mRNA_L-elsbetiae_contig12529.2045.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: A0A6H5KXN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN2_9PHAE) HSP 1 Score: 147 bits (371), Expect = 4.930e-41 Identity = 67/88 (76.14%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 1 TYVGCFKDEKGDRDMLLVK---SDALTPAVCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHGESTLCTERCRGDEDQVCGAHNVNSVY 255 TYVGCF+D+KGDRD+LLV S LTPA CAAYC VEGA Y GVQ+GRKC+CGDSFG+HG+STLC+E C GDEDQVCGAHNVNSVY Sbjct: 177 TYVGCFQDKKGDRDLLLVPKVVSSYLTPAACAAYCSSVEGATYIGVQSGRKCFCGDSFGKHGQSTLCSEPCYGDEDQVCGAHNVNSVY 264
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: D8LG92_ECTSI (F5/8 type C domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG92_ECTSI) HSP 1 Score: 146 bits (369), Expect = 5.070e-39 Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 1 Query: 1 TYVGCFKDEKGDRDMLLVK---SDALTPAVCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHGESTLCTERCRGDEDQVCGAHNVNSVYT 258 TYVGCF+D+K DRD+LLV S LTPA CAAYC VEGA Y GVQ+GRKC+CGDSFG+HG+STLC+E C GDEDQVCGAHNVNSVYT Sbjct: 681 TYVGCFEDKKDDRDLLLVPKVVSSYLTPAACAAYCSSVEGATYIGVQSGRKCFCGDSFGKHGQSTLCSEPCYGDEDQVCGAHNVNSVYT 769
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: A0A267G580_9PLAT (Uncharacterized protein n=5 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267G580_9PLAT) HSP 1 Score: 80.9 bits (198), Expect = 6.560e-16 Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 1 TYVGCFKDEKGDRDML-LVKSDALTPAVCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHGESTLCTERCRGDEDQVCGAHNVNSVYT 258 T VGC+ + + DRD+ LV + ++T +CA C KY +QAG +C+CGDS+G+HG ST C RCRG+ Q+CG + +VYT Sbjct: 914 TEVGCYNNNENDRDLPDLVFTGSVTIQMCAKMCAE-RFYKYAALQAGVQCFCGDSYGKHGASTECNLRCRGNAQQICGGKSSITVYT 999
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: A0A267G318_9PLAT (WSC domain-containing protein (Fragment) n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267G318_9PLAT) HSP 1 Score: 74.3 bits (181), Expect = 5.990e-15 Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 4 YVGCFKDEKGDRDM-LLVKSDALTPA-----VCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHG--ESTLCTERCRGDEDQVCGAHNVNSVY 255 Y+GC++D++G D+ L D L +C C G +YFG+Q G C+CGDS+GR+G + + C + CRG +++CG VNSVY Sbjct: 55 YIGCYQDKEGSPDLERLAGGDGLGTGRVNRKLCDFLCRG-SGNRYFGLQGGGSCFCGDSYGRYGSVDESSCDQNCRGYAEEICGGEGVNSVY 145
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: K1Q6F9_CRAGI (Protein xylosyltransferase n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1Q6F9_CRAGI) HSP 1 Score: 75.1 bits (183), Expect = 6.920e-14 Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 4 YVGCFKDEKGDRDMLLVKSDALT--PAVCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHGES-TLCTERCRGDEDQVCGAHNVNSVYT 258 Y GC+ D+ DRDM K+ C YCL + G +Y G+Q GR+C+CG+SFG+HG + C +RC G+ + CG + N VY+ Sbjct: 126 YYGCYLDDAEDRDMTHQKTLPTENWSQTCIDYCLQI-GFRYAGLQYGRECWCGNSFGKHGTTGAACNQRCPGNSKEFCGGYLTNDVYS 212
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: T1FZB5_HELRO (WSC domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FZB5_HELRO) HSP 1 Score: 69.7 bits (169), Expect = 1.380e-13 Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 4 YVGCFKD--EKGDRDMLLVKSD--ALTPAVCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHGES--TLCTERCRGDEDQVCGAHNVNSVYT 258 Y+GC+ D D+D+ L ++ A+T C YCL + Y G+QAGR CYCG+S+G+HG++ + C +C G + CG NS+Y+ Sbjct: 13 YLGCYNDVDAASDKDLNLANTNQPAMTIESCITYCLQNDYL-YAGLQAGRNCYCGNSYGKHGKALDSDCNSKCAGSITETCGGTLKNSIYS 102
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: UPI00148A1B09 (xylosyltransferase sqv-6-like isoform X1 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A1B09) HSP 1 Score: 71.2 bits (173), Expect = 3.010e-13 Identity = 35/89 (39.33%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 4 YVGCFKDEKGDRDML---LVKSDALTPAVCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHGES-TLCTERCRGDEDQVCGAHNVNSVYT 258 Y GC+ D + DRD+ ++++ + A C YCL + G +Y G+Q GR+C+CG+SFG+HG + +C +RC G+ ++ CG + N VY+ Sbjct: 110 YYGCYLDAE-DRDLTHRKTLRTENWSQA-CIDYCLQI-GFRYAGLQYGRECWCGNSFGKHGTTGAVCNQRCPGNSNEFCGGYFTNDVYS 195
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: A0A1I8GNZ8_9PLAT (WSC domain-containing protein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GNZ8_9PLAT) HSP 1 Score: 69.3 bits (168), Expect = 1.740e-12 Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 40 DMLLVKSDALTPAVCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHGE--STLCTERCRGDEDQVCGAHNVNSVY 255 D L+ S +T VC+ +C + G YFGVQ G++C+CG S+G HG+ + C +C+G+ +Q+CG +NSV+ Sbjct: 59 DGALMYSPDMTLGVCSNFC-SLFGFPYFGVQVGKQCFCGSSYGLHGQLSDSKCNSQCKGNPEQICGGFTINSVF 131
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: A0A1I8I836_9PLAT (WSC domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8I836_9PLAT) HSP 1 Score: 67.4 bits (163), Expect = 2.990e-12 Identity = 28/68 (41.18%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 58 SDALTPAVCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHGE--STLCTERCRGDEDQVCGAHNVNSVY 255 S +T VC+ +C + G YFGVQ G++C+CG S+G HG+ + C +C+G+ +Q+CG +NSV+ Sbjct: 3 SPDMTLGVCSNFC-SLFGFPYFGVQVGKQCFCGSSYGLHGQLSDSKCNSQCKGNPEQICGGFTINSVF 69
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Match: A0A267FWA7_9PLAT (WSC domain-containing protein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FWA7_9PLAT) HSP 1 Score: 67.0 bits (162), Expect = 3.880e-12 Identity = 35/85 (41.18%), Postives = 47/85 (55.29%), Query Frame = 1 Query: 10 GCFKDEKGDRDMLLVKS--DALTPAVCAAYCLPVEGAKYFGVQAGRKCYCGDSFGRHGEST-LCTERCRGDEDQVCGAHNVNSVY 255 GCF D RD+ + + +CA C + KY G+Q G C+CG+SFG HGES C RC G++D++CG NSVY Sbjct: 59 GCFIDNSDMRDLPTFAGYDEKMDVGLCAQRCQKWK-KKYLGLQEGSSCWCGNSFGAHGESADSCQTRCLGNDDEMCGGKLFNSVY 142 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12529.2045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12529.2045.1 >prot_L-elsbetiae_contig12529.2045.1 ID=prot_L-elsbetiae_contig12529.2045.1|Name=mRNA_L-elsbetiae_contig12529.2045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp TYVGCFKDEKGDRDMLLVKSDALTPAVCAAYCLPVEGAKYFGVQAGRKCYback to top mRNA from alignment at L-elsbetiae_contig12529:4460..5490+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12529.2045.1 ID=mRNA_L-elsbetiae_contig12529.2045.1|Name=mRNA_L-elsbetiae_contig12529.2045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1031bp|location=Sequence derived from alignment at L-elsbetiae_contig12529:4460..5490+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12529:4460..5490+ >mRNA_L-elsbetiae_contig12529.2045.1 ID=mRNA_L-elsbetiae_contig12529.2045.1|Name=mRNA_L-elsbetiae_contig12529.2045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=516bp|location=Sequence derived from alignment at L-elsbetiae_contig12529:4460..5490+ (Laminarionema elsbetiae ELsaHSoW15)back to top |