mRNA_L-elsbetiae_contig12622.2116.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5KF72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF72_9PHAE) HSP 1 Score: 134 bits (337), Expect = 3.970e-32 Identity = 67/103 (65.05%), Postives = 75/103 (72.82%), Query Frame = 1 Query: 1672 EPDGRLPKRLMFGKLMGGENPGAGNPEQNWGKCRKDYFKAF--------------GIPSADWETAAKVEGGRPWYEEVLRGAERFMASWHKDEEEASRQRAIK 1938 +PDGRLPKRLMFG+L+GGENPG G+PEQNW C KD K F GIP DW+ AAKVEGG PW+ VL+GAERFMASWHK EE+ASRQRAIK Sbjct: 69 QPDGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGIPKPDWDEAAKVEGGVPWHAGVLQGAERFMASWHKGEEKASRQRAIK 171
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5JMY1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY1_9PHAE) HSP 1 Score: 132 bits (332), Expect = 4.670e-32 Identity = 68/115 (59.13%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 1672 EPDGRLPKRLMFGKLMGGENPGAGNPEQNWGKCRKDYFKAF--------------GIPSADWETAAKVEGGRPWYEEVLRGAERFMASWHKDEEEASRQRAIKPDKKRLSSKIDT 1974 EPDGRLPKRLMFG+L+GGENPG G+PEQNW C KD K F GIP DW+ A +VEGG PW+ VL+GAERFMASWHK EE+ASRQRAIK + +DT Sbjct: 21 EPDGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGIPKPDWDDAEEVEGGVPWHAGVLQGAERFMASWHKGEEKASRQRAIKRGDSGPKNSLDT 135
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 142 bits (359), Expect = 2.560e-31 Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 2 Query: 1265 KQPAPIYDEQGDEFDVPQVTIDAIESFQVPGGFQQQGSREESFLFSLGNYYEAVGVVSKNSAAFKAFYKCQVGTCRLGKKTIPCAKGSRSNVNKHHREVHKLRGSKGQTRQANLRTSTSSFHQAMEAKKTFSVG 1666 KQPAPIY + GD+F VPQVTID+IESF+ +Q++G+RE+SFL+SLGNY V + S + +YKCQVG CR KT PC KGS+SNVNKH REVH+L G+KG R N + + AM A KTF VG Sbjct: 47 KQPAPIYTKSGDDFVVPQVTIDSIESFKAKDEYQREGAREDSFLYSLGNYAAPV----EKSGKWIGYYKCQVGKCRTSTKTTPCPKGSKSNVNKHFREVHQLVGAKGAVRMENAQNHQGNIRAAMGASKTFGVG 176
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5JWS4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS4_9PHAE) HSP 1 Score: 130 bits (326), Expect = 3.360e-29 Identity = 66/115 (57.39%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 1672 EPDGRLPKRLMFGKLMGGENPGAGNPEQNWGKCRKDYFK--------------AFGIPSADWETAAKVEGGRPWYEEVLRGAERFMASWHKDEEEASRQRAIKPDKKRLSSKIDT 1974 +PDGRLPKRLMFG+L+GGE+PG GNPEQNW C KD K FG+P W AAKVEGG PW+ VL+GAERFMASWHK +EEA+RQRAIK + +DT Sbjct: 207 QPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMFEARYGSTTDKPSVFGVPKLVWSEAAKVEGGVPWHAGVLQGAERFMASWHKGKEEANRQRAIKRGDSGPKNSLDT 321
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5JS41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS41_9PHAE) HSP 1 Score: 122 bits (305), Expect = 3.810e-29 Identity = 60/97 (61.86%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 1672 EPDGRLPKRLMFGKLMGGENPGAGNPEQNWGKCRKDYFKA--------------FGIPSADWETAAKVEGGRPWYEEVLRGAERFMASWHKDEEEAS 1920 +PDGRLPKRLMFG+L+GGENPG G+PEQNW C KD K FGIP DW+ AAKVEGG PW+ VL+GA RFMASWHK EE+AS Sbjct: 10 QPDGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMIEARHGSTPDKRSFFGIPKPDWDEAAKVEGGVPWHAGVLQGAGRFMASWHKGEEKAS 106
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE) HSP 1 Score: 134 bits (338), Expect = 3.830e-29 Identity = 69/115 (60.00%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 1672 EPDGRLPKRLMFGKLMGGENPGAGNPEQNWGKCRKDYFKAF--------------GIPSADWETAAKVEGGRPWYEEVLRGAERFMASWHKDEEEASRQRAIKPDKKRLSSKIDT 1974 +PDGRLPKRLMFG+L+GGENPG G+PEQNW C KD K F GIP DW+ AAKVEGG PW+ VL+GAERFMASWHK EE+ASRQRAIK + +DT Sbjct: 490 QPDGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGIPKPDWDEAAKVEGGVPWHAGVLQGAERFMASWHKGEEKASRQRAIKRGDSGPKTSLDT 604
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5JKI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI4_9PHAE) HSP 1 Score: 134 bits (338), Expect = 6.710e-29 Identity = 69/115 (60.00%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 1672 EPDGRLPKRLMFGKLMGGENPGAGNPEQNWGKCRKDYFKAF--------------GIPSADWETAAKVEGGRPWYEEVLRGAERFMASWHKDEEEASRQRAIKPDKKRLSSKIDT 1974 +PDGRLPKRLMFG+L+GGENPG G+PEQNW C KD K F GIP DW+ AAKVEGG PW+ VL+GAERFMASWHK EE+ASRQRAIK + +DT Sbjct: 596 QPDGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGIPKPDWDEAAKVEGGVPWHAGVLQGAERFMASWHKGEEKASRQRAIKRGDSGPKNSLDT 710
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5K9G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9G5_9PHAE) HSP 1 Score: 134 bits (336), Expect = 7.940e-29 Identity = 68/115 (59.13%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 1672 EPDGRLPKRLMFGKLMGGENPGAGNPEQNWGKCRKDYFK--------------AFGIPSADWETAAKVEGGRPWYEEVLRGAERFMASWHKDEEEASRQRAIKPDKKRLSSKIDT 1974 +PDGRLPKRLMFG+L+GGE+PG GNPEQNW C KD K FG+P W AAKVEGG PW+ VL+GAERFMASWHK +EEASRQRAIK R + +DT Sbjct: 513 QPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMFEARYGSTTDKPSVFGVPKLVWSEAAKVEGGVPWHAGVLQGAERFMASWHKGKEEASRQRAIKRGDSRPKNSLDT 627
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5JKD2_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKD2_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.240e-28 Identity = 67/113 (59.29%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 1678 DGRLPKRLMFGKLMGGENPGAGNPEQNWGKCRKDYFKAF--------------GIPSADWETAAKVEGGRPWYEEVLRGAERFMASWHKDEEEASRQRAIKPDKKRLSSKIDT 1974 DGRLPKRLMFG+L+GGENPG G+PEQNW C KD K F GI DW+ AAKVEGG PW+ VL+GAERFMASWHK EE+ASRQRAIK + +DT Sbjct: 185 DGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGILKPDWDEAAKVEGGVPWHAGVLQGAERFMASWHKGEEKASRQRAIKRGDSGPKNSLDT 297
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE) HSP 1 Score: 134 bits (336), Expect = 3.040e-28 Identity = 68/115 (59.13%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 1672 EPDGRLPKRLMFGKLMGGENPGAGNPEQNWGKCRKDYFK--------------AFGIPSADWETAAKVEGGRPWYEEVLRGAERFMASWHKDEEEASRQRAIKPDKKRLSSKIDT 1974 +PDGRLPKRLMFG+L+GGE+PG GNPEQNW C KD K FG+P W AAKVEGG PW+ VL+GAERFMASWHK +EEASRQRAIK R + +DT Sbjct: 1478 QPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMFEARYGSTTDKPSVFGVPKLVWSEAAKVEGGVPWHAGVLQGAERFMASWHKGKEEASRQRAIKRGDSRPKNSLDT 1592 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12622.2116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12622.2116.1 >prot_L-elsbetiae_contig12622.2116.1 ID=prot_L-elsbetiae_contig12622.2116.1|Name=mRNA_L-elsbetiae_contig12622.2116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=554bp MSKCTHGDCTRCPLFGVRGSKTAELCVQHAKEGMVNVRNKSRCGHPGCNKback to top mRNA from alignment at L-elsbetiae_contig12622:407..4646- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12622.2116.1 ID=mRNA_L-elsbetiae_contig12622.2116.1|Name=mRNA_L-elsbetiae_contig12622.2116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4240bp|location=Sequence derived from alignment at L-elsbetiae_contig12622:407..4646- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12622:407..4646- >mRNA_L-elsbetiae_contig12622.2116.1 ID=mRNA_L-elsbetiae_contig12622.2116.1|Name=mRNA_L-elsbetiae_contig12622.2116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3324bp|location=Sequence derived from alignment at L-elsbetiae_contig12622:407..4646- (Laminarionema elsbetiae ELsaHSoW15)back to top |