mRNA_L-elsbetiae_contig1264.2133.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1264.2133.1
Unique NamemRNA_L-elsbetiae_contig1264.2133.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: D7FT60_ECTSI (Nitroreductase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT60_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 2.280e-147
Identity = 214/249 (85.94%), Postives = 231/249 (92.77%), Query Frame = 1
Query:  205 DSDAEAFERITLARRATKHFDRRG-VPEDVLKKVLGLVLRAPSGFNIQPYECIVVTSEEGKQKLSAAMLGPNRERVLEAGATVVFASDLNSMKNVRKLTKMLGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLPLVVAKKISFAVVQRLGKGMPAVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSEEQRDFKTLR---QEVFHKEEFGTPLEGIPSL 939
            DSDAEAFER+TLARR+TKHFDRR  VP+DVLKKVL LVLRAPSGFNIQPYECIVVTS+E K KLS AMLGPNRERVL AGATVVFASDLNSMKNVRKLT ML +EGWP+GFI+KVPLYLSVFSTGHNRL RLPLV AKK+SFAVV+RLGKGMP VSGAE WAFK+TMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPS+++R+ KTLR   +EV H+EEFGTPLEG+PSL
Sbjct:   69 DSDAEAFERVTLARRSTKHFDRRRPVPDDVLKKVLALVLRAPSGFNIQPYECIVVTSDEAKHKLSRAMLGPNRERVLAAGATVVFASDLNSMKNVRKLTTMLAKEGWPEGFIKKVPLYLSVFSTGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKSTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIKTLRFPPEEVLHREEFGTPLEGVPSL 317          
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: A0A835Z5B9_9STRA (Nitroreductase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B9_9STRA)

HSP 1 Score: 248 bits (633), Expect = 2.280e-78
Identity = 123/237 (51.90%), Postives = 168/237 (70.89%), Query Frame = 1
Query:  214 AEAFERITLARRATKHFDRRGVPEDVLKKVLGLVLRAPSGFNIQPYECIVVTSEEGKQKLSAAMLGPNRERVLEAGATVVFASDLNSMKNVRKLTKMLGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLPLVVAKKISFAVVQRLGKGMPAVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSEEQRDFKTLR----QEVFHKEEFG 912
            ++AF+ I+ AR A K F    VP +VL+ +L + LRAPS FN+QPY+ +V+ S + KQ LS AML  N++RVL+AGATVVFA+D N MK++ K+  M  E G    F+RK+PLY++VFS+GHNR+ R  +   K++ F++ +RLG  +P V+ AE WAFKNTMLAV+  +LAA ++GLATCPMEGFD R+LRK   IP RYSVP+VVSIGYP    R  K  R    ++VF+  ++G
Sbjct:   12 SQAFKAISDARYANKEFSPEPVPAEVLQDLLQVTLRAPSAFNVQPYKALVINSPQSKQLLSKAMLSTNKKRVLDAGATVVFAADKNCMKDIGKVVDMFKEGGSNAAFVRKIPLYVAVFSSGHNRVLRPIMTFIKQVVFSIARRLGLELPPVNSAEAWAFKNTMLAVEAFMLAAAANGLATCPMEGFDPRQLRKQFHIPRRYSVPVVVSIGYPKPSDRPLKQSRRFPPEQVFYDNQWG 248          
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: A0A6H5L6J9_9PHAE (Nitroreductase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J9_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 1.010e-74
Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 1
Query:  502 MLGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLPLVVAKKISFAVVQRLGKGMPAVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSEEQRDFKTLR 882
            ML EEGWPKGFI KVPLYLSVFSTGHNRL RLPLV AKK+SFAVV+RLGKGMP VSGAE WAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPS+++R+ KTLR
Sbjct:    1 MLAEEGWPKGFINKVPLYLSVFSTGHNRLLRLPLVAAKKLSFAVVRRLGKGMPTVSGAEAWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSDDRREIKTLR 127          
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: A0A6V1NJ53_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NJ53_HETAK)

HSP 1 Score: 196 bits (498), Expect = 7.880e-57
Identity = 97/214 (45.33%), Postives = 144/214 (67.29%), Query Frame = 1
Query:  217 EAFERITLARRATKHFDRRGVPEDVLKKVLGLVLRAPSGFNIQPYECIVVTSEEGKQKLSAAMLGP-NRERVLEAGATVVFASDLNSMKNVRKLTKMLGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLPLVVAKKISFAVVQRLGKGMPAVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSE 855
            E F  + + RR+ + F    +P++ +  ++ L  RAPSGFN+QPY  ++V SEE K+ L+ AMLG  N+ RVLEA  T VFASDL ++++VR++  +L  +G PK  +      L++FS GH  L RLP ++ +K++F  V  +    P VS  ETWA KNTMLAVQ  +LA+ ++GL T PMEG+D RR+R+AL++P R++VP+VV+ GYP +
Sbjct:   74 EPFREVVMGRRSVRKFLPNPIPDETMDHIIDLTQRAPSGFNVQPYVIVLVKSEETKRALADAMLGASNKRRVLEAPVTAVFASDLENLRHVRRVEGLLRAQGLPKAAVDLARPGLTIFSGGHRALLRLPSLIVRKLAFRPVSLI-TASPKVSTPETWAVKNTMLAVQNYMLASVAYGLNTAPMEGYDARRVRRALKLPRRFTVPLVVATGYPGD 286          
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: A0A6S8C805_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8C805_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.060e-51
Identity = 96/221 (43.44%), Postives = 138/221 (62.44%), Query Frame = 1
Query:  205 DSDAEAFERITLARRATKHFD-RRGVPEDVLKKVLGLVLRAPSGFNIQPYECIVVTSEEGKQKLSAAMLGPNRERVLEAGATVVFASDLNSMKNVRKLTKMLGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLPLVVAKKISFAVVQRLGKGMPAVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSEEQR 864
            D+DAEAF RI   R  TK FD  + VP + L+K+L L  RAPS FN+QPY+ ++V  E  K++++  M   N ++VL A  T+VFASDL   + + K+  +  E G P+  ++      +VF    N   +    V KK  F+ + ++ + MP ++ +E WAFKNTM A Q  +L   ++GLAT PMEGFD RR+R AL IP RY +P+VVS+GYPSEE++
Sbjct:   57 DADAEAFSRIVKNRTCTKEFDPSKSVPLETLEKILSLTQRAPSSFNLQPYKAVIVRDEIVKKRVAYCMTDNNIKKVLNASLTLVFASDLKPGQEIDKIMALEREHGLPEQVVKARKFGATVFVGSSNEAEK----VVKKTLFSTISQVTQ-MPTINSSEGWAFKNTMTAAQTFILGCHAYGLATAPMEGFDARRIRDALYIPDRYEIPVVVSVGYPSEEEK 272          
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: A0A4D9D236_9STRA (Nitroreductase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D236_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.530e-45
Identity = 103/262 (39.31%), Postives = 152/262 (58.02%), Query Frame = 1
Query:  214 AEAFERITLARRATKHF-DRRGVPEDVLKKVLGLVLRAPSGFNIQPYECIVVTSEEGKQKLS-AAMLGPNRERVLEAGATVVFASDLNSMKNVRKLTKMLGEEG-WPKGFIRKVPLYLSVFSTGHN-RLFRLPLVVAKKISFAVVQRLGKGMPAVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGY---PSEE-------------QRDFKTLR---QEVFHKEEFGTPLEGI 930
            A  F +I  +R +  H+   + V    L ++L L  RAPS FNIQP++ +V+     + K++  AMLG N  RV  A  TVVFA+D+ S + + ++  +L + G +P+GF+ K+P + ++FSTG+   L R  L   K+++  VV    K +P +   ETWA KNTMLA    +LAA+SH L TCPMEGFD RRLR  L +P RY +P+VVS+GY   P EE             ++   +LR   +EV  +E +G P +G+
Sbjct:   22 AGPFSQIVHSRFSNTHYASHKPVHISTLNELLRLTQRAPSSFNIQPFKLVVIRDPTLRDKIAHQAMLGANGNRVRTAPVTVVFAADVESSRLMPQVVALLRQAGTFPEGFLNKIPFFANLFSTGYPFSLLRWCLYWGKRVAMHVVGWF-KAVPRLERPETWAVKNTMLAAMTFMLAASSHSLTTCPMEGFDARRLRHLLGLPTRYVLPVVVSLGYAATPGEEAAQGGKEGHAVSSKQPPPSLRFPMEEVVCEEAYGRPWKGV 282          
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: W2YM79_PHYPR (Nitroreductase domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=W2YM79_PHYPR)

HSP 1 Score: 162 bits (410), Expect = 9.720e-45
Identity = 93/235 (39.57%), Postives = 132/235 (56.17%), Query Frame = 1
Query:  244 RRATKHFDRRGVPEDVLKKVLGLVLRAPSGFNIQPYECIVVTSEEGKQKLSAAMLGPNRERVLEAGATVVFASDLNSMKNVRKLTKMLGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLPLVVAKKISFAVVQRLGKGMPAVSGAET--WAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSEEQRDFKTLRQ----EVFHKEEFGTPLEGI 930
            R A K F    VP + LK++L L  RAP+GFN+QPY C++V  ++ ++KL+ AM+  N  +V EA    VFA+DL   K V +L  ++ + G P  F+  +P  + +FS G         VVA  +  A+   +   MPA S   T  WAFK T  A    L AA +HGLATCPMEGFD  R+R AL IP RY VP+V+++G+ + + +  K   +    E+F   +FG   E I
Sbjct:   33 RYACKAFLPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGAPADFVANMPHVVRLFS-GEG-------VVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHANPDAKPEKPSARLDPTEIFFDGKFGNSSEKI 259          
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: A0A6G0XIZ5_9STRA (Nitroreductase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIZ5_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.120e-44
Identity = 96/236 (40.68%), Postives = 133/236 (56.36%), Query Frame = 1
Query:  214 AEAFERITLARRATKHFDRRGVPEDVLKKVLGLVLRAPSGFNIQPYECIVVTSEEGKQKLSAAMLGPNRERVLEAGATVVFASDLNSMKNVRKLTKMLGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLPLVVAKKISFAVVQRLGKGMPAVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSEEQRDFKTLR---QEVFHKEEFG 912
            A+AF  +   RR+   +  + +P+++L+ VL    RAPSGFN+QPY C+VV   + + +LS AMLG N  +V +A    VFASDL   K V  + +++   G     I ++P+ L  F  G   L  L   +   IS A      + +P  +    W++K+TMLAV   +LA  SHG+ TC MEGFD  RLR AL IP RYSVP+VV+ GYP E  +   TLR    EVF   +FG
Sbjct:    2 AQAFRALARQRRSVYQYQNKPIPKEILEDVLQTTQRAPSGFNLQPYACVVVQDPDERAQLSTAMLGDNIRKVKDAPLVAVFASDLEPSKRVPAIQQLMETAGQSTADIHQLPMKLRFFG-GEGHLAGL---IRSGISAAFTPF--QAVPTYAPTIAWSYKSTMLAVTHYVLALESHGIGTCVMEGFDETRLRHALDIPDRYSVPVVVTAGYPVESTKPL-TLRLDPNEVFFDGKFG 230          
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: A0A4D9DF56_9STRA (Nitroreductase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DF56_9STRA)

HSP 1 Score: 163 bits (412), Expect = 2.330e-44
Identity = 98/254 (38.58%), Postives = 145/254 (57.09%), Query Frame = 1
Query:  220 AFERITLARRATKHFD-RRGVPEDVLKKVLGLVLRAPSGFNIQPYECIVVTSEEGKQKLSAAMLGPNRERVLEAGATVVFASDLNSMKNVRKLTKM-LGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLPLVVAKKISFAVVQRLGKGMPAVSGAETWAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPL-RYSVPIVVSIGY--------PSEEQRDFKTLR---QEVFHKEEFGTPLEGIPSL 939
            AF+R  LAR +TK FD +R + ++ L  +L L LR P+ FN+QPY   +V SE+ KQKL+A MLGPN  RVL+A  T VFA+DL+ ++ V ++  +   + G P+ ++  +P  ++ F  G   L       A K  F       + MP+VS  E W++KNT +A    +L+ + HGL TCPMEGFD RR+   L IP  RY++P+VVS G+        P   +   K+ R   + V  K+++G   +GI  L
Sbjct:   75 AFKRAVLARHSTKAFDAKREIADETLAAILALTLRCPTSFNVQPYTVTIVQSEDMKQKLAACMLGPNSARVLQAPVTAVFAADLDPVQLVPRVQSLERRKRGLPEAYLATLPFSVA-FLAGKGHLAH-----AFKDLFTTAMSPLQPMPSVSTLEAWSYKNTAIAASWYMLSCSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNEEAKKSPRFPPEAVVFKDQYGHAYKGISQL 322          
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Match: A0A3R7NF45_9STRA (Nitroreductase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NF45_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.500e-44
Identity = 96/235 (40.85%), Postives = 127/235 (54.04%), Query Frame = 1
Query:  244 RRATKHFDRRGVPEDVLKKVLGLVLRAPSGFNIQPYECIVVTSEEGKQKLSAAMLGPNRERVLEAGATVVFASDLNSMKNVRKLTKMLGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLPLVVAKKISFAVVQRLGKGMPAVSGAET--WAFKNTMLAVQELLLAATSHGLATCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSEEQRDFKTLRQ----EVFHKEEFGTPLEGI 930
            R A K F    VPE  L+++L L LRAP+GFN QPY C+VV  +  ++KL+ AM+  N  +V EA   VVFA+D    K V +L K+  + G     +  +P  + +FS G         V A  I  A+   +    PA S   T  WAFK T  A   LL AA  HG+ATCPMEGFD  R+R AL IP RY +P+V+++GYP+      K   +    EVF   +FG   EGI
Sbjct:   37 RYACKAFLPDPVPEQTLQEILKLTLRAPTGFNTQPYACVVVRKQADREKLAEAMMASNVRKVKEAPVVVVFAADCEPTKRVPRLQKLAADNGASTDLVNNLPHVVRLFS-GEG-------VAASGIRAAIATAVSPLQPAPSNVSTEAWAFKQTTFAAATLLYAAQEHGVATCPMEGFDQIRVRNALDIPDRYGIPVVIALGYPNPATAPTKPSVRLQPTEVFFDGKFGQSSEGI 263          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1264.2133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT60_ECTSI2.280e-14785.94Nitroreductase-like protein n=1 Tax=Ectocarpus sil... [more]
A0A835Z5B9_9STRA2.280e-7851.90Nitroreductase-like protein n=1 Tax=Tribonema minu... [more]
A0A6H5L6J9_9PHAE1.010e-7489.76Nitroreductase domain-containing protein n=1 Tax=E... [more]
A0A6V1NJ53_HETAK7.880e-5745.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6S8C805_9STRA2.060e-5143.44Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
A0A4D9D236_9STRA1.530e-4539.31Nitroreductase domain-containing protein n=3 Tax=M... [more]
W2YM79_PHYPR9.720e-4539.57Nitroreductase domain-containing protein n=5 Tax=P... [more]
A0A6G0XIZ5_9STRA2.120e-4440.68Nitroreductase domain-containing protein n=1 Tax=A... [more]
A0A4D9DF56_9STRA2.330e-4438.58Nitroreductase domain-containing protein n=2 Tax=M... [more]
A0A3R7NF45_9STRA3.500e-4440.85Nitroreductase domain-containing protein n=3 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1264contigL-elsbetiae_contig1264:22621..26566 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score425.6
Seed ortholog evalue2e-116
Seed eggNOG ortholog2880.D7FT60
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Nitroreductase family
EggNOG OGs2RZ0D@2759,COG0778@1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionnitroreductase-like protein
Ec32 orthologEc-19_003470.1
Exons7
Model size943
Cds size942
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815454.9701457-CDS-L-elsbetiae_contig1264:22620..226741622815454.9701457-CDS-L-elsbetiae_contig1264:22620..22674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 22621..22674 +
1691682906.0838287-CDS-L-elsbetiae_contig1264:22620..226741691682906.0838287-CDS-L-elsbetiae_contig1264:22620..22674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 22621..22674 +
1622815454.985072-CDS-L-elsbetiae_contig1264:23525..237711622815454.985072-CDS-L-elsbetiae_contig1264:23525..23771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 23526..23771 +
1691682906.0953064-CDS-L-elsbetiae_contig1264:23525..237711691682906.0953064-CDS-L-elsbetiae_contig1264:23525..23771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 23526..23771 +
1622815454.9976714-CDS-L-elsbetiae_contig1264:24207..243321622815454.9976714-CDS-L-elsbetiae_contig1264:24207..24332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 24208..24332 +
1691682906.1053421-CDS-L-elsbetiae_contig1264:24207..243321691682906.1053421-CDS-L-elsbetiae_contig1264:24207..24332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 24208..24332 +
1622815455.0079086-CDS-L-elsbetiae_contig1264:24858..249301622815455.0079086-CDS-L-elsbetiae_contig1264:24858..24930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 24859..24930 +
1691682906.115034-CDS-L-elsbetiae_contig1264:24858..249301691682906.115034-CDS-L-elsbetiae_contig1264:24858..24930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 24859..24930 +
1622815455.0176883-CDS-L-elsbetiae_contig1264:25229..254461622815455.0176883-CDS-L-elsbetiae_contig1264:25229..25446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 25230..25446 +
1691682906.12801-CDS-L-elsbetiae_contig1264:25229..254461691682906.12801-CDS-L-elsbetiae_contig1264:25229..25446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 25230..25446 +
1622815455.0271196-CDS-L-elsbetiae_contig1264:25897..260681622815455.0271196-CDS-L-elsbetiae_contig1264:25897..26068Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 25898..26068 +
1691682906.13681-CDS-L-elsbetiae_contig1264:25897..260681691682906.13681-CDS-L-elsbetiae_contig1264:25897..26068Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 25898..26068 +
1622815455.0395358-CDS-L-elsbetiae_contig1264:26509..265661622815455.0395358-CDS-L-elsbetiae_contig1264:26509..26566Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 26510..26566 +
1691682906.1447709-CDS-L-elsbetiae_contig1264:26509..265661691682906.1447709-CDS-L-elsbetiae_contig1264:26509..26566Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1264 26510..26566 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1264.2133.1prot_L-elsbetiae_contig1264.2133.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1264 22621..26566 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1264.2133.1

>prot_L-elsbetiae_contig1264.2133.1 ID=prot_L-elsbetiae_contig1264.2133.1|Name=mRNA_L-elsbetiae_contig1264.2133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=314bp
RRPKHGRPDHDKQGATILASSPGMNLLRAAVLLSLSGVSNSFLRTAVQAP
GSPRAAPQRLQATTPTVVDSDAEAFERITLARRATKHFDRRGVPEDVLKK
VLGLVLRAPSGFNIQPYECIVVTSEEGKQKLSAAMLGPNRERVLEAGATV
VFASDLNSMKNVRKLTKMLGEEGWPKGFIRKVPLYLSVFSTGHNRLFRLP
LVVAKKISFAVVQRLGKGMPAVSGAETWAFKNTMLAVQELLLAATSHGLA
TCPMEGFDMRRLRKALRIPLRYSVPIVVSIGYPSEEQRDFKTLRQEVFHK
EEFGTPLEGIPSL*
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mRNA from alignment at L-elsbetiae_contig1264:22621..26566+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1264.2133.1 ID=mRNA_L-elsbetiae_contig1264.2133.1|Name=mRNA_L-elsbetiae_contig1264.2133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3946bp|location=Sequence derived from alignment at L-elsbetiae_contig1264:22621..26566+ (Laminarionema elsbetiae ELsaHSoW15)
CGCAGACCGAAGCACGGTAGACCGGACCACGACAAGCAAGGGGCTACCAT ACTGGTGAGTGGGCTTGATCTCCTTTCCAACGAAGAACTGCATAACTTCC AACCAGCGGGGCAGTACCATATTTTAGGCACCGCGAGTAGTCTAGTTCCG CCGCGTCATGGTGCTCGGTCATGTAGGTCAGGCAGTACAGCGCGAGCAAA TGCTTATTTTCCCCCATGAGCGACGGGGCGTGTTGATCCCGTTTGGCTAG GATGATGACCATGGGCGGCTGCGATTGGTAACGAGCACAACTTGCCTGTG AGTACATGATAACAACATGATAGTCAACCACACCTCCGCCCTCCGCCTTC TCTGCATCGAGCGGACTGGATGACCAATTCAGATGTTGGCGAGACTTTCT CGCCTATCTTTTGGAGATATTTCAGTGTACTCGACCCGTCTAGCTCTACA GCTGCCACTGCCGTACGGGCTGTCTGGCCTGCACCTGGTGCACACCCTTC CACCTGAACCATTTGCGCAGCAATTTGAATTTGAAAAGAGCCACCTCGGT GCTCGGTGGTACCGGCAATCACATTAACTCGTGATTGGCCCATCCTCACT ATCCCAAACGGTTCATTGGATGCCGTAGACTATGCCCTCCTGCAGCCACG CCGCCTCGCCACTAGCTGTCGTTTTTCTCGCTGTTGGCCTTTGGTTTCCA AGACTCACGGCTCATTCACGTACATACAACGAGAGTGCATGGCTCGCATC TGTGTTCTGCCGGACACTACCGTCTCGCCAACCCTTTCGCTGCCTTCTTC TAGCACACGCTATGGGTAAACAGTAGTCGAGACGATTCGACTACTGTACC GTTCAGTGCTCTAACCGGCAGGCCAACAACTTGGTAAAAAAAAACTGCTC CGCAGGCATCAAGTCCCGGCATGAACCTCCTCAGGGCGGCTGTGCTTCTG TCGCTCTCAGGCGTCTCCAACTCCTTCCTACGGACTGCGGTGCAAGCGCC CGGCAGCCCAAGAGCAGCACCCCAGCGGCTGCAGGCGACGACCCCGACCG TAGTCGATAGCGACGCCGAGGCGTTCGAGAGGATCACCCTTGCCCGCCGT GCGACGAAGCATTTCGACCGGCGCGGTGTGCCAGAAGACGTCCTGAAGAA GGTTGCGCTTCGCCCGCCGCAGGCGCTATCTCTGACAGAGCCAACTTAGC AGTACGCAGGCCGTCACGGTACATAACAAGGATGAAAACCGCCAGTAGTG AACACCATGACGCTCTTGTGGCGTGCTGGCGAGCAAGTGCCCCGCCCCCA TCTTCGTGACGACCTATTCGAGCAAAAATCGAAAACAGTTCGGTGCAAGG CGGCACCTCGTGACTACAGAAGTAGCCCATATGTACCCGGAGTAAATACC CATCAGTAGACACCAGCGCACAACGAAATGCACACAAGACAAACACGTCC TTGGCACGCGGCACGATTGTATGTACGACTCCCCTTCCTCACAGGGCTGT TTGGTTCTTCTGACCCGCTTCGGATGAAGCACGTGAAGCTACACCATCTA TGTAAGTGTCGCCGTGCCGCCTCGCTCCTGTTTTCAGGTTCTGGGATTAG TTTTACGGGCCCCGTCCGGCTTCAACATCCAGCCTTATGAGTGCATCGTC GTCACCTCGGAGGAGGGCAAGCAGAAGCTTAGTGCAGCCATGCTAGGTCC AAACCGCGAAAGGTGAGAAGGCTGAACCTTGCTAGTAGTAAAAGCAGTAA GGCTTGGACGCAGCGAGGATCGCCTCCCTGGTGACAGACGGGGTAACTAC CGTAGGTGACACAAGATACCACACCCCCTGGACAGATTTTCAAAGCTCGA TTCCTCCTCAGCAAGAAGAGTGCCAGTGCCGAAAGAGGCGGCATTGGAAA GATCTAGTCGAGGGCTGTCCGAACATGTGTTGCTTGGTGCTGGCACCTTC TTCGTTGCGGAGTAATGGAGCTCTAACGTTCGGTCCAGGGGGTGTGGTAT CTTGTGTCACCTACGGTAACCGTTCTTCCCAGCTTGGCTATCAGTAGGAG GCACCGCACCCCGGTCTTCGTTGTAGATACCTACACGTTCCTCGGTGATC CAGCGGCTGCGGAAGCCGTTACAAACTGACTACTGTGGAGAACGAACTCC CTGTTGTACGCTGCGGTTTGTTTGTTGCTTCGCGTCTTGATCTCCACATG AACTCGCTGATTTCTGCTGCGTGTCCCCCCTACGCCAGGGTGCTGGAGGC TGGAGCAACGGTGGTGTTCGCCAGCGATTTGAATAGTATGAAGAACGTCC GAAAGCTGACGTGAGTGAACCCGAAAAGCACGCAGCCTTGACCTCGTAAC GTATTTCAAGGGCGTTTCAAAGTTGATGGGTTCACGGAAGAAAAGCACGA GGGAAGCCCACTTTACCCCCACCACAGTCTTGCTCCTCGCGCCACATTTG ACGTGTCACCGGCGACATTTGTTCGGCCGTCGCATCGGCCAGTCACACCA AGCAGTTGTTTAAGGGCCAACTCGACGTTGCGCTTGCAACGTTGCCCTTG CAACGGATTCATCGGATTTTTCCCCACCCCCGTTCCCTGTGATGCCTTGG CCCAACCAGGAAAATGTTGGGAGAAGAGGGCTGGCCGAAAGGTTTCATAC GGAAGGTCCCGCTCTACTTGTCGGTGTTCTCTACGGGGCACAACCGGCTC TTTCGGTTGCCCCTTGTGGTGGCAAAGAAGATATCCTTCGCGGTGGTGCA GCGGCTGGGGAAAGGCATGCCGGCCGTGTCGGGAGCCGAGACGTGGGCCT TCAAGAACACCATGCTGGCCGTGCAGGTATGGGATAGTTTTCTGTTTCCA AGGTGTGTAAGCTGCTCGTTTTCTGTGTCGTTGAGAAGTGTTGTATATCA AACAGGATCGCTGTCGCGGTAGATACGTCGCGGTGGATACGTCTAAATTG TTACGGCAAAGAACGAAAATGCCGTTTTTGTCGTTCTCATCTGGGTCACC TGCGCGACGAAAACTTCCGATTGCTGCCCTGTTGAGACATGATGCGTTCA GCATCTGGCACTCCGAGGGCTATGTATGTAGCGATAGCCTAACTCAACCC GCGCCTTCGGGGCTTTTTTGTTTTGTTTATTTTCTTCCCATTGTTGGCTT ATTCGTCGTGTGCCCCACTGGGCCCCCTTCCTCGACTACGATTAGCTAGA CGACCCAACCGGGGTATTGGTATGTGGATGCTGCTCACTGGTTACACTGC TGTGTGTTCTCCCTGCGCGCACCACAGGAGCTTCTTCTGGCAGCGACGTC TCACGGGCTGGCGACGTGCCCGATGGAAGGGTTCGACATGCGGAGGTTGC GAAAGGCGCTACGTATCCCGTTGCGATATTCGGTTCCGATCGTGGTTAGC ATAGGCTACCCTTCGGAAGAACAACGAGATTTTAAAACACTCAGGCAAGT TGCCACCCTGCATTGAATGTACAGTTTATTGTTGCTACTTCTGCTGCTGT TGTTGTTGTTGGTATCGCTTATAATTGGGTGGAAATAGATGCTCGAATGT CGCTGTCCCAGCTTCCAGGGTCTGGGCAGCCAGCGAACGTTGAACCCACG TTCGAACAACACGCTGAGCGCACTTGGTAGCCGTACGAGCGCCGCTGCCT GTCCGCCGTGCGGACGTGGAAACGCTGCAGACGGCACGCAAACTGCTGAT AGGGAAGATGACGGTACGTAGCTCTCGCGCGCCGCGAGTGCTCTCTTGCT CTCTGTACGCGCTGATCTTGCCATCTTTTGGGACCAATTGATCGTTCACT CTATTTAGCATTGTATACCTCGTCTCGCTCTCTTCTCGTCCATTTTTTCT GTGCGCGGTTCGGAACGAAAAATCAGGTTCTCGCCAGAGGAAGTATTCCA CAAAGAAGAATTCGGCACCCCTCTTGAAGGCATCCCTTCGCTCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1264:22621..26566+

>mRNA_L-elsbetiae_contig1264.2133.1 ID=mRNA_L-elsbetiae_contig1264.2133.1|Name=mRNA_L-elsbetiae_contig1264.2133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1884bp|location=Sequence derived from alignment at L-elsbetiae_contig1264:22621..26566+ (Laminarionema elsbetiae ELsaHSoW15)
CGCAGACCGAAGCACGGTAGACCGGACCACGACAAGCAAGGGGCTACCAT
ACTGCGCAGACCGAAGCACGGTAGACCGGACCACGACAAGCAAGGGGCTA
CCATACTGGCATCAAGTCCCGGCATGAACCTCCTCAGGGCGGCTGTGCTT
CTGTCGCTCTCAGGCGTCTCCAACTCCTTCCTACGGACTGCGGTGCAAGC
GCCCGGCAGCCCAAGAGCAGCACCCCAGCGGCTGCAGGCGACGACCCCGA
CCGTAGTCGATAGCGACGCCGAGGCGTTCGAGAGGATCACCCTTGCCCGC
CGTGCGACGAAGCATTTCGACCGGCGCGGTGTGCCAGAAGACGTCCTGAA
GAAGGCATCAAGTCCCGGCATGAACCTCCTCAGGGCGGCTGTGCTTCTGT
CGCTCTCAGGCGTCTCCAACTCCTTCCTACGGACTGCGGTGCAAGCGCCC
GGCAGCCCAAGAGCAGCACCCCAGCGGCTGCAGGCGACGACCCCGACCGT
AGTCGATAGCGACGCCGAGGCGTTCGAGAGGATCACCCTTGCCCGCCGTG
CGACGAAGCATTTCGACCGGCGCGGTGTGCCAGAAGACGTCCTGAAGAAG
GTTCTGGGATTAGTTTTACGGGCCCCGTCCGGCTTCAACATCCAGCCTTA
TGAGTGCATCGTCGTCACCTCGGAGGAGGGCAAGCAGAAGCTTAGTGCAG
CCATGCTAGGTCCAAACCGCGAAAGGTTCTGGGATTAGTTTTACGGGCCC
CGTCCGGCTTCAACATCCAGCCTTATGAGTGCATCGTCGTCACCTCGGAG
GAGGGCAAGCAGAAGCTTAGTGCAGCCATGCTAGGTCCAAACCGCGAAAG
GGTGCTGGAGGCTGGAGCAACGGTGGTGTTCGCCAGCGATTTGAATAGTA
TGAAGAACGTCCGAAAGCTGACGGTGCTGGAGGCTGGAGCAACGGTGGTG
TTCGCCAGCGATTTGAATAGTATGAAGAACGTCCGAAAGCTGACGAAAAT
GTTGGGAGAAGAGGGCTGGCCGAAAGGTTTCATACGGAAGGTCCCGCTCT
ACTTGTCGGTGTTCTCTACGGGGCACAACCGGCTCTTTCGGTTGCCCCTT
GTGGTGGCAAAGAAGATATCCTTCGCGGTGGTGCAGCGGCTGGGGAAAGG
CATGCCGGCCGTGTCGGGAGCCGAGACGTGGGCCTTCAAGAACACCATGC
TGGCCGTGCAGGAAAATGTTGGGAGAAGAGGGCTGGCCGAAAGGTTTCAT
ACGGAAGGTCCCGCTCTACTTGTCGGTGTTCTCTACGGGGCACAACCGGC
TCTTTCGGTTGCCCCTTGTGGTGGCAAAGAAGATATCCTTCGCGGTGGTG
CAGCGGCTGGGGAAAGGCATGCCGGCCGTGTCGGGAGCCGAGACGTGGGC
CTTCAAGAACACCATGCTGGCCGTGCAGGAGCTTCTTCTGGCAGCGACGT
CTCACGGGCTGGCGACGTGCCCGATGGAAGGGTTCGACATGCGGAGGTTG
CGAAAGGCGCTACGTATCCCGTTGCGATATTCGGTTCCGATCGTGGTTAG
CATAGGCTACCCTTCGGAAGAACAACGAGATTTTAAAACACTCAGGCAAG
AGCTTCTTCTGGCAGCGACGTCTCACGGGCTGGCGACGTGCCCGATGGAA
GGGTTCGACATGCGGAGGTTGCGAAAGGCGCTACGTATCCCGTTGCGATA
TTCGGTTCCGATCGTGGTTAGCATAGGCTACCCTTCGGAAGAACAACGAG
ATTTTAAAACACTCAGGCAAGAAGTATTCCACAAAGAAGAATTCGGCACC
CCTCTTGAAGGCATCCCTTCGCTCTGAGAAGTATTCCACAAAGAAGAATT
CGGCACCCCTCTTGAAGGCATCCCTTCGCTCTGA
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