mRNA_L-elsbetiae_contig1263.2126.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: D8LCC9_ECTSI (DUF547 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC9_ECTSI) HSP 1 Score: 419 bits (1077), Expect = 2.890e-145 Identity = 201/302 (66.56%), Postives = 249/302 (82.45%), Query Frame = 1 Query: 1 MVPLLTLGRAGFIGRIAVLATGGLLTL-GTPAPKTLCSQM---TTPDYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLETAATSGIGKEAEYALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYMPDDIQKYVSEKKSTLKIEYFDYDWGVNGISPGKPGK 894 M+ L+T RA F+GR+A LA G L++ T +PK C++M + PDY AWD++V+AHV+ S++RGI +NVVDYQ +R +P F FV+SL+ A TSG+GK+AEYALWIN+YNALAIKMV+DNP KK F +T +I SIKD+G+VV+PVWKKPAG VGGE L+LDD+EN KLR P YPADPLLHACIVCASVSCPDVA+TAY+PETLQADMEANMRLFL NP KGL+L++ KGVI LSK+FQWF DFT K+GK SVLD+LLPYMP+D++ YVSE K +LK+++F+YDWGVNG SPG PGK Sbjct: 1 MIALIT--RAHFVGRVAALAAAGALSVTSTSSPKHPCAEMAGSSAPDYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAEYALWINTYNALAIKMVTDNPCKKRLF--RTKRITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLTNPKKGLSLDKAKGVIKLSKIFQWFEGDFTTKIGKDSVLDALLPYMPEDVRTYVSENKGSLKVDHFEYDWGVNGSSPGAPGK 298
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: A0A845JWW4_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A845JWW4_9BACT) HSP 1 Score: 182 bits (462), Expect = 1.160e-52 Identity = 97/248 (39.11%), Postives = 148/248 (59.68%), Query Frame = 1 Query: 127 DYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLETAATSGIG-KEAEYALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYMPDDIQKYVSEKKSTLKIEYFDYDWGVN 867 D+ WDALV+ HVRP + GI +N VDY++++ +PGF + L +A + + K+ + WIN+YN A KMV+D+ I SIKD G++ S VWKKPAG VGG+ +L++IE+ LR +P +H IVCASVSCPD+ + AYR + L ++ M+ FL++ KG+ + + LS +F+WF +DF + G VL + Y+ +I K + ++S +KI Y DY+WG+N Sbjct: 38 DFSGWDALVKKHVRPKTVDGILINAVDYKSLKDDPGFNNLIAGLNSARLNSLKTKQDKLVFWINTYNIFAAKMVTDH-----------YPIKSIKDAGSLFSRVWKKPAGLVGGKERTLNEIEHEILRKMD----EPRIHVAIVCASVSCPDLRLEAYRVDRLNEQLDDQMKKFLKSSKKGMRIEGRGNRVYLSAIFKWFEEDFESRGG---VLKFIGNYVSPEIAKEL--RRSGIKISYLDYNWGLN 265
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: A0A350UX17_9BACT (DUF547 domain-containing protein n=2 Tax=Nitrospinae TaxID=1293497 RepID=A0A350UX17_9BACT) HSP 1 Score: 179 bits (455), Expect = 5.540e-52 Identity = 99/253 (39.13%), Postives = 145/253 (57.31%), Query Frame = 1 Query: 124 PDYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLETAATSGIGK-EAEYALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYM-PDDIQKYVSEKKSTLKIEYFDYDWGVNGIS 876 PD+ WDAL++ +V P + G+ +N V+Y ++ +P F+ V L++ + + + K E + A WIN YN A+KMV+DN + SIKDVG++ VWK+ AG VGG+ +L+ IE+ LR +P +H IVCASVSCPD+A Y+ + L ++ MR FL NP KG+ + + LSK+F WF DDF + G VL + Y+ P D Q S+L++ Y DY+WGVNG S Sbjct: 5 PDFADWDALLKKYVAPETIDGVRLNAVNYGKLKTDPAFSRLVNGLKSFSPAQLKKHEEKLAFWINVYNVFAVKMVTDN-----------YPLESIKDVGSLFKSVWKRNAGIVGGKDYTLNAIEHKILRKMN----EPRIHVAIVCASVSCPDLATDVYKADRLSEQLDVQMRKFLANPGKGMRVGTEGKKVFLSKIFDWFEDDFEPRGG---VLKFIRLYVSPKDRQAL---DNSSLRVSYMDYNWGVNGSS 236
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: A0A7T0G4N3_9BACT (DUF547 domain-containing protein n=1 Tax=Candidatus Nitrohelix vancouverensis TaxID=2705534 RepID=A0A7T0G4N3_9BACT) HSP 1 Score: 179 bits (455), Expect = 1.030e-51 Identity = 93/248 (37.50%), Postives = 144/248 (58.06%), Query Frame = 1 Query: 127 DYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLETAATSGIGK-EAEYALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYMPDDIQKYVSEKKSTLKIEYFDYDWGVN 867 D+ WD +++ V+P +RGI + VDY ++ + F + L+TA S I + + A WIN YN LA+KM+ D+ + SI+D+G++ VW +PAG VGG+ +L+D+E+ LR +P +H IVCASVSCPD+AM AY E+L +E LFL N KGL ++R + I +S +F+WF +DF K G + + + Y+P + ++++K + I+Y DYDWGVN Sbjct: 29 DFSDWDQILKQRVKPGSIRGISLYTVDYGGLKGDEKFEQLLSRLKTANLSSIKQGDPALAFWINVYNILAVKMIVDHHP-----------LDSIRDIGSIFKSVWNRPAGIVGGKEYTLNDVEHEILRKM----GEPRIHVAIVCASVSCPDLAMEAYTAESLNQQLERQTALFLGNEKKGLKIDRKQRKIYVSSIFKWFEEDFDAKGGVRAFIGA---YLPPKERSFINQKD--VSIDYLDYDWGVN 256
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: A0A3D2UXT1_9BACT (DUF547 domain-containing protein n=3 Tax=Nitrospinaceae TaxID=407032 RepID=A0A3D2UXT1_9BACT) HSP 1 Score: 179 bits (455), Expect = 1.030e-51 Identity = 96/258 (37.21%), Postives = 146/258 (56.59%), Query Frame = 1 Query: 100 TLCSQMTTPDYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLETAATSGI-GKEAEYALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYMPDDIQKYVSEKKSTLKIEYFDYDWGVNG 870 + CS D+ W ALV +V P L G+ N +DY +++ +P F+ V LE+ + + + +E++ + WIN YN LA KM++D+ I SIKDVG+ PVWK+ AGTVGG+ +L+DIE+ LR +P +H IVCASVSCPD+ Y L ++ M FL +P KG+ L+ K + LS +F+WF++DF + G VL + Y+ + +K ++ K +KI Y DY+W +NG Sbjct: 20 SFCSNSEAFDFSDWGALVNKYVAPKTLAGVRFNAIDYASLKKDPVFSGLVARLESYSLASLESRESKLSFWINVYNILAAKMITDH-----------YPIKSIKDVGSFFKPVWKRVAGTVGGKERTLNDIEHEILRKMN----EPRIHVAIVCASVSCPDLRQEVYSAGKLNKQLDDQMEKFLRSPGKGMKLDERKNRVYLSSIFKWFAEDFASRGG---VLKYIGQYVTAEERKVLNNSK--IKISYLDYNWEING 257
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: UPI001F18B1F0 (DUF547 domain-containing protein n=1 Tax=Nitrospina gracilis TaxID=35801 RepID=UPI001F18B1F0) HSP 1 Score: 178 bits (452), Expect = 1.760e-51 Identity = 97/250 (38.80%), Postives = 142/250 (56.80%), Query Frame = 1 Query: 127 DYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLETAATSGIG-KEAEYALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYMPDDIQKYVSEKKSTLKIEYFDYDWGVNGI 873 DY AWDAL++ HV P+ L G+ +N Y+A++ +P FA V+ E + + +E + A WIN+YN A+KMV D+ + SIKD G + VWKK GT+GG+ ++LD+IE+ LR +P +H IVCASVSCPD+ AY P+ L+ + FL NP KGL +++ + I LS +F WF +DF K G V L PY+P+ + + K S IEY +Y+W +N + Sbjct: 12 DYSAWDALLKKHVLPTTLDGVRLNAFPYKALKNDPAFAKVVQQFEGHSPDALKTREEKLAFWINAYNVFAVKMVLDH-----------YPVDSIKDAGGLFGSVWKKQVGTIGGQPVTLDEIEHGILRKM----GEPRIHMAIVCASVSCPDIRKEAYWPDRLEQQLTDQAEHFLMNPGKGLRVDKERKTIYLSSIFDWFKEDFEAKGG---VRAYLAPYVPE--RHRAALKDSGYDIEYMNYNWKLNTL 241
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: A0A523N030_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A523N030_9BACT) HSP 1 Score: 179 bits (454), Expect = 2.310e-51 Identity = 98/249 (39.36%), Postives = 141/249 (56.63%), Query Frame = 1 Query: 127 DYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLET--AATSGIGKEAEYALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYMPDDIQKYVSEKKSTLKIEYFDYDWGVN 867 D+ WD L++ HV P+ + G+ + VDY ++ +P ++ + L+T AT KE + A WIN YN +A+KMV+D+ + SIKD G + VWKK AG VGG+ ++L +IE+ LR DP +H IVCASVSCPD+ AY E L ++ ++ FL NP KGL ++R +G+ITLSK+F WF DDF K G VL L Y P+ + + K + Y DY+W +N Sbjct: 45 DFSGWDGLLKRHVGPATIAGVRLAGVDYPGVKKDPAYSKLIGELKTFSPATLNTLKE-KLAFWINVYNIMAVKMVADH-----------YPVDSIKDAGNLFGSVWKKTAGVVGGKEVTLHEIEHEILRKM----GDPRIHIAIVCASVSCPDLRKEAYTKERLDQQLDDQLQRFLANPGKGLKVDRARGLITLSKIFDWFEDDFETKGG---VLPFLARYAPEPDRSLL--KNGDADVSYLDYNWDLN 272
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: A0A381P1U0_9ZZZZ (DUF547 domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381P1U0_9ZZZZ) HSP 1 Score: 179 bits (453), Expect = 2.660e-51 Identity = 91/248 (36.69%), Postives = 147/248 (59.27%), Query Frame = 1 Query: 127 DYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLETAATSGI-GKEAEYALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYMPDDIQKYVSEKKSTLKIEYFDYDWGVN 867 D+ W+AL++ HVRP ++ GI +N VDY+ ++ E GF + L + + +E + WIN+YN A KMV+D+ I SIKD+G+ PVW+KPAG VGG+ +L++IE+ LR +P +H IVCASVSCPD+ + A+ +L ++ M++FL++ KG+ ++ + + LS +F+WF DDF + G VL + Y+ D+ K ++ +S +KI Y +Y+WG+N Sbjct: 39 DFSDWEALIKKHVRPKKVDGILINAVDYKNLKNELGFTKLLARLNSVRMGSLKSREEKLVFWINTYNIFAAKMVADH-----------FPIKSIKDLGSFFRPVWEKPAGNVGGKERTLNEIEHEILRKMN----EPRVHVAIVCASVSCPDLRLEAFNVNSLNEQLDDQMKVFLKSSEKGMKIDNKRNRVYLSSIFKWFEDDFESRGG---VLQFIANYVSPDVAKKLT--RSGIKIYYLEYNWGIN 266
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: A0A2H0MVD3_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_45_15 TaxID=1974048 RepID=A0A2H0MVD3_9BACT) HSP 1 Score: 178 bits (452), Expect = 3.870e-51 Identity = 95/248 (38.31%), Postives = 146/248 (58.87%), Query Frame = 1 Query: 127 DYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLETAATSGIGKEAEY-ALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYMPDDIQKYVSEKKSTLKIEYFDYDWGVN 867 D+ WD++++ +V +R I +NV+DY+ ++ ++ LE S + K E A WIN YN LA+KMV D+ + SIKD+G++ VWK+PAG V GE +L+DIE+ LR +P +HA IVCASVSCPD++ T + PETL A ++ M++F+ N KGL ++R + LS +F+WF++DF K G VL + Y+ + K+++ + +I YFDYDWG+N Sbjct: 39 DFSEWDSILKENVSTKIIREIPLNVLDYKKLKYNSQLKNLLQRLENTDISNLKKREEVLAFWINVYNILAVKMVLDH-----------YPVKSIKDIGSIFRSVWKRPAGKVAGEERTLNDIEHEILRKM----GEPRIHAAIVCASVSCPDLSKTVFVPETLDAQLDWQMKVFVHNSAKGLVIDREGKRVQLSAIFKWFAEDFKSKGG---VLSFVGAYLSPEDNKFIN--RPDTEISYFDYDWGLN 266
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Match: A0A2H0MJZ5_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8 TaxID=1974049 RepID=A0A2H0MJZ5_9BACT) HSP 1 Score: 178 bits (451), Expect = 6.670e-51 Identity = 95/248 (38.31%), Postives = 145/248 (58.47%), Query Frame = 1 Query: 127 DYDAWDALVRAHVRPSQLRGIGVNVVDYQAIRAEPGFAAFVKSLETAATSGI-GKEAEYALWINSYNALAIKMVSDNPTKKICFGLKTVKIASIKDVGTVVSPVWKKPAGTVGGEVLSLDDIENTKLRAPTGYPADPLLHACIVCASVSCPDVAMTAYRPETLQADMEANMRLFLENPTKGLALNRTKGVITLSKVFQWFSDDFTKKVGKASVLDSLLPYMPDDIQKYVSEKKSTLKIEYFDYDWGVN 867 D+ WD +++ +V L G+ ++ VDY+ ++A+P F+ V+ L++A + + +E + A WIN YN LA+KM+ DN + SIKD G++ SPVW KPAG V G +L ++E+ LR +P +H IVCASVSCPD+A AY PE L ++ MR FL P KG+ L+ + LS +F+WF DDF K G VL L PY+ + +K +++ + +++ Y DY+W VN Sbjct: 46 DFTDWDGMLKRYVSERTLDGVRLSAVDYRKVKADPAFSHLVERLKSADVAQLKSREDKLAFWINVYNILAVKMILDN-----------YPLQSIKDAGSLFSPVWDKPAGEVAGVGRTLAEVEHGILRKM----GEPRIHVAIVCASVSCPDLAREAYLPEKLGDQLDRQMRAFLREPGKGMRLDAAGRRVFLSSIFKWFEDDFEAKGG---VLPFLRPYVSPEERKLLNDPE--IRVSYLDYNWNVN 273 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1263.2126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1263.2126.1 >prot_L-elsbetiae_contig1263.2126.1 ID=prot_L-elsbetiae_contig1263.2126.1|Name=mRNA_L-elsbetiae_contig1263.2126.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=299bp MVPLLTLGRAGFIGRIAVLATGGLLTLGTPAPKTLCSQMTTPDYDAWDALback to top mRNA from alignment at L-elsbetiae_contig1263:2217..6376+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1263.2126.1 ID=mRNA_L-elsbetiae_contig1263.2126.1|Name=mRNA_L-elsbetiae_contig1263.2126.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4160bp|location=Sequence derived from alignment at L-elsbetiae_contig1263:2217..6376+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1263:2217..6376+ >mRNA_L-elsbetiae_contig1263.2126.1 ID=mRNA_L-elsbetiae_contig1263.2126.1|Name=mRNA_L-elsbetiae_contig1263.2126.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1794bp|location=Sequence derived from alignment at L-elsbetiae_contig1263:2217..6376+ (Laminarionema elsbetiae ELsaHSoW15)back to top |