mRNA_L-elsbetiae_contig12627.2120.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: A0A0R3R948_9BILA (Uncharacterized protein n=1 Tax=Brugia timori TaxID=42155 RepID=A0A0R3R948_9BILA) HSP 1 Score: 149 bits (376), Expect = 1.350e-44 Identity = 82/110 (74.55%), Postives = 87/110 (79.09%), Query Frame = 1 Query: 1 MQREEPYLPLTSTEAGRDSGVPSGTRNPCPYLPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRYKGLRARESQRIP*SRSQSGSESATRLREVGIASNRES 330 MQREEPYL LT E RD VPSGTR LPARNGGNSKETAGDKPEEGGDDVKSSWPLR GLHT YNGR +GL+A + + IP + SQSG ESATRL EVGIASNR S Sbjct: 1 MQREEPYLALTCRELSRDGLVPSGTRT---QLPARNGGNSKETAGDKPEEGGDDVKSSWPLRPGLHTYYNGRDRGLQAGDGKPIPETLSQSGLESATRLHEVGIASNRRS 107
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: UPI001A17FC58 (Uncharacterized protein n=1 Tax=Moritella sp. F3 TaxID=2718882 RepID=UPI001A17FC58) HSP 1 Score: 116 bits (290), Expect = 5.100e-32 Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 1 Query: 76 RNPCPYLPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRYKGLRARESQRIP 255 RNP PYLPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNG YKGL+ + +RIP Sbjct: 11 RNPYPYLPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGAYKGLQTSDGKRIP 70
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: UPI001BBB0189 (Uncharacterized protein n=2 Tax=Shewanella TaxID=22 RepID=UPI001BBB0189) HSP 1 Score: 112 bits (280), Expect = 1.900e-30 Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 1 Query: 76 RNPCPYLPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRYKGLRARESQRI 252 RNP PYLPARNGGN +ETAGDKPEEGGDDVKSSWPLRVGLHTCYNG+Y+GLR+RE + I Sbjct: 11 RNPYPYLPARNGGNFRETAGDKPEEGGDDVKSSWPLRVGLHTCYNGKYRGLRSREVELI 69
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: A0A2S7V079_9GAMM (Uncharacterized protein n=1 Tax=Psychrosphaera saromensis TaxID=716813 RepID=A0A2S7V079_9GAMM) HSP 1 Score: 112 bits (281), Expect = 2.710e-30 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 2 Query: 116 TLRRLPVTNRRKVGTTSSHHGPYG*GYTRATMAGTKGCELARVSESLKAGLSPDRSLQLDSVKSESLVIVN 328 TLRRLPVTNRRKVGTTSSHHGPY GYTRATMA TKGC+LARVS S KA SPD SLQLDS+KSESLVIV+ Sbjct: 3 TLRRLPVTNRRKVGTTSSHHGPYEMGYTRATMASTKGCKLARVSGSHKACRSPDWSLQLDSMKSESLVIVD 73
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: A0A5K7Y635_9GAMM (Uncharacterized protein n=1 Tax=Cobetia sp. AM6 TaxID=2661553 RepID=A0A5K7Y635_9GAMM) HSP 1 Score: 108 bits (269), Expect = 8.050e-29 Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 1 Query: 76 RNPCPYLPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRYKGLRARESQRIP 255 RNP PYLPA N GNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNG+YKGL+ E + IP Sbjct: 11 RNPYPYLPASNVGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGKYKGLQYCEVEPIP 70
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: A0A2S7V0H2_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Psychrosphaera saromensis TaxID=716813 RepID=A0A2S7V0H2_9GAMM) HSP 1 Score: 107 bits (266), Expect = 2.100e-28 Identity = 56/68 (82.35%), Postives = 59/68 (86.76%), Query Frame = 2 Query: 107 MVGTLRRLPVTNRRKVGTTSSHHGPYG*GYTRATMAGTKGCELARVSESLKAGLSPDRSLQLDSVKSE 310 M+ TLRRLPVTNRRKVGTTSSHHGPY GYTRATMA TKGC+LARVS S KA SPD SLQLDS+KSE Sbjct: 1 MLRTLRRLPVTNRRKVGTTSSHHGPYEMGYTRATMASTKGCKLARVSGSHKACRSPDWSLQLDSMKSE 68
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: A0A0T7DVV3_9VIBR (Uncharacterized protein n=1 Tax=Vibrio coralliirubri TaxID=1516159 RepID=A0A0T7DVV3_9VIBR) HSP 1 Score: 105 bits (263), Expect = 7.360e-28 Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 1 Query: 76 RNPCPYLPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRYKGLRARESQRIP 255 RNP P LPA N GNS+ETAGDKPEEGGDDVKSSWPLRVGLHTCYNG Y+G +A +S+RIP Sbjct: 11 RNPYPCLPASNVGNSRETAGDKPEEGGDDVKSSWPLRVGLHTCYNGAYRGQQASDSERIP 70
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: UPI0019B69310 (Uncharacterized protein n=1 Tax=Saccharospirillum salsuginis TaxID=418750 RepID=UPI0019B69310) HSP 1 Score: 103 bits (256), Expect = 1.040e-26 Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 1 Query: 76 RNPCPYLPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRYKGLRARESQRI 252 RNP PYLPA + G+ KETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRY+ LR+RE++ I Sbjct: 23 RNPYPYLPASDVGDYKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRYRRLRSREAELI 81
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: A0A1I7T9A8_9PELO (Uncharacterized protein n=1 Tax=Caenorhabditis tropicalis TaxID=1561998 RepID=A0A1I7T9A8_9PELO) HSP 1 Score: 102 bits (254), Expect = 2.280e-26 Identity = 57/79 (72.15%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 94 LPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRYKGLRARESQRIP*SRSQSGSESATRLREVGIASNRES 330 LPAR GGNS +TA EEGGDDVKSS PL +GLH CYNGRYKGLR RE +RIP SRSQ G SATR EVG+ASNR S Sbjct: 2 LPARYGGNSWDTAVVNTEEGGDDVKSSCPLCLGLHACYNGRYKGLRYREVERIPKSRSQFGLGSATRPHEVGVASNRRS 80
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Match: A0A6B0USQ1_IXORI (Uncharacterized protein ycf68 (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A6B0USQ1_IXORI) HSP 1 Score: 103 bits (256), Expect = 5.220e-26 Identity = 58/85 (68.24%), Postives = 62/85 (72.94%), Query Frame = 1 Query: 76 RNPCPYLPARNGGNSKETAGDKPEEGGDDVKSSWPLRVGLHTCYNGRYKGLRARESQRIP*SRSQSGSESATRLREVGIASNRES 330 RNP LPAR GG+S ETAG EEGGDDVKSS PL +GLH CYNGRY GLR E + IP SRSQ G SATR EVG+ASNR S Sbjct: 50 RNPRSMLPARGGGDSWETAGVNSEEGGDDVKSSCPLCLGLHACYNGRYNGLRYCEVELIPKSRSQFGLGSATRPHEVGVASNRRS 134 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12627.2120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12627.2120.1 >prot_L-elsbetiae_contig12627.2120.1 ID=prot_L-elsbetiae_contig12627.2120.1|Name=mRNA_L-elsbetiae_contig12627.2120.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp MQREEPYLPLTSTEAGRDSGVPSGTRNPCPYLPARNGGNSKETAGDKPEEback to top mRNA from alignment at L-elsbetiae_contig12627:1465..1862+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12627.2120.1 ID=mRNA_L-elsbetiae_contig12627.2120.1|Name=mRNA_L-elsbetiae_contig12627.2120.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=398bp|location=Sequence derived from alignment at L-elsbetiae_contig12627:1465..1862+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12627:1465..1862+ >mRNA_L-elsbetiae_contig12627.2120.1 ID=mRNA_L-elsbetiae_contig12627.2120.1|Name=mRNA_L-elsbetiae_contig12627.2120.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=516bp|location=Sequence derived from alignment at L-elsbetiae_contig12627:1465..1862+ (Laminarionema elsbetiae ELsaHSoW15)back to top |