mRNA_L-elsbetiae_contig12619.2112.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: D7FXC8_ECTSI (SANT_DAMP1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC8_ECTSI) HSP 1 Score: 447 bits (1151), Expect = 1.600e-155 Identity = 221/246 (89.84%), Postives = 233/246 (94.72%), Query Frame = 1 Query: 1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV 738 MGDVADILGLGGP APSGRASPVLGGPLGPLQENKRGKGGAAP KK GKPQGVSREVYALLGSEGLPPEGPVSNPSLV+D +QQDP S+K QP SKW+WVPF+SSARSDGATFEHWQKE +EKDS DYAYARYNVKVDIDNHLRY+DEEYKQHLT+A+WTKLETDH+V +ALKYDLRWPV+KDRYK PDRPVQELQQRFYDVANRLQ VRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV Sbjct: 1 MGDVADILGLGGPPAPSGRASPVLGGPLGPLQENKRGKGGAAPIKKAGKPQGVSREVYALLGSEGLPPEGPVSNPSLVRDGSQQDPASSK-QPCSKWKWVPFSSSARSDGATFEHWQKESDEKDSGDYAYARYNVKVDIDNHLRYSDEEYKQHLTEASWTKLETDHLVAMALKYDLRWPVIKDRYKCTPDRPVQELQQRFYDVANRLQAVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV 245
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A6H5JTR5_9PHAE (SANT_DAMP1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTR5_9PHAE) HSP 1 Score: 429 bits (1104), Expect = 1.260e-150 Identity = 221/270 (81.85%), Postives = 232/270 (85.93%), Query Frame = 1 Query: 1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLT-------------------DAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQ-----TVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV 738 MGDVADILGLGGP APSGRASPVLGGPLGPLQENKRGKGGAAP KK GKPQGVSREV+ALLGSEGLPPEGPVSNPSLVKD +QQDP S+K QP SKW+WVPFTSSARSDGATFEHWQKE +EKDS DYAYARYNVKVDIDNHLRY+DEEYKQHLT +A+WTKLETDH+V +ALKYDLRWP +KDRYK PDRP QELQQRFYDVANRLQ TVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV Sbjct: 1 MGDVADILGLGGPPAPSGRASPVLGGPLGPLQENKRGKGGAAPIKKAGKPQGVSREVHALLGSEGLPPEGPVSNPSLVKDGSQQDPASSK-QPCSKWKWVPFTSSARSDGATFEHWQKESDEKDSGDYAYARYNVKVDIDNHLRYSDEEYKQHLTVSWRKWMFDFVEGFVGLYTEASWTKLETDHLVAMALKYDLRWPAIKDRYKCTPDRPAQELQQRFYDVANRLQVASHTTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLEV 269
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A835YGE4_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGE4_9STRA) HSP 1 Score: 162 bits (409), Expect = 5.150e-44 Identity = 105/260 (40.38%), Postives = 141/260 (54.23%), Query Frame = 1 Query: 1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGS--------------LLTMPGLTAFNATHEAERRQQLEV 738 MGDVAD+LG+ AP A LGG + K+G+ +K KP G+SREVYALLG +GLPP P PS AK +W WV F +SAR+D TF HW K + DYAYA+YNVK + + Y+D EY++ L + WT+ ETD ++ L ++DL WPV+ DR++ RPV+ LQ+RFYDV +L+ R AGGG LL PG AF+ +E +RR QL++ Sbjct: 1 MGDVADLLGVERAEAPDPLAL-ALGG------KTKKGE------RKAAKPVGMSREVYALLGEQGLPPSMPTKKPS------------AKGGGGVRWEWVEFANSARADNVTFFHWVKASAQH--PDYAYAKYNVKTEA---VTYSDGEYERLLRASDWTRAETDQLMRLCARHDLCWPVIADRFEARAARPVESLQERFYDVVAKLRAAR------AGGGKXXXXXXXXXXXIGGLLAAPGADAFDREYERKRRHQLDL 224
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A7S2S7D5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7D5_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.050e-36 Identity = 99/268 (36.94%), Postives = 135/268 (50.37%), Query Frame = 1 Query: 1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPP--EGPVSNPSLVKD-----SNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRR----------TASNGAGGGSL------LTMPGLTAFNATHEAERRQQLE 735 MGDV+DILG+ G PL L + G KT +P VSREVYAL+G +P G S L+ + Q K + KW+W P+ +SAR+DG F W K D DY YAR+NV++ + L YTDEEY+ HL D +WT+ +TD +V L +YDLRWPV+ DRY +P R +++LQ R+Y +A ++ VRR TA G L L + +N E ERR+QL+ Sbjct: 1 MGDVSDILGV------KKEKDDKKGVPLSALAGDS---GRRKKPAKTSRPPNVSREVYALMGFNAMPAGDAGDASTNPLLPSMAPAAGSMQGFKDKRSGIAQKWQWAPYQNSARTDGVEFSRWHKVG--VDYMDYPYARFNVRL---SKLEYTDEEYELHLQDPSWTRSDTDKLVALCARYDLRWPVIADRYNQIPRRSMEQLQHRYYTMAQKVLLVRRRIYEAEEDRDTAGLATGKDRLEAKAQALGVSLHVRYNLEFEMERRRQLD 254
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A6J1S6K2_FRAOC (DNA methyltransferase 1-associated protein 1-like n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1S6K2_FRAOC) HSP 1 Score: 141 bits (355), Expect = 8.820e-36 Identity = 91/249 (36.55%), Postives = 138/249 (55.42%), Query Frame = 1 Query: 1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALL--GSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRY--KLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQLE 735 MGDV DILGL P P +LG + K+ + + K + +P+G+ REV+ALL S+G+PP P K + + + V W+W+PFT+ R+DGA F HW++ +E +Y +A++N KV + + YTD+EY QHL WTK ET+H++ LA ++DLR+ V+KDR+ + DR V+EL++RFY + L VR T+ P F+A HE R++QL+ Sbjct: 1 MGDVQDILGLERPPTPELTKEAILGS----SDKLKKKQMQMSTPKVSKRPEGMPREVFALLCNDSKGVPPVFPTDTGQGYKQTKAK----LGMRKVRPWKWMPFTNPGRTDGAVFHHWRRVADE--GKEYPFAKFNKKVPVPS---YTDDEYNQHLQTTGWTKEETNHLIDLAKRFDLRFIVMKDRFDKEKFTDRSVEELKERFYTIQTTLTKVRSTSPPEG-------KP--YVFDADHERRRKEQLK 227
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: W1NFX0_AMBTC (Myb-like domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NFX0_AMBTC) HSP 1 Score: 140 bits (352), Expect = 2.320e-35 Identity = 99/245 (40.41%), Postives = 132/245 (53.88%), Query Frame = 1 Query: 1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQK-EKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQL 732 M D DILGL PS + KR K P + KP GVSREVYAL+G GLPP P + S +K + P S KE+ W+W+PFTSSAR+D HW K + DY++A+YN VDI +RYTDEEY+++LTD WTK ETD + L ++DLR+ V+ DR+ R +EL+ R+Y V+ L + S G L+ P +N THE ER++QL Sbjct: 1 MADAKDILGLPKTHFPS--------------TQEKRPK---PPKESQRKPDGVSREVYALMG--GLPPLMPTLDISQLK----RKPPSDKEK--ISWQWLPFTSSARTDNLKLYHWVKIVNGVPPTGDYSFAKYNKSVDI---VRYTDEEYEKYLTDPNWTKEETDQLFDLCEQFDLRFIVIADRFPT--SRSTEELKSRYYAVSRALVIAKAPPSGDVSGHPLVKDP----YNITHEVERKRQL 211
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A7R9Y843_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y843_9STRA) HSP 1 Score: 133 bits (334), Expect = 4.600e-35 Identity = 81/218 (37.16%), Postives = 121/218 (55.50%), Query Frame = 1 Query: 1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEEKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGA 654 MGDVA ILG+G A + + N+ G +K KP G+SREV++LLG+ GLP P + K + + + ++ KW+W F +SAR D + +HWQK E DY ++R+NV ++ + Y+DEEY + L +WT+ ETD+++ L +YDLRWPV+ DRY L P R V+++Q+R+YDV L R A+ A Sbjct: 1 MGDVAAILGMGANGAKDPKDA-----------SNQNKSTGRKRDRKAVKPAGMSREVFSLLGAGGLPSLAPAGD---AKGGHFKRRRVTGQE--GKWKWTTFKNSARGDKFSAKHWQKASVEY--PDYPFSRFNVSLES---VVYSDEEYDKVLASGSWTRSETDYLMILCQRYDLRWPVIADRYTLTPLRAVEDMQKRYYDVVRALILYRTEAAKAA 197
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A6H5K284_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K284_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.050e-35 Identity = 68/82 (82.93%), Postives = 70/82 (85.37%), Query Frame = 1 Query: 1 MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPE-------GPVSNP 225 MGDVADILGLGGP APSGRASPVLGGPLGPLQENKRGKGGAAP KK GKPQGVSREV+ALLGSEGLPPE GP+ P Sbjct: 1 MGDVADILGLGGPPAPSGRASPVLGGPLGPLQENKRGKGGAAPIKKAGKPQGVSREVHALLGSEGLPPEVCSVVCAGPLRGP 82
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A452ZPU4_AEGTS (Myb-like domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZPU4_AEGTS) HSP 1 Score: 135 bits (339), Expect = 6.880e-35 Identity = 91/243 (37.45%), Postives = 126/243 (51.85%), Query Frame = 1 Query: 7 DVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKEE-KDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQL 732 D DILGL S PS QE K AP + KP GVSREVYAL G G+ P P S +K + A E+ W+W+PFTSSAR+D HW + + DY +A+YN KVD+ L+YTDEEY+++LT+ W++ ETD + L ++DLR+ V+ DR+ R V++L+ R+Y V L R + + G L+ FNA HE ER++ L Sbjct: 46 DAKDILGLQKTSFPS-------------AQEKKP----RAPKEPQRKPDGVSREVYALTGGVGMAPLMPTIEASHLKR------RPAVEKEKVAWQWLPFTSSARTDNLQLYHWVRVVNNVPPTGDYDFAKYNTKVDV---LKYTDEEYEKYLTEPTWSREETDQLFELCQRFDLRFIVIADRFPTA--RSVEDLKSRYYSVTRALLIARARSFDEVAGNPLVK----ETFNAAHETERKRAL 256
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Match: A0A0D9WJ77_9ORYZ (Myb-like domain-containing protein n=2 Tax=Oryzinae TaxID=1648021 RepID=A0A0D9WJ77_9ORYZ) HSP 1 Score: 137 bits (345), Expect = 3.200e-34 Identity = 88/228 (38.60%), Postives = 126/228 (55.26%), Query Frame = 1 Query: 58 ASPVLGGPLG--PLQENKRGKGGAAPAKKTGKPQGVSREVYALLGSEGLPPEGPVSNPSLVKDSNQQDPKSAKEQPVSKWRWVPFTSSARSDGATFEHWQKEKE-EKDSADYAYARYNVKVDIDNHLRYTDEEYKQHLTDAAWTKLETDHVVTLALKYDLRWPVVKDRYKLLPDRPVQELQQRFYDVANRLQTVRRTASNGAGGGSLLTMPGLTAFNATHEAERRQQL 732 A +LG P G P + K+ + AP + KP GVSREVYAL G G+PP P S +K + A E+ W+W+PFTSSAR+D HW + + DY +A+YN K D+ L+Y DEEY+++LTD AW++ ETD + L ++DLR+ V+ DR+ DR V++L+ R+Y V L R + + G L+ FNA HE ER++ L Sbjct: 3 AKDILGIPKGVFPSVQEKKPR---APKEPQRKPDGVSREVYALTGGVGMPPLMPTIEASHLKR------RPAVEKEKVAWQWLPFTSSARADSLQLYHWVRVVNGAPPTGDYHFAKYNKKADV---LKYNDEEYEKYLTDPAWSREETDQLFELCERFDLRFVVIADRFPT--DRSVEDLKSRYYSVTRALLIARARSFDEVAGNPLVK----ETFNAAHETERKRAL 212 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12619.2112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12619.2112.1 >prot_L-elsbetiae_contig12619.2112.1 ID=prot_L-elsbetiae_contig12619.2112.1|Name=mRNA_L-elsbetiae_contig12619.2112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp MGDVADILGLGGPSAPSGRASPVLGGPLGPLQENKRGKGGAAPAKKTGKPback to top mRNA from alignment at L-elsbetiae_contig12619:240..4892- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12619.2112.1 ID=mRNA_L-elsbetiae_contig12619.2112.1|Name=mRNA_L-elsbetiae_contig12619.2112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4653bp|location=Sequence derived from alignment at L-elsbetiae_contig12619:240..4892- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12619:240..4892- >mRNA_L-elsbetiae_contig12619.2112.1 ID=mRNA_L-elsbetiae_contig12619.2112.1|Name=mRNA_L-elsbetiae_contig12619.2112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1476bp|location=Sequence derived from alignment at L-elsbetiae_contig12619:240..4892- (Laminarionema elsbetiae ELsaHSoW15)back to top |