mRNA_L-elsbetiae_contig12552.2065.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: A0A6H5KQH0_9PHAE (Pep3_Vps18 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH0_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 1.060e-127 Identity = 257/367 (70.03%), Postives = 273/367 (74.39%), Query Frame = 1 Query: 1 ALKLMECGGGWKAEALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDREREEAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGALDHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPSRAAGEGGDLAIKYLEFCVNELKLKDAAIHNHLLALYAQEEEWRERRATATAGTSSSSAPGFRQRKDHAGTAAVPGSA---------EXXXXXXXXXXXXXXXXXXXXXXXXXAPSGSALLAFIARPAEDRFFDPMYALRLC 1074 ALK MEC GWKA ALKTYLLERL HLS + GE+KMQRTMLCTWLTE++L+GFTYLPLD GT REREEAE LAEEL++FLR +ALDPATTM+LLS H RGEEALFYATLVEDYDRVLAHH S DH AALEVLR APFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRR AEG+ S A GEG DLAIKYLEFCVN+L LKDAAIHNHLLALYAQEE+WRE SS P R K +G +V GS XXXXXXXXXXXXXXXXXXXXXXXXX S+LLAFIARP E+RFFDPMYALRLC Sbjct: 719 ALKFMECEDGWKATALKTYLLERLGHLSQKQ---GEYKMQRTMLCTWLTEIFLRGFTYLPLDSGTAREREEAENCLAEELKSFLRDYSSALDPATTMNLLSKHGRGEEALFYATLVEDYDRVLAHHTSH--GPDHNAALEVLRKAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRKAAMVRLSASPPAAVSVSPT-----AEGNASLAVGEGEDLAIKYLEFCVNDLNLKDAAIHNHLLALYAQEEQWREGHRHP------SSPPSTRGYKALSGEGSVSGSGLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSSLLAFIARPPEERFFDPMYALRLC 1069
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: D8LI29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI29_ECTSI) HSP 1 Score: 389 bits (999), Expect = 5.170e-125 Identity = 256/375 (68.27%), Postives = 275/375 (73.33%), Query Frame = 1 Query: 1 ALKLMECGGGWKAEALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDREREEAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGALDHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPS-RAAGEGGDLAIKYLEFCVNELKLKDAAIHNHLLALYAQEEEWRERRATATAGTSSSSAPGFRQRK--DHA-----GTAAVPGSA---------EXXXXXXXXXXXXXXXXXXXXXXXXXAPSGSALLAFIARPAEDRFFDPMYALRLC 1074 ALK MEC GWKA ALKTYLLERL HLS + GE+KMQRTMLCTWLTE++L+GFTYLPLD GT REREEAE SLAEEL++FLR +ALDPATTM+LLS H RGEEALFYATLVEDYDRVLAHH S DHKAALEVLR APFDKVEPLVYKYSASLMAADPAGTI TWMSKPQLKPTKLIPALVRYSQRR AEG+ S AAGEG DLAIKYLEFCVN+L LKDAAIHNHLLALYAQEEEWRE + SS S G++ D A G +V GS XXXXXXXXXXXXXXXXXXXXXXXX A SALLAFIARP E+RFFDP++ +C Sbjct: 329 ALKFMECEDGWKATALKTYLLERLGHLSQKQ---GEYKMQRTMLCTWLTEIFLRGFTYLPLDSGTAREREEAENSLAEELKSFLREYSSALDPATTMNLLSKHGRGEEALFYATLVEDYDRVLAHHTSH--GPDHKAALEVLRKAPFDKVEPLVYKYSASLMAADPAGTIGTWMSKPQLKPTKLIPALVRYSQRRKAAMERLSASPPAAVSVSPTAA---AEGNASLAAAGEGEDLAIKYLEFCVNDLNLKDAAIHNHLLALYAQEEEWRE----SHRHPSSLSTRGYKALSGVDDAYQALSGAGSVSGSGLTKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASGSSALLAFIARPPEERFFDPIFKREIC 691
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: A0A836CAW5_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW5_9STRA) HSP 1 Score: 195 bits (495), Expect = 9.120e-52 Identity = 167/364 (45.88%), Postives = 198/364 (54.40%), Query Frame = 1 Query: 1 ALKLMECGGGWKAEALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDREREEAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGAL--DHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPSRAAGEGGDLAIKYLEFCVNELKLKDAAIHNHLLALYAQEEEWRERRATATAGTSSSSAPGFRQRKDHAGTAAVPGSAEXXXXXXXXXXXXXXXXXXXXXXXXXAPSGSA----LLAFIARPAEDRFFDPMYALRLC 1074 AL +E G AL+ YLL +L LS +G HK QRTMLCTWL ELYL P A +L+ E R FL + +AL+ T +LL+ H R ++ LF+A L DY+RVLA H + RGA D+ A+L LR AP +KVE LVY+YSA LM AD AGT+ WM KP L+ TKL+PALVRYS+ R A +P RA G D A+ YLE+CVN L+L+D AIHNHLL LYAQ E AA XXXXXXXXXXXXXXXXXXXXXXXXX G A LL +ARP E RFFD YALR+C Sbjct: 576 ALNFVEAAGEGGGAALREYLLRKLETLSPTGKWSG-HKAQRTMLCTWLAELYLCALNDTP-------PTAPASAALSREFRTFLEQHSSALNAVATSALLAAHGRRDDVLFFAELTGDYERVLACHLAPRGASGPDYPASLAALRRAPLEKVEGLVYRYSAVLMDADAAGTVSMWMGKPGLRATKLMPALVRYSRHRA------------------------AAAEP-RA---GPDWAVTYLEYCVNTLQLQDPAIHNHLLTLYAQAE------------------------------AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGGKATSTPLLDLLARPPEKRFFDLTYALRVC 873
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: A0A196SHF3_BLAHN (Vacuolar protein sorting-associated protein 18 n=2 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SHF3_BLAHN) HSP 1 Score: 161 bits (408), Expect = 3.020e-40 Identity = 106/266 (39.85%), Postives = 144/266 (54.14%), Query Frame = 1 Query: 1 ALKLMECGGGWKAEALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDREREEAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGALDHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPSRAAGEGGDLAIKYLEFCVNELKLKDAAIHNHLLALYAQEE 798 AL+ M+ G ALK YLL++L + K K QRT+LCTWLTE+YL + + T+ E EE + +L E R FL A LD TT SLLS+H EE LF+A L+EDYDRVL+HH D ++A+ +L+ P +K EPL YK++ ++ P T++ W++ L P KLIPALVRY Q R +G+ E AI+YLE+ V +L+ D AIHN+LL+LYA EE Sbjct: 466 ALQFMDKGA---RPALKAYLLKKLDEVPPKK------KAQRTLLCTWLTEIYLDEINGMSI--ATEEEEEEKQSTLLE-FRNFLTERCACLDVPTTYSLLSSHGCVEELLFFARLIEDYDRVLSHHIQRE---DIESAIFILKEVPIEKAEPLYYKFAPQMLLMAPTETVDAWIAARFLSPCKLIPALVRYDQHRHHAME---------------------KGETDLGENE----AIRYLEYQVKDLQNTDPAIHNYLLSLYAVEE 691
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: UPI00071141C8 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI00071141C8) HSP 1 Score: 144 bits (362), Expect = 3.650e-34 Identity = 94/253 (37.15%), Postives = 134/253 (52.96%), Query Frame = 1 Query: 43 ALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDREREEAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGALDHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPSRAAGEGGDLAIKYLEFCVNELKLKDAAIHNHLLALYAQEEE 801 ALK YLL +L LS+ + K QRT+L TWLTE+YL + + T E EEA+ ++ E R FL LD ATT SLLS+H EE LF+A +EDYDRVL HH D +A+ +L+ P ++ E L YKY+ ++ + P T++ W++ L P KLIPALVRY ++ + E + A++YLE+ V + + D AIHN+LL+LYA E++ Sbjct: 487 ALKKYLLLKLGSLSI------KQKAQRTLLGTWLTEIYLDEINGMGI---TTEEEEEAKQAMILEFRKFLTEYSGDLDVATTYSLLSSHGCIEELLFFARRIEDYDRVLTHHIQRE---DIASAIFILQEVPVERAEALYYKYAPQMLLSSPHETVDAWIAARFLSPCKLIPALVRYDRQYR------------------------------QKQSEEENEAVRYLEYQVKDNQNTDPAIHNYLLSLYAMEKD 697
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: A0A5D6XVF9_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVF9_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.790e-32 Identity = 89/256 (34.77%), Postives = 139/256 (54.30%), Query Frame = 1 Query: 40 EALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDREREEAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGALDHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPSRAAGEGGDLAIKYLEFCVNELKLKDAAIHNHLLALYAQEEEWR 807 ++L +LL++L+ L D T Q+T+LC+W+ EL+L F L G+ ++ +A +L E + FL+ LDPATT +L+++H R +E +FYATL+EDY++V+ +H RG ++ AA+E+LR P KVE L YKYS L+ P E W L PT+LIP++VR+ ++ A SRA E LAI++L+F + + +D IHN++L L A+ + R Sbjct: 515 DSLLLFLLQKLKSLGSDDKT------QKTVLCSWIVELFLDKFNVLK---GSAQD-VDAHANLLFEFKQFLQDQKHHLDPATTFNLIASHGRTDEFVFYATLIEDYEKVVTYHVH-RG--EYGAAIELLRSVPTSKVEELYYKYSPELIVHKPKEVYEAWKEAETLNPTRLIPSIVRHVHQKDAL----------------------ANSQKSRAVLE---LAIRFLKFAIKQGDCRDPTIHNYILFLLAKHPDER 732
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: K3WGY8_GLOUD (Pep3_Vps18 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGY8_GLOUD) HSP 1 Score: 136 bits (343), Expect = 1.180e-31 Identity = 86/256 (33.59%), Postives = 141/256 (55.08%), Query Frame = 1 Query: 40 EALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDREREEAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGALDHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPSRAAGEGGDLAIKYLEFCVNELKLKDAAIHNHLLALYAQEEEWR 807 ++L +LL++L+ L D+ T Q+T+LC+W+ EL+L F + G+ ++ +A +L E + FL+ + LDPATT +L+++H R +E +FYATL+EDY++V+ +H RG ++ AA+E+LR P KVE L YKYS L+ P E W L PT+LIP++VR+ ++ + SR+ E LAI++L+F + + +D IHN++L L A+ + R Sbjct: 505 DSLLLFLLQKLKSLGNDEKT------QKTVLCSWIVELFLDKFNVMK---GSAQD-VDAHANLLFEFKQFLQDQKSHLDPATTFNLIASHGRTDELVFYATLIEDYEKVVTYHVH-RG--EYGAAIELLRSVPTSKVEELYYKYSPELIIHKPKEVYEAWKEAETLNPTRLIPSIVRHVHQKDTA----------------------SNSQKSRSVLE---LAIRFLKFAIKQGNCRDPTIHNYILFLLAKHPDER 722
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: H3GBZ0_PHYRM (Pep3_Vps18 domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GBZ0_PHYRM) HSP 1 Score: 136 bits (343), Expect = 1.190e-31 Identity = 88/259 (33.98%), Postives = 141/259 (54.44%), Query Frame = 1 Query: 40 EALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDREREEAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGALDHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPSRAAGEGG---DLAIKYLEFCVNELKLKDAAIHNHLLALYAQEEEWR 807 ++L +LL++L+ L E K Q+T+LC+WL EL+L F L G+ ++ +A +L E + FL+ + LDPATT +L+S+H R +E +FYATL+EDY++V+ +H RG ++ AA+E+LR K+E L YKYS L+ P E W+ L PT+LIP++VR+ ++ GDP+ + D+AI++L+F + + +D IHN+LL L A+ + R Sbjct: 516 DSLLLFLLQKLKSLG------SEEKTQKTVLCSWLVELFLDKFNVLK---GSAQD-VDAHANLLFEFKQFLQDQKSHLDPATTFNLISSHGRPDELVFYATLIEDYEKVITYHVD-RG--EYGAAIELLRSVETSKIEELWYKYSPELIIHKPKEVYEAWLEAATLNPTRLIPSIVRHVHQKNG-----------------------VAGDPTSNTTKSRSVLDMAIRFLKFAIKQGN-RDPTIHNYLLFLLAKHPDER 737
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: A0A3M6V9P5_9STRA (Pep3_Vps18 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9P5_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.190e-31 Identity = 87/259 (33.59%), Postives = 142/259 (54.83%), Query Frame = 1 Query: 40 EALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDREREEAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGALDHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPSRAAGEGG---DLAIKYLEFCVNELKLKDAAIHNHLLALYAQEEEWR 807 ++L +LL++L+ L E K Q+T+LC+W+ EL+L F L G+ ++ +A +L E + FL+ + LDPATT +L+S+H R +E +FYATL+EDY++V+ +H RG ++ AA+E+LR KVE L YKYS L+ P E W+ L PT+LIP++VR+ ++ +GD + + + D+AI++L+F + + +D IHN+LL L A+ + R Sbjct: 525 DSLLLFLLQKLKSLG------SEEKTQKTVLCSWIVELFLDKFNVLK---GSAQD-VDAHANLLFEFKQFLQDQKSHLDPATTFNLISSHGRPDELMFYATLIEDYEKVITYHVD-RG--EYGAAIELLRSVETSKVEELWYKYSPELIIHKPKEVYEAWLEATSLNPTRLIPSIVRHVHQKNG-----------------------VDGDSANSTTKSRSVLDMAIRFLKFAIKQGN-RDPTIHNYLLFLLAKHPDER 746
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Match: A0A6G0XL45_9STRA (Pep3_Vps18 domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XL45_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.600e-31 Identity = 92/270 (34.07%), Postives = 143/270 (52.96%), Query Frame = 1 Query: 1 ALKLMECGGGWKAEALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKGFTYLPLDPGTDRERE-EAEFSLAEELRAFLRGNVAALDPATTMSLLSNHARGEEALFYATLVEDYDRVLAHHASSRGALDHKAALEVLRMAPFDKVEPLVYKYSASLMAADPAGTIETWMSKPQLKPTKLIPALVRYSQRRXXXXXXXXXXXXXXXXXXXXXXXXXAEGDPSRAAGEGGDLAIKYLEFCVNELKLKDAAIHNHLLALYAQEEEWR 807 AL+ ME AL T+LL++L T+ E K Q T+LCTW+ ELYL F + TD +R + +L E + FL+ LDPATT +L+++H R +E +F+A+L+EDY++V+ +H RG ++ AA+E+LR AP KVE L YKYS L+ A P E W + L PT+LIP++VR+ ++ +G+ +LAI +L+F + + +D IHN+++ L A+ + R Sbjct: 498 ALRFMEAKA---TNALHTFLLKKLA------LTSVEDKTQATVLCTWIVELYLDKFNDITAMSETDVDRTIDMHANLLFEFKQFLQDQKRHLDPATTFNLIASHGRTDELVFFASLIEDYEKVVTYHIH-RG--EYGAAIEILRGAPTQKVEELYYKYSPELIIAKPKEVFEAWKAAESLDPTRLIPSIVRHVHQK--------------------------DGNARSIL----ELAINFLKFTIEQGN-RDETIHNYIIFLLAKHPDER 724 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12552.2065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12552.2065.1 >prot_L-elsbetiae_contig12552.2065.1 ID=prot_L-elsbetiae_contig12552.2065.1|Name=mRNA_L-elsbetiae_contig12552.2065.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=354bp MECGGGWKAEALKTYLLERLRHLSLDKATAGEHKMQRTMLCTWLTELYLKback to top mRNA from alignment at L-elsbetiae_contig12552:1039..5152+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12552.2065.1 ID=mRNA_L-elsbetiae_contig12552.2065.1|Name=mRNA_L-elsbetiae_contig12552.2065.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4114bp|location=Sequence derived from alignment at L-elsbetiae_contig12552:1039..5152+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12552:1039..5152+ >mRNA_L-elsbetiae_contig12552.2065.1 ID=mRNA_L-elsbetiae_contig12552.2065.1|Name=mRNA_L-elsbetiae_contig12552.2065.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2124bp|location=Sequence derived from alignment at L-elsbetiae_contig12552:1039..5152+ (Laminarionema elsbetiae ELsaHSoW15)back to top |