTERTAELLATGSWDINQGT-VNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLP---TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPG-AYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVT-TATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424          
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 3.250e-69
Identity = 194/433 (44.80%), Postives = 243/433 (56.12%), Query Frame = 1
Query:   49 QQ*PWVAMNELHCAARDGSAKRTIAVLSRGVISIDHRTSTKGFTPLMLAVSFDHPRVVGILLNRGANVAIVNDSGLAALHMSAHEGGLAVTKLLLKAGADLEATTPGFTXXXXXXXXXXXXXXXXXXXXXX--NPNSRAMDGAXXXXXXXXXXXXXXXXXXXXXXXXPLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRFLLQQ-EWKASGQEVAYLDTRDNYGATPLFCSIQACRSCSPRITRLLVDAGADTATAVQVAYE--EDFVLFDGMPLAIADRLLSEKIVDGKDATEEQLHSLEAVRRLLMRVEAVHAASWLWASDVLSVAHAAAEDTGSATKATPTPLVLVLPILRRRAGRPRVLWAALFRHSRKP 1332
            QQ P    N LH AA  GS + T  VL+ G   ID + +  G+T LMLA    + R+VG++LN+GA V+I                              +EATT     XXXXXXXXXXXXXXXXXXXXX  N NSR  DGA                        PLLT      G T LPLD AA NGH EV  ELI++VGI+GCGG+SGGV AL+ AA+ +++ IM +LT+AGVVDTG AL+ A   G E  ++FLL+Q   + +  E AY++TRD  G TPL   IQ  R   PR+ RLLV+AGADT + V V  +   D V    + L +       K+V    A+ EQLH LEA+RRLL+RVEAVHA SWLW SD+ ++  AAA  T   T A  T + L + + RRRA   +V  AAL R+S KP
Sbjct:    8 QQRPRGPSNRLHAAAECGSFEATATVLASGAFDID-QGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYR---PRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTT-AISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 1.220e-66
Identity = 214/435 (49.20%), Postives = 263/435 (60.46%), Query Frame = 1
Query:   49 QQ*PWVAMNELHCAARDGSAKRTIAVLSRGVISIDHRTSTKGFTPLMLAVSFDHPRVVGILLNRGANVAIVNDSGLAALHMSAHEGGLAVTKLLLKAGADLEATTPGFTXXXXXXXXXXXXXXXXXXXXXXNPNSRAMDGAXXXXXXXXXXXXXXXXXXXXXXXX-PLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRFLLQQEWKASGQEVAYLDT-RDNYGATPLFCSIQAC--RSCSPRITRLLVDAGADTATAVQVAYEEDFVLFDGMPLAIADRLLSEKIVDGKDATEEQLHSLEAVRRLLMRVEAVHAASWLWASDV----LSVAHAAAEDTGSATKATPTPLVLVLPILRRRAGRPRVLWAALFRHSRK 1329
            QQ P V +N+LH AARDGS   T A+LS G I ID   S+ G TPLM A+  DHP VV ILL++GA+V+ +ND G  ALH+SA  G +                     XXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXX     PLLT    +     LPLD AA NG L V  EL+Q  GI GCGG +GGVTAL++AA + H+++M  LT+AGVVDTG AL+ A   G    V+FLLQQ+     ++ AY+   RD  G TPL C+I     +SCSP++ RLLVDAGADT + V+   +   +     PL++A   L  KI   K   +E L  LE +RRLL+RVEAVHA SWLW + V    L     AA +T S++   P  L  VLPILRRRA     + A+L R++ K
Sbjct:    8 QQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGG-TPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLT--RVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQ-LRTVLPILRRRARGRGFVSASLCRYAVK 438          
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 7.150e-61
Identity = 162/432 (37.50%), Postives = 212/432 (49.07%), Query Frame = 1
Query:   49 QQ*PWVAMNELHCAARDGSAKRTIAVLSRGVISIDHRTSTKGFTPLMLAVSFDHPRVVGILLNRGANVAIVNDSGLAALHMSAHEGGLAVTKLLLKAGADLEATTPG--FTXXXXXXXXXXXXXXXXXXXXXXNPNSRAMDGAXXXXXXXXXXXXXXXXXXXXXXXXPLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRFLLQQ-EWKASGQEVAYLDTRDNYGATPLFCSIQACRSCSPRITRLLVDAGADTATAVQVAYEEDFVLFDGMPLAIADRLLSEKIVDGKDATEEQLHSLEAVRRLLMRVEAVHAASWLWASDVLSVAHAAAEDTG--SATKATPTPLVLVLPILRRRAGRPRVLWAALFRHSRK 1329
            QQ P    N L  AA  GS K    +L+ G   ID      G+TPLM+A    +PR+V +LLN+GA V + +                          A L+A T     T                      N N+R  DGA                        PLLT  S       LPLD AA NGH EV  ELI++VGI+GCGG+SGG  AL+ AA    ++IM +LT AGVVDTG AL+ A   G E  ++FLL+Q   + S    AY++T +  G T L   IQ CR   PR+ +LLV+AGADT + V +  +     F   PL +   LL  +    K  T E+ + LE +RRLL+R EAVHA SWLW SD  ++ HA A+ TG  +AT    TP ++++ I RR  GR  +L AAL R+S K
Sbjct:    8 QQWPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEV-GWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCR---PRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR--SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLM-IGRRTRGRKGLL-AALLRYSSK 431          
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.320e-57
Identity = 190/431 (44.08%), Postives = 234/431 (54.29%), Query Frame = 1
Query:   46 EQQ*PWVAMNELHCAARDGSAKRTIAVLSRGVISIDHRTSTKGFTPLMLAVSFDHPRVVGILLNRGANVAIVNDSGLAALHMSAHEGGLAVTKLLLKAGADLEATTP--GFTXXXXXXXXXXXXXXXXXXXXXXNPNSRAMDGAXXXXXXXXXXXXXXXXXXXXXXXXPLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRFLLQQEWKASGQEVAYLD-TRDNYGATPLFCSIQACRSCSPRITRLLVDAGADTATAVQVAYEEDFVLFDGMPLAIADRLLSEKIVDGKDATEEQLHSLEAVRRLLMRVEAVHAASWLWASDVLSVAHAAAEDTGSATKATPTPLVLVLPILRRRAGRPRVLWAALFRHSRK 1329
            +++ P    NELH AA  GS +RT A+LS G+I+I+ +    G+TPLM+A    + R+V IL+  GANV IV D G  A                  AGADLEA T   G            XXXXXXXXXXXXN NSR  D A XXXXXXXXXXXXXXXXXXX    PLL I  +      +PLD AA  G   V RE + ++GI+GCGG S G  AL  AA+ Q V+ M VL +AGVVDTG ALI A+   +E S++FLL+Q+        AY+D  RD +G TPL CSI+              D G                        + D  L E  V G+D TEEQ H L AV RLL+RVEAVHAASWLW SD   +AH A  +    TK TP+P   + P+L     R  +L +A+ R+S K
Sbjct:    6 QEKWPRGPKNELHFAADTGSTQRTAAILSSGLININ-QGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLL-IRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLLCSIE--------------DEG------------------------LVDHYLGENRVIGRDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTA--EVTKRTKVTPSPRSRMFPVLGLSTRRNALL-SAVLRYSSK 393          
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 6.340e-55
Identity = 195/426 (45.77%), Postives = 240/426 (56.34%), Query Frame = 1
Query:   73 NELHCAARDGSAKRTIAVLSRGVISIDHRTSTKGFTPLMLAVSFDHPRVVGILLNRGANVAIVNDSGLAALHMSAHEGGLAVTKLLLKAGADLEATTPGFTXXXXXXXXXXXXXXXXXXXXXXNPNSRAMDGAXXXXXXXXXXXXXXXXXXXXXXXXPLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRFLLQQEWKASGQEVAYLDTRDNYGATPLFCSIQACRSCSPRITRLLVDAGADTATAVQVAYEEDFVLFDGM-------PLAIADRLLSEKIVDGKDATEEQLHSLEAVRRLLMRVEAVHAASWLWASDVLSVAHAAAEDTGSATKATPTPLVLVLPILRRRAGRPRVLWAALFRHSRK 1329
            NELH AA DGS++RT ++L+ G I ID +   +G+TPLM A    H  V+ +LLNRGA++  V+D                                    XXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXX  L       G T +PLD AA NGHL VAREL+Q  GI GC GAS GV AL  AA  QH+++M +L  AGVVDTG AL+A V  G+E +++FLL+Q+ + + +       RD  G TPL  ++     CSPR+ RLLVDAGAD   AV+V         DG        PL  A R L+EK+VD   AT +QL +L A RRLL++VE VHA SWLW       A A  +           PL   LPI+ RR+ R       +FR ++K
Sbjct:   13 NELHKAALDGSSQRTESLLAGGRIDID-QGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTT-GPCSPRVVRLLVDAGADATLAVRVP--------DGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPA-APGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKK 427          
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.600e-54
Identity = 195/428 (45.56%), Postives = 242/428 (56.54%), Query Frame = 1
Query:   40 NTEQQ*PWVAMNELHCAARDGSAKRTIAVLSRGVISIDHRTSTKGFTPLMLAVSFDHPRVVGILLNRGANVAIVNDSGLAALHMSAHEGGLAVTKLLLKAGADLEATTPGFTXXXXXXXXXXXXXXXXXXXXXXNPNSRAMDGAXXXXXXXXXXXXXXXXXXXXXXXXPLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRFLLQQEWKASGQEVAYLDTRDNYGATPLFCSIQACRSCSPRITRLLVDAGADTATAVQVAYEEDFVLFDGMPLAIADRLLSEKIVDGKDATEEQLHSLEAVRRLLMRVEAVHAASWLWASDVLSVAHA--AAEDTGSATKATPTPLVLVLPILRRRAGRPRVLWAALFR 1317
            +T Q  P    N+LH AA  GSA R  A+LS G + I+ + + KG+TPLMLA    H  V   LL +GANV++  D                                    XXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXX    +   H              GH EV RELIQ++G+ GCGG S GV +L++AA  Q+V+IMG+LT  GVVDTG+AL+ A    +E SV+FLLQ +  A G      +T D +G TPL C+I+AC S SPRI R L+D GADT + V V    ++      PL  A R L +  V GK+ATEEQL SL+A+ RLL ++EAVHA SWLW S    + HA  AA      T A PT L  +  +LR   G+  V+  A++R
Sbjct:   23 STSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDIN-QGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQH--------------GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQ--AGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPT-LKRMSTVLRTTVGKRGVVLRAVYR 424          
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 7.850e-52
Identity = 128/259 (49.42%), Postives = 165/259 (63.71%), Query Frame = 1
Query:  574 GGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAG-VVDTGKALIAAVLCGQEPSVRFLLQQEWKASGQEVAYLD-TRDNYGATPLFCSIQ--ACRSCSPRITRLLVDAGADTATAVQVA-YEEDFVLFDGMPLAIADRLLSEKIVDGKDATEEQLHSLEAVRRLLMRVEAVHAASWLWAS-DVLSVAHAAAED-TGSATKATPTPLVLVLPILRRRAGRPRVLWAALFRHSRK 1329
            G + +PL+ AA +G+ +VARE+I++VGI GCGG SGGV AL+ AA  +H+E M VL  AG VVDTG ALI A   G+  +V+FLL++         AY++ TRD YG TP+ C++   A R CSP+I RLLVDAGA+T  AV V      +      PLA   RLL E  VDG+ AT+EQL  L+  R LL R EAVHA SWLWAS +   +A AA +  T +A+ A  TPL  + P+LRR+ G   VL   LFR+SRK
Sbjct:  180 GVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRR---QADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435          
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 3.540e-51
Identity = 175/377 (46.42%), Postives = 213/377 (56.50%), Query Frame = 1
Query:   43 TEQQ*PWVAMNELHCAARDGSAKRTIAVL-SRGVISIDHRTSTKGFTPLMLAVSFDHPRVVGILLNRGANVAIVNDSGLAALHMSAHEGGLAVTKLLLKAGADLEATTPGFTXXXXXXXXXXXXXXXXXXXXXXNPNSRAMDGAXXXXXXXXXXXXXXXXXXXXXXXX--PLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCGGASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRFLLQQEW--KASGQEVAYL-DTRDNYGATPLFCSIQACRS---CSPRITRLLVDAGADTATAVQVAYEEDFVLFDGMPLAIADRLLSEKIVDGKDATEEQLHSLEAVRRLLMRVEA 1146
            T Q  P    N+LH AA DGS +R +A+L SR  I+ID   +  G+TPLMLA      RVV ILLN+GANV++V + G  ALH S  +GG  V                   XXXXX             XXXX          XXXXXXXXXXXXXXXXXXXXX     PLLT   +  G T +PLD AA  G  EV RELI++V I+GCGGASGGV AL++AA  Q+V++M VL  AGV+DTG+ALI A     E  V+ LLQQ     A G+   Y+ DT D  G TPL CSI    +   CSPR+ RLLVDAGADT +AV +      +     P+  A   L E +  GK A E+ +H L A+ RL  +VEA
Sbjct:    7 TAQPWPRGPQNDLHRAANDGSVERVVALLASRSSIAID-AGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLT-KPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEA 381          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1265.2139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT11_ECTSI4.050e-8347.44EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI1.230e-6946.28EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE3.250e-6944.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK3_ECTSI1.220e-6649.20EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KQV0_9PHAE7.150e-6137.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1I8_ECTSI1.320e-5744.08EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LL76_ECTSI6.340e-5545.77EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1U9_ECTSI1.600e-5445.56EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI7.850e-5249.42EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
A0A6H5JL33_9PHAE3.540e-5146.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1265contigL-elsbetiae_contig1265:24055..26279 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.8
Seed ortholog evalue1.1e-72
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1790
Cds size1269
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1265.2139.1prot_L-elsbetiae_contig1265.2139.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1265 24507..26210 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815455.8646207-UTR-L-elsbetiae_contig1265:24054..245061622815455.8646207-UTR-L-elsbetiae_contig1265:24054..24506Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1265 24055..24506 -
1691682906.4035385-UTR-L-elsbetiae_contig1265:24054..245061691682906.4035385-UTR-L-elsbetiae_contig1265:24054..24506Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1265 24055..24506 -
1622815455.8949811-UTR-L-elsbetiae_contig1265:26210..262791622815455.8949811-UTR-L-elsbetiae_contig1265:26210..26279Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1265 26211..26279 -
1691682906.4416702-UTR-L-elsbetiae_contig1265:26210..262791691682906.4416702-UTR-L-elsbetiae_contig1265:26210..26279Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1265 26211..26279 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815455.8745663-CDS-L-elsbetiae_contig1265:24506..245281622815455.8745663-CDS-L-elsbetiae_contig1265:24506..24528Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1265 24507..24528 -
1691682906.4157577-CDS-L-elsbetiae_contig1265:24506..245281691682906.4157577-CDS-L-elsbetiae_contig1265:24506..24528Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1265 24507..24528 -
1622815455.8858907-CDS-L-elsbetiae_contig1265:24963..262101622815455.8858907-CDS-L-elsbetiae_contig1265:24963..26210Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1265 24964..26210 -
1691682906.426415-CDS-L-elsbetiae_contig1265:24963..262101691682906.426415-CDS-L-elsbetiae_contig1265:24963..26210Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1265 24964..26210 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1265.2139.1

>prot_L-elsbetiae_contig1265.2139.1 ID=prot_L-elsbetiae_contig1265.2139.1|Name=mRNA_L-elsbetiae_contig1265.2139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=423bp
MNELHCAARDGSAKRTIAVLSRGVISIDHRTSTKGFTPLMLAVSFDHPRV
VGILLNRGANVAIVNDSGLAALHMSAHEGGLAVTKLLLKAGADLEATTPG
FTPLHLATAEGHSEVMRVLIEAGANPNSRAMDGATPLYMAARSGHMDAIK
VLLRAKADPLLTIDSSHCGGTLLPLDEAAYNGHLEVARELIQEVGIEGCG
GASGGVTALKMAARRQHVEIMGVLTSAGVVDTGKALIAAVLCGQEPSVRF
LLQQEWKASGQEVAYLDTRDNYGATPLFCSIQACRSCSPRITRLLVDAGA
DTATAVQVAYEEDFVLFDGMPLAIADRLLSEKIVDGKDATEEQLHSLEAV
RRLLMRVEAVHAASWLWASDVLSVAHAAAEDTGSATKATPTPLVLVLPIL
RRRAGRPRVLWAALFRHSRKPY*
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mRNA from alignment at L-elsbetiae_contig1265:24055..26279-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1265.2139.1 ID=mRNA_L-elsbetiae_contig1265.2139.1|Name=mRNA_L-elsbetiae_contig1265.2139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2225bp|location=Sequence derived from alignment at L-elsbetiae_contig1265:24055..26279- (Laminarionema elsbetiae ELsaHSoW15)
CGGCGGGCACTCTCTCACCCTCACTTCACTTCCCGACACAACACAGAGCA GCAGTGACCTTGGGTTGCTATGAATGAACTGCACTGTGCCGCGCGTGATG GCTCTGCCAAGCGTACGATAGCCGTGCTTTCGAGGGGAGTTATCAGCATC GATCACAGGACATCAACGAAGGGCTTCACTCCTCTCATGTTGGCAGTCAG CTTCGATCACCCGCGAGTTGTCGGCATCCTCCTGAACAGGGGAGCCAACG TGGCAATAGTGAACGATAGTGGTCTCGCTGCTCTGCACATGTCGGCTCAT GAAGGAGGTTTGGCCGTGACGAAGCTGCTGCTGAAGGCCGGCGCCGACCT GGAAGCAACGACCCCAGGCTTCACACCACTTCACCTGGCTACGGCGGAAG GGCACTCGGAGGTGATGAGAGTGCTGATCGAGGCAGGGGCAAACCCCAAC AGCCGTGCGATGGATGGTGCGACACCGCTGTACATGGCGGCTAGGAGCGG ACACATGGATGCGATCAAGGTGCTCCTTCGTGCGAAAGCGGACCCGCTGT TGACCATAGATTCGAGTCACTGCGGCGGAACTCTCCTCCCTCTCGACGAG GCAGCGTATAACGGGCACCTGGAGGTCGCACGCGAGCTGATTCAGGAGGT TGGGATCGAGGGTTGTGGCGGTGCAAGCGGCGGTGTAACTGCTCTGAAGA TGGCCGCCCGGCGGCAGCACGTTGAGATCATGGGGGTGTTGACCAGCGCT GGAGTGGTCGATACAGGCAAAGCCCTGATCGCCGCCGTGTTATGTGGCCA AGAGCCATCCGTAAGGTTTCTGTTGCAGCAGGAGTGGAAAGCTAGCGGTC AAGAAGTTGCCTACCTAGATACCCGCGACAATTATGGTGCCACGCCCTTG TTTTGTAGTATTCAGGCTTGTCGCTCATGCTCTCCCAGAATCACGAGGTT GCTCGTGGATGCGGGGGCGGATACTGCGACAGCAGTTCAAGTCGCTTATG AAGAGGATTTTGTGCTTTTCGACGGCATGCCCCTGGCTATCGCAGACAGG CTACTCAGTGAAAAGATAGTCGATGGGAAAGACGCCACGGAGGAGCAACT ACACAGCCTGGAGGCTGTCCGGCGGTTGCTGATGAGGGTGGAGGCCGTCC ATGCGGCATCGTGGCTGTGGGCAAGCGATGTCCTCTCCGTCGCCCACGCT GCTGCAGAGGATACGGGCAGCGCTACCAAAGCGACTCCAACCCCGCTGGT ATTGGTGTTACCAATCTTGAGGCGAAGGGCTGGAAGGCCCAGGGTGCTCT GGGCTGCCCTGTTCAGGTGGGTGGTGAAGATGTTGGTCTAATAAAGGGTA TGAGATAGATGCTGTTAAACTCAATTTGAAGGCAGAACGGTACATAGTAC GTAGTGCTTGGTGGGCTAAGACATTCTGGTTCCTCCTCCTTGCTGCTGCG TCGTCCCATATTTTTCGTTTGTTTTTGGAGCCAAACGCTAAATACGGTCG TGCCTCCGATCAATGGTTGTGTTTGCGGGCTAACCGCCACCGCACTGCGC CCTACCTACCGCCTCAAAACTATGTTGCAGACGAGGAAGTAAGTGTACAT TTCTCTGTGTGGACCGCTTACGTGCAACGTTCTGTCCTTCCTGAAGGACT ACCGGTAAACGTTCCCAGCTCGCCCCGAACCATCGGTAAACCCAACTTTT CTCCCCATGGATTGCGCCGCTCGTTGTCTTGCCTCACCCGGTGTTCGACA GGCATTCGCGGAAGCCTTATTGACGGGAGTGGTTCGCGCGATGTGTCGAG TCGGTGTTTCGTCCCCGTTTGTGCGTTGCTTGCACTTGTGGCGGGGGGTG TTGACTGGGGGGACTACGGTAGTAGCATCAGCAGCGCCGCTGGCTTACAC ATAAGGGGGTGACTTCAGATCAACGGGGTCGTGGTGTGTCTGACGGATGT ACATATACAGTTCAAATGGAGCTTGGAGTACTCCGGTTTGCGTTTTCTCC GCGATACAACGAGGCGAGACAGGTAGCCGAAACACCCCGTGTACCCCAAA ACGCCTCTTGAAGCGTTGAATTCCTGTGTGTTCCATTAGTTTGGAAATCT GGCGTTGTGGTACATTGTTGACAGGAAGGAACGTTTTCCTGGACGAATGT AGCACTCAAGGAGACTTCTCACAACGAATGAATGTGACTCCGGGAGTATG GCACTACAGACTATATTTGCGTTGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1265:24055..26279-

>mRNA_L-elsbetiae_contig1265.2139.1 ID=mRNA_L-elsbetiae_contig1265.2139.1|Name=mRNA_L-elsbetiae_contig1265.2139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2538bp|location=Sequence derived from alignment at L-elsbetiae_contig1265:24055..26279- (Laminarionema elsbetiae ELsaHSoW15)
ATGAATGAACTGCACTGTGCCGCGCGTGATGGCTCTGCCAAGCGTACGAT
AGCCGTGCTTTCGAGGGGAGTTATCAGCATCGATCACAGGACATCAACGA
AGGGCTTCACTCCTCTCATGTTGGCAGTCAGCTTCGATCACCCGCGAGTT
GTCGGCATCCTCCTGAACAGGGGAGCCAACGTGGCAATAGTGAACGATAG
TGGTCTCGCTGCTCTGCACATGTCGGCTCATGAAGGAGGTTTGGCCGTGA
CGAAGCTGCTGCTGAAGGCCGGCGCCGACCTGGAAGCAACGACCCCAGGC
TTCACACCACTTCACCTGGCTACGGCGGAAGGGCACTCGGAGGTGATGAG
AGTGCTGATCGAGGCAGGGGCAAACCCCAACAGCCGTGCGATGGATGGTG
CGACACCGCTGTACATGGCGGCTAGGAGCGGACACATGGATGCGATCAAG
GTGCTCCTTCGTGCGAAAGCGGACCCGCTGTTGACCATAGATTCGAGTCA
CTGCGGCGGAACTCTCCTCCCTCTCGACGAGGCAGCGTATAACGGGCACC
TGGAGGTCGCACGCGAGCTGATTCAGGAGGTTGGGATCGAGGGTTGTGGC
GGTGCAAGCGGCGGTGTAACTGCTCTGAAGATGGCCGCCCGGCGGCAGCA
CGTTGAGATCATGGGGGTGTTGACCAGCGCTGGAGTGGTCGATACAGGCA
AAGCCCTGATCGCCGCCGTGTTATGTGGCCAAGAGCCATCCGTAAGGTTT
CTGTTGCAGCAGGAGTGGAAAGCTAGCGGTCAAGAAGTTGCCTACCTAGA
TACCCGCGACAATTATGGTGCCACGCCCTTGTTTTGTAGTATTCAGGCTT
GTCGCTCATGCTCTCCCAGAATCACGAGGTTGCTCGTGGATGCGGGGGCG
GATACTGCGACAGCAGTTCAAGTCGCTTATGAAGAGGATTTTGTGCTTTT
CGACGGCATGCCCCTGGCTATCGCAGACAGGCTACTCAGTGAAAAGATAG
TCGATGGGAAAGACGCCACGGAGGAGCAACTACACAGCCTGGAGGCTGTC
CGGCGGTTGCTGATGAGGGTGGAGGCCGTCCATGCGGCATCGTGGCTGTG
GGCAAGCGATGTCCTCTCCGTCGCCCACGCTGCTGCAGAGGATACGGGCA
GCGCTACCAAAGCGACTCCAACCCCGCTGGTATTGGTGTTACCAATCTTG
AGGCGAAGGGCTGGAAGGCCCAGGGTGCTCTGGGCTGCCCTGTTCAGATG
AATGAACTGCACTGTGCCGCGCGTGATGGCTCTGCCAAGCGTACGATAGC
CGTGCTTTCGAGGGGAGTTATCAGCATCGATCACAGGACATCAACGAAGG
GCTTCACTCCTCTCATGTTGGCAGTCAGCTTCGATCACCCGCGAGTTGTC
GGCATCCTCCTGAACAGGGGAGCCAACGTGGCAATAGTGAACGATAGTGG
TCTCGCTGCTCTGCACATGTCGGCTCATGAAGGAGGTTTGGCCGTGACGA
AGCTGCTGCTGAAGGCCGGCGCCGACCTGGAAGCAACGACCCCAGGCTTC
ACACCACTTCACCTGGCTACGGCGGAAGGGCACTCGGAGGTGATGAGAGT
GCTGATCGAGGCAGGGGCAAACCCCAACAGCCGTGCGATGGATGGTGCGA
CACCGCTGTACATGGCGGCTAGGAGCGGACACATGGATGCGATCAAGGTG
CTCCTTCGTGCGAAAGCGGACCCGCTGTTGACCATAGATTCGAGTCACTG
CGGCGGAACTCTCCTCCCTCTCGACGAGGCAGCGTATAACGGGCACCTGG
AGGTCGCACGCGAGCTGATTCAGGAGGTTGGGATCGAGGGTTGTGGCGGT
GCAAGCGGCGGTGTAACTGCTCTGAAGATGGCCGCCCGGCGGCAGCACGT
TGAGATCATGGGGGTGTTGACCAGCGCTGGAGTGGTCGATACAGGCAAAG
CCCTGATCGCCGCCGTGTTATGTGGCCAAGAGCCATCCGTAAGGTTTCTG
TTGCAGCAGGAGTGGAAAGCTAGCGGTCAAGAAGTTGCCTACCTAGATAC
CCGCGACAATTATGGTGCCACGCCCTTGTTTTGTAGTATTCAGGCTTGTC
GCTCATGCTCTCCCAGAATCACGAGGTTGCTCGTGGATGCGGGGGCGGAT
ACTGCGACAGCAGTTCAAGTCGCTTATGAAGAGGATTTTGTGCTTTTCGA
CGGCATGCCCCTGGCTATCGCAGACAGGCTACTCAGTGAAAAGATAGTCG
ATGGGAAAGACGCCACGGAGGAGCAACTACACAGCCTGGAGGCTGTCCGG
CGGTTGCTGATGAGGGTGGAGGCCGTCCATGCGGCATCGTGGCTGTGGGC
AAGCGATGTCCTCTCCGTCGCCCACGCTGCTGCAGAGGATACGGGCAGCG
CTACCAAAGCGACTCCAACCCCGCTGGTATTGGTGTTACCAATCTTGAGG
CGAAGGGCTGGAAGGCCCAGGGTGCTCTGGGCTGCCCTGTTCAGGCATTC
GCGGAAGCCTTATTGAGCATTCGCGGAAGCCTTATTGA
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