mRNA_L-elsbetiae_contig12627.2123.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: L9U5D6_9GAMM (Uncharacterized protein n=1 Tax=Halomonas titanicae BH1 TaxID=1204738 RepID=L9U5D6_9GAMM) HSP 1 Score: 332 bits (852), Expect = 3.390e-110 Identity = 159/163 (97.55%), Postives = 160/163 (98.16%), Query Frame = 2 Query: 17 VPNTAVDVNSWAVSACYPRSTFYPLSDGPSIQNHRITRTCFRTCSTCLSRSQAPLCSCTHCTMSDRAEGTFVLLRYSLGGDRPSQTTHHTLSSIRITDLSENANDARLVFQGWLRPNWRPSFKASQLSYTGNISVQCEAIVKVHGVFPSSRGYTASSRRFQFH 505 +PNTAVDVNSWAVSACYPRSTFYPLSDGPSIQNHRITRTCFRTCSTCLSRSQAPLCSCT CTMSDRAEGTFVLLRYSLGGDRPSQTTHHTLSSIRITDLSENANDARLVFQGWL PNWRP FKASQLSYTGNISVQCEAIVKVHGVFPSSRGYTASSRRFQFH Sbjct: 1 MPNTAVDVNSWAVSACYPRSTFYPLSDGPSIQNHRITRTCFRTCSTCLSRSQAPLCSCTQCTMSDRAEGTFVLLRYSLGGDRPSQTTHHTLSSIRITDLSENANDARLVFQGWLPPNWRPEFKASQLSYTGNISVQCEAIVKVHGVFPSSRGYTASSRRFQFH 163
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: A0A182EY77_ONCOC (Uncharacterized protein n=2 Tax=Onchocerca ochengi TaxID=42157 RepID=A0A182EY77_ONCOC) HSP 1 Score: 232 bits (591), Expect = 4.480e-70 Identity = 133/220 (60.45%), Postives = 141/220 (64.09%), Query Frame = 1 Query: 1 MSRHRGAKHRRRCELLGGISLLSPEYLLSVERWPFHTEPPDH*NLLSHLLDVSVSQSSTLMLLHSLHDVRPC*GYLRAPPLLFRRRPPQSNYPPHTVLDPDNGPE*ERQ*CQAGISRLAPPELASEFQSLPAILHRQHQRPV*SYSKGSRGLSV*PRVHRIFTAISISLSLGWRQRGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFNQELRLAANTI 660 MSRHRGAKHRRR ELLGG++ LRAPPLLFRRRPPQSNYPP TV +PD GP E Q + GISR+AP LAS QSLP ILH + Q V SYSKGSRGLSV PRVH IFTAISISLSLGWRQ GHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGF+QELR+AAN I Sbjct: 57 MSRHRGAKHRRRYELLGGLA------------------------------------------------------NLRAPPLLFRRRPPQSNYPPDTVRNPDYGPTLEHQPLKGGISRMAPRRLASTLQSLPPILHIKDQCSVSSYSKGSRGLSVLPRVHCIFTAISISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFDQELRVAANPI 222
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: B2PU91_PROST (Uncharacterized protein n=2 Tax=Providencia TaxID=586 RepID=B2PU91_PROST) HSP 1 Score: 219 bits (559), Expect = 8.630e-66 Identity = 121/176 (68.75%), Postives = 127/176 (72.16%), Query Frame = 1 Query: 133 LLSHLLDVSVSQSSTLMLLHSLHDVRPC*GYLRAPPLLFRRRPPQSNYPPHTVLDPDNGPE*ERQ*CQAGISRLAPPELASEFQSLPAILHRQHQRPV*SYSKGSRGLSV*PRVHRIFTAISISLSLGWRQRGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFNQELRLAANTI 660 LLS+ + L L + HDVRPC LRAPPL F RRPPQSNYPP TV PD G E Q + GISRLAP LAS QSLP ILH + Q V SYSKGSRGLSV PRVH IFTA SISLSLGWRQ GHHYAIRAGRNLPDKEFRYLRTVIVTAAVY GF+QEL L N I Sbjct: 13 LLSYCSSRHSRSQAGLCLCTNPHDVRPCLANLRAPPLRFGRRPPQSNYPPDTVRTPDYGATLEHQTLKGGISRLAPCRLASTLQSLPPILHIKAQCSVSSYSKGSRGLSVLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYWGFDQELLLTDNPI 188
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: A0A8H2LVE7_BURPE (Cell wall-associated hydrolase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A8H2LVE7_BURPE) HSP 1 Score: 221 bits (563), Expect = 9.430e-66 Identity = 116/154 (75.32%), Postives = 121/154 (78.57%), Query Frame = 1 Query: 1 MSRHRGAKHRRRCELLGGISLLSPEYLLSVERWPFHTEPPDH*NLLSHLLDVSVSQSSTLMLLHSLHDVRPC*GYLRAPPLLFRRRPPQSNYPPHTVLDPDNGPE*ERQ*CQAGISRLAPPELASEFQSLPAILHRQHQRPV*SYSKGSRGLSV 462 MSRHRGAKHRRR ELLGGISLLSPEYLLSVERWPFHTEPPDH +LLSHLLD+SVSQ STLM LH HD RP YLR PPL F RRPPQSN P TV DPD+GP E Q Q GISR APP+LA F SLP ILHR Q P+ SYSKGS GLSV Sbjct: 81 MSRHRGAKHRRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQLSTLMPLHYQHDFRPYLAYLRTPPLRFGRRPPQSNCLPCTVPDPDHGPRLEPQTNQGGISRTAPPKLAFRFHSLPPILHRSVQSPMQSYSKGSWGLSV 234
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: A0A8D8MY37_CULPI (Uncharacterized protein ORF91 n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8MY37_CULPI) HSP 1 Score: 212 bits (539), Expect = 1.060e-62 Identity = 113/153 (73.86%), Postives = 117/153 (76.47%), Query Frame = 1 Query: 181 MLLHSLHDVRPC*GYLRAPPLLFRRRPPQSNYPPHTVLDPDNGPE*ERQ*CQAGISRLAPPELASEFQSLPAILHRQHQRPV*SYSKGSRGLSV*PRVHRIFTAISISLSLGWRQRGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFNQEL 639 M L+ D RP YLR PPLLFRRRPPQSNYPP TV +PD G E Q + GISR AP LAS QSLP ILH + Q V SYSKGSRGLSV PRVH IFTA SISLSLGWRQ GHHYAIRAGRNLPDKEFRYLRTVIVTAAVY GFN EL Sbjct: 1 MPLYYQADFRPALAYLRTPPLLFRRRPPQSNYPPDTVRNPDYGSTLEHQTLKGGISRSAPCRLASTLQSLPPILHIKAQCSVSSYSKGSRGLSVLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYWGFNSEL 153
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: A0A0H2Z536_ECOK1 (Uncharacterized protein n=1 Tax=Escherichia coli O1:K1 / APEC TaxID=405955 RepID=A0A0H2Z536_ECOK1) HSP 1 Score: 211 bits (536), Expect = 5.610e-62 Identity = 113/146 (77.40%), Postives = 117/146 (80.14%), Query Frame = 1 Query: 226 LRAPPLLFRRRPPQSNYPPHTVLDPD-NGPE*ERQ*CQAGISRLAPPELASEFQSLPAILHRQHQRPV*SYSKGSRGLSV*PRVHRIFTAISISLSLGWRQRGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFNQELRLAANTI 660 LRAPPLLFRRRPPQSNYPP TV P GP E Q + GISR AP LAS QSLP ILH + Q V SYSKGSRGLSV PRVH IFTA SISLSLGWRQ GHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGF+QELR+ AN I Sbjct: 71 LRAPPLLFRRRPPQSNYPPDTVRKPGITGPTLEHQTLKGGISRSAPCRLASTLQSLPPILHIKAQCSVSSYSKGSRGLSVLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFDQELRVTANPI 216
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: A0A6A5L145_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L145_LUPAL) HSP 1 Score: 201 bits (511), Expect = 2.350e-58 Identity = 136/313 (43.45%), Postives = 154/313 (49.20%), Query Frame = 2 Query: 38 VNSWAVSACYPRSTFYPLSDGPSIQNHRITRTCFRTCSTCLSRSQAPLCSCTHCTMSDRAEGTFVLLRYSLGGDRPSQTTHHTLSSIRITDLSENANDARLVFQGWLRPNWRPSFKASQLSYTGNISVQCEAIVKVHGVFPSSRGYTASSRRFQFH*VSGGDSVAIITPFVQVGTYPTRNFATLGPL*LRPPFTGASIKSFALRLTPSFNLPAPGRRHTLYVRLRVSRVLCF**TVAATWYLRPVRARRASLFTLRRRAFSRSYGTILPSSFTRVLSSALGFSP*PPVSVWGTVAHDLKLRGFSWKRGISDFL 976 +NSWAVSACYPRSTFYPLSDGPSIQNHRIT+T FRTCSTCLSRSQA C T +SDR+E TFVLLRYSLGGDRPSQT HHTLSSIR+TD + + + + GW + R + +A YT VF + S+R P RH L ++ L P RR FSRSYG ILPSSFTRVLSSAL FS PPVSVWGTV LKLR FSWK GI+ F+ Sbjct: 1 MNSWAVSACYPRSTFYPLSDGPSIQNHRITKTYFRTCSTCLSRSQARFCLYTLRPISDRSERTFVLLRYSLGGDRPSQTAHHTLSSIRMTDQTISIS----LSLGWRQRRHRYAIRAGVTPYTSTF------------VFAECCVFNKQSQR-----------------------------------------------------------PGIFDRHGLTEQV-----------------LHP-----------HRRTFSRSYGAILPSSFTRVLSSALVFSTQPPVSVWGTVPSYLKLRSFSWKHGINHFI 210
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: A0A388PTV7_9PROT (Uncharacterized protein n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A388PTV7_9PROT) HSP 1 Score: 195 bits (496), Expect = 4.220e-57 Identity = 102/142 (71.83%), Postives = 111/142 (78.17%), Query Frame = 1 Query: 1 MSRHRGAKHRRRCELLGGISLLSPEYLLSVERWPFHTEPPDH*NLLSHLLDVSVSQSSTLMLLHSLHDVRPC*GYLRAPPLLFRRRPPQSNYPPHTVLDPDNGPE*ERQ*CQAGISRLAPPELASEFQSLPAILHRQHQRPV 426 MSRHRGAK RR ELLGGISLLSPEYLLSVERWPFHTEPPDH +LLSHLLD+SVSQSS LM LH +D RP GYLR PPLLF RRPPQSN PP+TV +P +G E Q Q GISRLAP +LA+ Q LP ILHR Q P+ Sbjct: 1 MSRHRGAKLPRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQSSNLMPLHYQYDFRPYLGYLRTPPLLFGRRPPQSNCPPYTVPNPVSGSRLEPQQHQGGISRLAPHDLATTLQCLPPILHRSCQSPM 142
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: A0A6B2E5S5_9DIPT (Putative cell wall-associated hydrolase (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2E5S5_9DIPT) HSP 1 Score: 194 bits (492), Expect = 4.800e-56 Identity = 99/120 (82.50%), Postives = 102/120 (85.00%), Query Frame = 1 Query: 1 MSRHRGAKHRRRCELLGGISLLSPEYLLSVERWPFHTEPPDH*NLLSHLLDVSVSQSSTLMLLHSLHDVRPC*GYLRAPPLLFRRRPPQSNYPPHTVLDPDNGPE*ERQ*CQAGISRLAP 360 MSRHRGAKHRRRCELLGGISLLSPEYLLSVERWPFHTEPPDH LLSHLLD+SVSQSSTLM LH +DVRP YLRAPPLLFRRRPPQSN PP TV DPDNG E Q Q GISR+AP Sbjct: 56 MSRHRGAKHRRRCELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSHLLDLSVSQSSTLMPLHYQYDVRPYLAYLRAPPLLFRRRPPQSNCPPCTVPDPDNGSRLEPQTDQGGISRMAP 175
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Match: A0A0H2YW97_ECOK1 (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0H2YW97_ECOK1) HSP 1 Score: 194 bits (492), Expect = 7.060e-56 Identity = 118/184 (64.13%), Postives = 126/184 (68.48%), Query Frame = 1 Query: 121 DH*NLLSHLLDVSVSQS--------STLMLLHSLHDVRPC*GYLRAPPLLF-RRRPPQSNYPPHTVLDPDNGPE*ERQ*CQAGISRLAPPELASEFQSLPAILHRQHQRPV*SYSKGSRGLSV*PRVHRIFTAISISLSLGWRQRGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFNQELRL 645 +H +LLSHLL S SQS + LM SL + LRAPPLLF P PP TV +PD G E Q + GISR AP LAS QSLP ILH + Q V SYSKGSRGLSV PRVH IFTA SISLSLGWRQ GHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGF+QELRL Sbjct: 10 NHYDLLSHLLAPSRSQSKLAYAIGTNLLMSDKSLAN-------LRAPPLLFXEENAPVKTTPPDTVRNPDYGSTLEHQTLKGGISRSAPCRLASTLQSLPPILHIKAQCSVSSYSKGSRGLSVLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFDQELRL 186 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12627.2123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12627.2123.1 >prot_L-elsbetiae_contig12627.2123.1 ID=prot_L-elsbetiae_contig12627.2123.1|Name=mRNA_L-elsbetiae_contig12627.2123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=43bp MSRHRGAKHRRRCELLGGISLLSPEYLLSVERWPFHTEPPDH*back to top mRNA from alignment at L-elsbetiae_contig12627:3918..5410- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12627.2123.1 ID=mRNA_L-elsbetiae_contig12627.2123.1|Name=mRNA_L-elsbetiae_contig12627.2123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1493bp|location=Sequence derived from alignment at L-elsbetiae_contig12627:3918..5410- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12627:3918..5410- >mRNA_L-elsbetiae_contig12627.2123.1 ID=mRNA_L-elsbetiae_contig12627.2123.1|Name=mRNA_L-elsbetiae_contig12627.2123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=258bp|location=Sequence derived from alignment at L-elsbetiae_contig12627:3918..5410- (Laminarionema elsbetiae ELsaHSoW15)back to top |