mRNA_L-elsbetiae_contig12619.2112.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12619.2112.1
Unique NamemRNA_L-elsbetiae_contig12619.2112.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: D7FXC8_ECTSI (SANT_DAMP1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC8_ECTSI)

HSP 1 Score: 447 bits (1151), Expect = 1.600e-155
Identity = 221/246 (89.84%), Postives = 233/246 (94.72%), Query Frame = 1
Query:    1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV 738
            MGDVADILGLGGP APSGRASPVLGGPLGPLQENKRGKGGAAP KK GKPQGVSREVYALLGSEGLPPEGPVSNPSLV+D +QQDP S+K QP SKW+WVPF+SSARSDGATFEHWQKE +EKDS DYAYARYNVKVDIDNHLRY+DEEYKQHLT+A+WTKLETDH+V +ALKYDLRWPV+KDRYK  PDRPVQELQQRFYDVANRLQ VRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV
Sbjct:    1 MGDVADILGLGGPPAPSGRASPVLGGPLGPLQENKRGKGGAAPIKKAGKPQGVSREVYALLGSEGLPPEGPVSNPSLVRDGSQQDPASSK-QPCSKWKWVPFSSSARSDGATFEHWQKESDEKDSGDYAYARYNVKVDIDNHLRYSDEEYKQHLTEASWTKLETDHLVAMALKYDLRWPVIKDRYKCTPDRPVQELQQRFYDVANRLQAVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV 245          
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A6H5JTR5_9PHAE (SANT_DAMP1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTR5_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 1.260e-150
Identity = 221/270 (81.85%), Postives = 232/270 (85.93%), Query Frame = 1
Query:    1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLT-------------------DAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQ-----TVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV 738
            MGDVADILGLGGP APSGRASPVLGGPLGPLQENKRGKGGAAP KK GKPQGVSREV+ALLGSEGLPPEGPVSNPSLVKD +QQDP S+K QP SKW+WVPFTSSARSDGATFEHWQKE +EKDS DYAYARYNVKVDIDNHLRY+DEEYKQHLT                   +A+WTKLETDH+V +ALKYDLRWP +KDRYK  PDRP QELQQRFYDVANRLQ     TVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV
Sbjct:    1 MGDVADILGLGGPPAPSGRASPVLGGPLGPLQENKRGKGGAAPIKKAGKPQGVSREVHALLGSEGLPPEGPVSNPSLVKDGSQQDPASSK-QPCSKWKWVPFTSSARSDGATFEHWQKESDEKDSGDYAYARYNVKVDIDNHLRYSDEEYKQHLTVSWRKWMFDFVEGFVGLYTEASWTKLETDHLVAMALKYDLRWPAIKDRYKCTPDRPAQELQQRFYDVANRLQVASHTTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV 269          
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A835YGE4_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGE4_9STRA)

HSP 1 Score: 162 bits (409), Expect = 5.150e-44
Identity = 105/260 (40.38%), Postives = 141/260 (54.23%), Query Frame = 1
Query:    1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGS--------------LLTMPGLTAFNATHEAERRQQLEV 738
            MGDVAD+LG+    AP   A   LGG      + K+G+      +K  KP G+SREVYALLG +GLPP  P   PS            AK     +W WV F +SAR+D  TF HW K   +    DYAYA+YNVK +    + Y+D EY++ L  + WT+ ETD ++ L  ++DL WPV+ DR++    RPV+ LQ+RFYDV  +L+  R      AGGG               LL  PG  AF+  +E +RR QL++
Sbjct:    1 MGDVADLLGVERAEAPDPLAL-ALGG------KTKKGE------RKAAKPVGMSREVYALLGEQGLPPSMPTKKPS------------AKGGGGVRWEWVEFANSARADNVTFFHWVKASAQH--PDYAYAKYNVKTEA---VTYSDGEYERLLRASDWTRAETDQLMRLCARHDLCWPVIADRFEARAARPVESLQERFYDVVAKLRAAR------AGGGKXXXXXXXXXXXIGGLLAAPGADAFDREYERKRRHQLDL 224          
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A7S2S7D5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7D5_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.050e-36
Identity = 99/268 (36.94%), Postives = 135/268 (50.37%), Query Frame = 1
Query:    1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPP--EGPVSNPSLVKD-----SNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRR----------TASNGAGGGSL------LTMPGLTAFNATHEAERRQQLE 735
            MGDV+DILG+              G PL  L  +    G      KT +P  VSREVYAL+G   +P    G  S   L+        + Q  K  +     KW+W P+ +SAR+DG  F  W K     D  DY YAR+NV++   + L YTDEEY+ HL D +WT+ +TD +V L  +YDLRWPV+ DRY  +P R +++LQ R+Y +A ++  VRR          TA    G   L      L +     +N   E ERR+QL+
Sbjct:    1 MGDVSDILGV------KKEKDDKKGVPLSALAGDS---GRRKKPAKTSRPPNVSREVYALMGFNAMPAGDAGDASTNPLLPSMAPAAGSMQGFKDKRSGIAQKWQWAPYQNSARTDGVEFSRWHKVG--VDYMDYPYARFNVRL---SKLEYTDEEYELHLQDPSWTRSDTDKLVALCARYDLRWPVIADRYNQIPRRSMEQLQHRYYTMAQKVLLVRRRIYEAEEDRDTAGLATGKDRLEAKAQALGVSLHVRYNLEFEMERRRQLD 254          
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A6J1S6K2_FRAOC (DNA methyltransferase 1-associated protein 1-like n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1S6K2_FRAOC)

HSP 1 Score: 141 bits (355), Expect = 8.820e-36
Identity = 91/249 (36.55%), Postives = 138/249 (55.42%), Query Frame = 1
Query:    1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALL--GSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRY--KLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLE 735
            MGDV DILGL  P  P      +LG       + K+ +   +  K + +P+G+ REV+ALL   S+G+PP  P       K +  +       + V  W+W+PFT+  R+DGA F HW++  +E    +Y +A++N KV + +   YTD+EY QHL    WTK ET+H++ LA ++DLR+ V+KDR+  +   DR V+EL++RFY +   L  VR T+            P    F+A HE  R++QL+
Sbjct:    1 MGDVQDILGLERPPTPELTKEAILGS----SDKLKKKQMQMSTPKVSKRPEGMPREVFALLCNDSKGVPPVFPTDTGQGYKQTKAK----LGMRKVRPWKWMPFTNPGRTDGAVFHHWRRVADE--GKEYPFAKFNKKVPVPS---YTDDEYNQHLQTTGWTKEETNHLIDLAKRFDLRFIVMKDRFDKEKFTDRSVEELKERFYTIQTTLTKVRSTSPPEG-------KP--YVFDADHERRRKEQLK 227          
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: W1NFX0_AMBTC (Myb-like domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NFX0_AMBTC)

HSP 1 Score: 140 bits (352), Expect = 2.320e-35
Identity = 99/245 (40.41%), Postives = 132/245 (53.88%), Query Frame = 1
Query:    1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQK-EKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQL 732
            M D  DILGL     PS               + KR K    P +   KP GVSREVYAL+G  GLPP  P  + S +K    + P S KE+    W+W+PFTSSAR+D     HW K       + DY++A+YN  VDI   +RYTDEEY+++LTD  WTK ETD +  L  ++DLR+ V+ DR+     R  +EL+ R+Y V+  L   +   S    G  L+  P    +N THE ER++QL
Sbjct:    1 MADAKDILGLPKTHFPS--------------TQEKRPK---PPKESQRKPDGVSREVYALMG--GLPPLMPTLDISQLK----RKPPSDKEK--ISWQWLPFTSSARTDNLKLYHWVKIVNGVPPTGDYSFAKYNKSVDI---VRYTDEEYEKYLTDPNWTKEETDQLFDLCEQFDLRFIVIADRFPT--SRSTEELKSRYYAVSRALVIAKAPPSGDVSGHPLVKDP----YNITHEVERKRQL 211          
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A7R9Y843_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y843_9STRA)

HSP 1 Score: 133 bits (334), Expect = 4.600e-35
Identity = 81/218 (37.16%), Postives = 121/218 (55.50%), Query Frame = 1
Query:    1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGA 654
            MGDVA ILG+G   A   + +            N+    G    +K  KP G+SREV++LLG+ GLP   P  +    K  + +  +   ++   KW+W  F +SAR D  + +HWQK   E    DY ++R+NV ++    + Y+DEEY + L   +WT+ ETD+++ L  +YDLRWPV+ DRY L P R V+++Q+R+YDV   L   R  A+  A
Sbjct:    1 MGDVAAILGMGANGAKDPKDA-----------SNQNKSTGRKRDRKAVKPAGMSREVFSLLGAGGLPSLAPAGD---AKGGHFKRRRVTGQE--GKWKWTTFKNSARGDKFSAKHWQKASVEY--PDYPFSRFNVSLES---VVYSDEEYDKVLASGSWTRSETDYLMILCQRYDLRWPVIADRYTLTPLRAVEDMQKRYYDVVRALILYRTEAAKAA 197          
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A6H5K284_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K284_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 5.050e-35
Identity = 68/82 (82.93%), Postives = 70/82 (85.37%), Query Frame = 1
Query:    1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPE-------GPVSNP 225
            MGDVADILGLGGP APSGRASPVLGGPLGPLQENKRGKGGAAP KK GKPQGVSREV+ALLGSEGLPPE       GP+  P
Sbjct:    1 MGDVADILGLGGPPAPSGRASPVLGGPLGPLQENKRGKGGAAPIKKAGKPQGVSREVHALLGSEGLPPEVCSVVCAGPLRGP 82          
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A452ZPU4_AEGTS (Myb-like domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZPU4_AEGTS)

HSP 1 Score: 135 bits (339), Expect = 6.880e-35
Identity = 91/243 (37.45%), Postives = 126/243 (51.85%), Query Frame = 1
Query:    7 DVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEE-KDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQL 732
            D  DILGL   S PS              QE K      AP +   KP GVSREVYAL G  G+ P  P    S +K       + A E+    W+W+PFTSSAR+D     HW +       + DY +A+YN KVD+   L+YTDEEY+++LT+  W++ ETD +  L  ++DLR+ V+ DR+     R V++L+ R+Y V   L   R  + +   G  L+       FNA HE ER++ L
Sbjct:   46 DAKDILGLQKTSFPS-------------AQEKKP----RAPKEPQRKPDGVSREVYALTGGVGMAPLMPTIEASHLKR------RPAVEKEKVAWQWLPFTSSARTDNLQLYHWVRVVNNVPPTGDYDFAKYNTKVDV---LKYTDEEYEKYLTEPTWSREETDQLFELCQRFDLRFIVIADRFPTA--RSVEDLKSRYYSVTRALLIARARSFDEVAGNPLVK----ETFNAAHETERKRAL 256          
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A0D9WJ77_9ORYZ (Myb-like domain-containing protein n=2 Tax=Oryzinae TaxID=1648021 RepID=A0A0D9WJ77_9ORYZ)

HSP 1 Score: 137 bits (345), Expect = 3.200e-34
Identity = 88/228 (38.60%), Postives = 126/228 (55.26%), Query Frame = 1
Query:   58 ASPVLGGPLG--PLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKE-EKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQL 732
            A  +LG P G  P  + K+ +   AP +   KP GVSREVYAL G  G+PP  P    S +K       + A E+    W+W+PFTSSAR+D     HW +       + DY +A+YN K D+   L+Y DEEY+++LTD AW++ ETD +  L  ++DLR+ V+ DR+    DR V++L+ R+Y V   L   R  + +   G  L+       FNA HE ER++ L
Sbjct:    3 AKDILGIPKGVFPSVQEKKPR---APKEPQRKPDGVSREVYALTGGVGMPPLMPTIEASHLKR------RPAVEKEKVAWQWLPFTSSARADSLQLYHWVRVVNGAPPTGDYHFAKYNKKADV---LKYNDEEYEKYLTDPAWSREETDQLFELCERFDLRFVVIADRFPT--DRSVEDLKSRYYSVTRALLIARARSFDEVAGNPLVK----ETFNAAHETERKRAL 212          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXC8_ECTSI1.600e-15589.84SANT_DAMP1_like domain-containing protein n=1 Tax=... [more]
A0A6H5JTR5_9PHAE1.260e-15081.85SANT_DAMP1_like domain-containing protein n=1 Tax=... [more]
A0A835YGE4_9STRA5.150e-4440.38Myb-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2S7D5_9STRA1.050e-3636.94Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6J1S6K2_FRAOC8.820e-3636.55DNA methyltransferase 1-associated protein 1-like ... [more]
W1NFX0_AMBTC2.320e-3540.41Myb-like domain-containing protein n=1 Tax=Amborel... [more]
A0A7R9Y843_9STRA4.600e-3537.16Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
A0A6H5K284_9PHAE5.050e-3582.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A452ZPU4_AEGTS6.880e-3537.45Myb-like domain-containing protein n=1 Tax=Aegilop... [more]
A0A0D9WJ77_9ORYZ3.200e-3438.60Myb-like domain-containing protein n=2 Tax=Oryzina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12619contigL-elsbetiae_contig12619:240..4892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.9
Seed ortholog evalue2.4e-125
Seed eggNOG ortholog2880.D7FXC8
Preferred nameSWC4
KEGG koko:K11324,ko:K13865,ko:K21412
KEGG TC2.A.3.3.5
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000123,GO:0000228,GO:0000785,GO:0000790,GO:0000812,GO:0000981,GO:0001085,GO:0001103,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0003712,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006305,GO:0006306,GO:0006325,GO:0006338,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008134,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016569,GO:0016570,GO:0016573,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0031248,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032259,GO:0032386,GO:0032388,GO:0032879,GO:0032880,GO:0032991,GO:0033157,GO:0033554,GO:0034641,GO:0034728,GO:0035267,GO:0036211,GO:0042306,GO:0042307,GO:0043044,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043486,GO:0043543,GO:0043933,GO:0043967,GO:0043968,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044728,GO:0045892,GO:0045934,GO:0046483,GO:0046822,GO:0046824,GO:0048518,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051222,GO:0051223,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070201,GO:0070491,GO:0070603,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090087,GO:0090304,GO:0090316,GO:0097159,GO:0097346,GO:0140110,GO:1900180,GO:1900182,GO:1901360,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1903506,GO:1903507,GO:1903827,GO:1903829,GO:1904589,GO:1904591,GO:1904949,GO:1904951,GO:1990234,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.histone H2A acetylation
EggNOG OGsKOG2656@1,KOG2656@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko03036
Ec32 ortholog descriptionDNA methyltransferase 1-associated protein 1
Ec32 orthologEc-04_000140.1
Exons6
Model size738
Cds size738
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12619.2112.1prot_L-elsbetiae_contig12619.2112.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12619 240..4892 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815453.182798-CDS-L-elsbetiae_contig12619:239..3531622815453.182798-CDS-L-elsbetiae_contig12619:239..353Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 240..353 -
1691682905.2385452-CDS-L-elsbetiae_contig12619:239..3531691682905.2385452-CDS-L-elsbetiae_contig12619:239..353Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 240..353 -
1622815453.1958494-CDS-L-elsbetiae_contig12619:795..9541622815453.1958494-CDS-L-elsbetiae_contig12619:795..954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 796..954 -
1691682905.2533455-CDS-L-elsbetiae_contig12619:795..9541691682905.2533455-CDS-L-elsbetiae_contig12619:795..954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 796..954 -
1622815453.209603-CDS-L-elsbetiae_contig12619:1336..14061622815453.209603-CDS-L-elsbetiae_contig12619:1336..1406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 1337..1406 -
1691682905.2690358-CDS-L-elsbetiae_contig12619:1336..14061691682905.2690358-CDS-L-elsbetiae_contig12619:1336..1406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 1337..1406 -
1622815453.2191012-CDS-L-elsbetiae_contig12619:2228..23331622815453.2191012-CDS-L-elsbetiae_contig12619:2228..2333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 2229..2333 -
1691682905.279475-CDS-L-elsbetiae_contig12619:2228..23331691682905.279475-CDS-L-elsbetiae_contig12619:2228..2333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 2229..2333 -
1622815453.2315466-CDS-L-elsbetiae_contig12619:3223..33061622815453.2315466-CDS-L-elsbetiae_contig12619:3223..3306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 3224..3306 -
1691682905.2881227-CDS-L-elsbetiae_contig12619:3223..33061691682905.2881227-CDS-L-elsbetiae_contig12619:3223..3306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 3224..3306 -
1622815453.243063-CDS-L-elsbetiae_contig12619:4685..48921622815453.243063-CDS-L-elsbetiae_contig12619:4685..4892Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 4686..4892 -
1691682905.2962997-CDS-L-elsbetiae_contig12619:4685..48921691682905.2962997-CDS-L-elsbetiae_contig12619:4685..4892Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12619 4686..4892 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12619.2112.1

>prot_L-elsbetiae_contig12619.2112.1 ID=prot_L-elsbetiae_contig12619.2112.1|Name=mRNA_L-elsbetiae_contig12619.2112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp
MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKP
QGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWV
PFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEY
KQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRF
YDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV
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mRNA from alignment at L-elsbetiae_contig12619:240..4892-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12619.2112.1 ID=mRNA_L-elsbetiae_contig12619.2112.1|Name=mRNA_L-elsbetiae_contig12619.2112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4653bp|location=Sequence derived from alignment at L-elsbetiae_contig12619:240..4892- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGATGTGGCGGATATCCTCGGTCTTGGTGGGCCATCGGCGCCGTC TGGAAGGGCGTCGCCGGTGCTTGGGGGTCCTTTGGGCCCTCTCCAAGAAA ACAAGCGAGGCAAGGGTGGGGCGGCTCCTGCGAAGAAGACCGGCAAGCCT CAGGGTGTGAGCCGTGAGGTGTACGCCTTACTAGGATCGGAAGGGCTTCC GCCAGAGGTAAGGTTTGTCCCAAACATTCTTCAAAGTCGTCAATCTTCTT TGGTTGGAGTGTAAGTCGACAATTCGCCTATTTACTGATGCAAATCTGCA GTCACGGAGCGGTCGGCGGTGATACTCGGCGGCGCTGCTTCCTGCTGTCT CTGCTCTCTCTCCCAAAAAATATGTTCCATGTGTGCGTGTATGTGTTAGT ATTTATTCTGCTTTGAAAGCACGATGGCCCGTATTTTGGACTATATTGCC AGTGACAGCAGTGTATCAAACGGAGTATTTGGATACTGCTTATCGTACCA TCTTGCCAGGTCGAGGAAGGGGTCACCGCGGTAGGATTTACTTGTTTCGG TCGAGCACTTGAGCACACACGGGCATGCAAACGCACAAGCTGGGGTAGCT GGAGAAGGGAAATGGGAGATACCCAGATACCCGTGTCGGCAGTCTCTAAA GAGGATGGGCGCGACAGCAGCGAGAGCATCTAAAAGCTTGAAATCCCAAC GAACGCGCCGACCGTTTTTCCCTCTGCCAGCGGCACACGCGATAACTGAC ACAGTACACCTGCAGTGCTTACTGCCCGTAATGCCCGATACAGTTGCGCG CCCAATGCTGTGGTGTCATGTTTCTCTTCCCGCAGTTCGTTCACCGAGTT TTGCCAAAGGTTACAATTCTCTCATGACACACCCTGTTTCTTTCACCATT CGCCAGCCATGTAGGTGTGCTCCACTCGCGTTTCACTTCGAGAGCTCTCA AGATTATTCGGATTCTCTGGTGTTGTTGAAGCGTCGCTTTGTCACCACGA TAAAAACACATAGCAGCAGTTCCGAATCCACCAAAAAAACTGGAGAACGA CGAAACGGAGAAACAGTAATATTCCTCCAAAATCGCCCCAACTTCGTTGC TGACGAGCTCTACACATCTCCCAGCAGCAGCGGCTTTCTGACCACCACGA ATTATTGAAGGCCTATTTTTTGCGTACATGTGCCTGGCCGGCGAGAACCC GGCGCGGAACACCCCGGCATTGTTGGGGTACCAAGATAGAACCAGGGGGT GTATTCCCCGCGGTTGGCGATGTTGGCTTTTCCACCTTTGTTTTCACCTC GCATCGTATGTATGGTAGCGAAGGGCTCTAGACTGTTACAAGATCTTTTG TTTTTTGTGCTTTGTGGACCCTTCGGATCCGTTAATTCATTTTCTTTCTT GTTTTCAGCGTATGTGTGCCCTTTTTAGGGTGAGTTATCCTGTGACCACG GGAATCGACTGCCTCGGTGTTGGATTAGTACGGACTCACGATGGAGGTGT ACTGGACAGAGAGATCGGAACGGTTTTTGATGTCAATACAACAACAACAA CATGTGCGCTGTTGTGACATCTTGCCCTGCAAGCAGGGGCCGGTCTCGAA CCCATCGCTGGTGAAGGACAGCAACCAGCAGGACCCCAAGTCAGCCAAGG AGCAACCGGTCAGCAAGTGGTGAGTGAGCAAAGAAAAAACAATGGAGAAA AGGGAAAAGAGAAAAAAAGTGCCCGCGTGAAACTGAACGCGGACGGGGCA AAACAATGGACTTTCTGACGGCCATCACAAAGGCTGCGTTTCTTTTGACA CTGACAAAGGTTTCGACGAGTTTGGGTAGAGGCGAGCGTGCCGCAGGTGG AAGAACGTAGTGACGACATCATTGCTCCGGTACACACCCCTCTTTACCTC GCTCCGAGCAACGTGACGTGCTGCTTTCCTAGCTTGATATGGGTACTGTA TGGTTTAATTTTCAAGCATATTTATCGAGACAGCAAATACCTGGACAACC CTTTCACCTATCGTTCTCTGAAATGCCTACGGTGTTGTTGTGTGCTGCTG TATGGCGTGGTGGGGTTGTGTTGTTCGTTGAGCACTGGCTGTTGTTGCTT TCATTTTCGTCGTCACGCTGCTGCGGCAAGACAAAAGGTTTCCAGCTACT TGGGGTAAGTTACCCTGTGGCCACGGGAATCGACCGCGTCAGTGTTGGAT TATTATTTACGGAAAACTTCGACCTCACCGTCGACGAGGGAAAGAGACGG CTGAACCCTTCTCGCGACAAAAATATTAGGCACGCACCGCAGAAGGAGTT AGTGGGGGCCTTGGGGAAAAAGGAACCCTTCTGTGTGACCACGGTTCAGT ACTCTGGTAAGATGTCCTCGTGACAAGAAGCCCATCGAGTACGGGAAATA AATGTGAACAAGAAAACAAACATAATTAAAACTCATGGAGGTGTACTGGA TCAGAGAGATCGGAACAGTTTTTAATGTGAAGACAACAGCAACAACGGAT ACCGATTTGTCGTGTCGTGTTTGTGTGCGTCCGTGCGTTTGGGAACGAAA AAAACGCAGGAGATGGGTCCCGTTCACTTCTTCTGCCCGCTCTGACGGTG CAACCTTCGAGCACTGGCAGAAGGAGAAAGAGGAGAAGGACAGCGCCGAC TACGCCTACGCTAGGTGGGTAGTCGGTGACGCGTACTTTTTTATTAATTA ATGTATACAAATGTCAGCAGTGTACGTCCAGTCTGTGAAAAAGTCGTTCC AGAGGGACTGTTGTTGTAGGCATAGACTACTAACTTTTTGTCGCATTTTT TGCTGCTGCCGTACCATCGACCCAGCACGTTGTAGTTAGTTGCCCTTTTC AATTCCACATGGTTCGCTGGTGGTCTGTCTGGGTACGTGAATCCTCTCTT TCCGCACACCCTACTGCTTGTGGATAAGTAGTATTTTCCCCCTCTCCTCG AGCAGGGCCTCCTGCAAAACGGACGCGGAGTTGAGGCTGGTCCAAACAGG CAACAGACGTGAGGTGTTGTTTGTGAGGCCAAACCTCCAAACGCTGCCAG TATCAGCACGACAAGTAGATACTTGTTGGCTCCTCCAGCGCTGTCCGCGT GTAGTTAGCTGGGTGTTGCGTGTTTTGTGCTGAACGCGGTATACACGCCC ATGGTGGTGTTGGTGCTCTCTTGGTCGCCATGTTGTTGTTGTTGCTGCTG TTGTCGCCGTCGTCTTGGCTCGCTTGAGATACTCGTTCGACCTCCGTAGA CGCCGGAAAACCTCCTCTTTTTACTTCCTTCCTCGCTGCGTCCGACATTT TTATTTTATTTTAGCGTTACATGCGGTTGGATTCCTCTGCTTCTGTGTGT TACTGTTGTGCGATTGTTTGTGGGGTGGTAGGCTGTTTGGACGTGGTGAC CGTTCGTGCCGGATGGATTTGTGTAACGTGCTGGACCGCGATGCTTCTGG CCTCGTTTTTGTGTCTTGTTTTCCTCCCTCTCCCAGGTATAACGTGAAGG TGGACATCGACAACCACCTGAGATACACCGACGAGGAATACAAACAGCAC CTCACGGTATGCCTGCGTCGATCTCCAGCTCTGTCCGCGTCTTTTTTGTT AAGCCTTTTTATTTTTGTGCCGACTTGTTATCCCGCCAAAAACCTTGTCT TACAGTAGAGTGCGCAGGCCATTCATTACCTACATCGTGTTCTGGTGTAT TTTTGCGGTAGTGTTGCGGTGGAGTACTTCATACGACGAGGGCCGAGACC GAGGAACCGCGTCGGTACGAAAGGCACCACAGCAATGCGTACACGCCTTC GAAGGCAGCTCTTGAGCCACCCCCGTGCTCTCTGGGGGTCGAGGCTGGGC TCTTGCAGCCTGGCCAACCACGATCAATCGAGTTAACGGCTGCTGCTGCT GCTGTGCGCCTGTTGTGGTTTGTTCGTGCCTGCCGAAGGACGCTGCGTGG ACGAAGCTAGAGACGGACCACGTGGTCACCCTGGCGCTCAAGTACGACCT GCGGTGGCCGGTGGTGAAGGACCGCTACAAGCTGCTCCCCGACAGACCTG TGCAAGAGTTGCAGCAGCGCTTTTACGACGTCGCCAACAGATTGCAGGTG CTGGTGTCCGAGTCCGCGTAACTATCGGTTGCCAGTTTCGAGCCGGTTCA TTCGATGGTCACTGGAACGTGGTGGCGTGTTGCGTGCGTGCGTACTGTAT GTAGCGGGACCAGAAAAAATTGGTTGGCACCGCGTGTATTACGTGGTGTT CGTTATTCTCTTTGTTTTGCCAGGCCCCAGACTGTGACGTCACATATGTT GTACGTCTTCGTGCAACTGCCCGTTTCGCTGTAACTTGATGTTTTGTTTT TTGGTGGAAGAGTCAGGCACAGGTGCAAAGAGCAAAAAACGGGTGGGCGT TACTGTATCAACAGACACACAATCACGTACATACCAATCGACAGCTCGAG AGAGAGATGACGTTGCTATGTAGCGCTAGACCACGCTTCCGCAATCTATG CTGTGCTCTACATATACCGCTCCACTGCTGCATTTGAAGACGGTGAGGAG GACGGCGTCAAACGGCGCGGGTGGGGGGTCGCTGCTGACCATGCCGGGCC TGACTGCCTTCAACGCCACCCACGAGGCCGAGCGGCGGCAGCAGCTGGAG GTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12619:240..4892-

>mRNA_L-elsbetiae_contig12619.2112.1 ID=mRNA_L-elsbetiae_contig12619.2112.1|Name=mRNA_L-elsbetiae_contig12619.2112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1476bp|location=Sequence derived from alignment at L-elsbetiae_contig12619:240..4892- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGATGTGGCGGATATCCTCGGTCTTGGTGGGCCATCGGCGCCGTC
TGGAAGGGCGTCGCCGGTGCTTGGGGGTCCTTTGGGCCCTCTCCAAGAAA
ACAAGCGAGGCAAGGGTGGGGCGGCTCCTGCGAAGAAGACCGGCAAGCCT
CAGGGTGTGAGCCGTGAGGTGTACGCCTTACTAGGATCGGAAGGGCTTCC
GCCAGAGATGGGCGATGTGGCGGATATCCTCGGTCTTGGTGGGCCATCGG
CGCCGTCTGGAAGGGCGTCGCCGGTGCTTGGGGGTCCTTTGGGCCCTCTC
CAAGAAAACAAGCGAGGCAAGGGTGGGGCGGCTCCTGCGAAGAAGACCGG
CAAGCCTCAGGGTGTGAGCCGTGAGGTGTACGCCTTACTAGGATCGGAAG
GGCTTCCGCCAGAGGGGCCGGTCTCGAACCCATCGCTGGTGAAGGACAGC
AACCAGCAGGACCCCAAGTCAGCCAAGGAGCAACCGGTCAGCAAGTGGGG
CCGGTCTCGAACCCATCGCTGGTGAAGGACAGCAACCAGCAGGACCCCAA
GTCAGCCAAGGAGCAACCGGTCAGCAAGTGGAGATGGGTCCCGTTCACTT
CTTCTGCCCGCTCTGACGGTGCAACCTTCGAGCACTGGCAGAAGGAGAAA
GAGGAGAAGGACAGCGCCGACTACGCCTACGCTAGGAGATGGGTCCCGTT
CACTTCTTCTGCCCGCTCTGACGGTGCAACCTTCGAGCACTGGCAGAAGG
AGAAAGAGGAGAAGGACAGCGCCGACTACGCCTACGCTAGGTATAACGTG
AAGGTGGACATCGACAACCACCTGAGATACACCGACGAGGAATACAAACA
GCACCTCACGGTATAACGTGAAGGTGGACATCGACAACCACCTGAGATAC
ACCGACGAGGAATACAAACAGCACCTCACGGACGCTGCGTGGACGAAGCT
AGAGACGGACCACGTGGTCACCCTGGCGCTCAAGTACGACCTGCGGTGGC
CGGTGGTGAAGGACCGCTACAAGCTGCTCCCCGACAGACCTGTGCAAGAG
TTGCAGCAGCGCTTTTACGACGTCGCCAACAGATTGCAGGACGCTGCGTG
GACGAAGCTAGAGACGGACCACGTGGTCACCCTGGCGCTCAAGTACGACC
TGCGGTGGCCGGTGGTGAAGGACCGCTACAAGCTGCTCCCCGACAGACCT
GTGCAAGAGTTGCAGCAGCGCTTTTACGACGTCGCCAACAGATTGCAGAC
GGTGAGGAGGACGGCGTCAAACGGCGCGGGTGGGGGGTCGCTGCTGACCA
TGCCGGGCCTGACTGCCTTCAACGCCACCCACGAGGCCGAGCGGCGGCAG
CAGCTGGAGGTAACGGTGAGGAGGACGGCGTCAAACGGCGCGGGTGGGGG
GTCGCTGCTGACCATGCCGGGCCTGACTGCCTTCAACGCCACCCACGAGG
CCGAGCGGCGGCAGCAGCTGGAGGTA
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