mRNA_L-elsbetiae_contig12534.2052.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 164 bits (416), Expect = 3.100e-41 Identity = 85/140 (60.71%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 1 CLDAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVRISSRVPAVRALRLTWALPLEVLVQSTATELWGWLKVLQLQGSVDSNGLKS-VVWPRNLNQLFLWGD 417 CLDAF++ALSQACEGG KRWY STL+LQL SL+ CRACR+ L V V+D+T RSLW+ R TRPN R+ + ISSRVP VRALRLTWAL +E L++ A ELW W + L+L GS + L S VVWPR L QL L+ D Sbjct: 11 CLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTD 150
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 152 bits (385), Expect = 4.960e-41 Identity = 80/142 (56.34%), Postives = 96/142 (67.61%), Query Frame = 1 Query: 7 DAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVRISSRVPAVRALRLTWALPLEVLVQSTATELWGWLKVLQLQGSVDSNGLKSVVWPRNLNQLFLWGDFNQPI 432 DAF +ALSQACEGG KRWY ST +LQL SL+ CRACRS P L V+V T SLW+P PN ++SKVR+ SRVP VRALRLTWA +E LVQ A ELW + L++ G + + L SVVWP L QL L DF+ P+ Sbjct: 11 DAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPM 152
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.770e-31 Identity = 80/171 (46.78%), Postives = 100/171 (58.48%), Query Frame = 1 Query: 7 DAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVR----------------------------ISSRVPAVRALRLTWALPLEVLVQSTATELWGWLKVLQLQGSVDSNGLKSVVWPRNLNQLFLWGDFNQPIT 435 DA I+A+SQA EG GKRWY STL+L+LASLE CRACR VP + V+V+ T SLW+P TR + R+SK R ISSRVP +AL LTWALP E+L+Q A ELW L+ LQL+ S+ + L SV WP+NL +L L F I+ Sbjct: 11 DALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAIS 181
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 129 bits (323), Expect = 2.370e-29 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 1 CLDAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVRISSRVPAVRALRLTWALPLEVLVQSTATELWGWLKVLQLQGSVDSNGLKSVVWPRNLNQLFL 408 CLDAF+VALSQ EGG KRWY STLQLQLASLEFC ACRS P L V V+ T +LW+ + N S+RVPAV+A+ LTWA P E + S ++ELW L+ LQLQ S+ + L SVVWP+ L +L + Sbjct: 9 CLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSL-------GQANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVM 137
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.100e-29 Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = 1 Query: 1 CLDAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVRISSRVPAVRALRLTWALPLEVLVQSTATELWGWLKVLQLQGSVDSNGLKSVVW 381 CL AFIVAL+Q C G KRWY STL+LQL SLEFC ACR VP L V+V+ +T RSLW+P K+ KR+ + +S+RVPAV+A LTWAL +EVL+Q++A EL K ++ G+ + L S+ W Sbjct: 17 CLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFW 143
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 131 bits (329), Expect = 3.130e-29 Identity = 71/139 (51.08%), Postives = 90/139 (64.75%), Query Frame = 1 Query: 1 CLDAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVRISSRVPAVRALRLTWALPLEVLVQSTATELWGWLKVLQLQGSVDSNGLKSVVWPRNLNQLFLWGD 417 CLDAF+VAL+QAC+G KRWYVSTL+LQL SLE C ACR V L V+V+ +T SLW P + T N R+ KV ISSRVP V+A LTWALP+ VL Q +ATE+ + + L+S VWP+ L ++ D Sbjct: 9 CLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESD 147
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 129 bits (323), Expect = 9.400e-29 Identity = 76/166 (45.78%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 1 CLDAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVRISSRVPAVRALRLTWALPLEVLVQSTATEL--------------------WGWLKVLQLQGSVDSNGLKSVVWPRNLNQLFLWGDFNQPITG 438 CLDAFIVAL QA +G KRWYVSTL+LQL SLEFC ACRS + DV++ +T SLW+PRK+ KR+ + I SRVPAV+A WALP+E+L+ +ATEL GW + L + SV WP L +L FNQPI G Sbjct: 29 CLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPIIG 194
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 114 bits (285), Expect = 1.190e-25 Identity = 65/133 (48.87%), Postives = 86/133 (64.66%), Query Frame = 1 Query: 4 LDAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVRISSRVPAVRALRLTWALPLEVLVQSTATELWGWLKVLQLQGSVDSNGLKSVVWPRNLNQL 402 LD IVAL+QAC+G KRWYVSTL+LQL SLE C ACRS L V V + T +LW+ R + T P++R+ +V S+RVPAV+AL TWALP++ L Q A E + G + ++SVVWP +L +L Sbjct: 90 LDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRL 222
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 100 bits (249), Expect = 3.750e-22 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 1 CLDAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVRISSRVPAV 246 C DAF+VALSQACEGG KR Y STL+L LASL+ CRA RS L V+V+ +T RS W+P K RP++ +SK+R+SSRVP V Sbjct: 22 CFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSKIRLSSRVPVV 103
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE) HSP 1 Score: 105 bits (263), Expect = 2.040e-21 Identity = 60/121 (49.59%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 55 RWYVSTLQLQLASLEFCRACRSVPALDVKVEDRTLRSLWAPRKTSTRPNKRNSKVRI-----SSRVPAVRALRLTWALPLEVLVQSTATELWGWLKVLQLQGSVDSNGLKSVVWPRNLNQL 402 RW+ STL +QLASLEFCRA RS+P + + V+ R RSLW RK+ T + R ++R SRVP +RA RL W L +E L+QSTA ELW LK L L G V S+V P+ L QL Sbjct: 4 RWFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCWKARPLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDVSDASPASMVQPQRLEQL 124 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12534.2052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12534.2052.1 >prot_L-elsbetiae_contig12534.2052.1 ID=prot_L-elsbetiae_contig12534.2052.1|Name=mRNA_L-elsbetiae_contig12534.2052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=440bp CLDAFIVALSQACEGGGKRWYVSTLQLQLASLEFCRACRSVPALDVKVEDback to top mRNA from alignment at L-elsbetiae_contig12534:1297..2616- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12534.2052.1 ID=mRNA_L-elsbetiae_contig12534.2052.1|Name=mRNA_L-elsbetiae_contig12534.2052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1320bp|location=Sequence derived from alignment at L-elsbetiae_contig12534:1297..2616- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12534:1297..2616- >mRNA_L-elsbetiae_contig12534.2052.1 ID=mRNA_L-elsbetiae_contig12534.2052.1|Name=mRNA_L-elsbetiae_contig12534.2052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2640bp|location=Sequence derived from alignment at L-elsbetiae_contig12534:1297..2616- (Laminarionema elsbetiae ELsaHSoW15)back to top |