mRNA_L-elsbetiae_contig12499.2028.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12499.2028.1
Unique NamemRNA_L-elsbetiae_contig12499.2028.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: D7G123_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G123_ECTSI)

HSP 1 Score: 545 bits (1404), Expect = 1.330e-190
Identity = 308/425 (72.47%), Postives = 331/425 (77.88%), Query Frame = 1
Query:   22 ALRQALTSGVCHGSGR----RCLARTL--SSSRRAPGDAAAAASVAA--VVAPADAPPRPAARTTVEGPGLQDFIAKVSDRNVKGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDPATAAAIRSHNARS--GGDSGAEVETAGSFFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERGGVDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVREITLLGQNVNSYHDRSEASAALYGGTDYSTSAGFGNTFRSRGGAGAYFAELLVEV 1266
            A R+AL  G  +GS      R LAR L  SSSRR PGD+AAA +  A    AP      P   T    PGL+DF++ V   + + S                                     +VDPATAAA+ SH+AR+  GGD G    TAGSFFIETYGCQMNVSD+EVVRAILL+AGF EA++LE+AGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERGGVDLVTGPDAYRDLPRLL LVGT+G GES GAVNVQLSQDETYADIAPVRLVNNTSEAVSAF+SIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVRE+TLLGQNVNSYHDRSEAS ALY GTDY+T+AGFGNTFRSRGGAGAYFAELL EV
Sbjct:    8 AFRRALACGSTYGSNSGSSSRPLARALLSSSSRRTPGDSAAALAADADGTSAPLTPGAPPTRATASASPGLRDFLSNVHVDSSRTSGPDNNSTSSSNSEMSSPASWNSDD-------------DVDPATAAALESHSARTADGGDCGLVERTAGSFFIETYGCQMNVSDTEVVRAILLKAGFSEADTLEEAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERGGVDLVTGPDAYRDLPRLLELVGTSGSGESTGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFISIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVREVTLLGQNVNSYHDRSEASTALYNGTDYTTTAGFGNTFRSRGGAGAYFAELLAEV 419          
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: A0A6H5L4E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E8_9PHAE)

HSP 1 Score: 518 bits (1335), Expect = 4.140e-170
Identity = 313/457 (68.49%), Postives = 334/457 (73.09%), Query Frame = 1
Query:   58 GSGRRCLARTL--SSSRRAPGDAAAAASVAAVVAPADAPP-RPAARTTVE-GPGLQDFIAKVSDRNVKGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDPATAAAIRSHNARS--GGDSGAEVETAGSFFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLK--------------ESLLERGGVDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDE----------------------------------AMRLRDDGVREITLLGQNVNSYHDRSEASAALYGGTDYSTSAGFGNTFRSRGGAGAYFAELLVEV 1266
            GS  R LAR L  SSSRRAPGD+AAA +  A    A+  P  P  R TV   PGL+DFI+ V   + + S     XXXXXX                          +VDPATA A+ SH+AR+  GGD G E  TAGSFFIETYGCQMNVSD+EVVRAILL+AGF EA++LE+AGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLK              ESLLERGGVDLVTGPDAYRDLPRLL LVGT+G GES GAVNVQLSQDETYADIAPVRLVNNTSEAVSAF+SIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDE                                  AMRLRDDGVRE+TLLGQNVNSYHDRSEAS ALY GTDY+T+AGFGNTFRSRGGAGAYFAELL EV
Sbjct:  738 GSSSRPLARALLSSSSRRAPGDSAAALAADADGTSANPTPGAPPTRVTVSTSPGLRDFISNVHVDSSRTSRPNNSXXXXXXEMSSPASWNSDD--------------DVDPATAVALESHSARTADGGDCGLEERTAGSFFIETYGCQMNVSDTEVVRAILLKAGFSEADTLEEAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKLRSTVCFISHYPLKESLLERGGVDLVTGPDAYRDLPRLLELVGTSGSGESTGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFISIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDETYLCKDSRSFPRPTHPLLPLFHGLDRSPSSPSSKAMRLRDDGVREVTLLGQNVNSYHDRSEASTALYKGTDYTTTAGFGNTFRSRGGAGAYFAELLAEV 1180          
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: A0A836CJ12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ12_9STRA)

HSP 1 Score: 327 bits (837), Expect = 1.950e-103
Identity = 178/281 (63.35%), Postives = 208/281 (74.02%), Query Frame = 1
Query:  424 DSGAEVETAGSFFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERGGVDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVREITLLGQNVNSYHDRSEASAALYGGTDYSTSAGFGNTFRSRGGAGAYFAELLVEV 1266
            ++ A+     +FF+ETYGCQMN+SD+E+VR++LL+AG+ EA  LE A VVLANTCAIRE AE KVW+RLKF +S++++R         A  P    LSDLK+GVLGCMAERLK SLLE G VDLV GPDAYRDLPRLLGLV   G      AVNVQLSQ+ETYAD+ P R        V AFVS+MRGCNNMC+YCIVPFTRGRERSRPL +IVDE  RL D+GVRE+TLLGQNVNSYHD     AA  G   Y+T+AGF N +R RGG GAYFA+LL  V
Sbjct:   11 EAAAQAAALKTFFVETYGCQMNLSDTEIVRSVLLKAGYTEAADLETAAVVLANTCAIRENAETKVWERLKFLASVQQQR--------HAELPPSPPLSDLKVGVLGCMAERLKTSLLEGGLVDLVAGPDAYRDLPRLLGLVNGGG---DEPAVNVQLSQEETYADLRPAR----RGAGVDAFVSVMRGCNNMCSYCIVPFTRGRERSRPLATIVDEVRRLSDEGVREVTLLGQNVNSYHD-----AASRGRAAYATAAGFTNLYRLRGGDGAYFADLLHAV 271          
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: A0A7S4FW59_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FW59_9EUGL)

HSP 1 Score: 290 bits (743), Expect = 2.960e-89
Identity = 158/270 (58.52%), Postives = 188/270 (69.63%), Query Frame = 1
Query:  457 FFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERGGVDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVREITLLGQNVNSYHDRSEASAALYGGTDYSTSAGFGNTFRSRGGAGAYFAELLVEV 1266
            F IETYGCQMN SDSE+VR+IL  AG     S+E+A V+L NTCAIRE AE K+W+RL +F SIR++R+LA       R PV        +G+LGCMAERL++ LLE   V+ + GPDAYRD+PRL   V T+  G    A N QLS +ETYADI PVR     +  V AFVSIMRGCNNMC+YCIVPFTRGRERSRP+ SIV E   L   GV+E+ LLGQNVNSYHD+S  S   Y  T Y ++AGF N FR+R GAGA FA+LL EV
Sbjct:   58 FHIETYGCQMNTSDSEIVRSILCGAGHTPCSSVEEADVILTNTCAIRENAENKIWNRLAYFQSIRKKRQLAND----VRAPV--------VGILGCMAERLRDKLLEEQSVNFICGPDAYRDIPRL---VSTSVSGSDQKAANTQLSLEETYADIQPVR----EASRVEAFVSIMRGCNNMCSYCIVPFTRGRERSRPIPSIVQEIQGLAAQGVKEVLLLGQNVNSYHDKSLDSQKAYSTTSYRSTAGFSNLFRARDGAGARFADLLREV 308          
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: A0A5A8DM42_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DM42_CAFRO)

HSP 1 Score: 280 bits (716), Expect = 3.640e-85
Identity = 157/279 (56.27%), Postives = 196/279 (70.25%), Query Frame = 1
Query:  454 SFFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERG-GVDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRL-RDDGVREITLLGQNVNSYHDRSEASAALYGG------TDYSTSAGFGNTFRSRGGAGAYFAELLVEV 1266
            S+FIETYGCQMNVSDSE+V AIL  AGF  A  LE+A V+L+NTCA+R+ AE +V  R+ ++  ++ + KL        R+PV        +GVLGCMAER+K  LLE    VD+V GPD+YRDLP L+GL+     G S  AV+VQLS +ETYAD+APVRL   + +   AFVSIMRGCNNMC++CIVPFTRGRERSR + S+VDE  RL  + GV+E+ LLGQNVNSYHD+S +SA    G      + Y T+ GFGNTF++RGG G  FAELL EV
Sbjct:   20 SYFIETYGCQMNVSDSEIVAAILEGAGFTRAPKLEEADVILSNTCAVRDNAEQRVLSRINYYGHVKGKSKLG-------RRPV--------VGVLGCMAERMKTQLLEENQAVDIVVGPDSYRDLPALVGLIRG---GHSPAAVSVQLSAEETYADVAPVRL---SKDRPDAFVSIMRGCNNMCSFCIVPFTRGRERSRAVSSVVDECRRLVEEQGVKEVVLLGQNVNSYHDKSSSSALTGIGDGAVLSSSYETAPGFGNTFKARGGDGVRFAELLHEV 277          
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: H3G704_PHYRM (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3G704_PHYRM)

HSP 1 Score: 276 bits (706), Expect = 2.140e-84
Identity = 158/272 (58.09%), Postives = 185/272 (68.01%), Query Frame = 1
Query:  454 SFFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERGG-VDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVREITLLGQNVNSYHDRSEASAALYGGTDYSTSAGFGNTFRSRGGAGAYFAELLVEV 1266
            SFFIETYGCQMN +DSE+VRAILLE G+  A + + A VVL NTCA+R+ AE K+W+RL+    ++      A    + ++ VP       +GVLGCMAERLK  LLE    VD+V GPDAYRD+P LL +V     G    AVNVQLS DETYADIAPVR       + SAFVSIMRGCNNMC+YCIVPFTRGRERSR + SIVDE   L D GV+E+ LLGQNVNSYHD+    AA   G  Y +SAGF N FRSR   G  FA+LL EV
Sbjct:    8 SFFIETYGCQMNSADSEIVRAILLEGGYAPAAAADAADVVLINTCAVRDNAEAKIWNRLEQLRQVK------AKLLRRKQKTVP------TVGVLGCMAERLKTKLLESDKMVDVVVGPDAYRDIPNLLRVV----HGSGEAAVNVQLSLDETYADIAPVRA---DPHSPSAFVSIMRGCNNMCSYCIVPFTRGRERSRVISSIVDEVRALSDQGVKEVVLLGQNVNSYHDKKSEGAAE-NGRGYVSSAGFSNMFRSRDAPGFRFADLLDEV 259          
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: A0A482SXQ1_9ARCH (Probable threonylcarbamoyladenosine tRNA methylthiotransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXQ1_9ARCH)

HSP 1 Score: 277 bits (708), Expect = 2.290e-83
Identity = 158/272 (58.09%), Postives = 187/272 (68.75%), Query Frame = 1
Query:  457 FFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERGGVDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVREITLLGQNVNSYHDRSEASAALYGGTDYSTSAGFGNTFRS--RGGAGAYFAELLVEV 1266
            F IETYGCQMNVSDSE+V ++L++AG      L++A ++L NTCAIRE AE KVW RLKFF SIR +RK A      AR P+        +GVLGCMAERLKE LL    VD V GPDAYRD+PRLL  V + G+ ++    N  LS +ETYADI+PVR V+    A SAFVSIMRGCNNMC++CIVPFTRGRERSRP+ SI+ E   L D GV+E+ LLGQNVN YHD SE SA  +  T Y  + GF N FRS  R   GA FA+LL  V
Sbjct:  103 FHIETYGCQMNVSDSEIVTSLLVKAGHTPCPELDEADLILTNTCAIRENAEAKVWHRLKFFQSIRNKRKKAKQ---VARYPI--------VGVLGCMAERLKERLLTEESVDFVCGPDAYRDIPRLLENVISVGQKQA----NTLLSFEETYADISPVREVS----AHSAFVSIMRGCNNMCSFCIVPFTRGRERSRPISSILKEIQELSDKGVKEVVLLGQNVNGYHDTSEESAQRFPSTPYKIAPGFNNLFRSKKRDLPGARFADLLRAV 355          
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: A0A421FKQ6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FKQ6_9STRA)

HSP 1 Score: 276 bits (706), Expect = 4.020e-83
Identity = 159/272 (58.46%), Postives = 183/272 (67.28%), Query Frame = 1
Query:  454 SFFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERGG-VDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVREITLLGQNVNSYHDRSEASAALYGGTDYSTSAGFGNTFRSRGGAGAYFAELLVEV 1266
            SFFIETYGCQMN +DSE+VRAILLE G+  A   + A VVL NTCA+R+ AE K+W RL+    ++      A    + ++ VP       +GVLGCMAERLK  LLE    VDLV GPDAYRD+P LL +V     G    AVNVQLS DETYADIAPVR       + SAFVSIMRGCNNMC+YCIVPFTRGRERSR + SIVDE   L D GV+E+ LLGQNVNSYHD+    AA  G   Y +SAGF N FRSR   G  FA+LL EV
Sbjct:   89 SFFIETYGCQMNSADSEIVRAILLEGGYAPASRADAADVVLINTCAVRDNAEAKIWHRLEALRQVK------AKLLRRKQKTVP------TVGVLGCMAERLKVKLLESNKMVDLVVGPDAYRDIPNLLRVV----HGSGEAAVNVQLSLDETYADIAPVRA---DPHSPSAFVSIMRGCNNMCSYCIVPFTRGRERSRVMNSIVDEVRALSDQGVKEVVLLGQNVNSYHDKKSEGAAEKG-RGYVSSAGFNNMFRSRDALGFRFADLLDEV 340          
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: A0A812I016_9DINO (Aminoacyl-tRNA hydrolase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812I016_9DINO)

HSP 1 Score: 280 bits (716), Expect = 1.210e-82
Identity = 157/279 (56.27%), Postives = 196/279 (70.25%), Query Frame = 1
Query:  454 SFFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERG-GVDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRL-RDDGVREITLLGQNVNSYHDRSEASAALYGG------TDYSTSAGFGNTFRSRGGAGAYFAELLVEV 1266
            S+FIETYGCQMNVSDSE+V AIL  AGF  A  LE+A V+L+NTCA+R+ AE +V  R+ ++  ++ + KL        R+PV        +GVLGCMAER+K  LLE    VD+V GPD+YRDLP L+GL+     G S  AV+VQLS +ETYAD+APVRL   + +   AFVSIMRGCNNMC++CIVPFTRGRERSR + S+VDE  RL  + GV+E+ LLGQNVNSYHD+S +SA    G      + Y T+ GFGNTF++RGG G  FAELL EV
Sbjct:   20 SYFIETYGCQMNVSDSEIVAAILEGAGFTRAPKLEEADVILSNTCAVRDNAEQRVLSRINYYGHVKGKSKLG-------RRPV--------VGVLGCMAERMKTQLLEENQAVDIVVGPDSYRDLPALVGLIRG---GHSPAAVSVQLSAEETYADVAPVRL---SKDRPDAFVSIMRGCNNMCSFCIVPFTRGRERSRAVSSVVDECRRLVEEQGVKEVVLLGQNVNSYHDKSSSSALTGIGDGAVLSSSYETAPGFGNTFKARGGDGVRFAELLHEV 277          
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Match: A0A6A3LAN2_9STRA (CDK5 regulatory subunit-associated protein 1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LAN2_9STRA)

HSP 1 Score: 274 bits (701), Expect = 2.650e-82
Identity = 159/273 (58.24%), Postives = 187/273 (68.50%), Query Frame = 1
Query:  454 SFFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRERAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLK-IGVLGCMAERLKESLLERGG-VDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVREITLLGQNVNSYHDRSEASAALYGGTDYSTSAGFGNTFRSRGGAGAYFAELLVEV 1266
            SFFIETYGCQMN +DSE+VRAILLE G+  A + + A V+L NTCA+R+ AE K+W+RL+    ++         A   RQ       D++ +GVLGCMAERLK+ LLE    VDLV GPDAYRD+P LL +V     G    AVNVQLS DETYADIAPVR       + SAFVSIMRGCNNMC+YCIVPFTRGRERSR + SIVDE   L D+GV+E+ LLGQNVNSYHD+    AA  G   Y +SAGF N FRSR   G  FA+LL EV
Sbjct:   97 SFFIETYGCQMNSADSEIVRAILLEGGYAPAAAADAADVLLINTCAVRDNAEAKIWNRLESLRQVK---------AKLLRQKH----KDVQTVGVLGCMAERLKKKLLEADKMVDLVVGPDAYRDIPNLLRVV----HGSGEAAVNVQLSLDETYADIAPVRA---DPHSPSAFVSIMRGCNNMCSYCIVPFTRGRERSRVMSSIVDEVRALSDEGVKEVVLLGQNVNSYHDKKSEGAAEKG-RGYVSSAGFSNMFRSRDAPGFRFADLLDEV 348          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12499.2028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G123_ECTSI1.330e-19072.47N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5L4E8_9PHAE4.140e-17068.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJ12_9STRA1.950e-10363.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4FW59_9EUGL2.960e-8958.52Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A5A8DM42_CAFRO3.640e-8556.27Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
H3G704_PHYRM2.140e-8458.09Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
A0A482SXQ1_9ARCH2.290e-8358.09Probable threonylcarbamoyladenosine tRNA methylthi... [more]
A0A421FKQ6_9STRA4.020e-8358.46Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A812I016_9DINO1.210e-8256.27Aminoacyl-tRNA hydrolase n=1 Tax=Symbiodinium sp. ... [more]
A0A6A3LAN2_9STRA2.650e-8258.24CDK5 regulatory subunit-associated protein 1 n=3 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12499contigL-elsbetiae_contig12499:1362..4667 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score549.3
Seed ortholog evalue1.6e-153
Seed eggNOG ortholog2880.D7G123
Preferred nameCDK5RAP1
Hectar predicted targeting categoryother localisation
GOsGO:0000079,GO:0000373,GO:0000375,GO:0000377,GO:0000959,GO:0000963,GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006417,GO:0006450,GO:0006469,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008033,GO:0008150,GO:0008152,GO:0008283,GO:0008380,GO:0009451,GO:0009507,GO:0009536,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010563,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0016070,GO:0016740,GO:0016782,GO:0019207,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0022008,GO:0030154,GO:0030234,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0033673,GO:0034248,GO:0034250,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0042325,GO:0042326,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043549,GO:0044092,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045595,GO:0045664,GO:0045727,GO:0045736,GO:0045786,GO:0045859,GO:0045903,GO:0045936,GO:0046483,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050497,GO:0050767,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0051248,GO:0051338,GO:0051348,GO:0051726,GO:0051960,GO:0060255,GO:0060284,GO:0060322,GO:0065007,GO:0065008,GO:0065009,GO:0070129,GO:0070131,GO:0070525,GO:0070900,GO:0071704,GO:0071900,GO:0071901,GO:0080090,GO:0090304,GO:0090646,GO:0098772,GO:0140053,GO:1900864,GO:1901360,GO:1904029,GO:1904030,GO:2000026,GO:2000112
EggNOG free text desc.N6-isopentenyladenosine methylthiotransferase activity
EggNOG OGsCOG0621@1,KOG2492@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionRadical SAM
Ec32 orthologEc-19_002210.1
Exons5
Model size1296
Cds size1296
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12499.2028.1prot_L-elsbetiae_contig12499.2028.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12499 1362..4667 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815443.9355576-CDS-L-elsbetiae_contig12499:1361..20111622815443.9355576-CDS-L-elsbetiae_contig12499:1361..2011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 1362..2011 +
1691682900.6599255-CDS-L-elsbetiae_contig12499:1361..20111691682900.6599255-CDS-L-elsbetiae_contig12499:1361..2011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 1362..2011 +
1622815443.9458883-CDS-L-elsbetiae_contig12499:2478..25901622815443.9458883-CDS-L-elsbetiae_contig12499:2478..2590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 2479..2590 +
1691682900.6725695-CDS-L-elsbetiae_contig12499:2478..25901691682900.6725695-CDS-L-elsbetiae_contig12499:2478..2590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 2479..2590 +
1622815443.9570432-CDS-L-elsbetiae_contig12499:3106..32351622815443.9570432-CDS-L-elsbetiae_contig12499:3106..3235Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 3107..3235 +
1691682900.6844351-CDS-L-elsbetiae_contig12499:3106..32351691682900.6844351-CDS-L-elsbetiae_contig12499:3106..3235Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 3107..3235 +
1622815443.9693782-CDS-L-elsbetiae_contig12499:3637..38171622815443.9693782-CDS-L-elsbetiae_contig12499:3637..3817Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 3638..3817 +
1691682900.6956792-CDS-L-elsbetiae_contig12499:3637..38171691682900.6956792-CDS-L-elsbetiae_contig12499:3637..3817Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 3638..3817 +
1622815443.9788241-CDS-L-elsbetiae_contig12499:4442..46671622815443.9788241-CDS-L-elsbetiae_contig12499:4442..4667Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 4443..4667 +
1691682900.7113385-CDS-L-elsbetiae_contig12499:4442..46671691682900.7113385-CDS-L-elsbetiae_contig12499:4442..4667Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12499 4443..4667 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12499.2028.1

>prot_L-elsbetiae_contig12499.2028.1 ID=prot_L-elsbetiae_contig12499.2028.1|Name=mRNA_L-elsbetiae_contig12499.2028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=432bp
MNAYPYKALRQALTSGVCHGSGRRCLARTLSSSRRAPGDAAAAASVAAVV
APADAPPRPAARTTVEGPGLQDFIAKVSDRNVKGSSSSSSSSSSSSSSSS
SSTSGMSSPAAWNNDDNDSSDDNVDPATAAAIRSHNARSGGDSGAEVETA
GSFFIETYGCQMNVSDSEVVRAILLEAGFREAESLEDAGVVLANTCAIRE
RAEGKVWDRLKFFSSIRRRRKLAATHAAKARQPVPGGLSDLKIGVLGCMA
ERLKESLLERGGVDLVTGPDAYRDLPRLLGLVGTAGRGESAGAVNVQLSQ
DETYADIAPVRLVNNTSEAVSAFVSIMRGCNNMCTYCIVPFTRGRERSRP
LGSIVDEAMRLRDDGVREITLLGQNVNSYHDRSEASAALYGGTDYSTSAG
FGNTFRSRGGAGAYFAELLVEVCMGTMYFFR*
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mRNA from alignment at L-elsbetiae_contig12499:1362..4667+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12499.2028.1 ID=mRNA_L-elsbetiae_contig12499.2028.1|Name=mRNA_L-elsbetiae_contig12499.2028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3306bp|location=Sequence derived from alignment at L-elsbetiae_contig12499:1362..4667+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAATGCCTACCCATACAAAGCACTTCGACAAGCTCTGACCAGCGGCGT GTGTCATGGAAGTGGCAGGAGGTGTCTTGCCAGAACACTCTCTTCATCAC GAAGAGCACCAGGCGACGCAGCAGCAGCAGCATCCGTAGCAGCAGTGGTC GCACCTGCCGATGCGCCACCAAGACCAGCGGCAAGGACAACCGTGGAGGG TCCGGGACTCCAAGACTTTATCGCCAAAGTCAGCGACCGCAATGTAAAAG GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCACAAGCGGAATGAGCTCGCCTGCTGCTTGGAACAACGACGACAA CGACAGCAGTGACGACAACGTTGACCCAGCAACAGCAGCGGCAATCAGGA GCCACAACGCCCGAAGCGGCGGCGACTCGGGGGCAGAAGTAGAAACGGCA GGCTCATTCTTCATCGAGACGTACGGCTGCCAGATGAACGTGAGCGACAG CGAGGTGGTGCGAGCCATCCTGCTCGAGGCGGGCTTCCGGGAAGCGGAGA GCCTGGAAGACGCCGGCGTTGTTTTGGCCAACACTTGCGCGATTAGAGAG CGGGCGGAGGGGAAGGTGTGGGACCGCCTCAAATTTTTCTCGTCAATTCG GTGAGTGTGTGTGTGTATCTATGTGTCGATGTGTCGATGTACACTGGGCA GATGGTGCTGGGTCGAGACCCGTCCATGCTTCTGGTCGGGTGCCCCAAAG GGCGGTCGGTACACACGTAGACTATGTTCGTGGGTCGTGCGTGCTCCGCT ACGCCCCTCTCAGGCCAGGGGAGAGGAGAGAGACGAACGCTCCGGCCAGA CGGCATGCTTCAGTCGGGTGCCCCAAAAGGCGGTACACGTGTAGACTAGA TTATATACGTGGGTCGTGCGTGCTCCGCTACGCCCCTGTCAGGCCAGGGG AGAGGAGAGAGACTAACGCCCCCGCAGACGGCGATGTACAGAAGCCTCGT TCTCGGCGCCTGCTCCTAAACTCAACGGAGCAGCGCTCCTGGCGCTGCAG ATGCCTCTGATGTGTCCTGAGAGCACGGCTGCCCGGCAACCCGTTCTCGC GCGCTGTCCTCGCGCAGGCGGCGGCGGAAGCTGGCGGCGACCCACGCGGC CAAAGCTCGGCAACCCGTGCCCGGAGGGCTGAGCGATCTAAAGATAGGCG TCCTCGGCTGCATGGCGGAACGTCTGAAGGTGCAGACGGGCTCATGGCCC ACAGTTGTCCCCGCTTGTCTATCTGTGCGTGGTGTACTTTGGTCTACTAT CAGCGCTTGGTATATAAGGTATATACAGGCAGGCACCGCAGGAGGGGGTC CACCCCCCCCCCCCCCCCCCCCTCCTGTGTGACCCCGGTTGGGTCGTCTA GCTGGTCGTAGTGGAGGAAGGAGGCCAGTGGGGCAGACGAAGAATAAGCC AATAACGGGAGGGAAAAAACTAAATTTACACGAAGTATTACTTGGTTATA TAAAGAACATACATACTGCTTGTACATATGCTACAAAATATAGGTATCTT CTTTTGCGAGCCTAGTCCACAAAGGCGAGAACCCCGATCGGGATCGGCCC GGCCCGCCCCGCCCCTCAAAGCTCTAGATATATAGAGGGATGCATACTGT AGCTATTTAGCCTATTACGGCCTGCACGACTGCGGCCTGCGCGATCAGCT GAGTCGCTTCGATCCCTTCTACTTTTCTCGTGCACCGACTGACAGGAGAG CCTTCTTGAGCGCGGAGGGGTGGACCTTGTTACCGGGCCCGACGCCTACC GAGATCTCCCTCGACTGCTGGGGTTGGTCGGGACGGCCGGGAGGGGGGAG AGCGCGGGGGCCGTCAATGTCCAGGTGGGAGTCATGCATGGCCCAGTTGT TCCAAATACCGTTCATTTTTGTCTGTCTCGGTTTTTGACCCTTGATCTGT TTTGGTTTGGCGGCTCCGATGCCTTGCGTTGGCGCCGGCGGCTAAGGCGA TGGGTAGATCGTTTGGGTCTCAACTCGCCCCGCACTCTGTTGCCGCTGCT TTCCCGCGCGGCTCTTTGTGCTTGTAGCTTTCTCGTTCGCTCGACGCTGT GGTCAGCCCAATTTGTTTGGATTATAGTGGACGAAAATAGCTAACGTTTA CCCCCCCCCCCCCCCCCGACAAATTTCCCTTGTGCGCACCCCCCGTGCCC ATTATTTCCCGCCCGCGCTTCCTATCTCCCAACTTTGTCCGGCTTTGGCT CCTCGGGGTGGGGGCGGGCGGTACAGCTCTCGCAGGACGAGACGTACGCC GACATCGCCCCGGTCCGGCTGGTCAACAACACCTCGGAGGCCGTGTCGGC GTTCGTCAGCATCATGCGGGGCTGCAACAACATGTGCACCTACTGCATCG TGCCCTTCACGAGGGGGAGGGAGCGCAGCCGCCCCCTGGGTAGCATCGTG GACGAGGTACGGTAGGGCAGGGGAACTCGCAAAAAGGAGAAGGAGGGGGG GGGGGTTGTTGAAGGGTGATGGGAGAGAGCAGGGAAGAGGTGGCGGCGCG CGAGAGAGCGAGAGATAAAGAGAGAGAGAGATGTATGAGACGGAGGTCCA TGGGTTCGCAATCCAATTGTACAGAGAAGGAAAGGAGCCAGAGCCACACA AGAAAATAAGCCGGTGAGAGACGTACGTTACGCCGCGATACTGACCGTGT GAGAGAACGGACAAAAATAATAGGAGCACAAGACACGGGGCCCCAACAAC ACGGGGGCAGAGATGAATGAAGGAAGACGGAGACAACGCTACCGTATACG ACACAAGATAACGCACCCCCTGGACCGATTTTCAAAGCTCAAGTACTCCG CAGCGAGAAAGGTGTCGGTCCTGAAAAAGGGCAGCGTTGCAAAGATCTCA TCAAGAGCTGTCCGAGAACGTGTGTCGTTTGGTGCTTGAATCATACTCGT TGCGGAGTAACCGAGCTTTGAAAATCAATCCAGGGGATGTGCTATCTTGT GTGTCGTATACGGTAATCAATGCACACACGCTCACACTATGTATATCTTG TTGGCCCCCTCCGTCGACTTGCCGAACGAAGGCGATGCGCCTGCGAGACG ACGGCGTTCGAGAGATAACCCTCCTGGGCCAGAACGTGAACAGCTACCAC GACCGCTCGGAAGCCTCCGCGGCCCTGTACGGGGGCACGGACTACTCGAC GTCGGCCGGCTTCGGAAACACGTTTCGCTCGAGGGGGGGTGCCGGCGCCT ACTTCGCGGAGCTCCTGGTGGAGGTGTGTATGGGCACTATGTACTTCTTC CGTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12499:1362..4667+

>mRNA_L-elsbetiae_contig12499.2028.1 ID=mRNA_L-elsbetiae_contig12499.2028.1|Name=mRNA_L-elsbetiae_contig12499.2028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2592bp|location=Sequence derived from alignment at L-elsbetiae_contig12499:1362..4667+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAATGCCTACCCATACAAAGCACTTCGACAAGCTCTGACCAGCGGCGT
GTGTCATGGAAGTGGCAGGAGGTGTCTTGCCAGAACACTCTCTTCATCAC
GAAGAGCACCAGGCGACGCAGCAGCAGCAGCATCCGTAGCAGCAGTGGTC
GCACCTGCCGATGCGCCACCAAGACCAGCGGCAAGGACAACCGTGGAGGG
TCCGGGACTCCAAGACTTTATCGCCAAAGTCAGCGACCGCAATGTAAAAG
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCACAAGCGGAATGAGCTCGCCTGCTGCTTGGAACAACGACGACAA
CGACAGCAGTGACGACAACGTTGACCCAGCAACAGCAGCGGCAATCAGGA
GCCACAACGCCCGAAGCGGCGGCGACTCGGGGGCAGAAGTAGAAACGGCA
GGCTCATTCTTCATCGAGACGTACGGCTGCCAGATGAACGTGAGCGACAG
CGAGGTGGTGCGAGCCATCCTGCTCGAGGCGGGCTTCCGGGAAGCGGAGA
GCCTGGAAGACGCCGGCGTTGTTTTGGCCAACACTTGCGCGATTAGAGAG
CGGGCGGAGGGGAAGGTGTGGGACCGCCTCAAATTTTTCTCGTCAATTCG
ATGAATGCCTACCCATACAAAGCACTTCGACAAGCTCTGACCAGCGGCGT
GTGTCATGGAAGTGGCAGGAGGTGTCTTGCCAGAACACTCTCTTCATCAC
GAAGAGCACCAGGCGACGCAGCAGCAGCAGCATCCGTAGCAGCAGTGGTC
GCACCTGCCGATGCGCCACCAAGACCAGCGGCAAGGACAACCGTGGAGGG
TCCGGGACTCCAAGACTTTATCGCCAAAGTCAGCGACCGCAATGTAAAAG
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCACAAGCGGAATGAGCTCGCCTGCTGCTTGGAACAACGACGACAA
CGACAGCAGTGACGACAACGTTGACCCAGCAACAGCAGCGGCAATCAGGA
GCCACAACGCCCGAAGCGGCGGCGACTCGGGGGCAGAAGTAGAAACGGCA
GGCTCATTCTTCATCGAGACGTACGGCTGCCAGATGAACGTGAGCGACAG
CGAGGTGGTGCGAGCCATCCTGCTCGAGGCGGGCTTCCGGGAAGCGGAGA
GCCTGGAAGACGCCGGCGTTGTTTTGGCCAACACTTGCGCGATTAGAGAG
CGGGCGGAGGGGAAGGTGTGGGACCGCCTCAAATTTTTCTCGTCAATTCG
GCGGCGGCGGAAGCTGGCGGCGACCCACGCGGCCAAAGCTCGGCAACCCG
TGCCCGGAGGGCTGAGCGATCTAAAGATAGGCGTCCTCGGCTGCATGGCG
GAACGTCTGAAGGCGGCGGCGGAAGCTGGCGGCGACCCACGCGGCCAAAG
CTCGGCAACCCGTGCCCGGAGGGCTGAGCGATCTAAAGATAGGCGTCCTC
GGCTGCATGGCGGAACGTCTGAAGGAGAGCCTTCTTGAGCGCGGAGGGGT
GGACCTTGTTACCGGGCCCGACGCCTACCGAGATCTCCCTCGACTGCTGG
GGTTGGTCGGGACGGCCGGGAGGGGGGAGAGCGCGGGGGCCGTCAATGTC
CAGGAGAGCCTTCTTGAGCGCGGAGGGGTGGACCTTGTTACCGGGCCCGA
CGCCTACCGAGATCTCCCTCGACTGCTGGGGTTGGTCGGGACGGCCGGGA
GGGGGGAGAGCGCGGGGGCCGTCAATGTCCAGCTCTCGCAGGACGAGACG
TACGCCGACATCGCCCCGGTCCGGCTGGTCAACAACACCTCGGAGGCCGT
GTCGGCGTTCGTCAGCATCATGCGGGGCTGCAACAACATGTGCACCTACT
GCATCGTGCCCTTCACGAGGGGGAGGGAGCGCAGCCGCCCCCTGGGTAGC
ATCGTGGACGAGCTCTCGCAGGACGAGACGTACGCCGACATCGCCCCGGT
CCGGCTGGTCAACAACACCTCGGAGGCCGTGTCGGCGTTCGTCAGCATCA
TGCGGGGCTGCAACAACATGTGCACCTACTGCATCGTGCCCTTCACGAGG
GGGAGGGAGCGCAGCCGCCCCCTGGGTAGCATCGTGGACGAGGCGATGCG
CCTGCGAGACGACGGCGTTCGAGAGATAACCCTCCTGGGCCAGAACGTGA
ACAGCTACCACGACCGCTCGGAAGCCTCCGCGGCCCTGTACGGGGGCACG
GACTACTCGACGTCGGCCGGCTTCGGAAACACGTTTCGCTCGAGGGGGGG
TGCCGGCGCCTACTTCGCGGAGCTCCTGGTGGAGGTGTGTATGGGCACTA
TGTACTTCTTCCGTTGAGCGATGCGCCTGCGAGACGACGGCGTTCGAGAG
ATAACCCTCCTGGGCCAGAACGTGAACAGCTACCACGACCGCTCGGAAGC
CTCCGCGGCCCTGTACGGGGGCACGGACTACTCGACGTCGGCCGGCTTCG
GAAACACGTTTCGCTCGAGGGGGGGTGCCGGCGCCTACTTCGCGGAGCTC
CTGGTGGAGGTGTGTATGGGCACTATGTACTTCTTCCGTTGA
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