mRNA_L-elsbetiae_contig12618.2111.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: D8LAS6_ECTSI (Flavin_Reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAS6_ECTSI) HSP 1 Score: 247 bits (630), Expect = 3.290e-77 Identity = 121/171 (70.76%), Postives = 141/171 (82.46%), Query Frame = 1 Query: 4 LSVPVFSLATINEDGSTNMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDTDKAARSAGEGFPWDLHQPLCQALSVPHSVEVVPDCTSYLTMHMVSKQPAGDHDAVICRIGSIAGPDEDNQASTSSESDTLETRHLREAGII 516 LSVPVFSLAT+NEDGSTNMNIVTYASPVGI+PERLWM+SL+K TLSYENFVREGWGV+QLL+R HAPLVP+LGQSGGRDTDKA R A + FPWD +P C +V ++P C SY+T+HMVSKQ AGDHDA+ICRIG+I GPDE + SS + LE+ HLR+AGII Sbjct: 105 LSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFVREGWGVMQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWD--EPSCM------NVAIIPGCGSYVTLHMVSKQSAGDHDAIICRIGNIFGPDE----AASSRLEVLESGHLRKAGII 263
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: A0A7S2RNZ4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RNZ4_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.570e-37 Identity = 81/196 (41.33%), Postives = 113/196 (57.65%), Query Frame = 1 Query: 4 LSVPVFSLATINEDGSTNMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDTDKAARSAGEGFPWDLHQPLCQALSVPHSVE------------VVPDCTSYLTMHMVSKQ--PAGDHDAVICRIGSIAGPDE---DNQASTSSESDTLETRHLREAGII*TEGRVNE 540 + VP ++LAT+ DG+TNMNI+TYA+P+ I+P+R+W I L+K TLS+ENF R G +LQLL H+ LVP LG + GRD DK A S FPW + +P+S E V+P C Y+ + +V + AG HD +C++ + D+ D+ AST + L T LRE GII +GRV E Sbjct: 31 IDVPTYALATVCRDGTTNMNILTYATPISIRPDRIWSIGLFKGTLSHENFQRTGRAILQLLDESHSKLVPSLGGTCGRDVDKRAESEKLNFPW---------VKLPNSSENDEKDELQQQPLVLPGCPHYIVLSLVDGKLIDAGSHDVALCKVDEMFVSDDCELDDTASTKASY--LSTNRLREKGIITEQGRVAE 215
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: B7G584_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G584_PHATC) HSP 1 Score: 142 bits (359), Expect = 3.300e-37 Identity = 83/192 (43.23%), Postives = 108/192 (56.25%), Query Frame = 1 Query: 4 LSVPVFSLATINEDGS--------TNMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDTDKAARSAGEGFPWDLHQPLCQALSVPHSVEVVPDCTSYLTMHMVSKQPAGDHDAVICRIGSIAGPDEDNQASTSSESDT----LETRHLREAGII*TEGRVNEK 543 L PVFSLAT++ DG+ TNMNI+TYA+PV + P+RLW+I LYK T++Y+NFV G LQLLR +HA L+PVLG GRDTDK GF W + P + P C+ YL + V AG HD IC++ G DN ++ +S T L T+ LR GII +GRV E+ Sbjct: 39 LDSPVFSLATVSPDGTLSTASPSTTNMNILTYATPVSMSPDRLWVIGLYKGTVTYDNFVASRRGTLQLLRPEHATLIPVLGGKSGRDTDKYNACKSLGFSWVASEMQSANNEEPWRL---PSCSCYLQLECVELCEAGSHDVAICKV---VGMQTDNSSNDDEDSGTRGTHLGTQALRSMGIITEQGRVAEQ 224
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: A0A7S2E2S7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2E2S7_9EUKA) HSP 1 Score: 140 bits (354), Expect = 2.180e-36 Identity = 80/184 (43.48%), Postives = 112/184 (60.87%), Query Frame = 1 Query: 4 LSVPVFSLATINEDGSTNMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDTDKAARSAGEGFPWDLHQPLCQALSVP-HSVEVVPDCTSYLTMHMVSK-QPAGDHDAVICRIGSIAG-PDEDNQASTSSESDTLETRHLREAGII*TEGRVNEKA 546 L+ PVFSL+T+N DG+TNM I+TYA+PVGI P+R W +SLY+ TL++ NF ++ G+LQ+L HA +V LG G D+DKAA A GF W + P ++ P S ++P C+ YL + V + QP G+HD IC + + G P ED + + L T HLRE G+I G+ E A Sbjct: 54 LNSPVFSLSTLNADGTTNMQILTYATPVGIGPKRTWGVSLYRPTLTHANFCKQRSGILQVLCEPHAAIVFALGGKSGNDSDKAAACAAAGFEW-IKPP--ESWGGPTRSPLLLPGCSRYLRLSQVGELQPCGEHDLAICAVEDMLGLPPEDELRAVA-----LSTAHLRELGLISDRGKAIEPA 229
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: A0A8J2SL81_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL81_9STRA) HSP 1 Score: 142 bits (357), Expect = 4.720e-36 Identity = 85/190 (44.74%), Postives = 111/190 (58.42%), Query Frame = 1 Query: 4 LSVPVFSLATINEDGSTNMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDTDKAARSAGEGFPWDLHQPLCQALSVPHSVEVVPDCTSYLTMHMVSKQ-PAGDHDAVICRI-GSIAGPDEDNQASTSSESDTLETRHLREAGII*TEGRVNEKAPSKTLFP 567 L PV+SLAT++E G TNMN+VTYA+PVGI+PER W +SL+K T+S NF R GVLQLLR +HAPLV LG + D DKAA G GF W+ S V+P C +Y+++ V + GDH+ +CR+ +AG D AS ++ D LRE G+I TEGR +AP P Sbjct: 60 LDGPVYSLATLDEAGDTNMNVVTYATPVGIRPERRWALSLFKSTVSRANFARRRRGVLQLLRPEHAPLVYALGGTSAADADKAAACYGAGFAWE---------SSDWDERVLPRCAAYVSLEAVGEPVDCGDHEVYVCRVVDGVAGFD----ASHATTGD------LRERGLITTEGRA--RAPGDVPAP 228
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: A0A7S2Y493_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y493_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.860e-34 Identity = 79/184 (42.93%), Postives = 104/184 (56.52%), Query Frame = 1 Query: 4 LSVPVFSLATINED---GSTNMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDTDKAARSAGEGFPWDLHQPLCQALSVPHSVEVVPDCTSYLTMHMVSKQ--PAGDHDAVICRIGSIAGPDEDNQASTSSESDTLETRHLREAGII*TEGRVNE 540 L VP +SLAT ++ ++NMNI+TYA+PV I+P+RLW + L+ TL+Y+NF GVLQLLR HA LV VLG S GRD DK + G+PW + P S P E++PDC YL M +V + G H IC++ S+ D + L T LRE GII +GRV E Sbjct: 20 LDVPTYSLATCQDNDHNNTSNMNILTYATPVSIRPDRLWSLGLFHDTLTYQNFAATKQGVLQLLRPCHAELVKVLGGSSGRDVDKQSECETLGYPW-IKAPAEWGESAP---ELLPDCVCYLQMSLVGENLIDCGSHSVAICKVESMWTSKNDEEPEDVPH---LHTARLREMGIITPQGRVAE 196
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: A0A7S4PWJ3_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PWJ3_9DINO) HSP 1 Score: 130 bits (327), Expect = 5.020e-32 Identity = 79/181 (43.65%), Postives = 102/181 (56.35%), Query Frame = 1 Query: 4 LSVPVFSLATINEDGSTNMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDT--DKAARSAGEGFPWDLHQPLCQALSVPHSVEVVPDCTSYLTMHMVSK-QPAGDHDAVICRIGSIAGP-DEDNQASTSSESDTLETRHLREAGII*TEGRV 534 L+VPV+SLAT++ G TNMNI+TYASPVGI+P R W ISLY+ T S+ NF+ GVLQLL HAPLV +LG D DKA EGF W + + + L +P C +YL + + + AGDHD ICR+ I P ED +AS + T LR G++ GR Sbjct: 87 LNVPVYSLATLDSTGKTNMNILTYASPVGIRPARAWCISLYRKTQSHRNFIERRSGVLQLLGESHAPLVYLLGGQSSEDAGVDKAEGCRAEGFEWVSQEGVEEML--------LPRCRAYLRLVLEGEVTDAGDHDVAICRLDQILYPVHEDMEAS-------MGTDFLRARGLVSEVGRA 252
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: B8BV75_THAPS (Flavin_Reduct domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV75_THAPS) HSP 1 Score: 125 bits (314), Expect = 1.140e-30 Identity = 79/191 (41.36%), Postives = 105/191 (54.97%), Query Frame = 1 Query: 4 LSVPVFSLATIN----EDGST---NMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDTDKAARSAGEGFPWDLHQPLCQALSVPHSVE------VVPDCTSYLTMHMVSKQ-PAGDHDAVICRIGSIAGPDEDNQASTSSESDTLETRHLREAGII*TEGRV 534 + VP +SL+T+ +DGS+ MN++TYA+P+ I+P R+W ISLYK T+++EN+ RE GVLQLL HA L+ LG S GRD DK A A GF W+ L S E V+P C YL + MV G H+ +CR+ + +D + E D L TR LRE GII GRV Sbjct: 30 IDVPTYSLSTLGVDNGDDGSSVTSTMNVLTYATPISIQPFRMWSISLYKGTITHENWTRERRGVLQLLGPCHAELIRTLGGSSGRDVDKRAICAQLGFDWES----LDVLDGEESDERVQWPLVLPSCLYYLQLEMVGDLIDCGSHEVALCRVVKMIA--DDGVQVAADELDCLNTRKLREMGIISEFGRV 214
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: A0A7S4NG52_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NG52_9EUKA) HSP 1 Score: 120 bits (302), Expect = 3.680e-29 Identity = 72/178 (40.45%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 4 LSVPVFSLATINEDGSTNMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDTDKAARSAGEGFPWDLHQPLCQALSVPHSVEVVPDCTSYLTMHMVSKQP-AGDHDAVICRIGSIAGPDEDNQASTSSESDTLETRHLREAGII*TEGRV 534 L+ PVF+LAT++ G+TNMNI+TYA+PVGI P R W+ISL++ T ++ NF R GVLQLLR HA LV LG S RD DK GF W A H ++PDC +Y + + AG+HD +C + + PD D + ++ L+TR R G++ GR Sbjct: 27 LNNPVFALATVDATGATNMNILTYATPVGIGPRR-WVISLFRKTETHGNFCRRRTGVLQLLRPCHAALVHTLGGSSARDVDKETACRELGFEW--------ARFDGHDELLLPDCAAYYRLTLDGDVTNAGEHDVALCLLDGVFVPDADVGPADAA----LDTRECRALGLVSDAGRA 191
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Match: A0A6U3UK22_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UK22_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.440e-28 Identity = 76/200 (38.00%), Postives = 104/200 (52.00%), Query Frame = 1 Query: 4 LSVPVFSLATINEDG-----------STNMNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLVPVLGQSGGRDTDKAARSAGEGFPWDLHQPLC---------QALSVPHSVEVVPDCTSYLTMHMVSKQ-PAGDHDAVICRIGS--IAGPDEDNQASTSSESDTLETRHLREAGII*TEGRV 534 L+VP +SLAT +T MNI+TYA+P+G P R W ISLYK +LS++NF + G+G+LQLL ++H PLV LG + GRD DK GFPW C Q +PH V+P C SYL + + G H ICR+ I G +E+ +++ L T +LR+ G+I GRV Sbjct: 61 LNVPTYSLATTXXXXXXXXXXXXXTTATTMNILTYATPIGATPYRTWAISLYKNSLSHDNFCKTGFGILQLLTKRHVPLVRYLGGASGRDVDKKEICEKIGFPWQPVSVDCKEEKILDEKQQRELPH---VLPHCKSYLLLSQQGELIDVGSHTVAICRVEDMLIVG-EEEXXXXXXDQTEILMTAYLRKLGLITNLGRV 256 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12618.2111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12618.2111.1 >prot_L-elsbetiae_contig12618.2111.1 ID=prot_L-elsbetiae_contig12618.2111.1|Name=mRNA_L-elsbetiae_contig12618.2111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp MNIVTYASPVGIKPERLWMISLYKVTLSYENFVREGWGVLQLLRRKHAPLback to top mRNA from alignment at L-elsbetiae_contig12618:2745..5032- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12618.2111.1 ID=mRNA_L-elsbetiae_contig12618.2111.1|Name=mRNA_L-elsbetiae_contig12618.2111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2288bp|location=Sequence derived from alignment at L-elsbetiae_contig12618:2745..5032- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12618:2745..5032- >mRNA_L-elsbetiae_contig12618.2111.1 ID=mRNA_L-elsbetiae_contig12618.2111.1|Name=mRNA_L-elsbetiae_contig12618.2111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=924bp|location=Sequence derived from alignment at L-elsbetiae_contig12618:2745..5032- (Laminarionema elsbetiae ELsaHSoW15)back to top |