mRNA_L-elsbetiae_contig12633.2129.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: A0A6H5LAX6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAX6_9PHAE) HSP 1 Score: 193 bits (491), Expect = 1.690e-57 Identity = 97/131 (74.05%), Postives = 112/131 (85.50%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEVGKDRDRDGDGFINPHEL 393 GDYFP++ GTRLFAIFFLPLSTLLLGK I+DYTEM+A++R K+RQTR+LLATVTA EY MD D D RVS +EFM TLI+Q EKVTQEDI EIH RF ALDKD+NGFVTRDE+G++RD+DGDGFI EL Sbjct: 323 GDYFPSSTGTRLFAIFFLPLSTLLLGKVISDYTEMQANKRVKQRQTRLLLATVTAREYSAMDADNDNRVSLMEFMVHTLIKQ-EKVTQEDIEEIHTRFTALDKDHNGFVTRDEIGEERDKDGDGFIGADEL 452
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: A0A7S2LGG0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGG0_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.690e-11 Identity = 33/114 (28.95%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEV 342 GD P +R+FA+FF+P+S L ++ + A ++ + Q I+ + ++ + MD+D DG VS LEF ++ +KV + + +H +F +LD+D NG +++ ++ Sbjct: 324 GDLSPDDAYSRMFAVFFVPMSAFALASVLSKFAAFSAERKIMKTQESIIYRGLRMSDLDMMDKDGDGEVSKLEFF-EFMLLSMDKVDRSFLDRLHSQFESLDQDGNGTLSKSDL 436
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: A0A2G9HMT4_9LAMI (EF-hand domain-containing protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HMT4_9LAMI) HSP 1 Score: 66.6 bits (161), Expect = 2.630e-10 Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEV 342 GD +T G R+FA F++ +ST+ L + E+ +R K +L +T+++ E D D D VS EF+ L ++ K++QEDI + D F LD D +G +T+D++ Sbjct: 230 GDKSFSTSGGRIFAAFWILISTICLAQFFYSLAELYTERRRKSLVNWVLTRKLTSSDLEAADLDNDDAVSAAEFVVYKL-KEMGKISQEDITMVMDSFKVLDVDQSGTLTKDDL 342
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: A0A8K1C5W0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5W0_PYTOL) HSP 1 Score: 65.5 bits (158), Expect = 7.610e-10 Identity = 37/114 (32.46%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEV 342 GD+ P +EG R++AIF+LPLS + + I E ++ ++ +T++ E MD D DG+V+ LE++ L++ K Q DI I +F LDKD +G + ++++ Sbjct: 280 GDFSPKSEGGRIYAIFYLPLSVVSVAHGIGSIIEEIGKRK-------VMKSTISMKELLAMDSDGDGKVTKLEYLSYMLVKLG-KADQSDIDGIIAQFHKLDKDGSGELDKEDL 385
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: A0A835DN67_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DN67_9MAGN) HSP 1 Score: 63.9 bits (154), Expect = 2.390e-9 Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEV 342 GD TE R+FA+F++P ST+ + + E+ R + T IL +T E+E D + DG VS EF+ L ++ +++EDI I D F LD D++G ++ ++ Sbjct: 226 GDKSFTTEAGRVFAVFWIPTSTICVAQLFLYLAELNTESRQRSLVTWILTRRMTLVEFEAADRNHDGVVSADEFIIYKL-KEMGTISEEDITHIMDEFENLDVDHSGTLSATDI 338
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: A0A1S3Y4H6_TOBAC (two pore potassium channel a-like n=9 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Y4H6_TOBAC) HSP 1 Score: 62.8 bits (151), Expect = 6.310e-9 Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEV 342 GD +T+ RLFA F++ LST+ LG+ E+ QR K +L +T ++ + D D D VS EF+ L ++ K+T+EDI+ + + F LD D++G +T ++ Sbjct: 238 GDKSFSTKWGRLFASFWILLSTICLGQLFYSLAELYTEQRRKSMFRWVLTRELTNSDLQAADLDHDSEVSAAEFIVYKL-KELGKITEEDISVVMESFKMLDVDHSGTLTEKDI 350
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: A0A2N9ISZ9_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9ISZ9_FAGSY) HSP 1 Score: 62.4 bits (150), Expect = 8.540e-9 Identity = 38/119 (31.93%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEVGKDRD 357 GD T+G R+FA+F++ LST+ L + + TE+ A R R+L +T + D D D V EF+ L ++ EK+T++DIA + + F LD D + +T ++ +R+ Sbjct: 233 GDKTFKTKGGRVFAVFWILLSTISLAQLLCYITELFAQNRQSELVKRVLSRKMTHVDLGEADLDNDKVVEIAEFILHKL-KEMEKITEDDIALLKEEFKNLDVDKSNSLTAHDINSNRE 350
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: A0A0L0GDX8_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GDX8_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 1.340e-8 Identity = 38/114 (33.33%), Postives = 58/114 (50.88%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEV 342 GD E T++F IFF+ + A ++ + R VT E+MD DKDG+VS LEF+ LI +QEK QEDI E+ F ++D D +G +++ ++ Sbjct: 177 GDLTETHESTKIFNIFFMFFGVISFAIAASNIVGEVVQLQLMHRLKETKAGGVTREMVESMDTDKDGQVSKLEFLIHMLI-EQEKCEQEDIDELLQVFGSIDVDGDGVLSQKDI 289
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: A0A1S3CIN3_CUCME (two-pore potassium channel 1 isoform X2 n=1 Tax=Cucumis melo TaxID=3656 RepID=A0A1S3CIN3_CUCME) HSP 1 Score: 58.9 bits (141), Expect = 1.980e-8 Identity = 36/114 (31.58%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEV 342 GD +T+ R+FAIF++ +ST+ L + E+ +R K +L VT + E D D DG V EF+ L ++ K+T++DI+ + D F LD D +G ++ ++ Sbjct: 20 GDQSFSTKWGRIFAIFWILISTITLAQFFLYIAELNTERRQKSLVKWVLSEKVTDIDLEVADIDDDGVVGAAEFVIYKL-KEMGKITEDDISPVLDEFENLDVDQSGTLSISDI 132
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Match: W9QMY7_9ROSA (Calcium-activated outward-rectifying potassium channel 1 n=2 Tax=Morus notabilis TaxID=981085 RepID=W9QMY7_9ROSA) HSP 1 Score: 61.2 bits (147), Expect = 2.180e-8 Identity = 36/114 (31.58%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 1 GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLATVTAAEYETMDEDKDGRVSPLEFMCRTLIRQQEKVTQEDIAEIHDRFAALDKDNNGFVTRDEV 342 GD +T+G R+FA+F++ +ST+ L + E+ R + +L VT + E D D DG V EF+ L ++ K+TQ+DI+ I + F LD D +G ++ ++ Sbjct: 232 GDKSFSTKGGRVFAVFWILISTICLAQFFLYIAELNTENRQRELVEWVLTRKVTNLDLEAADLDHDGNVEAAEFVLYKL-KEMGKITQDDISLIMEEFDDLDVDQSGSLSASDI 344 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12633.2129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12633.2129.1 >prot_L-elsbetiae_contig12633.2129.1 ID=prot_L-elsbetiae_contig12633.2129.1|Name=mRNA_L-elsbetiae_contig12633.2129.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=132bp GDYFPATEGTRLFAIFFLPLSTLLLGKAITDYTEMKASQRTKRRQTRILLback to top mRNA from alignment at L-elsbetiae_contig12633:98..2706+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12633.2129.1 ID=mRNA_L-elsbetiae_contig12633.2129.1|Name=mRNA_L-elsbetiae_contig12633.2129.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2609bp|location=Sequence derived from alignment at L-elsbetiae_contig12633:98..2706+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12633:98..2706+ >mRNA_L-elsbetiae_contig12633.2129.1 ID=mRNA_L-elsbetiae_contig12633.2129.1|Name=mRNA_L-elsbetiae_contig12633.2129.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=792bp|location=Sequence derived from alignment at L-elsbetiae_contig12633:98..2706+ (Laminarionema elsbetiae ELsaHSoW15)back to top |