mRNA_L-elsbetiae_contig12627.2119.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: A0A124F645_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A124F645_9GAMM) HSP 1 Score: 94.7 bits (234), Expect = 7.570e-22 Identity = 56/86 (65.12%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 1 SKLDPLPLDLHVLGLPPAFNLSHDQTLQFKIIP------KAAKANQTWLKVQTNSFNYRLKTFVSKTFV*KRSFS*PLALIFGDLS 240 SKLD LPLDLHVLGLPPAFNLSHDQTLQFKI K +ANQTWLKVQTNSF K V F+ + LALIFGDLS Sbjct: 1 SKLDLLPLDLHVLGLPPAFNLSHDQTLQFKIYAVLTCHSKVTEANQTWLKVQTNSFKTDNKERVFIIFLLES-----LALIFGDLS 81
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: UPI001D023143 (hypothetical protein n=1 Tax=Halomonas sp. 1M45 TaxID=1255591 RepID=UPI001D023143) HSP 1 Score: 89.0 bits (219), Expect = 6.520e-20 Identity = 47/70 (67.14%), Postives = 51/70 (72.86%), Query Frame = 3 Query: 339 AGLSEEGVFYAVPGVCQPLFSASEANNEPALTS*QTKAFTP*CCLKSPLVTLGVPGSGCVLYGFAAGLAR 548 A LSEEGVFYA P VCQPLFSA EA++ + F+P SPLVTLGVPGSGCVLYGFAAGLAR Sbjct: 22 ACLSEEGVFYAFPDVCQPLFSAGEASDLNLANFLTNRRFSP----SSPLVTLGVPGSGCVLYGFAAGLAR 87
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: UPI001D0BCEFE (hypothetical protein n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0BCEFE) HSP 1 Score: 89.0 bits (219), Expect = 1.940e-19 Identity = 54/101 (53.47%), Postives = 61/101 (60.40%), Query Frame = 3 Query: 261 MNYLIKLLKSGFAVR*R*NHRAAGELAGLSEEGVFYAVPGVCQPLFSASEANNEPALTS*QTKAFTP*CCLKSPLVTLGVPGSGCVLYGFAAGLARGLMKS 563 MNYLI LKS + + + A LSEEGVFYA PGVCQPL A E + E + F+P SPL TLGVPGSGCVLYGFAAG ARG K+ Sbjct: 1 MNYLIIFLKSDSL---KLDIDSMTGAACLSEEGVFYAFPGVCQPLIFAVEVSLELLANFLANRRFSP----SSPLATLGVPGSGCVLYGFAAGSARGFWKN 94
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: A0A1J8Q002_9GAMM (Uncharacterized protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A1J8Q002_9GAMM) HSP 1 Score: 86.3 bits (212), Expect = 4.860e-19 Identity = 44/56 (78.57%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 1 SKLDPLPLDLHVLGLPPAFNLSHDQTLQFKII------PKAAKANQTWLKVQTNSF 150 SKLD LPLDLHVLGLPPAFNLSHDQTLQFKI PK +A+QTWLKVQTNSF Sbjct: 13 SKLDLLPLDLHVLGLPPAFNLSHDQTLQFKIYVILTCHPKVTEADQTWLKVQTNSF 68
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: UPI001EE36D24 (hypothetical protein n=1 Tax=Halomonas sp. A3H3 TaxID=1346287 RepID=UPI001EE36D24) HSP 1 Score: 85.5 bits (210), Expect = 8.950e-19 Identity = 44/56 (78.57%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 1 SKLDPLPLDLHVLGLPPAFNLSHDQTLQFKII------PKAAKANQTWLKVQTNSF 150 SKL LPLDLHVLGLPPAFNLSHDQTLQFKI P+A KA+QTWLKVQTNSF Sbjct: 6 SKLPLLPLDLHVLGLPPAFNLSHDQTLQFKIYVILTCHPRATKADQTWLKVQTNSF 61
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: A0A7U9BXN5_9GAMM (Uncharacterized protein n=2 Tax=Halomonas boliviensis TaxID=223527 RepID=A0A7U9BXN5_9GAMM) HSP 1 Score: 87.0 bits (214), Expect = 1.080e-18 Identity = 45/59 (76.27%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 16 LPLDLHVLGLPPAFNLSHDQTLQFKIIP------KAAKANQTWLKVQTNSFNYRLKTFV 174 LPLDLHVLGLPPAFNLSHDQTLQFKI K +ANQTWLKVQTNSFN LKT+V Sbjct: 70 LPLDLHVLGLPPAFNLSHDQTLQFKIYAVLTRHSKVTEANQTWLKVQTNSFNCCLKTYV 128
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: UPI001D0A1F59 (hypothetical protein n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0A1F59) HSP 1 Score: 82.0 bits (201), Expect = 4.580e-17 Identity = 52/103 (50.49%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 261 MNYLIKLLKSGFAVR*R*NHRAAGELAG---LSEEGVFYAVPGVCQPLFSASEANNEPALTS*QTKAFTP*CCLKSPLVTLGVPGSGCVLYGFAAGLARGLMK 560 MNYLI LKS G + G LSEEGVFYA GVCQPL A + + E + F P SPL TLGVPGSGCVLYGFAAG ARG + Sbjct: 1 MNYLIIFLKSDSLKL------DIGSMTGAACLSEEGVFYAFHGVCQPLIFAVDVSLEHLANLLTNRRFYP----SSPLATLGVPGSGCVLYGFAAGSARGFSE 93
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: H0IZD6_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Halomonas sp. GFAJ-1 TaxID=1118153 RepID=H0IZD6_9GAMM) HSP 1 Score: 80.5 bits (197), Expect = 2.690e-16 Identity = 52/108 (48.15%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 245 ISKRPHELPDQIVKERFRCQMTLKSSGCR*TGGPQRGRRILRSSWC---LSTAVFSE*SEQ*TCSNFLTNQGFYTLMLLKITAGNAWRPRQRMRTLRLRCRVGKGFDE 559 I KRPHELPDQIVKERF C + G C S FSE E SN LTN+ F TAGNAWRPRQRMRTLR+R R+GKG+ E Sbjct: 5 IGKRPHELPDQIVKERFANNWLAVELACL----SEEGVFYAFPGGCQPLFSVTEFSERGEPQNRSNLLTNRRFSP----SFTAGNAWRPRQRMRTLRIRRRLGKGYFE 104
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: UPI001F15B265 (hypothetical protein n=1 Tax=Halomonas sp. G11 TaxID=1684425 RepID=UPI001F15B265) HSP 1 Score: 80.5 bits (197), Expect = 3.760e-16 Identity = 58/112 (51.79%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 237 VSPS-ASAHMNYLIKLLKSGFAVR*R*NHRAAGELAGLSEEGVFYAVPGVCQPLFSASEANNEPALTS*Q------TKAFTP*CCLKSPLVTLGVPGSGCVLYGFAAGLARG 551 +SPS ASAHMNYLI LLKS VR R + L LSEEGVFYA+ +CQ L S+ N AL S + FTP + PL T VPGSGCVLY F AGLA G Sbjct: 27 LSPSSASAHMNYLITLLKS---VRLRAVNNMTRPL--LSEEGVFYALRSICQRLIGRSKGNVRLALPSNSLPNLLTNQGFTP----QPPLATPCVPGSGCVLYDFTAGLASG 129
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Match: UPI001C131B73 (hypothetical protein n=1 Tax=Halomonas sp. B1.N12 TaxID=2591147 RepID=UPI001C131B73) HSP 1 Score: 80.5 bits (197), Expect = 4.370e-16 Identity = 42/74 (56.76%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 339 AGLSEEGVFYAVPGVCQPLFSASEANNEPALTS*QTKAFTP*CCLKSPLVTLGVPGSGCVLYGFAAGLARGLMK 560 A LSEEGVFYA P +CQPLFSA EA++ + F+P SPL TLGVPGSGCVLYGF LA + K Sbjct: 8 ACLSEEGVFYAFPDICQPLFSADEASDLNLANFLTNRRFSP----SSPLATLGVPGSGCVLYGFVGRLASTIFK 77 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12627.2119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12627.2119.1 >prot_L-elsbetiae_contig12627.2119.1 ID=prot_L-elsbetiae_contig12627.2119.1|Name=mRNA_L-elsbetiae_contig12627.2119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=64bp SKLDPLPLDLHVLGLPPAFNLSHDQTLQFKIIPKAAKANQTWLKVQTNSFback to top mRNA from alignment at L-elsbetiae_contig12627:2..596- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12627.2119.1 ID=mRNA_L-elsbetiae_contig12627.2119.1|Name=mRNA_L-elsbetiae_contig12627.2119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=595bp|location=Sequence derived from alignment at L-elsbetiae_contig12627:2..596- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12627:2..596- >mRNA_L-elsbetiae_contig12627.2119.1 ID=mRNA_L-elsbetiae_contig12627.2119.1|Name=mRNA_L-elsbetiae_contig12627.2119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=384bp|location=Sequence derived from alignment at L-elsbetiae_contig12627:2..596- (Laminarionema elsbetiae ELsaHSoW15)back to top |