|
Homology
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: A0A835ZAH9_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAH9_9STRA) HSP 1 Score: 182 bits (461), Expect = 8.700e-53 Identity = 95/196 (48.47%), Postives = 126/196 (64.29%), Query Frame = 3
Query: 3 NVPMFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYVPNYSGYVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEP--PPAGSDLAAKLEELHGRTRGLARGVIEPVMSQVVDRYGEMP--ADAEAFSLWITSILPMQLREKHTLLSSNSTTARLLACERHLISLNGGAP 578
NVPMFPGE L LHLFEPRY+LMM+RI++T+RRF YVPNY+ Y AS GDVALIA++ +C+F SDGR L A L R +TDH+VE GT GL+YC+L+ DEP P + ++ + V+ P+ S VV +GEMP A + FSL+I +LP+ EKH++L+ +T RL AC L + G P
Sbjct: 70 NVPMFPGEILSLHLFEPRYRLMMRRIIDTTRRFVYVPNYTNYEASIGDVALIAEVKDCDFQSDGRCYLSATLIGRSRITDHYVEDGTHGLNYCQLETLVDEPIQPHEARFVTTLVQPI----ANFVSSVLGPIHSDVVKTHGEMPPVAREQEFSLFIAGVLPLGNAEKHSMLACTNTLERLRACAAALGRMGGDNP 261
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: A0A4D9DDG8_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDG8_9STRA) HSP 1 Score: 176 bits (447), Expect = 6.980e-50 Identity = 98/196 (50.00%), Postives = 127/196 (64.80%), Query Frame = 3
Query: 3 NVPMFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYVPNYSGYVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVT-DHFVEGGTQGLHYCRLQARSDEPPPAGSDLAAKLEELHGRTRGLARGVI---EPVMSQVVDRYGEMPADA--EAFSLWITSILPMQLRE-KHTLLSSNSTTARLLACERHLISLNG 569
N+P+FPGE L+LHLFEPRY+LMM+RIVN SRRFAYVPNYS Y A GD+ALIA+L E F+ DGR L A++ R T+ D +VE GT GL YCRL+ DE P + ++ + L + + R +A + + + VVDRYGEMP EA SLWI ++LP + R+ KH LL S T+ RL C L +L G
Sbjct: 186 NLPIFPGEALRLHLFEPRYRLMMQRIVNGSRRFAYVPNYSNYRAKAGDIALIAELKEVRFMRDGRSELEARIAGRFTIAEDPYVEDGTGGLSYCRLKELRDESPKS-AEASQALRQASEKAREMAHAIFLERRDIKAVVVDRYGEMPGPQTPEALSLWIAAVLPTENRQIKHDLLVSTDTSHRLEVCMSKLQALRG 380
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: D8LI81_ECTSI (Lon N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI81_ECTSI) HSP 1 Score: 167 bits (423), Expect = 3.800e-47 Identity = 87/188 (46.28%), Postives = 115/188 (61.17%), Query Frame = 3
Query: 3 NVPMFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYV--------PNYSGYVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEPPPAGSDLAAKLEELHGRTRGLARGVIEPVMSQVVDRYGEMPADAEAFSLWITSILPMQLREKHTLLSSNSTTARLLAC 542
NVP+FPG+TL +H FEPRYKLMM+RI+NTSRRFAYV N G +AL A + E EFLSD RV++ KL R TV + FVE GT LHYC+L+ D+P G A +LE+LH R + + G + P Q+V+ +G MP DA S+W+ S+LP +KH+L+ S T R+ C
Sbjct: 38 NVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVQSTNNDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVEDFVEAGTGDLHYCQLEPFDDDPLQDGG--ADELEDLHTRAKTMCNGFLGPFKGQLVEAHGRMPEDAVGLSMWMASLLPFYPPDKHSLVRSRCTRRRMRTC 223
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: A0A6H5KHS7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS7_9PHAE) HSP 1 Score: 164 bits (416), Expect = 3.130e-45 Identity = 86/188 (45.74%), Postives = 117/188 (62.23%), Query Frame = 3
Query: 3 NVPMFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYV-----PNYSG---YVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEPPPAGSDLAAKLEELHGRTRGLARGVIEPVMSQVVDRYGEMPADAEAFSLWITSILPMQLREKHTLLSSNSTTARLLAC 542
+VP+FPG+TL +H FEPRYKLMM+RI+NTSRRFAYV P+ + G +AL A + E EFLSD RV++ KL R TV + FVE GT LHYC+L+ D+P G A +L +LH R + + G + P Q+V+ +G MP DA S+W+ S+LP +KH+L+ S T R+ AC
Sbjct: 122 SVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVPSTNDDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVEDFVEAGTGNLHYCQLEPFDDDPLQEGG--AGELTDLHTRAKTICNGFLGPFKGQLVEAHGRMPEDAVGLSMWMASLLPFYPPDKHSLVRSRCTRRRMRAC 307
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: A0A6U2J5U5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2J5U5_HEMAN) HSP 1 Score: 147 bits (371), Expect = 1.610e-39 Identity = 78/183 (42.62%), Postives = 115/183 (62.84%), Query Frame = 3
Query: 3 NVPMFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYVPNYSGYVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEPPPAGSDLAAKLEELHGRTRGLARGVI---EPVMSQVVDRYGEMPADAEAFSLWITSILPMQLREKHTLLSSNSTTARLLAC 542
N +FP L L+LFEPRYK+M+ RIV +SRRFAY+P + Y A+ GD+ +IA++++ EFL+DGR L AK R T+ + ++E GTQGLH+C++ +D + S+ A LEE L V+ + ++ +YG PAD+E FS W++SILP+ +KH LL+ +TT RL C
Sbjct: 107 NDTLFPFSPLALNLFEPRYKVMLHRIVESSRRFAYLPKFDTYQANVGDMGVIAEITDIEFLADGRAHLQAKCRDRFTIKEAWIEDGTQGLHWCKVDLVNDGVSASESERQA-LEEAVSDCEQLFASVMARSSHLAREIESQYGSRPADSERFSFWLSSILPVPYGDKHCLLTCLNTTERLTLC 288
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: A0A482RY16_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY16_9ARCH) HSP 1 Score: 140 bits (353), Expect = 5.400e-37 Identity = 74/156 (47.44%), Postives = 100/156 (64.10%), Query Frame = 3
Query: 3 NVPMFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYVPNYSGYVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEPPPAGSDLAAKLEELHGRTRGLARGVIEPVMSQVVDR-YGEMPADAEAFSLWITS 467
N +FPG L L LFEPRYKLMM+RI++T+R FAYVPN++ Y A GDVAL+ +L E EFL+DGR LL L SRQ + +H+VE GTQGLHYCRL++ D+ G + + L + R L + +++++ G P D E FSLW+ S
Sbjct: 130 NSILFPGNKLSLVLFEPRYKLMMRRIIDTTRSFAYVPNFTNYHARVGDVALVVELKEVEFLADGRCLLEGLLVSRQRIAEHYVEQGTQGLHYCRLESLRDDG--LGEQRRQQADYLSQQLRTLLASLGGGSSRRLLEQGLGSPPQDLENFSLWLLS 283
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: A0A7S0CSC1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSC1_9EUKA) HSP 1 Score: 132 bits (333), Expect = 1.220e-33 Identity = 74/182 (40.66%), Postives = 109/182 (59.89%), Query Frame = 3
Query: 3 NVPMFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYVPNYSGYVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEPPPAGSDLAAKLEELHGRTRGLARGVIEPVMSQVVDRYGEMP--ADAEAFSLWITSILPMQLREKHT---LLSSNSTTARL 533
N +FPG L LHLFE RY+ M+ R V+++R+F Y+PN+S Y A+ GDV L+A + ECEFLSDGR LL A L R +T+ +VE GTQGLHYC+ QA + A ++E+H + + + + Q+V+ G+ P ++A FS WI++++ M R + LL + T RL
Sbjct: 123 NNCLFPGCLLHLHLFEQRYRHMINRCVSSNRQFLYLPNFSDYKATAGDVGLLAYVDECEFLSDGRALLKATLVKRVVITNSWVEEGTQGLHYCQYQAYEETDKTVKE---ADVKEIHAKVNVILQSA-PGLREQIVNHIGKQPPISNATQFSFWISALVTMITRAGKSGMPLLKTTKTAERL 300
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: A0A6B2LCC5_9EUKA (RING-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCC5_9EUKA) HSP 1 Score: 122 bits (305), Expect = 8.520e-30 Identity = 72/187 (38.50%), Postives = 103/187 (55.08%), Query Frame = 3
Query: 3 NVPMFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYVPNYSGYVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEPPPAGS--DLAAKLEELHGRTRGLARGVIEPV----MSQVVDRYGEMPADAEAFSLWITSILP----MQLREKHTLLSSNSTTARL 533
N +FPG L+LHLFE RYKLM+KR++ +R+F Y+PN++ Y AS GDV ++A++ EC FL DGR LL A++ R V D +VE GT L YC+ + DEP +L R +G + +EP+ + + + + E + EA S W+ + L M K LL SNS RL
Sbjct: 94 NDTLFPGGVLKLHLFEERYKLMIKRVLEGNRKFVYLPNFTNYKASKGDVGVVAEVLECRFLHDGRALLQARIVERAVVADSWVEDGTGNLAYCQYELFKDEPENDDQLQELLVTANLSLERFKGFVQR-LEPIRQFTLKEQLGGFPEERSTPEAISWWLINTLSRFDGMSTSTKVALLKSNSFKWRL 279
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: A0A7S0W860_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W860_9CRYP) HSP 1 Score: 114 bits (286), Expect = 1.560e-28 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 3
Query: 12 MFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYVPNYSGYVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEPPP----------AGSDLAAKLEELHGRTRGLARGVIEPVMSQVVDRYGEMPADAEAFS 452
+FP L L+LFEPRYK+M+ RIV +SRRFAY+P + Y A+ GD+ +IA++++ EFL+DGR L AK R T+ + ++E GTQGLH+C++ +D A SD + R+ LAR ++ +YG PAD E FS
Sbjct: 3 LFPFSPLALNLFEPRYKVMLHRIVESSRRFAYLPKFDTYQANVGDIGVIAEITDIEFLADGRAHLQAKCRDRFTIKEAWIEDGTQGLHWCKVDLVNDGESADEAERRTLQEAVSDCDQLFASVIARSSHLAR--------EIESQYGSRPADPERFS 151
BLAST of mRNA_L-elsbetiae_contig1261.2107.1 vs. uniprot
Match: L1JVD8_GUITC (Lon N-terminal domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JVD8_GUITC) HSP 1 Score: 117 bits (293), Expect = 2.930e-28 Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 3
Query: 3 NVPMFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYVPNYSGYVASNGDVALIAQLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEPPPAGSDLAAKLE 344
N ++P L LHLFEPRYK+M+KRIV SR+FAY+P Y AS GDV +IA+LSE EFL DGR + AK R + D +VE GTQGLH+C+++ DEP + +D+ E
Sbjct: 44 NDTLYPYSPLVLHLFEPRYKIMIKRIVQASRKFAYLPCMHSYQASVGDVGVIAELSEVEFLPDGRAHVQAKCRDRFRILDTWVEDGTQGLHWCKVEIIHDEPVESHADVQVSQE 157
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 159.1 |
Seed ortholog evalue | 2.6e-36 |
Seed eggNOG ortholog | 2880.D8LI81 |
KEGG ko | ko:K20779 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000122,GO:0000151,GO:0000209,GO:0001775,GO:0002200,GO:0002204,GO:0002208,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002312,GO:0002366,GO:0002376,GO:0002377,GO:0002381,GO:0002440,GO:0002443,GO:0002449,GO:0002460,GO:0002520,GO:0002562,GO:0003674,GO:0003682,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006302,GO:0006310,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006955,GO:0006974,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010212,GO:0010390,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010629,GO:0016043,GO:0016064,GO:0016444,GO:0016445,GO:0016447,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019724,GO:0019787,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031491,GO:0031593,GO:0031974,GO:0031981,GO:0032182,GO:0032446,GO:0032501,GO:0032502,GO:0032784,GO:0032785,GO:0032879,GO:0032880,GO:0032991,GO:0033522,GO:0033554,GO:0034243,GO:0034244,GO:0034641,GO:0034644,GO:0035518,GO:0035861,GO:0036211,GO:0036351,GO:0036352,GO:0042113,GO:0042393,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045190,GO:0045321,GO:0045739,GO:0045892,GO:0045934,GO:0045935,GO:0046483,GO:0046649,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051276,GO:0051603,GO:0051716,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070530,GO:0070534,GO:0070535,GO:0070647,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090734,GO:0104004,GO:0140030,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1903827,GO:1990234,GO:1990391,GO:2000112,GO:2000113,GO:2001020,GO:2001022,GO:2001141 |
EggNOG free text desc. | histone H2A-K13 ubiquitination |
EggNOG OGs | COG2802@1,KOG4159@2759 |
EC | 2.3.2.31 |
COG Functional cat. | I |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko01000,ko03400,ko04121 |
Ec32 ortholog description | Zinc finger, C3HC4 RING-type |
Ec32 ortholog | Ec-19_001490.1 |
Exons | 5 |
Model size | 719 |
Cds size | 708 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815452.711763-CDS-L-elsbetiae_contig1261:21724..21852 | 1622815452.711763-CDS-L-elsbetiae_contig1261:21724..21852 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 21725..21852 - |
1691682904.973889-CDS-L-elsbetiae_contig1261:21724..21852 | 1691682904.973889-CDS-L-elsbetiae_contig1261:21724..21852 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 21725..21852 - |
1622815452.7802575-CDS-L-elsbetiae_contig1261:22579..22772 | 1622815452.7802575-CDS-L-elsbetiae_contig1261:22579..22772 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 22580..22772 - |
1691682904.9871478-CDS-L-elsbetiae_contig1261:22579..22772 | 1691682904.9871478-CDS-L-elsbetiae_contig1261:22579..22772 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 22580..22772 - |
1622815452.7936108-CDS-L-elsbetiae_contig1261:24340..24571 | 1622815452.7936108-CDS-L-elsbetiae_contig1261:24340..24571 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 24341..24571 - |
1691682904.9964101-CDS-L-elsbetiae_contig1261:24340..24571 | 1691682904.9964101-CDS-L-elsbetiae_contig1261:24340..24571 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 24341..24571 - |
1622815452.809553-CDS-L-elsbetiae_contig1261:25809..25879 | 1622815452.809553-CDS-L-elsbetiae_contig1261:25809..25879 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 25810..25879 - |
1691682905.005488-CDS-L-elsbetiae_contig1261:25809..25879 | 1691682905.005488-CDS-L-elsbetiae_contig1261:25809..25879 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 25810..25879 - |
1622815452.8233333-CDS-L-elsbetiae_contig1261:27439..27525 | 1622815452.8233333-CDS-L-elsbetiae_contig1261:27439..27525 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 27440..27525 - |
1691682905.0157347-CDS-L-elsbetiae_contig1261:27439..27525 | 1691682905.0157347-CDS-L-elsbetiae_contig1261:27439..27525 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1261 27440..27525 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815452.834671-UTR-L-elsbetiae_contig1261:27525..27536 | 1622815452.834671-UTR-L-elsbetiae_contig1261:27525..27536 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1261 27526..27536 - |
1691682905.0252292-UTR-L-elsbetiae_contig1261:27525..27536 | 1691682905.0252292-UTR-L-elsbetiae_contig1261:27525..27536 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1261 27526..27536 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1261.2107.1 >prot_L-elsbetiae_contig1261.2107.1 ID=prot_L-elsbetiae_contig1261.2107.1|Name=mRNA_L-elsbetiae_contig1261.2107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
MFPGETLQLHLFEPRYKLMMKRIVNTSRRFAYVPNYSGYVASNGDVALIA QLSECEFLSDGRVLLVAKLTSRQTVTDHFVEGGTQGLHYCRLQARSDEPP PAGSDLAAKLEELHGRTRGLARGVIEPVMSQVVDRYGEMPADAEAFSLWI TSILPMQLREKHTLLSSNSTTARLLACERHLISLNGGAPPALAGRRDAAA VAEDFERQVAAGESEESLAALVAGGPAGAAARGVDP back to topmRNA from alignment at L-elsbetiae_contig1261:21725..27536- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1261.2107.1 ID=mRNA_L-elsbetiae_contig1261.2107.1|Name=mRNA_L-elsbetiae_contig1261.2107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5812bp|location=Sequence derived from alignment at L-elsbetiae_contig1261:21725..27536- (Laminarionema elsbetiae ELsaHSoW15) ACAACGTGCCGATGTTTCCGGGAGAGACTTTGCAGCTGCACCTGTTCGAG
CCCCGATACAAGCTCATGATGAAGCGGATCGTTAACACGTCTCGAAGGTA
ATGTGTGTTATGTTGTTGCTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTT
TTTTCTCACATTAGCTCTCTCGTCCAAAACATCCTTGTATGTAGGTTGTA
CACATGTAGACTATACCGTAATCATGCGGGCCATCGCCCCCCCCCCCCCC
CCCCCCCCCTTATCTCTTTGTTCTTTTGTGCTACCGTCTCTTTATTGTTC
GTCGTTGTTTTTATTTCTTTTCATTCTTCGCTCCCTTCTNNNNNNNNNNT
TCTCTCTCGTCCAAAAAATCCTTTTTTTTAGGTTGCACAAATGTTAACTA
TCCCGAAATCGTTGGGGCCAGCGCCCCCCCCCCCCCCCCCGGCTTTATTG
GCTGTTTGATTGTTAGACCGTTCGCATTTATTTGGCCCGTTGTTGTCTTT
CGCCTTCTGTCACCGGCCCTTTTGCCCCATTTGCCTTCCCCCCGCTGACG
GTGATCCTGGACCCCCCCCCGTGGGCCTGCTGTTTCTGGCCCCCCATGGT
GTTTGTTTTCAGTGTTAGTAGGTTTAAGCCCAACCCTCGCTTGCCTGGCA
CACCTGGATCCCGACAAACTCGGGGAGCACGGGGGGGGAGCCTAGGGCCG
TGTACGTAGAGTCCCTTCGCGTCTTTCGGCAGGGCCTGCCTCCGCGCACA
ATAACTGAGATGGACATTGCCGTCTACGCTGAAACGCCAAAAAGGCCCGC
GCACCTGATTTTGTTTTGTGTCTGGCGCACCAAGTTACGAGGGGAGGGTG
CGGTTGCGTTTTTTTTTTCTTCTTAATATTTATTTCCAGTGCTCGATGGG
CTCCTTGTCACGAGGACATCTTGCCAGGTTAGTGAACCGTGGTGACACAG
AAGGGTTCCCTTCCCCAAGGCCCCTCCCACTGCCCCCGTCTGCGGTGCTT
GCCTAAGATTTTTGTCGCGAGAAGGGCTCAGCCGTCCCTTTCCCTCGTCG
TCGACGGTGAGGTCGAAGTTTCGGTCGTTAATAACCCGGCACATAACCCC
ACCTGGAAGTAGATCTAACAGATGAGGTGGGGTGAGGGTGGGGTGGAGAA
TATCCCGTGGACCCCCCTGGCTTTGCTTCCTCCTCCTACAATATGATGTT
CCTTGTGGTCACCTTTTTTTTTTCAATAAATATGCCATCATTTCATTTTT
TGCTCGGGGACATAGACACGTAGTAAACACGGGAGATCCTCCGCTCCTGT
GAGACTCCGTGTCTTTTTCACTCGACCTAAATATGACGTTGTGTGCGCTT
CGTGTCTCCTTTGCATCCAGCGTTTTGGTGCGTTCCTCCTACCACTTGGT
GAGTGCCGAGTTTTGGAATAGTGAAGGAAACAACATTTACGCAAAACGTT
GCGTCTCCTATTCCGCGATCTGTCTGTCCCCCAATGTTTCACGTTTGCGC
CTATTCATTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCNNNNNNNNNTGCTGCTTCCTTTTCCGCTTCTTTTTCTCCCCCCTTTT
TTTTCTTTTTCTCTTTTTTTTTTTCCCTCCCCCCCCCCCCCCCCCCCACT
CCCACAGATTCGCGTACGTCCCCAACTACTCGGGCTACGTGGCGTCCAAC
GGGGACGTGGCACTGATAGCGCAGCTGGTGAGTCACGCGAGCGATAGTTC
ACGCTCGCAGCACGTTGCTGCTGCTGCTGCTGCTGCTGGTGCATGTCTCA
CGCTGCCTTCAGCTGTTTTTCGACGACCGTCTTGGGGTCCTCGGCTTTAA
AATGGGCTGAAAGAGCCTCGAGAGGAGGCCCAAAAAACCCTGTTGTACAA
TACACCATACCTATGGTATAGACTTCCTGTATTAGAGCCCCCAGTTCTCA
AAAATAGCTGTGGGGGGAGCGGGGGGGGGGTATTTATCCAGGAAATAGAG
TTAAAAATCCCCCACCGCGGTCACTTTTCCAGAATTAGGGGGCCCTGCTG
CAGGAAGCCTATGGTATAGTGTAGGTGGAAAGCGGCACACGAGACAAGGC
AGGGCCGAATACGGCATCTCCTGTGCCCCGCTCACTTCCCGCTCCTTCCT
TCTGACGTGTGCAAGTGGTGATGGAAAGGGTTTGCATCTGACCTATATCT
GCACTGCCGCGCGTGTATCCCAGTCGGCAAGCAGTCTGCGGTGGGCAGTT
GGTTCCGTGTTTTCTGTTTTAAAACCATCGTCACAACACAGAAAATACCA
CACCTCTGGGTATTGTATGTATTACCCCAACTTACTCGAATCCTCGTCTG
AGTATATATATGGTAAGTACCTCGGTATCCAAACGACAATATAATATAAA
AAACCTAGAATCAGACCTTGAAATGGGGTTTCGGCAGAGCGGGATAGTGC
TTTGTATGTATGTATATGCGAAAATACCCTTTGTTTTGTTGCTTGTGGCC
GAAAACTGAAACTAGCCGACGACAACAACAACAACAAACAGACAGTCACG
GCGACGGACGATTGCACCTCTCCAAGGCCACCTGTAATAACCCTACAGCA
GTTCAATCGCCTGCGTTGTTTTTATGTGCACACTGATTGTCCATTTTATA
AAAATAAACAATGAGTCAAAGATGGAACATACCCCCACACTAGAGCAAGG
ACTCAATATGGGGTTCAAACGGTATTCCATGTACAGTGACGTAACATTTG
GCGAAGCGAGCAGAAAAACAACCCAAAATATCAGAAGAGTTCAACATCTC
CCCTGCAAAGATTTGCGAGGTCGGCCAACGAAAAACGGACACCACTACTA
CTGTTGCAGATACTAAATACTAGAAGTAATGATTAACAACGCGAGTGACT
AAAAAAAATCTCTTCTCCGCTGCTGCTTTTCGTCGAACAAACCCCGTGAA
CAAAAAACGCGACAGTCCGAGTGCGAATTCCTCAGCGACGGAAGAGTGCT
GCTCGTGGCCAAGCTCACCTCTAGACAGACGGTCACCGATCACTTCGTGG
AGGGGGGGACCCAGGGGCTGCACTACTGCCGCCTCCAGGCCCGCAGCGAC
GAGCCCCCCCCGGCCGGGAGCGACCTCGCCGCGAAGCTGGAGGAGCTCCA
CGGGAGGACAAGAGGGCTGGCTCGTGGCGTCATCGAGCCCGTCATGGTGC
GTTTCTTAACAAATAACGATCGTTCTTGTGTAGCGATTTCGTCGGTAAAT
ATTATTTCGCCTTTATTGTTGACGAGGGTGGGGAGTAGTGCTGAACCCTG
CTCGCGATAAAAGCATCTAAGGCGGGCACCGCAGGAGGGGGTCCAACCCC
CCCCCCCCCTCCTGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTAATG
GAGGAAGGGGGTCAGTGGGGCAGACGACAAAAGATGGAAGAAAATAAATA
AATAAATATATATCATTGTACCCACAAACATACAAAACGTACGGATTTTG
TGCGAGTATATCTTGGACCGGAAATGGGGGGGTTAGTTAGTATGCCTACA
ACAGTCCCTCTCGAACGACTTTTTCTCAGACAGGACGTGGACTGCTGCTG
ACATTTGCATACATTAATTAAAACGTCGGGGATAGTATTTATGTGAAACA
AAGTAATTCCAGGGCGACCGGTTGTAGACACGCTATTTAGTTACCGTAAT
TATGCGGGTTATCGCATCCCCGTGTTCGCGTTTTTCTATGGCGTATTTCT
CCACAACCAGGAGGGTACCACTGCCGAAAACGGTGGTTTTCGAAACTTCT
GGTCGGGGGTTTTCCAGAGAGGTACCAGTTAGTGTCCGCACCCTCCTGGT
TGTGGAAAAATACGCTGTAGATAAACGCTTAACGCGGGGGTGCATGATTA
CGGTAATCCTTCCTCGCCGCCTCCGACTTTTGAATTAATATGCGTGCGTG
TAAATACTCGAGTGATCTTCGGAGAAGTGGGGGTAAAATGCAGACAGATG
CGGGTAATACATATTTAGATAAAAATTGTGGAGTTGGAGGGGTACATCCA
TTCCCCGGGACATAGGACAAACGGGGGCATGCTGCTGAGCTTATTTGTTT
TCGAAACAAAAAACACGGAGTAGAGCGTACCATAATCTGGTAGGCGGTTA
GGGCTCGCCTTTCGTGGTGCAATACCGTAGGTGACACCAGATACCACACC
CCCTGGACAGATTTTCAAAGCTCGATTCCTCCTCAGCAAGAAGAGAGCCA
GTGCCGAAAGAGGTGGCATTGGAAAGATCTAGTCGAGGGCTGTCCGAACA
TGTGTTGCTTGGTGCTGGCACCCTCTTCGTTACAGAGCAATGGAGCTCTA
AAGTTCGGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTATCAGGGA
CCGCCTTCCGCCTTCACGAAGACGAAGAAATTTTATCTAGAAGTAGAGAA
GGGATTCCGAACCCTATACGTAACCGTAACCCTACCCCCAAACCCCGACC
CCCTTTCCCGATCCCCTTTCTCGACTGGTGTATTTTATGTTTTATCCCAT
ATGTTAGATCAAGACAAAACCTAACCCTGCGAAGGCTACGGAATATCAGA
AACATGGCACGTCACCCAAACTGCAGCAAATCGCAAGCATGCAGACCAGC
GGTATTCGTTTCCGCCTTCCACGTGAACAACCTGACCTCGCCGATCCCCT
CGCTCCCCCGACCACCAACCCCATCGTGCCCCCCACCTCGCCTCCCCCCG
CAACAACAAAAAAGTCGCAAGTTGTCGACAGATACGGCGAGATGCCAGCG
GACGCGGAAGCCTTCTCCTTGTGGATAACCTCCATCCTGCCCATGCAGCT
GCGCGAGAAACACACGCTGCTCTCCAGCAACTCGACCACCGCGCGCCTGC
TCGCCTGCGAACGCCATCTCATCTCCCTGAACGGGGGCGCGCCACCGGCT
CTGGCCGGTACGTTTCTATTTTCCGTACATATTTCTGCACGTTTTGTTTT
TTCTGGCCTTTGTCATCTGTGCTCATCTACCCCGCGCCTCTTTTTTTTTT
TCTTCTTTTTTTCTTTTTTTTTTTTTTCTTCCATTCGAGTATTATTGCGT
TGCGCTGATTCCAAGCCCGCTTCAGAACATGGGCATGGTGTTGCTATATA
TGTAACGGGGAACCGATGTTGTGTTCTCTGATCAGAAACTCCCCGGCCCT
CTATGAATCCCCCCCGTGCCCGCCCCCAAAACACCTCAAAGCTTCCCTTT
TTCTTTAGTTCTTTCCGCAACGCACCGCAACGCACCGCAACCAAGGACCA
AATAAAAGTCCTTGGCCCGAAACTCTCCGGCTCTTTTCCCTTCCTCCCGC
CTCCCGCCTGAAAACCTCAAAGTATTCGTTTTGTATGCGTGCATGTGCAC
AACCAATCCAAAACGCACCGAAACCAGAGTCGCGCCCGCAAAAATAATCG
TGTCACGCGCAAGCAGAGGGGTTGGTGGGTGGGTGGGTGTGGGGGCCCCA
CAGAGAGGAACCCTTCTGTGTGACACACGGACCAGAGAGAGCTCTGGCAT
GGCACGAAACGAATGTCCCTAGCAAGCGCTGGTTTGTTTTATGTAAGGGG
GAAAAACGCCCCAAGCATAAGCCTCTCCCCGATTTTTTTGTTTGTTTCTC
CTCGTTTTTTTTTTTTTTTTATGTGTTCGCGCAGGGAGGCGTGACGCCGC
GGCGGTGGCCGAGGATTTCGAGCGGCAGGTGGCGGCGGGCGAGTCGGAGG
AGTCTCTGGCAGCCCTAGTCGCGGGGGGGCCAGCTGGTGCAGCCGCCAGG
GGTGTCGACCCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1261:21725..27536- >mRNA_L-elsbetiae_contig1261.2107.1 ID=mRNA_L-elsbetiae_contig1261.2107.1|Name=mRNA_L-elsbetiae_contig1261.2107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1416bp|location=Sequence derived from alignment at L-elsbetiae_contig1261:21725..27536- (Laminarionema elsbetiae ELsaHSoW15) ATGTTTCCGGGAGAGACTTTGCAGCTGCACCTGTTCGAGCCCCGATACAA GCTCATGATGAAGCGGATCGTTAACACGTCTCGAAGATGTTTCCGGGAGA GACTTTGCAGCTGCACCTGTTCGAGCCCCGATACAAGCTCATGATGAAGC GGATCGTTAACACGTCTCGAAGATTCGCGTACGTCCCCAACTACTCGGGC TACGTGGCGTCCAACGGGGACGTGGCACTGATAGCGCAGCTGATTCGCGT ACGTCCCCAACTACTCGGGCTACGTGGCGTCCAACGGGGACGTGGCACTG ATAGCGCAGCTGTCCGAGTGCGAATTCCTCAGCGACGGAAGAGTGCTGCT CGTGGCCAAGCTCACCTCTAGACAGACGGTCACCGATCACTTCGTGGAGG GGGGGACCCAGGGGCTGCACTACTGCCGCCTCCAGGCCCGCAGCGACGAG CCCCCCCCGGCCGGGAGCGACCTCGCCGCGAAGCTGGAGGAGCTCCACGG GAGGACAAGAGGGCTGGCTCGTGGCGTCATCGAGCCCGTCATGTCCGAGT GCGAATTCCTCAGCGACGGAAGAGTGCTGCTCGTGGCCAAGCTCACCTCT AGACAGACGGTCACCGATCACTTCGTGGAGGGGGGGACCCAGGGGCTGCA CTACTGCCGCCTCCAGGCCCGCAGCGACGAGCCCCCCCCGGCCGGGAGCG ACCTCGCCGCGAAGCTGGAGGAGCTCCACGGGAGGACAAGAGGGCTGGCT CGTGGCGTCATCGAGCCCGTCATGTCGCAAGTTGTCGACAGATACGGCGA GATGCCAGCGGACGCGGAAGCCTTCTCCTTGTGGATAACCTCCATCCTGC CCATGCAGCTGCGCGAGAAACACACGCTGCTCTCCAGCAACTCGACCACC GCGCGCCTGCTCGCCTGCGAACGCCATCTCATCTCCCTGAACGGGGGCGC GCCACCGGCTCTGGCCGTCGCAAGTTGTCGACAGATACGGCGAGATGCCA GCGGACGCGGAAGCCTTCTCCTTGTGGATAACCTCCATCCTGCCCATGCA GCTGCGCGAGAAACACACGCTGCTCTCCAGCAACTCGACCACCGCGCGCC TGCTCGCCTGCGAACGCCATCTCATCTCCCTGAACGGGGGCGCGCCACCG GCTCTGGCCGGGAGGCGTGACGCCGCGGCGGTGGCCGAGGATTTCGAGCG GCAGGTGGCGGCGGGCGAGTCGGAGGAGTCTCTGGCAGCCCTAGTCGCGG GGGGGCCAGCTGGTGCAGCCGCCAGGGGTGTCGACCCCGGAGGCGTGACG CCGCGGCGGTGGCCGAGGATTTCGAGCGGCAGGTGGCGGCGGGCGAGTCG GAGGAGTCTCTGGCAGCCCTAGTCGCGGGGGGGCCAGCTGGTGCAGCCGC CAGGGGTGTCGACCCC back to top
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