mRNA_L-elsbetiae_contig1256.2070.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1256.2070.1
Unique NamemRNA_L-elsbetiae_contig1256.2070.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1256.2070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1256contigL-elsbetiae_contig1256:17651..23076 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size185
Cds size183
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1256.2070.1prot_L-elsbetiae_contig1256.2070.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1256 17651..23075 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815448.1835546-CDS-L-elsbetiae_contig1256:17650..177331622815448.1835546-CDS-L-elsbetiae_contig1256:17650..17733Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1256 17651..17733 +
1691682903.0589643-CDS-L-elsbetiae_contig1256:17650..177331691682903.0589643-CDS-L-elsbetiae_contig1256:17650..17733Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1256 17651..17733 +
1622815448.1950898-CDS-L-elsbetiae_contig1256:22575..225951622815448.1950898-CDS-L-elsbetiae_contig1256:22575..22595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1256 22576..22595 +
1691682903.067711-CDS-L-elsbetiae_contig1256:22575..225951691682903.067711-CDS-L-elsbetiae_contig1256:22575..22595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1256 22576..22595 +
1622815448.2064488-CDS-L-elsbetiae_contig1256:22995..230751622815448.2064488-CDS-L-elsbetiae_contig1256:22995..23075Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1256 22996..23075 +
1691682903.0764086-CDS-L-elsbetiae_contig1256:22995..230751691682903.0764086-CDS-L-elsbetiae_contig1256:22995..23075Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1256 22996..23075 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1256.2070.1

>prot_L-elsbetiae_contig1256.2070.1 ID=prot_L-elsbetiae_contig1256.2070.1|Name=mRNA_L-elsbetiae_contig1256.2070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=61bp
ATWRTVDAEYIIDRGSYARLERRRMGISALAPPSGHPFFCFENNDDSSTM
PGYLTTNSFTK
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mRNA from alignment at L-elsbetiae_contig1256:17651..23076+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1256.2070.1 ID=mRNA_L-elsbetiae_contig1256.2070.1|Name=mRNA_L-elsbetiae_contig1256.2070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5426bp|location=Sequence derived from alignment at L-elsbetiae_contig1256:17651..23076+ (Laminarionema elsbetiae ELsaHSoW15)
GCTACGTGGAGAACTGTTGACGCAGAGTACATAATAGATCGGGGTTCGTA
CGCGCGTCTCGAAAGGCGGAGAATGGGAATAAGGTAAACTGAAATATGGG
AAAACCTGGTGTGTGTTTATCTAGATTATTAGACTAGACTTACTAGATAG
ATGAATCCCCGTGTTGTAACGTTGTCATCAGTCGCAAAAAGGTGATACCA
TAGACTCCCCAACCACCGAGTACCACCACAAAGCGTAGTGTGAGCCTATG
CTCGATTGGTATGTACAATCATCTTGCTGCCGCTGGTGCTGGCTTTACCA
GCACTTTACTTGCTCGCTGCAGAGTGCAGCAAAAAAAAACATTTTTAATC
CCTCTCTAATTTCAAGTAAACGGCAGACAACGACTCCTGTCTGTATTACT
AACATGATTATATTCACATCATACGATCTACGATATATGATCTACGATAC
ACACAAGAGCATCAATGCTACTGAACATTGGCAAGTGCAGGACATGTGCC
AACATTTCCACAACATAAAAAATAAATCAGCGATAACACCCATGTTTATG
GAAGCTTAATCTTTCACGAAAATCTTGATCTTTGAGCAAGATTTTTATTT
CGTCTGTTTATGGGAGAAAATCTTAAAAAAAATCTTCCCCAAGATTTTTA
TTTTTATTTTTGTCTCTAACTCCAGTCGTATACCTTTTGTGAGGGTACAC
ACAGTGGCGTTGTAATCGAGTGGTTTGTTTCTATCCTGGGCATTTGAGAT
TTGATTTCCGGCAAAATGTTTGGCTTTCGAGCAAATGTTTGGCAAATATT
TGACCATCTGGCAGCTCGACAAAATCTTGCCCGGAGGCGGCGAGATCAAT
TCTCCTGCAGACTCCCGTCACCAACACCGACCGCTGCGCCCTCAATAGTG
AACGTGACGACTTTGTAAACTGCTTCGGATAACCCTAGGGCCTTTGCGTC
AACGTACCAGCCGCTTGTATATGGCTGGAGCCCGTCAGTCGTGTGGGAAA
AAAACGTTTGTGCAGGGTGTCTGGAGAAAGCATTGTTTGCGCCTTGATAA
CCATGTTTATGGAAGCATAATCTTTCACAAAAATCTTGATCTATTGGTAT
AGATTTTCCTGTCAATATTCGGCTAAAGAAGATTTTGTTCCAGCCACTGT
GGGGGAAAAATCTTGATTTGCTCGAACTTTTCGACCGCGGTGGAAATTGT
TCTCGCCGGTTGTCACACGATTTATGTTGACTTACCACCAATCCGCCACG
AAACTAGAACTTAGCGAGCTCGAAAAAGGGCCCTGGCCAAACGAAAAGCT
TCCGTGTTGATATGTTAGCCGTTGAATTGTACCGAAGGCTCCTCTTAGGC
ATACAAAAAGGTTTTCTAGGCGTCCACAAGTAGCGGCGGCGCATTTCACG
CCGCAACTTGCTTGCCGCAACGGCCAAAACAATCGCCGACGGAGAAAGCT
CACTTCAACGCAGACCAGCTCTCGCCCGCTAGACCATTTATCCATATCAA
AGCTTCTTGGCTGTCACCTCCACAAACATATCTCATCCGGATGGGCGTGG
GTTGGCAGTGGGTGCCTTCAGTCGGCAGCAAATCGCATCGCTGTGGACAT
GAGTGTGCAAAACGTGAAAAATCCGGCCTCTGTTTTTTACTTGAGTACAG
AGTACTTGTTCACCCGCTAATAAAAGAACACGCAGAACACTCGTGTCCAC
GGCGATGCGATTTGCTGCCGGCTGAAGGCGCCCACTGCCGACCCACGTCC
ATTCGGATGAGAAACGTTTAGGAGGTGACAGCCAAGAAGGTATCACATGG
ATATATGGTCTATTTAGCGGGCGAGAGCTGGACTGCGACGTCGTGTGGTC
TCCTTGCAGTAGGCGAATGTTTTGCTATTTCAGGCCCATGTTTTTTATGG
GAAAAAAATCTTAAATACTAGATAGCGAATAATGAGCTGCACACACCCAA
CCCAACCCAACCCTACCAAACCAACCCGTGGACCCGCGGCCCCAACCCAA
CCCAACCCAACCCAACCCAACCCAACCTACCCGCGGATCCACGGCCCTAA
CCCCACTCAACCCAACTCAACCCAACCCAACCAAAACCCACCCGCGGACC
CATGGCCCCAACCCAACCCAACCCAGTCCAACCGAACCCACCCGCGGACC
CATGGCCCCAACCCCGCCCGACTCAACTCAACCCAACCCAACCCGCGGAC
CCACGCACCCACCACAAAACAACTGGCACACCGTTCGTGACTCGAGGCCA
TTTCCACGTGGCCACTTTGCCCCGGCAGGGGTGCGAAATGCCACAGGATT
CATATTACTTAAGCCTCTTGGAGAGCACAGTGACCACGTTTGAAATCTAT
GATGACCACAATACGCTGTGGTAGTGCAGTTCCTGGTAGAGCCGACAGCA
GCAGAGTGTTGACGTAGGAGGGGTTTTGAAGGACGCTTCCATAAAAGATA
GACATATATTCGCCCTGATGTTAAATATAATCTAGTGTAGAGGCCGAAGC
GGGTGGCGGAGAAGGTTTTCGCTCGGGTTCTACACCCGGTAAGATCCTTT
TTTTTTCGAAAAAAGACCGTTCTATTTTGTGTAAATATTTTCAGTTTGAT
TCGAAACATCAACCCTGAGGTACTCCCTCCCTCTACACAGGGCACGAACC
CTATGCAGGGTCCGTATTTCCTGTGCCCTGGCAGGGGTGCGAAAAGCTAC
AGGGTTCATGGATATGATCCCAACCCTCTGACTGAGCAAAGTGGCCACGT
GTGTTTCCTCGCAGGCACACACGCGGTGCGTGCGTGTTTCGGAATTTGTA
TCCTTCTGTGCTGTCAGTACCATATCACCCCTGCGTGAGCAGTGAACCCA
TGCTACCCCCCCCCCCCGCCAGTGTTTCCTTGCTGCCTCTTCCTCCTAGC
GTTGGTGCTGTGTGTGTTACCTCTCTCGGTTGTCAATACATACCCTGCCT
CAGTCTCGGCGCAGGACTGTCAAACATGATCTCTGGTTGGCATGCCATTA
TCGAGTGAACTACCGGGGATGGCTCTTACGTAGCCCGGGTCTCCGTAATA
TATTTGGACAAACGACAGTGAAGCACGGCCATCTTTTGTCGGAGCACAGC
TAAACAGGCGTGACGAACATTCCCTAATTTATCTCCCCCCTCAGAAGGCA
ACATATCGTCAATCGGTGCTCTATAGACTTTGTTGTGGCCGAAAAGGAGT
TTTTTGACGGTCGTATTCAAGTTTGGAGGGGCGCCGGACGCGATCGCGGA
GGAACTTTGGACGATATTTAGAGCCTTCTTTTTTCCTCCTGGGGGGATGA
AGGGAACAAAATGTCGCGGCTTCGCTCCGCGGCTCAATAAAAATCTTGGT
GTATTTTGACCTTTGTGGCCACGTTTCCTCGCCAAGAGCTCGGAATCAGA
TTTTCGCCTCTCAACAGCATTCGAAGCCCTCTATAGATCAGCTGTCTAAT
CTGGCACACTCCGGGTTTGATTGTTGGCCTCGGAGCAAGATTTTGCTGGA
TCTGGCCAAGATCTGGCCAAAACGTCGTGTTTGCGCAAATATTCAGCCAA
AATGTTCAAAATTTGTAAATCTTGGCCAAATCTAGCAAAATCTTGCTCCG
AGGCCAACAACCAAAGCCGGAGTGTGCTAGATTGGACAGCTGATCCATCC
GTAAATCTCTGGAGGAGAGCTTTGAAAGCCCCTGAGAAGTGAAAATCTGA
TTTCGAGCTCGTGGCGAAGAAACGTGGCCACAAAGAAAGATAAATGACCA
AGATTTTTATTGTCAACATTTGTTTCCCATAAATATGGGCGTGAATCGTA
AAAGGTGTTCGAGGATAGATGCCTGCGAGTAGACCGGTGCACAGCTCTCA
TACATAAATATGATGTGTCCAAACGAGCACAATTTTTCGAAAGAAAAACA
GCTATGTATGTAATCAAAAATGGAACCTAACCCTCATTGGAGACGAGACT
CCCGTGAGATTCAAACGGTATTCCATATAGTGACGTAATATTGGTTCAGC
CCAGTAGAAAAACACCTAAAATGCTGAAAAGGTACATCACTTCCCCTGCA
CAACTCTGCCAGGTCAAACAGCGTGTATTTCGGGGAGAAACCCGCCGTAA
CGCTGTGGTGGTGTCATCTTTCAAAATGGTATGTAGGAACACTTTGCTCT
CTATCTGTCTTAATGCAGAATAGAAAGCTAGATGAGTCTAGGGGGGACAT
GTGCCACTATTCTCTCACATTGACATTTTGACCGAGACATCAGATTTTGC
GGCGGGTCTTTTTGGCGGCGGCGGGTTTATATTGTAACATATTTGACGGT
TTAATACAGCGGTGGATCTCACATCTCACAGGCGCGCGCGGTTCGGCCCC
CCTCACAATCACTCATGGCTTCTCTCTTTAAACTTGTGAATAGCTCCCAA
GCATCACCAGTGTAAAGTCGCTATCCAAGTTGAGAATCAGACTACTAGAA
ATATAATAGACCTCTGGCCAACAACAGTTACCCACAAACAGCCGCGCTGG
GTGCTGGGTGCTATATACGCCTACCACCATTTTTGGTACGCAACTTCGTT
CTTGAAAATGTGTCTTCGTGCAAACTCACGACCTCCGCGCTATACGATAT
AATACCAGTACTATATGACAGACAGCGTTATGTATGTTCTATGTGAGTCT
AGCTTGGTAATCTTTTGGGAAACGGGTCTCATAAAAAAAACTTGGTGAAA
ACTAAGCTGTCAGAAATGTGAGGCGCCCGGTCGGCTGTTGGTGGATTTGA
CAGATTTATGGCGTGATCGCACTCCAAGTCAACCACTAAAAATCTGCCAT
CCATCCGCTGCGAAAATGATTGGATATGATAAGAGTATCCGTCTAACATA
TTATATTCTCTTGCCGCTGTGTGCGCGCGCTGCGTCTCACCTGCTGCTTG
TGCTGCCACCATTTCTGTCGACCAGCGCTCTTGCCCCCCCCTCAGGTGGG
CTACGATTGCCTTTCTTAGCTGCGGCGTCTGTTTCTAGTATCATGATGAT
TATGCCCCTGGTACATACTTCAAGTAGGCTGCGTCCTGAGTAGCCCTGAC
ACAATCGTGGGTCTATCTCATATGTATATATGCTCTTTAAAAATCGGCAC
GGCCGGTGGTTTGAAAATATTTGTCATTTTTCACTATCTCCTCGCGATCT
CGTATTGTGCATGGCGAGGAGCCGGGCTTTGAACTGCCTCGCTCTATCAT
CAAGAGAGAGACCAAACGAGACGCGGTTTGTGACCGAAAAACATCCTTTA
AAATAATTTGTCGAACCAACAAATTCAATGTATGCTTCATCATGTGCATT
TTGACTTTCAATTTTCCTTGTCTTCGCTGTTTATGATAATACCAGGACAC
CCTTTTTTCTGCTTCGAAAACAACGACGACAGCAGCACCATGCCTGGATA
CTTGACAACGAACTCCTTCACCAAAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1256:17651..23076+

>mRNA_L-elsbetiae_contig1256.2070.1 ID=mRNA_L-elsbetiae_contig1256.2070.1|Name=mRNA_L-elsbetiae_contig1256.2070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=366bp|location=Sequence derived from alignment at L-elsbetiae_contig1256:17651..23076+ (Laminarionema elsbetiae ELsaHSoW15)
GCTACGTGGAGAACTGTTGACGCAGAGTACATAATAGATCGGGGTTCGTA
CGCGCGTCTCGAAAGGCGGAGAATGGGAATAAGGCTACGTGGAGAACTGT
TGACGCAGAGTACATAATAGATCGGGGTTCGTACGCGCGTCTCGAAAGGC
GGAGAATGGGAATAAGCGCTCTTGCCCCCCCCTCAGCGCTCTTGCCCCCC
CCTCAGGACACCCTTTTTTCTGCTTCGAAAACAACGACGACAGCAGCACC
ATGCCTGGATACTTGACAACGAACTCCTTCACCAAAGACACCCTTTTTTC
TGCTTCGAAAACAACGACGACAGCAGCACCATGCCTGGATACTTGACAAC
GAACTCCTTCACCAAA
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