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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1276 |
| Cds size | 810 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815446.6880343-UTR-L-elsbetiae_contig12533:426..464 | 1622815446.6880343-UTR-L-elsbetiae_contig12533:426..464 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12533 427..464 + |
| 1691682902.2846355-UTR-L-elsbetiae_contig12533:426..464 | 1691682902.2846355-UTR-L-elsbetiae_contig12533:426..464 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12533 427..464 + |
| 1622815446.7240615-UTR-L-elsbetiae_contig12533:2313..2741 | 1622815446.7240615-UTR-L-elsbetiae_contig12533:2313..2741 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12533 2314..2741 + |
| 1691682902.31339-UTR-L-elsbetiae_contig12533:2313..2741 | 1691682902.31339-UTR-L-elsbetiae_contig12533:2313..2741 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig12533 2314..2741 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815446.6982477-CDS-L-elsbetiae_contig12533:464..1270 | 1622815446.6982477-CDS-L-elsbetiae_contig12533:464..1270 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12533 465..1270 + |
| 1691682902.2944236-CDS-L-elsbetiae_contig12533:464..1270 | 1691682902.2944236-CDS-L-elsbetiae_contig12533:464..1270 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12533 465..1270 + |
| 1622815446.7120426-CDS-L-elsbetiae_contig12533:2309..2313 | 1622815446.7120426-CDS-L-elsbetiae_contig12533:2309..2313 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12533 2310..2313 + |
| 1691682902.3038573-CDS-L-elsbetiae_contig12533:2309..2313 | 1691682902.3038573-CDS-L-elsbetiae_contig12533:2309..2313 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig12533 2310..2313 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12533.2051.1 >prot_L-elsbetiae_contig12533.2051.1 ID=prot_L-elsbetiae_contig12533.2051.1|Name=mRNA_L-elsbetiae_contig12533.2051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=270bp
MVDVKHKGCGQQGCTKQPSYGVDGSGKPEFCSAHKKDGMMDVKNKRCSQQ
GCTKHPVYGVGGSGKPEFCSAHKKDGMADMKNKRCGQQGCTKHPSYGVAG
SGKGEFCSAHKKDGMVNRKSKRCGQQGCTKHPSYGVAGSGKREFCSAHKK
DGMAHMNSKRCGQRDCTNCPVYGVGGSGKPEFCSAHNKKDRMVDVVSTKR
CGQYLPPRITGGNKRVCWAPTDLAVAPTPVEAPRDGGTTPSEDDQRLSEP
DGVKVEPGAFRIARRGSWR* back to topmRNA from alignment at L-elsbetiae_contig12533:427..2741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig12533.2051.1 ID=mRNA_L-elsbetiae_contig12533.2051.1|Name=mRNA_L-elsbetiae_contig12533.2051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2315bp|location=Sequence derived from alignment at L-elsbetiae_contig12533:427..2741+ (Laminarionema elsbetiae ELsaHSoW15)
GCAAGCCGGAGTTCTGCTCTGCACACAAGAAGGACGGAATGGTGGACGTA
AAGCACAAGGGGTGCGGCCAACAAGGTTGCACCAAGCAGCCGTCCTATGG
CGTGGATGGTAGCGGCAAGCCGGAGTTCTGCTCTGCACACAAGAAGGACG
GGATGATGGACGTAAAGAACAAGAGGTGCAGCCAACAAGGTTGCACCAAG
CACCCGGTATACGGCGTGGGCGGGAGTGGCAAGCCGGAGTTCTGCTCTGC
ACACAAGAAGGACGGGATGGCGGACATGAAGAACAAGAGGTGCGGCCAAC
AAGGTTGCACCAAGCACCCGTCCTATGGTGTGGCCGGTAGCGGCAAGGGG
GAGTTCTGCTCTGCACACAAGAAGGACGGGATGGTGAACAGGAAGAGCAA
GAGGTGCGGCCAACAAGGTTGCACCAAGCACCCGTCCTATGGTGTGGCCG
GTAGCGGCAAGCGGGAGTTCTGCTCTGCACACAAGAAGGACGGAATGGCG
CACATGAACAGCAAGAGGTGCGGCCAACGAGATTGCACCAATTGCCCGGT
ATACGGCGTTGGCGGGAGCGGCAAGCCGGAGTTCTGCTCTGCACACAACA
AGAAGGACAGGATGGTGGACGTCGTCAGCACGAAGAGATGCGGCCAATAC
CTTCCTCCAAGGATTACGGGGGGCAATAAGAGGGTCTGCTGGGCTCCCAC
CGACTTGGCTGTGGCTCCAACTCCAGTAGAAGCACCGCGAGACGGGGGGA
CAACCCCATCAGAGGACGACCAACGACTTTCGGAGCCAGACGGCGTGAAG
GTGGAACCGGGAGCATTTCGCATCGCAAGGCGAGGAAGCTGGAGGTGGGT
TGAAAGTAGTTGTCACCGCACGCTCCGCTTTTGTTGTTGTCGTGGTCTAT
AACCGTCATCCTCCGTGATCGCCCCGGGGGGCGATCATAATGTTTTAGGA
TTGAAAGATCGCCTCGGGGCGTTCTCAAAGGTAGAGGGGGGGAATCCTTA
TGTGAATTAAAACCCCGGGGCGAACATTCCCCCGGGTGCGTGTGGTCTAC
TTTTAGTCCCGCGTCTACAACACACACGATATCACGGTGTAGCAGACCTT
CACGCGAGCACAGCATGTCGGATATCTCCTAAGTGAGAAGAAGCAGAGGA
CAGGCGATTGGGGGAAGCTTGTTGCGTGCACGGACAGCGCCCCCTCTATC
GATGCCAATGACTGAATACAGCCGTGGATGCGCATGAACGGCCCCCGGGG
CGCCCCAACCCGAAAAACACCCTGGGGCGTTCTCGGAGGTAGGGGGGCGA
ACATAACTTCATTTAAGAAATAAATTCACCCGTTCTCAGGGTTTTGGTGG
CTTATCCCTGATCTTTTTTCGGGGGGCGTTCACGGAGGATATTGCGGTAG
TACGACCATTCATACTGTAATCGCGAGTTATTTTCGAGTTATTTTTCCTC
CACCCCCATTTAATGTTGAATGAGCGTTGAAGGGAAACGTACGTATATTT
AGTAGATATTTTCTTGGCGTGAGCTTCGCTGTTAAAGTGCGGTGTGAAAT
CATGCGGGTATGTTGGAGAGCTCTTCGAAACGAAGGCCCCGCGCTCGACA
AGTATCTATCTCTATGCCTAGCGGGGAACTGCCGCCTGCGCCGAGTTGCA
TCCATCCCCCGCACGATCGAAGCGTGGGGCAGATGTTTGTTTTCTTGCCA
TGCCATGTATGTGCAAGCAGCAGCAGATTTGGTACCGTCTCGTGTTCACA
GCCTTCTCTGTGCAGCTAACGCATATATCCCCCCCCCAATGCTGCTCTTA
CTCTCAGTGATTCGACAGCCACGGGCCTCATTGCGGACTTTTGCAGATCT
CTCACTTTTATGCGATACGTTCCTTTCCACCAGGTAAGGTGCATCGCGAA
GAATTGGAGGGGCTACAGCGGAGGAACGGGAGTGCAAGCTCGGCTAATTA
TTGCTTGCAGGTTGACGGCAGCAGGTGTCTACAACAGTAGTAGACGGGAT
ATTAATTATTTTAAGCCAGGGTGTGGTTGGTGCCAACGTGGACAACCAAA
TGCTCCATTTTGGGGTTCCAAACAAACTGCCTGGTTGTATCGCGTAGTTG
TTGTTTAGTCGTCGTTGATCAGGGCATCAGTTCGGGTTGTATTCGGCGAT
TGCAATGGCGCGAGCGCGATGTGCCGTTGTACCCAGTACCCAGCAAGTTA
AGCAATCGGTATTTCGTTCGCGGCAATGTATGTAGCCTTCATTCGGTTTC
TCGTGCCATCAGGCAAGACACCAGTACAGCAGTGAAGAGTAAACACACAA
CGTGCATGTGAAGGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig12533:427..2741+ >mRNA_L-elsbetiae_contig12533.2051.1 ID=mRNA_L-elsbetiae_contig12533.2051.1|Name=mRNA_L-elsbetiae_contig12533.2051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1620bp|location=Sequence derived from alignment at L-elsbetiae_contig12533:427..2741+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGACGTAAAGCACAAGGGGTGCGGCCAACAAGGTTGCACCAAGCA
GCCGTCCTATGGCGTGGATGGTAGCGGCAAGCCGGAGTTCTGCTCTGCAC
ACAAGAAGGACGGGATGATGGACGTAAAGAACAAGAGGTGCAGCCAACAA
GGTTGCACCAAGCACCCGGTATACGGCGTGGGCGGGAGTGGCAAGCCGGA
GTTCTGCTCTGCACACAAGAAGGACGGGATGGCGGACATGAAGAACAAGA
GGTGCGGCCAACAAGGTTGCACCAAGCACCCGTCCTATGGTGTGGCCGGT
AGCGGCAAGGGGGAGTTCTGCTCTGCACACAAGAAGGACGGGATGGTGAA
CAGGAAGAGCAAGAGGTGCGGCCAACAAGGTTGCACCAAGCACCCGTCCT
ATGGTGTGGCCGGTAGCGGCAAGCGGGAGTTCTGCTCTGCACACAAGAAG
GACGGAATGGCGCACATGAACAGCAAGAGGTGCGGCCAACGAGATTGCAC
CAATTGCCCGGTATACGGCGTTGGCGGGAGCGGCAAGCCGGAGTTCTGCT
CTGCACACAACAAGAAGGACAGGATGGTGGACGTCGTCAGCACGAAGAGA
TGCGGCCAATACCTTCCTCCAAGGATTACGGGGGGCAATAAGAGGGTCTG
CTGGGCTCCCACCGACTTGGCTGTGGCTCCAACTCCAGTAGAAGCACCGC
GAGACGGGGGGACAACCCCATCAGAGGACGACCAACGACTTTCGGAGCCA
GACGGCGTGAAGGTGGAACCGGGAGCATTTCGCATCGCAAGGCGAGGAAG
CTGGAGATGGTGGACGTAAAGCACAAGGGGTGCGGCCAACAAGGTTGCAC
CAAGCAGCCGTCCTATGGCGTGGATGGTAGCGGCAAGCCGGAGTTCTGCT
CTGCACACAAGAAGGACGGGATGATGGACGTAAAGAACAAGAGGTGCAGC
CAACAAGGTTGCACCAAGCACCCGGTATACGGCGTGGGCGGGAGTGGCAA
GCCGGAGTTCTGCTCTGCACACAAGAAGGACGGGATGGCGGACATGAAGA
ACAAGAGGTGCGGCCAACAAGGTTGCACCAAGCACCCGTCCTATGGTGTG
GCCGGTAGCGGCAAGGGGGAGTTCTGCTCTGCACACAAGAAGGACGGGAT
GGTGAACAGGAAGAGCAAGAGGTGCGGCCAACAAGGTTGCACCAAGCACC
CGTCCTATGGTGTGGCCGGTAGCGGCAAGCGGGAGTTCTGCTCTGCACAC
AAGAAGGACGGAATGGCGCACATGAACAGCAAGAGGTGCGGCCAACGAGA
TTGCACCAATTGCCCGGTATACGGCGTTGGCGGGAGCGGCAAGCCGGAGT
TCTGCTCTGCACACAACAAGAAGGACAGGATGGTGGACGTCGTCAGCACG
AAGAGATGCGGCCAATACCTTCCTCCAAGGATTACGGGGGGCAATAAGAG
GGTCTGCTGGGCTCCCACCGACTTGGCTGTGGCTCCAACTCCAGTAGAAG
CACCGCGAGACGGGGGGACAACCCCATCAGAGGACGACCAACGACTTTCG
GAGCCAGACGGCGTGAAGGTGGAACCGGGAGCATTTCGCATCGCAAGGCG
AGGAAGCTGGAGGTAAGTAA back to top
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