mRNA_L-elsbetiae_contig12549.2061.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12549.2061.1
Unique NamemRNA_L-elsbetiae_contig12549.2061.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: E6ZES8_ECTSI (Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES8_ECTSI)

HSP 1 Score: 768 bits (1982), Expect = 3.110e-280
Identity = 370/381 (97.11%), Postives = 378/381 (99.21%), Query Frame = 1
Query:   19 MARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGKLEKILAFRA 1161
            M+RLNLNSI+SWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGA+IYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPF+IAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFF LLSVLS+VIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLF+ADFCLLAWSGTTPVDDYFK++GAVVSIGYFAFFVFGGLFVG LEK LAFRA
Sbjct:    1 MSRLNLNSILSWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGALIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFVLLSVLSVVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFCLLAWSGTTPVDDYFKVIGAVVSIGYFAFFVFGGLFVGWLEKTLAFRA 381          
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: D0IPB5_SACJA (Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepID=D0IPB5_SACJA)

HSP 1 Score: 754 bits (1946), Expect = 1.200e-274
Identity = 361/380 (95.00%), Postives = 374/380 (98.42%), Query Frame = 1
Query:   19 MARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGKLEKILAFR 1158
            M+R N+N+I+SWVDSHIIDYPTAMNLNYNWSFGS+AGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSG VIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPF+IAGLVFVHLGLLHKDGSNNPLGIKTKTAN+NFYPY+YVKDLVAFF L+S+LSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIF+YPLLNTSILRS NFRPIYAVVFWLF+ADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVG LEK+LA R
Sbjct:    1 MSRFNVNAILSWVDSHIIDYPTAMNLNYNWSFGSTAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGGVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFVLMSMLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFIYPLLNTSILRSGNFRPIYAVVFWLFVADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGWLEKMLAVR 380          
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: A0A0A7LKY8_SACLA (Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepID=A0A0A7LKY8_SACLA)

HSP 1 Score: 741 bits (1912), Expect = 1.820e-269
Identity = 357/380 (93.95%), Postives = 370/380 (97.37%), Query Frame = 1
Query:   19 MARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGKLEKILAFR 1158
            M+R N+N+I+SWVDSHIIDYPTAMNLNYNWSFGS+AGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSG VIYVLMMATAFIGYVL  GQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFT  NPTLNRFFSLHYLLPF+IAGLVFVHLGLLHKDGSNNPLGIKTKTAN+NFYPY+YVKDLVAFF L+S+LSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIF+YPLLNTSILRS NFRPIYAVVFWLF+ADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVG LEK+LA R
Sbjct:    1 MSRFNVNAILSWVDSHIIDYPTAMNLNYNWSFGSTAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGGVIYVLMMATAFIGYVLALGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTAVNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFVLMSMLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFIYPLLNTSILRSGNFRPIYAVVFWLFVADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGWLEKMLAVR 380          
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: A0A8F0FCD4_9PHAE (Cytochrome b n=1 Tax=Laminaria ephemera TaxID=309364 RepID=A0A8F0FCD4_9PHAE)

HSP 1 Score: 726 bits (1875), Expect = 7.940e-264
Identity = 348/380 (91.58%), Postives = 365/380 (96.05%), Query Frame = 1
Query:   19 MARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGKLEKILAFR 1158
            M+R N+N+I+SWVDSHIIDYPTAMNLNYNWSFGS+AGF LVIQILSGAFLAMHYAGETHYAFSSVEHIMRDV++GWLIRYMHANGASFFFIVVYAHIFRGLYYGSYM PR QLWWSG VIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPF+IAGLVFVHLGLLHKDGSNNPLGIKTKTAN+NFYPY+YVKDLVAFFALLS+LS+VIFY PNSLGDPDNYLEADPY TPAHIVPEWYFLPFYAILRVIPNKVGGI+TMGGAIAIIFLYPLLNTSILRS NFRPIYAVVFWLF+ADFCLLAWSGTTPVDD++K+ G  VS  YFAFFVFGGLFVG LEKILA R
Sbjct:    1 MSRFNVNAILSWVDSHIIDYPTAMNLNYNWSFGSTAGFGLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVENGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMAPRHQLWWSGGVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALLSMLSVVIFYLPNSLGDPDNYLEADPYSTPAHIVPEWYFLPFYAILRVIPNKVGGIITMGGAIAIIFLYPLLNTSILRSGNFRPIYAVVFWLFVADFCLLAWSGTTPVDDHYKLFGVTVSTCYFAFFVFGGLFVGWLEKILAVR 380          
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: A0A0U1WNN6_SARFS (Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A0U1WNN6_SARFS)

HSP 1 Score: 700 bits (1807), Expect = 5.390e-253
Identity = 325/377 (86.21%), Postives = 354/377 (93.90%), Query Frame = 1
Query:   19 MARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGKLEKIL 1149
            M R NLN+I+SWVDSHIIDYPTAMNLNYNWSFGS+AGFCL+IQILSGAFLAMHYA ETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFF++VYAHIFRGLYYGSYMEPRQ LWWSG +IYVLMMATAFIGYVLPWGQMSFWGATVITS FSI P IGKEVVMW+WGGFTVGNPTLNRF+SLHYLLPF+I G+VFVHLGLLHKDGSNNPLGIKT+ AN+NFYPY+YVKDLVAFF L+  LS+ IFYFPN+LG+PDNYLEADPY TPAHIVPEWYFLPFYAILRVIPNKVGGIL MGGAI ++FLYPLLNTS+LRS NFRP+YAVVFWLF+ADFCLL W+GTTPVDDYF+ +G  VS+GYF+FF+FGGLFVG LEKIL
Sbjct:    1 MTRWNLNAILSWVDSHIIDYPTAMNLNYNWSFGSTAGFCLLIQILSGAFLAMHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFMLVYAHIFRGLYYGSYMEPRQHLWWSGTLIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLHYLLPFLITGMVFVHLGLLHKDGSNNPLGIKTRVANINFYPYIYVKDLVAFFVLVFSLSVFIFYFPNALGEPDNYLEADPYSTPAHIVPEWYFLPFYAILRVIPNKVGGILAMGGAIVMLFLYPLLNTSMLRSGNFRPVYAVVFWLFVADFCLLGWAGTTPVDDYFRFIGITVSVGYFSFFIFGGLFVGWLEKIL 377          
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: A0A8E8PEC1_9PHAE (Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PEC1_9PHAE)

HSP 1 Score: 662 bits (1709), Expect = 7.610e-238
Identity = 307/380 (80.79%), Postives = 343/380 (90.26%), Query Frame = 1
Query:   19 MARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGKLEKILAFR 1158
            M+R NL+ IISW+DSHIIDYPTAMNLNYNWSFG++AGFCLVIQILSG+FLAMHY  +THYAFSS+EHIMRDVK GWLIRY+H+NGAS FFIVVYAHIFRGLY+GS+MEPRQQLWWSG VIY+LMMATAFIGYVLPWGQMSFWGATVITSLFSI P +G+EVVMW+WGGFTVGNPTLNRF+SLHY LPF+I+GLVF HLGLLHK+GSNNPLG +T+  N++FYPY+Y KDLV+ F LLS+LSI++FYFPN+LGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTM GAI +IFLYP+LN S LRS NFRPIY+V FWLFL DF LLAWSGTTPVDDYF I+G +VS+ YF FF  G L VG LEK   FR
Sbjct:    1 MSRFNLDGIISWIDSHIIDYPTAMNLNYNWSFGAAAGFCLVIQILSGSFLAMHYVSDTHYAFSSIEHIMRDVKGGWLIRYIHSNGASLFFIVVYAHIFRGLYFGSFMEPRQQLWWSGGVIYILMMATAFIGYVLPWGQMSFWGATVITSLFSILPSVGREVVMWIWGGFTVGNPTLNRFYSLHYFLPFLISGLVFFHLGLLHKEGSNNPLGFRTRIGNLSFYPYLYAKDLVSLFILLSLLSIIVFYFPNTLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMAGAIGVIFLYPVLNISKLRSGNFRPIYSVGFWLFLCDFFLLAWSGTTPVDDYFIIIGVIVSLSYFLFFFVGSLVVGFLEKEFLFR 380          
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: Q2TUA7_DICDH (Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID=Q2TUA7_DICDH)

HSP 1 Score: 644 bits (1661), Expect = 2.540e-231
Identity = 293/378 (77.51%), Postives = 338/378 (89.42%), Query Frame = 1
Query:   19 MARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGKLEKILA 1152
            M+R N+N++++WVDSHIIDYPTAMNLNYNWS+GS+AGFCL IQILSGAFLAMHY  ETHYAF+S+EHIMRDV +GWLIRY+HANGASFFFIVVYAHIFRGLYYGS+MEPRQ LWWSGA+IYVLMMATAFIGYVLPWGQMSFWG TVIT+LF++ P IGK++VMW+WGG+TVGNPTLNRFFSLHY+LPF+IAGLVFVHLGLLHKDGSNNPLG+KT+ ANVNFYPY YVKDLV FF LLSV+S+ IFY+PN LG PDNY+EADPYGTPAHIVPEWYFLPFYAILR+IPNKVGGIL MGGAI  +F+YPLLNTS++RS NFRP+YA+ FW+F+ +F LLAWSGTTPVDDY+   G   S       + GG+F+G +E  L+
Sbjct:    1 MSRWNVNTLVAWVDSHIIDYPTAMNLNYNWSYGSAAGFCLGIQILSGAFLAMHYVSETHYAFASIEHIMRDVDNGWLIRYLHANGASFFFIVVYAHIFRGLYYGSFMEPRQSLWWSGAIIYVLMMATAFIGYVLPWGQMSFWGVTVITNLFTVIPVIGKDIVMWIWGGYTVGNPTLNRFFSLHYVLPFLIAGLVFVHLGLLHKDGSNNPLGVKTRLANVNFYPYFYVKDLVGFFVLLSVMSVFIFYYPNMLGHPDNYIEADPYGTPAHIVPEWYFLPFYAILRIIPNKVGGILAMGGAILALFIYPLLNTSLIRSGNFRPLYALAFWVFVGNFVLLAWSGTTPVDDYYLPFGIFASSYXXXXXIAGGIFIGWIENYLS 378          
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: A0A7S6UA51_9STRA (Cytochrome b n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA51_9STRA)

HSP 1 Score: 567 bits (1461), Expect = 7.920e-201
Identity = 266/378 (70.37%), Postives = 308/378 (81.48%), Query Frame = 1
Query:   22 ARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGKLEKILAF 1155
            +R NL+ I++WVDSHIIDYPT MN+NYNWSFGS+AGFCL IQILSG FLAMHY  E H AFSS+EHIMRDV +GWL+RY+HANGASFFFIVVY HIFRGLYYGSY+EPRQ+LW SG +I++LMMATAF+GYVLPWGQMSFWGATVIT+LFS  P  G  +V WLWGGF+VGNPTLNRFFSLHYL+PFVIAGLVFVHL LLHKDGS NPLG  +  +++ FYPY YVKDL+ FF LL+ LS+ +F++PNSLG PDNY+ ADP  TPAHIVPEWYFLPFYAILR IP+K+GG+L MGGAI I+   P  NTS+LRS NFRPIY   FWL +ADF LL W G  PVDD +  +G   +  YF FFV G   +G LE+ L F
Sbjct:    4 SRWNLHPILAWVDSHIIDYPTPMNINYNWSFGSAAGFCLGIQILSGVFLAMHYTPEIHLAFSSLEHIMRDVNNGWLVRYIHANGASFFFIVVYCHIFRGLYYGSYIEPRQELWCSGVIIFLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVAGDAIVQWLWGGFSVGNPTLNRFFSLHYLMPFVIAGLVFVHLALLHKDGSGNPLGANSSFSSIPFYPYFYVKDLLGFFLLLTSLSVFVFFWPNSLGHPDNYIPADPLVTPAHIVPEWYFLPFYAILRSIPDKLGGVLGMGGAIVILLAIPFFNTSVLRSGNFRPIYLFGFWLIVADFLLLGWVGQKPVDDPYVSLGQYATFFYFLFFVLGIFAIGLLERWLLF 381          
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: A0A4Y5T8W2_9PHAE (Cytochrome b n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A4Y5T8W2_9PHAE)

HSP 1 Score: 521 bits (1341), Expect = 2.180e-182
Identity = 240/388 (61.86%), Postives = 305/388 (78.61%), Query Frame = 1
Query:   19 MARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGT---TPVD----------DYFKIVGAVVSIGYFAFFVFGGLFVGKLEK 1143
            M R N N I++W+DSHIIDYPTA+NLNYNWSFGS+AGFCL IQI++GA+L+M Y G+   AF ++E+IMRD+K GWLIRY+HANGASFFF+ +Y HIFRGLYYGSY EPRQ LWWSGA+I++  MATAF+GY+LPWGQMSFW ATVIT + +I P IGK +++WLWGG+ VGNPTL+RF+SLH++ PFV+ GLVF+HLGLLHKDGSNNPLGIKT+ +N+NFYPY YVKDL++FF +L VLSI +FY+PN L DP NY++ADP+ TP HIVPEWYFLP+Y++LR +P+K+GGI  MG AI +IF++P+ +TS +RS NFRPIYA  FW F+     LA SG     P D          +Y+   G V+S+ YF  F   G+  G+ E+
Sbjct:    1 MGRWNTNLILAWIDSHIIDYPTALNLNYNWSFGSAAGFCLGIQIITGAYLSMTYIGDIELAFVTIEYIMRDIKFGWLIRYIHANGASFFFMAIYCHIFRGLYYGSYKEPRQPLWWSGAIIFLWSMATAFMGYILPWGQMSFWAATVITQMLTIIPKIGKRILIWLWGGWVVGNPTLHRFYSLHFIFPFVLVGLVFIHLGLLHKDGSNNPLGIKTRLSNINFYPYFYVKDLLSFFVMLFVLSIFVFYYPNFLLDPLNYIDADPFDTPPHIVPEWYFLPYYSVLRSVPHKLGGIFAMGAAIGLIFIHPMFDTSNIRSGNFRPIYATTFWFFVTVLGCLAHSGAFNIQPEDHKITHLPEGLEYYANFGRVLSVLYFLCFFLLGI-SGRAEE 387          
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Match: A0A7T4WR44_9STRA (Cytochrome b n=1 Tax=Odontella regia TaxID=1335017 RepID=A0A7T4WR44_9STRA)

HSP 1 Score: 521 bits (1341), Expect = 4.590e-182
Identity = 242/382 (63.35%), Postives = 292/382 (76.44%), Query Frame = 1
Query:    4 FLGHKMARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGKLEKIL 1149
            F  +K  R N + +++ +D+H+I YPT +NL+Y WSFGSSAG CLVIQILSG FLAMHY      AFSSVEHIMRDV +GWLIRY+HANGAS FFIVVY HIFRGLYYGSY++PRQQLW SG +I++LMM TAF+GYVLPWGQMSFWGATVITSL +  P +G+ +V WLWGGFTV N TLNRFFSLH+LLPF IAGL  +HL LLHKDGSNNPLG+ ++T  + FYPY + KDL A    +   SI +FYFPN LG PDNY+ ADP  TPAHIVPEWYFLPFYAILR IP+K+GG++ MGGA+ I+ + P  NTS +RS  FRPI+ + +WL +ADF +L W G  PV D F +VG V ++ YF FF F    +G +E  L
Sbjct:   32 FFINKTLRWNKSYLLAVLDNHLIHYPTPLNLSYAWSFGSSAGVCLVIQILSGVFLAMHYTPHIDLAFSSVEHIMRDVNNGWLIRYIHANGASMFFIVVYCHIFRGLYYGSYIQPRQQLWCSGVIIFILMMGTAFMGYVLPWGQMSFWGATVITSLVTAVPVVGQSIVDWLWGGFTVNNATLNRFFSLHFLLPFAIAGLTLIHLALLHKDGSNNPLGVASETDKIAFYPYYFTKDLYAILCFIGFFSIFVFYFPNVLGHPDNYIPADPMQTPAHIVPEWYFLPFYAILRSIPDKLGGVVAMGGALLILLIIPFTNTSEIRSTTFRPIFKIFYWLLVADFLILGWIGQKPVKDIFVVVGQVATVFYFLFFAFLIPLIGLIENYL 413          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12549.2061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZES8_ECTSI3.110e-28097.11Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepI... [more]
D0IPB5_SACJA1.200e-27495.00Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A0A7LKY8_SACLA1.820e-26993.95Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A8F0FCD4_9PHAE7.940e-26491.58Cytochrome b n=1 Tax=Laminaria ephemera TaxID=3093... [more]
A0A0U1WNN6_SARFS5.390e-25386.21Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A... [more]
A0A8E8PEC1_9PHAE7.610e-23880.79Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=224924... [more]
Q2TUA7_DICDH2.540e-23177.51Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID... [more]
A0A7S6UA51_9STRA7.920e-20170.37Cytochrome b n=1 Tax=Schizocladia ischiensis TaxID... [more]
A0A4Y5T8W2_9PHAE2.180e-18261.86Cytochrome b n=1 Tax=Ishige okamurae TaxID=233772 ... [more]
A0A7T4WR44_9STRA4.590e-18263.35Cytochrome b n=1 Tax=Odontella regia TaxID=1335017... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12549contigL-elsbetiae_contig12549:2956..4125 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score466.5
Seed ortholog evalue1.2e-128
Seed eggNOG ortholog3075.A0A087S9Z1
Preferred namecob
KEGG koko:K00412
KEGG Pathwayko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis
EggNOG OGs34GP0@3041,37PDF@33090,COG1290@1,KOG4663@2759
COG Functional cat.C
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03029
Exons1
Model size1170
Cds size1152
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815447.5694451-CDS-L-elsbetiae_contig12549:2955..41071622815447.5694451-CDS-L-elsbetiae_contig12549:2955..4107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12549 2956..4107 -
1691682902.806483-CDS-L-elsbetiae_contig12549:2955..41071691682902.806483-CDS-L-elsbetiae_contig12549:2955..4107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12549 2956..4107 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815447.5806446-UTR-L-elsbetiae_contig12549:4107..41251622815447.5806446-UTR-L-elsbetiae_contig12549:4107..4125Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12549 4108..4125 -
1691682902.816515-UTR-L-elsbetiae_contig12549:4107..41251691682902.816515-UTR-L-elsbetiae_contig12549:4107..4125Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12549 4108..4125 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12549.2061.1prot_L-elsbetiae_contig12549.2061.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12549 2956..4107 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12549.2061.1

>prot_L-elsbetiae_contig12549.2061.1 ID=prot_L-elsbetiae_contig12549.2061.1|Name=mRNA_L-elsbetiae_contig12549.2061.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=384bp
MARLNLNSIISWVDSHIIDYPTAMNLNYNWSFGSSAGFCLVIQILSGAFL
AMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRG
LYYGSYMEPRQQLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSL
FSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFVIAGLVFVHLGL
LHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFALLSVLSIVIFYFPNS
LGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIA
IIFLYPLLNTSILRSANFRPIYAVVFWLFLADFCLLAWSGTTPVDDYFKI
VGAVVSIGYFAFFVFGGLFVGKLEKILAFRAFA*
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mRNA from alignment at L-elsbetiae_contig12549:2956..4125-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12549.2061.1 ID=mRNA_L-elsbetiae_contig12549.2061.1|Name=mRNA_L-elsbetiae_contig12549.2061.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig12549:2956..4125- (Laminarionema elsbetiae ELsaHSoW15)
ATATTCCTTGGTCACAAAATGGCAAGATTGAATCTAAATTCCATAATTAG TTGGGTAGATTCGCATATTATTGACTATCCAACAGCTATGAACTTAAATT ATAATTGGAGTTTCGGTTCATCTGCTGGTTTTTGTCTTGTTATTCAAATT TTAAGTGGGGCTTTTTTAGCTATGCATTATGCTGGTGAAACTCATTATGC TTTTTCAAGTGTAGAGCATATTATGCGTGATGTTAAAAGTGGTTGGTTAA TTCGTTACATGCATGCTAATGGTGCTTCTTTTTTTTTTATTGTTGTTTAT GCTCATATATTTAGAGGCCTTTATTATGGTTCATATATGGAGCCTCGTCA GCAACTTTGGTGGTCAGGTGCTGTTATTTATGTACTAATGATGGCAACTG CTTTTATTGGTTATGTATTGCCTTGGGGTCAAATGAGCTTTTGGGGTGCT ACTGTTATTACAAGTTTATTTTCTATTTTTCCTTTTATAGGTAAAGAAGT AGTTATGTGGCTTTGGGGCGGTTTTACTGTAGGAAATCCTACTCTAAATA GATTTTTCAGTCTACATTATTTATTACCTTTTGTAATCGCAGGTTTAGTT TTTGTTCATTTAGGTTTGCTTCACAAAGATGGATCTAACAACCCTTTAGG TATAAAAACTAAAACGGCAAATGTTAATTTTTATCCTTATATGTATGTAA AAGATTTAGTGGCGTTTTTTGCTCTATTATCTGTATTATCTATTGTTATT TTTTATTTTCCTAATAGTTTAGGGGATCCGGATAATTATTTAGAAGCAGA TCCTTATGGTACTCCTGCGCATATTGTGCCTGAATGGTATTTTTTACCTT TTTATGCTATTTTACGTGTAATTCCTAATAAAGTAGGTGGAATTTTAACT ATGGGTGGTGCTATCGCTATTATTTTTTTATACCCACTTTTAAACACTTC TATATTACGTAGTGCTAATTTCCGTCCTATATATGCTGTAGTTTTTTGGC TTTTTTTAGCTGATTTTTGTTTACTAGCTTGGTCAGGTACTACTCCAGTT GACGATTACTTTAAAATTGTAGGGGCTGTTGTTTCTATTGGTTACTTTGC TTTTTTTGTTTTTGGGGGCTTATTTGTTGGTAAGTTAGAAAAAATTCTTG CTTTTCGAGCATTTGCCTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12549:2956..4125-

>mRNA_L-elsbetiae_contig12549.2061.1 ID=mRNA_L-elsbetiae_contig12549.2061.1|Name=mRNA_L-elsbetiae_contig12549.2061.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2304bp|location=Sequence derived from alignment at L-elsbetiae_contig12549:2956..4125- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAAGATTGAATCTAAATTCCATAATTAGTTGGGTAGATTCGCATAT
TATTGACTATCCAACAGCTATGAACTTAAATTATAATTGGAGTTTCGGTT
CATCTGCTGGTTTTTGTCTTGTTATTCAAATTTTAAGTGGGGCTTTTTTA
GCTATGCATTATGCTGGTGAAACTCATTATGCTTTTTCAAGTGTAGAGCA
TATTATGCGTGATGTTAAAAGTGGTTGGTTAATTCGTTACATGCATGCTA
ATGGTGCTTCTTTTTTTTTTATTGTTGTTTATGCTCATATATTTAGAGGC
CTTTATTATGGTTCATATATGGAGCCTCGTCAGCAACTTTGGTGGTCAGG
TGCTGTTATTTATGTACTAATGATGGCAACTGCTTTTATTGGTTATGTAT
TGCCTTGGGGTCAAATGAGCTTTTGGGGTGCTACTGTTATTACAAGTTTA
TTTTCTATTTTTCCTTTTATAGGTAAAGAAGTAGTTATGTGGCTTTGGGG
CGGTTTTACTGTAGGAAATCCTACTCTAAATAGATTTTTCAGTCTACATT
ATTTATTACCTTTTGTAATCGCAGGTTTAGTTTTTGTTCATTTAGGTTTG
CTTCACAAAGATGGATCTAACAACCCTTTAGGTATAAAAACTAAAACGGC
AAATGTTAATTTTTATCCTTATATGTATGTAAAAGATTTAGTGGCGTTTT
TTGCTCTATTATCTGTATTATCTATTGTTATTTTTTATTTTCCTAATAGT
TTAGGGGATCCGGATAATTATTTAGAAGCAGATCCTTATGGTACTCCTGC
GCATATTGTGCCTGAATGGTATTTTTTACCTTTTTATGCTATTTTACGTG
TAATTCCTAATAAAGTAGGTGGAATTTTAACTATGGGTGGTGCTATCGCT
ATTATTTTTTTATACCCACTTTTAAACACTTCTATATTACGTAGTGCTAA
TTTCCGTCCTATATATGCTGTAGTTTTTTGGCTTTTTTTAGCTGATTTTT
GTTTACTAGCTTGGTCAGGTACTACTCCAGTTGACGATTACTTTAAAATT
GTAGGGGCTGTTGTTTCTATTGGTTACTTTGCTTTTTTTGTTTTTGGGGG
CTTATTTGTTGGTAAGTTAGAAAAAATTCTTGCTTTTCGAGCATTTGCCT
AAATGGCAAGATTGAATCTAAATTCCATAATTAGTTGGGTAGATTCGCAT
ATTATTGACTATCCAACAGCTATGAACTTAAATTATAATTGGAGTTTCGG
TTCATCTGCTGGTTTTTGTCTTGTTATTCAAATTTTAAGTGGGGCTTTTT
TAGCTATGCATTATGCTGGTGAAACTCATTATGCTTTTTCAAGTGTAGAG
CATATTATGCGTGATGTTAAAAGTGGTTGGTTAATTCGTTACATGCATGC
TAATGGTGCTTCTTTTTTTTTTATTGTTGTTTATGCTCATATATTTAGAG
GCCTTTATTATGGTTCATATATGGAGCCTCGTCAGCAACTTTGGTGGTCA
GGTGCTGTTATTTATGTACTAATGATGGCAACTGCTTTTATTGGTTATGT
ATTGCCTTGGGGTCAAATGAGCTTTTGGGGTGCTACTGTTATTACAAGTT
TATTTTCTATTTTTCCTTTTATAGGTAAAGAAGTAGTTATGTGGCTTTGG
GGCGGTTTTACTGTAGGAAATCCTACTCTAAATAGATTTTTCAGTCTACA
TTATTTATTACCTTTTGTAATCGCAGGTTTAGTTTTTGTTCATTTAGGTT
TGCTTCACAAAGATGGATCTAACAACCCTTTAGGTATAAAAACTAAAACG
GCAAATGTTAATTTTTATCCTTATATGTATGTAAAAGATTTAGTGGCGTT
TTTTGCTCTATTATCTGTATTATCTATTGTTATTTTTTATTTTCCTAATA
GTTTAGGGGATCCGGATAATTATTTAGAAGCAGATCCTTATGGTACTCCT
GCGCATATTGTGCCTGAATGGTATTTTTTACCTTTTTATGCTATTTTACG
TGTAATTCCTAATAAAGTAGGTGGAATTTTAACTATGGGTGGTGCTATCG
CTATTATTTTTTTATACCCACTTTTAAACACTTCTATATTACGTAGTGCT
AATTTCCGTCCTATATATGCTGTAGTTTTTTGGCTTTTTTTAGCTGATTT
TTGTTTACTAGCTTGGTCAGGTACTACTCCAGTTGACGATTACTTTAAAA
TTGTAGGGGCTGTTGTTTCTATTGGTTACTTTGCTTTTTTTGTTTTTGGG
GGCTTATTTGTTGGTAAGTTAGAAAAAATTCTTGCTTTTCGAGCATTTGC
CTAA
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