mRNA_L-elsbetiae_contig1254.2056.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1254.2056.1
Unique NamemRNA_L-elsbetiae_contig1254.2056.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: A0A6H5JHK6_9PHAE (PHB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHK6_9PHAE)

HSP 1 Score: 431 bits (1109), Expect = 1.090e-143
Identity = 230/337 (68.25%), Postives = 258/337 (76.56%), Query Frame = 1 
Query:   25 LVWLAALGAVCAVAGPVLLSPFAVQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYEDYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMPEYIHDRHQQNXXXXXXHHSDDGIGVNAARGAAAFW 1035
            LVWLA +GA+ AVAGPVLLSP+A++ VGEGSVGVLRFGG+VLD+ KAPG+HFVLPFLYEL EVPVNVRTTE++ VPCGTSGGVLV+FP VEI+HRLHPASVVST++AYEDYEQAW+I RV+HDV  LCA+ SL E+    FDQLD+M+     E  S WVPGLMI+AARVAKP IP QL  DFVRVEEEISKLKVAHQHE LV+RNAE ERSRQVM AE +R+I  MTM          L I R            H+DAA YSKLREAEGNERRLSPAFLE ARQKALYQNLEAYYG+RMPEY+      N        S   +G  AARGAAAFW
Sbjct:   29 LVWLAVIGAISAVAGPVLLSPYAIKSVGEGSVGVLRFGGKVLDEIKAPGYHFVLPFLYELIEVPVNVRTTEVRQVPCGTSGGVLVYFPLVEIIHRLHPASVVSTLKAYEDYEQAWIIDRVRHDVKLLCARHSLHEVHIDKFDQLDDML-----ETASAWVPGLMIVAARVAKPTIPSQLHGDFVRVEEEISKLKVAHQHEQLVVRNAEMERSRQVMAAENDRDIARMTMXXXXXXXXXXLRIHRIQDEMHLTRSKDHADAASYSKLREAEGNERRLSPAFLEQARQKALYQNLEAYYGNRMPEYVKVNSNSNRLDGGEGGS---VGSEAARGAAAFW 357
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: A0A7M7NES8_STRPU (PHB domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NES8_STRPU)

HSP 1 Score: 197 bits (502), Expect = 6.810e-54
Identity = 104/282 (36.88%), Postives = 173/282 (61.35%), Query Frame = 1 
Query:   88 FAVQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYE-DYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMP 930
            FA+  + EG VGV   GG +L  T  PGFH ++PFL     V   ++T E+K VPCGTSGGV+++F  +E+V++L  + V  TV+ Y  DY++  +  +V H++N+ C+  +L E++   FDQ+DE +   L+E+++V  PGL I A RV KP IP  ++ ++  +E E +KL +A QH+ +V + AE +R R V+ AEK  ++  +T A+++ EKE++  I               +DA  YS ++E + N+ +L+P +LE+ + +AL  N + Y+G+ +P
Sbjct:   21 FAIHRIDEGHVGVYYRGGALLQTTSGPGFHVMVPFLTSYRSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNQLRQSVVFETVKNYTADYDKTLIFNKVHHELNQFCSAHNLQEVYIELFDQIDENLKKALQEDLTVMSPGLTIQAVRVTKPKIPESIRKNYELMENEKTKLLIAAQHQKVVEKEAETDRKRAVIEAEKIAQVAGITFAQKIMEKESEQKISIIEDETHLAKQKARADAQLYSSVQETKANQEKLTPQYLEMLKYQALTANTKIYFGNDIP 302
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: A0A2I4CRI7_9TELE (erlin-2 isoform X1 n=8 Tax=Percomorphaceae TaxID=1489872 RepID=A0A2I4CRI7_9TELE)

HSP 1 Score: 196 bits (498), Expect = 2.540e-53
Identity = 113/310 (36.45%), Postives = 183/310 (59.03%), Query Frame = 1 
Query:   31 WLAALGAV----CAVAGPVLLSPFAVQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYE-DYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMPEYIHD 945
            W+A LGAV     A+ G  LL+  +V  + EG  GV   GG +L  T  PGFH +LPF+     V   ++T E+K VPCGTSGGV+++F  +E+V+ L P++V   VR +  DY++A +  +V H++N+ C+  SL E++   FDQ+DE +   L+E+++   PGL+I A RV KP IP  ++ ++  +E E +KL ++ Q + +V + AE ER + V+ AEK  ++  +   ++V EKE +  I               +DA  Y+ LR AE N+ +L+P +L+L + KA+  N + Y+G+ +P+   D
Sbjct:   16 WMAQLGAVFSIIAALGGAALLA--SVHKIDEGHTGVYYRGGALLTTTSGPGFHLMLPFITTFKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNYLIPSAVYDIVRNFTADYDKALIFNKVHHELNQFCSVHSLQEVYIGLFDQIDENLKLTLQEDLTSMAPGLIIQAVRVTKPNIPESIRRNYELMESEKTKLLISQQTQKVVEKEAETERIKAVIEAEKVAQVAEIKFGQKVMEKETEKKISEIEDNAFLARQKAKADAEFYTALRAAEANKLKLTPEYLQLMKYKAIAANSKIYFGNDIPQMFVD 323
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: T2MIC8_HYDVU (Erlin-2 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MIC8_HYDVU)

HSP 1 Score: 195 bits (496), Expect = 2.770e-53
Identity = 106/286 (37.06%), Postives = 173/286 (60.49%), Query Frame = 1 
Query:   76 LLSPFAVQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYE-DYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMP 930
            L++ F++  V EG V V   GG +L  T  PGFH ++PFL     V   ++T E+K VPCGTSGGV+++F  +E+V+ L PA+V   V++Y  DY++A +  +V H++N+ C+  SL E++   FDQ+DE +   L+E+++V  PGL I A RV KP IP Q++ ++  +E E +KL +  QH+ +V + AE  R   ++ AEK+ ++  +T  +++ EKE+   I               +DA  Y +++  E N+ +L+P FLE  R +A+ QN + YYG+ +P
Sbjct:   18 LIANFSIHKVEEGHVAVYYRGGALLSTTSGPGFHMMIPFLTSFRPVQTTLQTDEVKNVPCGTSGGVVIYFDRIEVVNILKPAAVYEIVKSYTADYDKALIFNKVHHELNQFCSVHSLQEVYIDLFDQIDENLKKALQEDLTVMAPGLNIQAVRVTKPKIPEQIRKNYELMEAEKTKLLITIQHQKVVEKEAETGRKLAIIEAEKSSQVAQITYNQKIMEKESQKKISEIEDSTHLAKEKAIADAEFYKQVKLIESNKMKLTPEFLEYTRIQAIGQNNKVYYGNTIP 303
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: A0A6Q2Z8L6_ESOLU (Cholesterol 25-hydroxylase like 3 n=2 Tax=Esox lucius TaxID=8010 RepID=A0A6Q2Z8L6_ESOLU)

HSP 1 Score: 195 bits (495), Expect = 5.650e-53
Identity = 110/312 (35.26%), Postives = 184/312 (58.97%), Query Frame = 1 
Query:   25 LVWLAALGAV----CAVAGPVLLSPFAVQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYE-DYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMPEYIHD 945
            + W+A LGA+    CA+ G  L +  +V  + EG  GV   GG +L  T +PGFH ++PF+     V   ++T E+K VPCGTSGGV+++F  +E+V+ L P++V   VR +  DY++A +  +V H++N+ C+  SL E++   FDQ+DE +   L+E+++   PGL+I A RV KP IP  ++ ++  +E E +KL ++ Q + +V + AE ER R V+ AEK  ++  +  +++V EKE +  I               +DA  Y+  R AE N+ +L+P +L+L + +A+  N + Y+G  +P+   D
Sbjct:    1 MTWMAQLGAIASIICAIGGASLFA--SVHKIEEGHTGVYYRGGALLTTTSSPGFHLMMPFITSFKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNYLVPSAVYDIVRNFTADYDKALIFNKVHHELNQFCSVHSLQEVYIGLFDQIDENLKLTLQEDLTNMAPGLIIQAVRVTKPNIPESIRRNYEMMEAEKTKLLISAQTQKVVEKEAETERKRAVIEAEKVAQVAEIKFSQKVMEKETEKKISEIEDTAFLAKMRARADAELYTAQRTAEANKLKLTPEYLQLMKFQAIAANSKIYFGSEIPQMFVD 310
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: UPI001BB0E7C9 (erlin-2-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB0E7C9)

HSP 1 Score: 195 bits (495), Expect = 7.600e-53
Identity = 100/282 (35.46%), Postives = 171/282 (60.64%), Query Frame = 1 
Query:   88 FAVQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYE-DYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMP 930
            FA+  + EG VGV   GG +L  T  PGFH ++PF+     V   ++T E+K VPCGTSGGV+++F  +E+V++L    V  TV+ Y  DY++  +  +V H++N+ C+  +L E++   FDQ+DE +   L+E+++   PGL I A RV KP IP  ++ ++  +E E +KL +A QH+ +V + AE +R R V+ AEK  ++  +T ++++ EKE++  I               +DA  Y+ ++E + N+ +L+P +LE+ + +AL  N + Y+G+ +P
Sbjct:   21 FAIHRIDEGHVGVYYRGGALLQSTSGPGFHVMIPFITSYRSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNQLSQNVVYETVKNYTADYDKTLIFNKVHHELNQFCSAHNLQEVYIELFDQIDENLKRALQEDLTSMAPGLTIQAVRVTKPKIPESIRKNYELMENEKTKLLIAAQHQRVVEKEAETDRKRAVIEAEKIAQVAEITFSQKIMEKESEQRISTIEDETHLAKMKARADAQLYTSIQETKANQEKLTPQYLEMLKYQALTANTKIYFGNEIP 302
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: A0A224XN48_9HEMI (Putative prohibitin-related membrane protease subunit n=6 Tax=Triatominae TaxID=70999 RepID=A0A224XN48_9HEMI)

HSP 1 Score: 193 bits (491), Expect = 1.740e-52
Identity = 102/289 (35.29%), Postives = 171/289 (59.17%), Query Frame = 1 
Query:   76 LLSPFAVQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYE-DYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMPEYI 939
            +L  F++  V EG V V   GG +L +T  PGFH ++P +     V V ++T E+K VPCGTSGGV+++F  +E+V+ LHP SV   V+ Y  DY++  +  +V H++N+ C+  +L E++   FDQ+DE +   L+ +++   PGL I A RV KP IP  ++ ++  +E E +KL +AH+H+ +V ++AE ER + ++ AEK  ++  +   +++ EKE+   +              H+DA  Y   R+AE N+  L+P +LE+ R +A+  N + YYG  +P + 
Sbjct:   17 ILMNFSIHKVEEGHVAVYYRGGALLSQTSNPGFHMMVPLITSYRTVQVTLQTDEVKNVPCGTSGGVMIYFDRIEVVNHLHPNSVFDIVKNYTADYDKTLIFNKVHHELNQFCSVHNLHEVYIDLFDQIDENLKNALQRDLNEMAPGLKIQAVRVTKPKIPETIRKNYELMENEKTKLLIAHEHQKVVAKDAETERKKALIEAEKVAQVSRIQYDQKIMEKESLQRMSEIEDLIHLARQKSHTDAEFYQIQRQAEANKLLLTPEYLEMKRTEAIANNAKVYYGPNIPNFF 305
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: A0A6V3ZEX0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6V3ZEX0_9EUKA)

HSP 1 Score: 192 bits (489), Expect = 2.490e-52
Identity = 111/309 (35.92%), Postives = 176/309 (56.96%), Query Frame = 1 
Query:   25 LVWLAALGAVCAVAGPVLLSPFA-VQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYE-DYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMPEYIHD 945
            L+ LA  GAV A     LL+P A +  + EG VGV   GG +LD+   PGFH + P +     V V V+T ++K +PCGTS G ++HF  +E+V++L  ++V + V+ Y  DY++ W+  ++ H++N+ C+Q +L E++   FD LDE +   L+ ++  W PGL II+ RV KP +P  +Q ++ ++E E ++LKVA Q + LV + AE ER R V+ AEK   + ++ +   + EK  +  I               +DA  Y   +EAE N  RL+P  + L   +AL  N + Y+G+R+P    D
Sbjct:    3 LITLATSGAVMA-----LLAPLAGLHRIPEGHVGVYWRGGALLDRVTPPGFHMMTPLITSYAPVQVTVQTDKVKDIPCGTSSGTVIHFDKIEVVNQLTASAVHAVVKNYTTDYDKTWIFDKIHHEINQFCSQHTLQEVYIDKFDTLDETLKEILQRDIDQWAPGLNIISIRVTKPRVPPGIQKNYEQIESEKTRLKVAEQTQRLVEKEAETERKRAVIEAEKVAMVRAIGLNLTLAEKMNEQQIADVQNRMETARVRAEADAEFYRAQKEAEANRLRLTPEVIALETARALANNTKVYFGERIPSMFAD 306
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: A0A2G8K939_STIJA (Putative erlin-1-like isoform X2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K939_STIJA)

HSP 1 Score: 192 bits (489), Expect = 3.370e-52
Identity = 104/282 (36.88%), Postives = 168/282 (59.57%), Query Frame = 1 
Query:   88 FAVQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYE-DYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMP 930
            FAV  + EG VGV   GG +L  T APG+H +LPFL     V   ++T E+K VPCGTSGGV+++F  +E+V+ LH   V STV+ Y  DY++  +  +V H++N+ C+  +L E++   FDQ+DE +   L+E+++   PGL + A RV KP IP  ++ ++  +E E + L +A QH+ +V + AE +R R V+ AEK  ++ ++T  +++ EKE++  I               +DA  Y   REAE N  +L+P +LE+ + +A+    + Y+G  +P
Sbjct:   21 FAVHKIEEGHVGVYYRGGALLKSTSAPGYHTMLPFLTTFRSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNYLHTDHVHSTVKQYTADYDKTLIFNKVHHELNQFCSSHNLQEVYIELFDQIDENLKKALQEDLNKMAPGLTVHAVRVTKPKIPETIRKNYELMENEKTMLLIAVQHQKVVEKEAETDRKRAVIEAEKLSQVATITYKQKIMEKESEKRISEIEDETHLAKERARADAEFYKSQREAESNNVKLTPQYLEMMKYQAIATTEKVYFGKDIP 302
[Close]
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Match: A0A671XPY4_SPAAU (Erlin-2 n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671XPY4_SPAAU)

HSP 1 Score: 192 bits (488), Expect = 3.760e-52
Identity = 109/310 (35.16%), Postives = 181/310 (58.39%), Query Frame = 1 
Query:   19 RPLVWLAALGAVCAVAGPVLLSPFAVQVVGEGSVGVLRFGGRVLDKTKAPGFHFVLPFLYELTEVPVNVRTTEMKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYE-DYEQAWVIPRVKHDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVAKPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKNREIGSMTMAREVEEKEADLHIQRXXXXXXXXXXXXHSDAAGYSKLREAEGNERRLSPAFLELARQKALYQNLEAYYGDRMPEYIHD 945
            R   W A    + A+ G  LL+  +V  + EG  GV   GG +L  T +PGFH +LPF+     V   ++T E+K VPCGTSGGV+++F  +E+V+ L P++V   VR +  DY++A +  +V H++N+ C+  SL E++   FDQ+DE +   L+E+++   PGL+I A RV KP IP  ++ ++  +E E +KL ++ Q + +V + AE ER + V+ AEK  ++  +   ++V EKE +  I +             +DA  Y+  R AE N+ +L+P +L+L + KA+  N + Y+G+ +P+   D
Sbjct:    2 RMAQWGAIFSIIAALGGAALLA--SVHKIDEGHTGVYYRGGALLTTTSSPGFHLMLPFITTYKSVQTTIQTDEVKNVPCGTSGGVMIYFDRIEVVNYLVPSAVFDIVRNFTADYDKALIFNKVHHELNQFCSVHSLQEVYIGLFDQIDENLKLTLQEDLTNMAPGLIIQAVRVTKPNIPESIRRNYELMESEKTKLLISQQTQKVVEKEAETERIKAVIEAEKVAQVAEIKFGQKVMEKETEKRISQIEDGAFLAREKARADAEFYTAQRVAEANKIKLTPEYLQLMKYKAIAANSKIYFGNDIPQMFVD 309
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1254.2056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHK6_9PHAE1.090e-14368.25PHB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7M7NES8_STRPU6.810e-5436.88PHB domain-containing protein n=1 Tax=Strongylocen... [more]
A0A2I4CRI7_9TELE2.540e-5336.45erlin-2 isoform X1 n=8 Tax=Percomorphaceae TaxID=1... [more]
T2MIC8_HYDVU2.770e-5337.06Erlin-2 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2... [more]
A0A6Q2Z8L6_ESOLU5.650e-5335.26Cholesterol 25-hydroxylase like 3 n=2 Tax=Esox luc... [more]
UPI001BB0E7C97.600e-5335.46erlin-2-like isoform X1 n=2 Tax=Lytechinus variega... [more]
A0A224XN48_9HEMI1.740e-5235.29Putative prohibitin-related membrane protease subu... [more]
A0A6V3ZEX0_9EUKA2.490e-5235.92Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A2G8K939_STIJA3.370e-5236.88Putative erlin-1-like isoform X2 n=1 Tax=Stichopus... [more]
A0A671XPY4_SPAAU3.760e-5235.16Erlin-2 n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1254contigL-elsbetiae_contig1254:4002..11740 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.8
Seed ortholog evalue3.8e-95
Seed eggNOG ortholog2880.D7G2K3
Preferred nameERLIN2
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0005488,GO:0005496,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006950,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0010894,GO:0012505,GO:0015485,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018108,GO:0018193,GO:0018212,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0023052,GO:0030163,GO:0030433,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031625,GO:0031984,GO:0032933,GO:0032934,GO:0032991,GO:0033554,GO:0034976,GO:0036094,GO:0036211,GO:0036503,GO:0042175,GO:0042221,GO:0042304,GO:0043161,GO:0043170,GO:0043178,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045121,GO:0045540,GO:0045541,GO:0045717,GO:0045833,GO:0045893,GO:0045922,GO:0045935,GO:0045939,GO:0045944,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051055,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051603,GO:0051716,GO:0055085,GO:0060255,GO:0062012,GO:0062014,GO:0065007,GO:0071501,GO:0071704,GO:0071944,GO:0080090,GO:0090181,GO:0090206,GO:0097159,GO:0098589,GO:0098805,GO:0098827,GO:0098857,GO:0106118,GO:0106119,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1902680,GO:1902930,GO:1902931,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.SREBP signaling pathway
EggNOG OGsKOG2962@1,KOG2962@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionBand 7 protein
Ec32 orthologEc-11_002550.1
Exons11
Model size1980
Cds size843
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815447.02761-UTR-L-elsbetiae_contig1254:4001..49011622815447.02761-UTR-L-elsbetiae_contig1254:4001..4901Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1254 4002..4901 -
1691682902.466023-UTR-L-elsbetiae_contig1254:4001..49011691682902.466023-UTR-L-elsbetiae_contig1254:4001..4901Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1254 4002..4901 -
1622815447.1399958-UTR-L-elsbetiae_contig1254:10193..102001622815447.1399958-UTR-L-elsbetiae_contig1254:10193..10200Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1254 10194..10200 -
1691682902.5878417-UTR-L-elsbetiae_contig1254:10193..102001691682902.5878417-UTR-L-elsbetiae_contig1254:10193..10200Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1254 10194..10200 -
1622815447.1528144-UTR-L-elsbetiae_contig1254:11199..113381622815447.1528144-UTR-L-elsbetiae_contig1254:11199..11338Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1254 11200..11338 -
1691682902.6010303-UTR-L-elsbetiae_contig1254:11199..113381691682902.6010303-UTR-L-elsbetiae_contig1254:11199..11338Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1254 11200..11338 -
1622815447.1642284-UTR-L-elsbetiae_contig1254:11649..117401622815447.1642284-UTR-L-elsbetiae_contig1254:11649..11740Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1254 11650..11740 -
1691682902.611726-UTR-L-elsbetiae_contig1254:11649..117401691682902.611726-UTR-L-elsbetiae_contig1254:11649..11740Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1254 11650..11740 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815447.0386155-CDS-L-elsbetiae_contig1254:4901..50751622815447.0386155-CDS-L-elsbetiae_contig1254:4901..5075Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 4902..5075 -
1691682902.4824536-CDS-L-elsbetiae_contig1254:4901..50751691682902.4824536-CDS-L-elsbetiae_contig1254:4901..5075Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 4902..5075 -
1622815447.0514596-CDS-L-elsbetiae_contig1254:5534..56121622815447.0514596-CDS-L-elsbetiae_contig1254:5534..5612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 5535..5612 -
1691682902.4935622-CDS-L-elsbetiae_contig1254:5534..56121691682902.4935622-CDS-L-elsbetiae_contig1254:5534..5612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 5535..5612 -
1622815447.0626063-CDS-L-elsbetiae_contig1254:6139..62041622815447.0626063-CDS-L-elsbetiae_contig1254:6139..6204Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 6140..6204 -
1691682902.5085878-CDS-L-elsbetiae_contig1254:6139..62041691682902.5085878-CDS-L-elsbetiae_contig1254:6139..6204Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 6140..6204 -
1622815447.0734825-CDS-L-elsbetiae_contig1254:6461..65581622815447.0734825-CDS-L-elsbetiae_contig1254:6461..6558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 6462..6558 -
1691682902.5168338-CDS-L-elsbetiae_contig1254:6461..65581691682902.5168338-CDS-L-elsbetiae_contig1254:6461..6558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 6462..6558 -
1622815447.0854158-CDS-L-elsbetiae_contig1254:7241..73011622815447.0854158-CDS-L-elsbetiae_contig1254:7241..7301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 7242..7301 -
1691682902.525135-CDS-L-elsbetiae_contig1254:7241..73011691682902.525135-CDS-L-elsbetiae_contig1254:7241..7301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 7242..7301 -
1622815447.09588-CDS-L-elsbetiae_contig1254:7811..79341622815447.09588-CDS-L-elsbetiae_contig1254:7811..7934Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 7812..7934 -
1691682902.5330575-CDS-L-elsbetiae_contig1254:7811..79341691682902.5330575-CDS-L-elsbetiae_contig1254:7811..7934Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 7812..7934 -
1622815447.105467-CDS-L-elsbetiae_contig1254:8526..86251622815447.105467-CDS-L-elsbetiae_contig1254:8526..8625Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 8527..8625 -
1691682902.5422058-CDS-L-elsbetiae_contig1254:8526..86251691682902.5422058-CDS-L-elsbetiae_contig1254:8526..8625Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 8527..8625 -
1622815447.1149077-CDS-L-elsbetiae_contig1254:9722..97741622815447.1149077-CDS-L-elsbetiae_contig1254:9722..9774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 9723..9774 -
1691682902.5517926-CDS-L-elsbetiae_contig1254:9722..97741691682902.5517926-CDS-L-elsbetiae_contig1254:9722..9774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 9723..9774 -
1622815447.1243393-CDS-L-elsbetiae_contig1254:10098..101931622815447.1243393-CDS-L-elsbetiae_contig1254:10098..10193Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 10099..10193 -
1691682902.568628-CDS-L-elsbetiae_contig1254:10098..101931691682902.568628-CDS-L-elsbetiae_contig1254:10098..10193Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1254 10099..10193 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1254.2056.1prot_L-elsbetiae_contig1254.2056.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1254 4902..10193 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1254.2056.1

>prot_L-elsbetiae_contig1254.2056.1 ID=prot_L-elsbetiae_contig1254.2056.1|Name=mRNA_L-elsbetiae_contig1254.2056.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=281bp
MKAVPCGTSGGVLVHFPTVEIVHRLHPASVVSTVRAYEDYEQAWVIPRVK
HDVNKLCAQMSLTEIFTSSFDQLDEMIVANLKENVSVWVPGLMIIAARVA
KPVIPRQLQADFVRVEEEISKLKVAHQHEHLVIRNAENERSRQVMIAEKN
REIGSMTMAREVEEKEADLHIQRIQDEMHVARSKDHSDAAGYSKLREAEG
NERRLSPAFLELARQKALYQNLEAYYGDRMPEYIHDRHQQNQQQQRQHHS
DDGIGVNAARGAAAFWRGADTIDTARTAAA*
back to top

mRNA from alignment at L-elsbetiae_contig1254:4002..11740-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1254.2056.1 ID=mRNA_L-elsbetiae_contig1254.2056.1|Name=mRNA_L-elsbetiae_contig1254.2056.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7739bp|location=Sequence derived from alignment at L-elsbetiae_contig1254:4002..11740- (Laminarionema elsbetiae ELsaHSoW15)
GCTGGTGTTGGACATCGACGACCCCTTGTATGGCTGGCTGCGCTTGGTGC
CGTATGTGCTGTGGCTGGGCCCGTTCTGCTTTCTCCATTTGGTACGGTAT
TCTTCGATAAAATCCTCCGGGCGAGGATCATGGAGAGAGAAATGTGTTGG
GTACGGATCTCCGCCTGTGCAGGACCTAGTAGATATAGATACACATACAT
ACCTACGCGTGCCTGCTGCAATGCGCGTGCTGGTGCCCCAGTTCACTTTG
TCCGTATTGACCCCACCGATTTGCATGAGCTGAGCGGTTTGGGGTAGATA
CATATCTGCGCGAACCACAGACAGCGTAGGTCTCGGTCATTTTTCACGTT
CTCCCCCCCCCCCCCCTGCGCGGGGCGTGTGTGCCTTCATCTCACGCATC
AGCTGTGCAGGTGGTAGGGGAGGGCTCTGTGGGGGTGCTGCGTTTCGGGG
GTAGGGTTCTGGACAAGACCAAAGCCCCTGGCTTTCATTTCGTGCTGCCA
TTCTTGTACGAGCTCACCGAGGTGCCGGTAAACGTCAGGACGTGAGTGCG
CACCCTGCTAAAAATTGTTTCAATGAGGAACCCGGCTCTAATGTGCAGCA
CTGGTTACACACTGATAATAGATCTTTAGGACTACGCCATATGCGCCCTC
TAATTGGTCGCAGCGTTGTGTGGGACCACGTTCTGACCTGCGGACCACGC
ACCCGCGAAAGCGGCGCAGCCCCGGTTGGGCGTCGGTGCGGGTTTTAGGG
TTAGGGTTGGGGTTAGGGTTGGGGTGGGTTGGGTCGGTCACGTGTGTGTC
TTCTGGTTCTGAGTGTGAACCATCTGCAAAACATCGTGTTAGCAGTAAAG
AACTCTTATCAGTGTGTAAGAGCTGGTGTGTAACCCAACCTCCTAATGTG
GGCTAGGTTCCATTTGTGGTTCACCGATTTCTGTTAAAACCCCCGTCGAG
CCACATGTTTGGTGGTGGGGGTCAAACCGCGCGGCGTTGTCATAATAAGC
GTGGTGCGCAGCACATCGCGTCCGTTCGGCGCCGAACATACAAACATTGC
CCGCATGTCTTCGGCGTAAAACATCTGTGCTGTAGAGACTAAGTCTATTG
TAGGACGGAAAATAAAAGAGAGGGGGGGTCGTGTGTGTCTACAGCAGCCC
CCCTGGAAAGACTGTCTCGCAGGCCGCGGACGTGACAGTAGATAATTTAA
CGCAGAGTCCCCGTGTCAGCATCCCCCCCTTTTCGGCGGTTATGGGCTGC
CGGCCTCCTCTAAATCGCTCAACGAGCCCGCATTGCTCTTGTGCACGCTT
GAAAATGTTAACGTATCCCTGCTATGCTGCTTCATTTGTGTGAGCGTGGC
TGCTCTATTGGATCACTAAATCTATGCTGTTCCCGGGCTCTCTCGCCGTG
ATTTTCGCGTAACGACTGCTGTAGGACCTGGGCTGTTGGTTATTCTGTAG
GTTTATGTTCGCTTGCCCGGGTCGGTTTTCTCTGACGCCGACGGGTAAGT
ACCGCCTGTTGCCTGCTTGCTGCCGGTGTTCGGTGTTCAGGACGGAGATG
AAGGCGGTGCCGTGCGGCACTTCGGGAGGAGTCTTGGTTCACTTTCCCAC
CGTCGAGATCGTGCACCGTCTGCATCCCGCCAGCGTGGTGAGGTGAGGCA
GAGAGACAAACCGGAGGGGGACAACGGCAGAGCGACGGCGAGAGCGAGAC
GGTGACAAAACATACAACAATCTAGCGCCAAGTTTCTTCGAGCCTACCAC
GCCACAGACTCTTGCAGAGTTTTTGTACAGACGCCAACGTGGCTGCCTCT
GGGGTGCTAGGTACGGGGATATTGCTGGTTAAACCAACACGGCAGACTGC
GTGTTCTGCAACTGAGCGTGTCTCGCATTGGCGCCCCCTTGTTTCTCATA
CCCGTTCGCACTTTGCGTGCGCTTCTCGCTTCCTCTATTTTCTCGGCAAT
TCTCCATCGCGACCAGCACCGTAAGGGCGTACGAGGACTACGAGCAGGCA
TGGGTCATACCGCGCGTGGTGAGAGAAAGCTTAATTACAGCTACATAGGT
TGGGGGTGGCTGAGCGGCACGTGATATATAGATAGCAAGGGTGGTCAAGA
AACCTGGGATGAATGCGCGGAGGGTGCGCATATGTACGAGCGCTGGCGTT
GTTGCTTTCTGGACGGGGGTGGATGTAGAGCAGTGGCGACAGCAGCGGCC
GGGTCGGGGAAAGGGTGACGGCAGAGACAGAACCCCCCCACATACACACA
CCTGACTCAGACGGGAACAGGGACAACAGGAACATAACAAAGGCAGGCAG
TAAATAGAGTACACTGACGCTTTGTTGGCGGGGAGGGGCAAACAACAGCC
CGGTGGCAAGCAAGCGAGAAGAGCTGCACACCCTCTCGCGTTCCTTTGTG
GCAGCCACGCTAAATCTTAAGTATGCAATACTACGGTGTGCCGATACCCA
TGCCGCGCCAACGCGCAGAGATCTCTGGTTGATTGAAAGTCTATAATTAG
GCTGGAGTGACCCTCCTCCCCGAAAGTACAAAGTACGCCTGCTCAAAGCT
GCTGCTTGCGGACACACGGTGCGGTACAATATTTAGAGCGAGCGACCCAG
CTGTTTGAGGCTACACATCGGCCTTTGATTTTAATGGTTGGGTCCCATCC
GTCCGTGTGCCTCGATGGCACGCCTTATTTTTCTACGTTTTGTTTTTGGT
CTCGGTGTCGGCGTGTTTCGTTGCCTCGCTGCCCTCCCCCGCCCTCGCGC
CGGTCTGCGCAGTGGTTAAAATGTCTTTATTTAACCTTTGTAGCCTCCTT
GGTGGCGAGCAACAGCCTGTGCACCATGGCAGATCTGGTCAGAGCCACTG
CCGTGCGATATATAGCGCGAGCCACGGCCACCTAGCCTTTCGATCGTCGC
GTTCTTGCCTGCGTCTGTCTCTTCCTCTTTGTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTGAGGCGGCGTACTGCTTGCGCAGAAGCACGACGT
ACAGCACGGGTCACGGCGACCTAACCTTTCAGCCGATACCCATCTTACTT
GCGTCTGTCTCTTCCTCGTTGACTCTCTCTCTCTCTCTCTGGCGGCGCAT
TCATTGCTTTCGCAGAAGCACGACGTGAACAAGCTGTGCGCTCAGATGAG
CCTCACGGAGATCTTCACCTCGTCGTTCGACCAGCTTGACGAGATGATCG
TGGCGAATTTGAAGGTTGGTTTTCTGCTGTTGCTGCTGTTGCTGAACAAT
GTGTGTGTGTATGTGTGTGTGTGTTTGTGTGTTTGTACACGTTAGTTTCT
GGCCGTTTGAGTTAAGTGCCCACAGCAGTACGGCCGTTTGGGAGACTCAC
CGGTGGGCGATTATGTAGCCGTAGCCACACCCTTTCCGAGCAATATCACC
GCCGCCAAAATCAAACACTATAAAATTGTACCGACGTGCTGCGACCCGTA
CAGGAATGTGCATACCCGCAGCCGCAAATTGCACAGTTCAGACACGACTC
CGGTATTGCCCATCGCCCACCGCCCGCCGTAGGATTCGGTGTGCCACAAA
GCAAGGCAAAATCCGCCCCCTATCCGGCCCTTCTCCCGCTTTGATTCACG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCG
CCCCCGGGCCGGGGGGGGGTTGTGTAGTCGCCCGGGGGGGGCGGGGCGCG
TCCCCGGGGGNNNNNNNNNNAAAAGGAAAAAACACCCCCCCCCCCCCCCC
CCCCCCCCCCCTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCA
CCGCAGGAGAACGTGTCTGTGTGGGTGCCGGGCTTGATGATTATCGCAGC
GCGGGTGGCGAAGCCTGTCATTCCGCGGCAGCTGCAGGCCGACTTTGTTC
GCGTGGAGGAGGAAATCTCCAAGCTCAAGGTGGGACGTTCTTGACGTGTG
GGTCTCCCCTCCTCCTTATTATAACCAGCATCAGAGTTTCAACTGTAGAT
GCCTCGTTTGCGAGCCACGAGGATGCACCCTGACTATTTTTCGTTGTGCT
GCGCGAAACACGTGTACTCATGCATGCAGCAGCGGTGTGGAGCTGTCGCC
GCTGTAACCCCCAATCGCTTTGGAAGAGTGATTCAGTGCGTGTTTTTTGC
TGTCGTTGCTTCATCATTCCCGCATTGTTTCTGCTTGGTTGACCTGTAAG
TACAGCAGAAGACTCCCTTCTCACTGGCGCCCTCAGAGCCAGAGCTAAAC
CTGCATCTTCACCACGAATGTTTTGCAGTTTCCTGACCATTCCTGCGCGT
CGCTGTCTCTCCACCTCTGCCCTTCTGTGTGCACCATCTGTTTGCCTTCT
GTGACAACGTGCATGACCACGTGCGTGGCCGTTTTGGACGTGGACCGGTA
CGGCACCCCATTTTGTACGGAATTGACACACACGAAAAGGTCGCGCATCA
GCACGAACATCTCGTCATCCGGAACGCCGAAAATGAGAGGTCAAGGCAGG
TGAGCGAAAGCAAATCGATACTGTACACCACCGCGCTTTCATGGGGTTGT
TTCCCAGGCCTCCGGCTGCCTTTGTTCACACGCATGCATACACCGCTCAC
GGTTGCAGAATCGCTTAACTTTGTCGACCGCGCGAGCGCTGGCAGCGACC
AAACCCTGCATATCGGTATGGCCCACGCCGGGCCTAGTCCTTAAATCCTC
GGCTGGGGGTGGAATCTGTTCGCCTATTGCATGATCAGGCGGTTGGCTGG
TCAGGCGTTTTGATGGACCAATTGGTCATCCCACATAAAAAAGTAAATCC
ACATCAACGAACTTCGCCAAAACACACACGCATGCACCCCGCCTTTTTCA
CCGGAGATATTTTGCTTCTGCGTGGCCCCTGAAACCCCTCGTACATACTA
CGGCGTCTCGTTGGTGTGAACGGCGTGCATGTTGCTTGTGCATAAGCTGT
GCGTGCCCACACGCATTGTCCGTGTACGGGCAAGCTGCCCCTCAGACTTT
TGAACGTTGTACCGGCGGCCTACACCAGGGAATACCTGGAGACATGATGT
CTGCGTGTAGATGTTCGGAAATACCGACCACTTTTTCGTGTTTAGTGTCT
TGGAAATTTTGTCTTGTATCCCTTTGCTCTTTCCCCGAAACCCTTGCCCT
TGGTTGCTTTTGTTGTGCTGTTGGTGTTGTAGGTGATGATTGCCGAGAAG
AATCGAGAAATCGGGAGTATGACAATGGCGAGGGAAGTGGAGGAGAAGGA
GGCGGACCTACACATACAGCGAATACAAGGTAAGTATGCAGTCGGCTGGT
CGAAACGGGGCTGAGGGTAACCCTTCGTACGTATACCATGTATTCGCCAT
ACCGATCTTTGACTTTGATCGCCCTCGCCCGGCCACTGTCGACTGAGCGA
TTGACACACTTGGATAGTCCTCCGAGATTATAATTTTAGTGCTCCGTGTC
GCCGTTTGGACCCCTTGCTTGCTGTTTGTTTTTGCGAACGTTGCTGCTGC
TGCTGCTGCTGCTGCGTTCACGACGGCACCAACCAGATGAGATGCACGTC
GCGCGAAGCAAGGATCATTCCGACGCTGCCGGCTACTCCAAACTTCGGGA
AGTGAGTGACTTGCTGGTGGTGCTTGCTTTTTGGCGAGAGCGGTTTCGTG
TTTGTCAGCTATCAGAGCCAGCTCCGTATCACGGAAGGCAGCGCCTCACC
GACGCCGTTGTTGTTGGGCGTCGCAGACCGCGTTTGTGGCGGGGAAAGTA
TTCTCGAATGCGAACGGACCTTCGGACGTTCTGTTCTCCGTGTCCGTGTT
GATGGTGCTCTGCCTCCCGCGGTGTCGCGTAATCTCTTAAGCTCTCTTCC
TCGTTGGTGTTCGTGATACACACGCCGTTCGAGAACGTCCCATCTTCCAT
CATCCCCGCTCCTGTACTGCTGTCGCGCCAGTTGTTTGGCTCGTTGCTGT
TGTTTTCCTCGATAACGGCCGTCTGTATCTATTGCGGATATTGTGTTGTG
GTTTTGTTTCATTTCTTCTCAGTTTGCGTTGCTTGCGTTTTTTAATCTTG
CCGTTGCCGTTGCCGTTGTCTTGCCCTGGCCCCTTTTCGCGGTCGATGCT
CTGGGTTTGGACACCACTTGCGTCGAAGGCGGAGGGTAACGAGCGGAGAC
TCTCCCCTGCGTTCCTTGAGCTGGCAAGGCAAAAAGCTCTCTATCAGAAC
CTCGAGGTGATTGCTCATGTGTTTGGAGTACAGGTTGTGCTTTGTGAGGT
GGGGCATCTGCAGGCGCAAGAGTGTCATCTACCGTGAGACCATCGATTCC
CCTCACCGATAGCGAGGTGTATCACCATGGGCGATGCACCTTTTTGTTTT
TTGGTGACTCATTGAAGGGTAAGCGACACCCCACCTAACCTTCGTGCGAA
GCGGCCTCCGGCAGAATTTACTCCTTTTGTCGTCACAGAAACGGTTGGCT
TAAATTGCTTGCGGCCGAGACTCGCGCTGAAAGCAAGCGACTCGCACCCC
GTATGCTCTTCTTGCTCGTCGGTTGAATTCCCGGGTGCACACGGGGTCGA
TGCGCCTAGCACGAAACACGCTTGAGCGCACGGTGCGATCAAGCTCAACC
GTCATGTCGGCTCTTTCTCTCTCAATGCATTTTGTCGTCGTATCTCAAAC
ACCGGCATCGTTCAGGCCTACTACGGAGACCGCATGCCCGAGTACATCCA
CGACCGACATCAGCAAAATCAGCAGCAACAGCGACAGCATCACAGCGACG
ATGGCATTGGTGTGAACGCCGCGCGAGGAGCGGCAGCTTTCTGGAGGGGG
GCAGACACAATCGACACTGCTCGGACTGCAGCCGCATGATAGTGCAAGGC
CGACTAGAAAAAGTTGTTGTATGTATGTATGTATGTATGTGTGAGGGACT
GCAGTTGGTCTCGAAAACTGATCCTTCGTATTGCGGACACGGCTAAGAAA
TGGTGCCGACAGGCGGCACACTGGGTAAATCGATTCGGAGGAACATCGCT
GAGTCGCGACCTCTCGAGTTTGTCTAATTGGCGAGGATACTGAGGCATTT
GGGGGATGAAGACAGTTTTGGGGACAGAGTGAGGACCAGCACCGCTGAGC
AGAGTCTCGAACCAGTGTCTCCGGGGTTATGATGGATGTCTCTTGTACCG
AAACGGGCGTGTGTGGTGTGTCGTGGAGGGGGCGCAGGGCGAAGGCATAC
TTCGTACTTCGTATGATGCTCAGATGGTTTTGTACAAAGATCTCACTAAT
ATTGCCCCCGAGTATGTTCGATTTTCGTGACAATTGGGACCCAGAACTTC
CGGGAGAGGAAGTAGATGTCTCACCGCCGGTGTCACCATTTTTCCTTTGA
CACTTCAGCATTCTAATCGGAGGGTGGCGTGGTGCGGATGATATCAATTC
GAAGTTTTGGACCCAATGGAGCCCCGTGGGTTCTCTGTATAGTTCCAGAC
GGTCGCGATCTACGAATGAAAATTAGGAATACGAAATCATCTGTACCATA
TTGCTCCTACCCTCACGTTCTAGGGCTACTACTGGGGAGGTCGTGCTAAC
GTTTTTTCACGATGTGTCGAGTTGTTCCTGTTGACAGTATCCAGCTGATA
AAAAAAATGGTTCCCAGCTCCAGACTAGGGGTTGTAGTGTCCTGGGGCTC
ACCACGTTGGGCGATACCGACATTCCAAGCACTCGTTTGCGGCTATTCAG
CTGTCCAGTGTCTGTCAAGCGTGCACATGTATGTAGAGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1254:4002..11740-

>mRNA_L-elsbetiae_contig1254.2056.1 ID=mRNA_L-elsbetiae_contig1254.2056.1|Name=mRNA_L-elsbetiae_contig1254.2056.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1686bp|location=Sequence derived from alignment at L-elsbetiae_contig1254:4002..11740- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGCGGTGCCGTGCGGCACTTCGGGAGGAGTCTTGGTTCACTTTCC
CACCGTCGAGATCGTGCACCGTCTGCATCCCGCCAGCGTGGTGAGATGAA
GGCGGTGCCGTGCGGCACTTCGGGAGGAGTCTTGGTTCACTTTCCCACCG
TCGAGATCGTGCACCGTCTGCATCCCGCCAGCGTGGTGAGCACCGTAAGG
GCGTACGAGGACTACGAGCAGGCATGGGTCATACCGCGCGTGCACCGTAA
GGGCGTACGAGGACTACGAGCAGGCATGGGTCATACCGCGCGTGAAGCAC
GACGTGAACAAGCTGTGCGCTCAGATGAGCCTCACGGAGATCTTCACCTC
GTCGTTCGACCAGCTTGACGAGATGATCGTGGCGAATTTGAAGAAGCACG
ACGTGAACAAGCTGTGCGCTCAGATGAGCCTCACGGAGATCTTCACCTCG
TCGTTCGACCAGCTTGACGAGATGATCGTGGCGAATTTGAAGGAGAACGT
GTCTGTGTGGGTGCCGGGCTTGATGATTATCGCAGCGCGGGTGGCGAAGC
CTGTCATTCCGCGGCAGCTGCAGGCCGACTTTGTTCGCGTGGAGGAGGAA
ATCTCCAAGCTCAAGGAGAACGTGTCTGTGTGGGTGCCGGGCTTGATGAT
TATCGCAGCGCGGGTGGCGAAGCCTGTCATTCCGCGGCAGCTGCAGGCCG
ACTTTGTTCGCGTGGAGGAGGAAATCTCCAAGCTCAAGGTCGCGCATCAG
CACGAACATCTCGTCATCCGGAACGCCGAAAATGAGAGGTCAAGGCAGGT
CGCGCATCAGCACGAACATCTCGTCATCCGGAACGCCGAAAATGAGAGGT
CAAGGCAGGTGATGATTGCCGAGAAGAATCGAGAAATCGGGAGTATGACA
ATGGCGAGGGAAGTGGAGGAGAAGGAGGCGGACCTACACATACAGCGAAT
ACAAGGTGATGATTGCCGAGAAGAATCGAGAAATCGGGAGTATGACAATG
GCGAGGGAAGTGGAGGAGAAGGAGGCGGACCTACACATACAGCGAATACA
AGATGAGATGCACGTCGCGCGAAGCAAGGATCATTCCGACGCTGCCGGCT
ACTCCAAACTTCGGGAAATGAGATGCACGTCGCGCGAAGCAAGGATCATT
CCGACGCTGCCGGCTACTCCAAACTTCGGGAAGCGGAGGGTAACGAGCGG
AGACTCTCCCCTGCGTTCCTTGAGCTGGCAAGGCAAAAAGCTCTCTATCA
GAACCTCGAGGCGGAGGGTAACGAGCGGAGACTCTCCCCTGCGTTCCTTG
AGCTGGCAAGGCAAAAAGCTCTCTATCAGAACCTCGAGGCCTACTACGGA
GACCGCATGCCCGAGTACATCCACGACCGACATCAGCAAAATCAGCAGCA
ACAGCGACAGCATCACAGCGACGATGGCATTGGTGTGAACGCCGCGCGAG
GAGCGGCAGCTTTCTGGAGGGGGGCAGACACAATCGACACTGCTCGGACT
GCAGCCGCATGAGCCTACTACGGAGACCGCATGCCCGAGTACATCCACGA
CCGACATCAGCAAAATCAGCAGCAACAGCGACAGCATCACAGCGACGATG
GCATTGGTGTGAACGCCGCGCGAGGAGCGGCAGCTTTCTGGAGGGGGGCA
GACACAATCGACACTGCTCGGACTGCAGCCGCATGA
back to top