mRNA_L-elsbetiae_contig12492.2026.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE) HSP 1 Score: 379 bits (972), Expect = 3.860e-127 Identity = 189/246 (76.83%), Postives = 210/246 (85.37%), Query Frame = 1 Query: 1 QAQVCAAFQNSGILPLIFLNAMFRGSPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEE--------KGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714 +A+VC AFQNSGILPLIFLNAMFRGSP++LSRGVAY SFYLMGWSPTFWTIGN ILTGHL ++ + VPKAKLSLS+R A++PS +K IA PT R++LSPPI+AC+ GLVIGLSPPLRWLLMREGAPLGPMW+AF+NLTAAYTPSGVLVLAGSLANCPPGKWFS+DT+KTILAVGMARW LLPL TSGLLFGGVKYGLVP DPMLLFVLL+ESCMPSAQN+VIMLQ Sbjct: 239 EAKVCMAFQNSGILPLIFLNAMFRGSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQDGXXXXXXXXXXXXXXXXXXXVAAVPKAKLSLSKRVANLPSKVKSIAESPTVRRVLSPPIVACMMGLVIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTQKTILAVGMARWFLLPLATSGLLFGGVKYGLVPPDPMLLFVLLIESCMPSAQNTVIMLQ 484
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A836CLT3_9STRA (Auxin efflux carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT3_9STRA) HSP 1 Score: 231 bits (590), Expect = 2.870e-71 Identity = 123/240 (51.25%), Postives = 157/240 (65.42%), Query Frame = 1 Query: 1 QAQVCAAFQNSGILPLIFLNAMFRGSPQ--MLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714 + QVC+AF NSGILPL+F+NA+FR P +L R +AY+SF+LMGWSP FWT+G LT ++ E + AG + ++ +AS P ++ILSPPI+ACL GL +G+S PLRWLL APL +W + L AAYTPSG+LVLAGSLAN P ++K T K I A+ MARWLLLP+ T LL G VK +VP+DP LLFVL+ME+ MP AQNSVI+LQ Sbjct: 110 EVQVCSAFGNSGILPLLFVNALFRAHPDPTVLPRAIAYISFFLMGWSPAFWTVGYRTLTTGIEPENEEEPALAAGSTATAAGSQXXXXXXXXQALSKAQTALAS-PALKRILSPPIVACLVGLTVGISSPLRWLLTDSNAPLAFLWNSIKVLAAAYTPSGILVLAGSLANAKPQNIWTKATAKKIAAISMARWLLLPIATGALLLGCVKARIVPRDPALLFVLMMEAAMPPAQNSVIILQ 348
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.660e-39 Identity = 97/253 (38.34%), Postives = 141/253 (55.73%), Query Frame = 1 Query: 1 QAQVCAAFQNSGILPLIFLNAMFRG--SPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSL-------------ANCPPGKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714 + ++ AF NSG LPL+F +++F G P M SR VA++SFYL+GWSP FWT G IL+ EK ++ V ++ SI + + P +++ILSPP++ C+ G VIG SP LR L + L P+ A L +AY P+ +L LAG+L +N K S +R + A+ +AR+L+ P+ G+L GL+P DP+L FVLLM++CMPSAQNSV++LQ Sbjct: 186 ELRMSCAFGNSGPLPLLFADSLFAGRADPTMASRAVAFISFYLLGWSPMFWTYGRNILSP--------LEKSSSVEVGRDM------------SIKDKFWALLNDPNSQRILSPPVLGCVLGAVIGSSPQLRSLFIGTAPALKPVTDALRTLGSAYVPAVILTLAGTLHQSVRSPSAVAAASNDKEEKTVSLGSR--VAALMVARFLITPVTAYGMLRVCSHAGLIPADPLLRFVLLMQACMPSAQNSVVILQ 416
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.170e-37 Identity = 96/244 (39.34%), Postives = 132/244 (54.10%), Query Frame = 1 Query: 10 VCAAFQNSGILPLIFLNAMFR---GSPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRKTIL-----AVGMARWLLLPLVTSGLLFGGVKYGLVPQ-DPMLLFVLLMESCMPSAQNSVIMLQ 714 VC+AF NSG LPL+F +A FR P + R VAY+SFYL+ WSP FWT+G+TIL G Q A P P+ R+ P RK LSPP + CL G ++G +P LR + APL ++ A + +AY P+ +LVLAGSLA + S + + L A+ AR+ L+P LL G + L+P DP+L FVLL+++CMP AQN+V++LQ Sbjct: 221 VCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTIL--------GSSTSQPAYAKSPPSPSPS----------PTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQ----GFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQ 442
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A7S1TU85_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU85_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.630e-37 Identity = 95/256 (37.11%), Postives = 135/256 (52.73%), Query Frame = 1 Query: 1 QAQVCAAFQNSGILPLIFLNAMFRGSPQ--MLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPP---------GKWFSKDT-------RKTILAVGMARWLLLPLVTSGLLFGGVKYGLV-PQDPMLLFVLLMESCMPSAQNSVIML 711 + Q+C+ F NSG LPL+ ++A FR P +L V YVSFYL+GWSP FWT + I E K + Q A+ E+ + + + AS P +++LSPPI+ C++GL I P L L + AP P+ A + + Y P VLVLAGS AN W +K K +L++ AR+L++P V G++ G + GLV P + +L F+LLME CMPSAQNSV++L Sbjct: 127 ELQICSTFGNSGPLPLLLVDAFFRNHPDPTLLPAAVGYVSFYLLGWSPAFWTFASAIAA--TPEPKSAAKPQAV---------AEAEAGEKKSPLKAFTDWYAS-PWGKRMLSPPIIGCMSGLTIASVPLLSTLFLGPTAPFSPLTDAIRTIGSGYLPCVVLVLAGSFANSAARGGAAGEVASSWEAKVAGMQRARQTKALLSILCARFLIMPAVALGMMTGLTQLGLVSPTNHLLRFILLMEGCMPSAQNSVVIL 370
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A5J4YJ85_PORPP (Protein PIN-LIKES 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ85_PORPP) HSP 1 Score: 138 bits (348), Expect = 9.990e-35 Identity = 86/243 (35.39%), Postives = 129/243 (53.09%), Query Frame = 1 Query: 10 VCAAFQNSGILPLIFLNAMFRGSPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGK--------WFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714 V AF NS LPL+F N +F P + V+ +SF+L+GWSP FW+IG I+ G + G + A + ++ I + ++++ P ++ +PPI+ L+GL++G P LR + +GAPLG ++ + + L AAY P VLVLAGSLA+ K S + K I AV R+ L+PL G L + P+L F +L+ES MP+AQN+V+MLQ Sbjct: 199 VSCAFGNSAALPLLFANNLFAADPVRQAGLVSGISFFLLGWSPLFWSIGYMIMAGEASTKSAGATQLAAPSLNADARTG----------IRARIQQLVRHPMVARVFAPPIVGALSGLLVGSIPVLRRAFLADGAPLGILFESLSGLGAAYVPCAVLVLAGSLASNVGKKKQDGDVSAGISAEDLKQIAAVSFVRFCLVPLFAVGSLIATRRVLGATLRPILQFTILLESVMPAAQNTVLMLQ 431
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.490e-33 Identity = 94/301 (31.23%), Postives = 148/301 (49.17%), Query Frame = 1 Query: 1 QAQVCAAFQNSGILPLIFLNAMFRGSPQ--MLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQ---------------------------------TAGMVFSE------------------------VPKAKLSLSERAASIPSTL---KRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVP-QDPMLLFVLLMESCMPSAQNSVIMLQ 714 + ++C+ F N+G LPL+F++A+F+ P + +R VA++SFYL+ WSP FW G IL E+ GG++ Q A MV E VP ++ A + S L +R+A +K+L+PP + C G ++G+ PLR LL + AP +++A + +AY P +L+L+GSLA G F + + + V R+ ++P V + G + GL+P QDP+LLFV+L++ CMPSAQNSV++LQ Sbjct: 124 EVRICSTFANAGPLPLLFVDALFKNHPDPTLRTRAVAFISFYLLAWSPLFWNYGYGILVDKT-EDTGGKKGQPMEYSSLGTQSVGGPRLGSGTGGAGMMVNGNGSAAAMVLEEGVDGKETHATNWTSPHQQQYSRQQVPCSEGRSYPSHALVRSALEKARRVAHSRAMKKLLNPPTLGCTLGALVGVCSPLRGLLFGDTAPFSCVFSALRTMGSAYVPCVLLILSGSLAQGLEG--FDSNVFRRAMLVMFQRFCIMPAVAFACVETGKRTGLLPTQDPLLLFVILLQGCMPSAQNSVLILQ 421
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A482USC9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482USC9_9ARCH) HSP 1 Score: 134 bits (336), Expect = 4.090e-33 Identity = 93/247 (37.65%), Postives = 125/247 (50.61%), Query Frame = 1 Query: 1 QAQVCAAFQNSGILPLIFLNAMFRG--SPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRK------------TILAVGMARWLLLPLVTSGLLFGGVKYG-----LVPQDPMLLFVLLMESCMP 684 Q Q C F NSG LPL+F + +FR +P +L + VAY+S YL+GWSP FW G IL GG T + R AS + KR ++I SPP++ L G+V+G +P LR L+ G L P + A L AAY P+ +LVLAGSLA P S + K IL + +AR+LL+PL+ L+ G + L +DPMLL VLL+E+CMP Sbjct: 226 QLQACTTFGNSGPLPLVFTDGLFRAHSNPLLLQQSVAYISLYLLGWSPLFWIAGPAIL----QRSSGGTSGGTTNV--------------RDASEEAAKKR---AELVKRIFSPPVVGSLMGMVVGFTPFLRKLITSPGGLLNPAYEAMRTLGAAYLPAVLLVLAGSLAASPTPSEVSAEGNKGGGNKGVRGLVLDILPIFIARFLLMPLLGFSLVSLGRRSSPWLDTLFAKDPMLLLVLLLETCMP 451
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A0G4EKC6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EKC6_VITBC) HSP 1 Score: 132 bits (331), Expect = 3.470e-32 Identity = 92/263 (34.98%), Postives = 138/263 (52.47%), Query Frame = 1 Query: 7 QVCAAFQNSGILPLIFLNAMFRG--SPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTG--------HLDEEKGGQEKQTAGMVFS----EVPKA----------KLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKW---FSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714 ++ +F N+G LP++F NA+FR P ++++ +Y++FYL +P W+ G +IL G H+DE+ A S +VP L L R T+K++ P ++LSP +++CLAG+VIG SP LR +L+ GAPL +W A L + P+ LVLAGS G+ S + +L V AR++ P + LL G + GL+ DP L FVLLM+ CMP+AQ SV++LQ Sbjct: 195 KMLCSFSNAGPLPILFTNALFRDHPDPSVMAKVNSYIAFYLTVQAPMMWSYGYSILAGMPTRPVKHHVDEDDPQWADAFADWGMSPSLEQVPPPPRPAPPPFPRSLFLQVR-----RTVKQLWLHPFRPRLLSPAVISCLAGIVIGTSPLLRQMLVAPGAPLTFIWGALQILGQGFRPAAALVLAGSFVTPSGGESDTVISLRNFRRVLPVAFARFVCAPTIAFTLLTIGRRLGLIMNDPFLWFVLLMQGCMPAAQQSVVILQ 452
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A0G4FFE0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FFE0_9ALVE) HSP 1 Score: 128 bits (322), Expect = 4.270e-31 Identity = 80/242 (33.06%), Postives = 132/242 (54.55%), Query Frame = 1 Query: 1 QAQVCAAFQNSGILPLIFLNAMFRGSPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPP----GKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714 + + +AF NSG +PL+F+NAM+R P+ L +Y+SF+L+ SP W+ G +LT EE G++ SE +S+S ++A+ + + +I SP ++A LAG+ G PLR L + L +W A L+ + P+ L+LAG+LA+ P K+ K + + + R+++ PL+ L+ + GL+ +DP+L F+LL++ MPSAQ SV+MLQ Sbjct: 184 RVRALSAFTNSGPVPLLFVNAMYRSQPETLRILSSYISFFLLAQSPLLWSYGYHVLTCERTEEMEGKKLSMDAEGLSE----SVSVSAKSANGKDGWRGLVE-----RIFSPAMIASLAGICFGAFGPLRELFVVRSGLLNFVWGALVTLSEGFRPTAALILAGALASGRPFGGDDPLIGKNNAKRAVPLAVYRFMIAPLINLCLVLSLRRMGLLGEDPLLAFILLLQGVMPSAQQSVVMLQ 416 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12492.2026.1 >prot_L-elsbetiae_contig12492.2026.1 ID=prot_L-elsbetiae_contig12492.2026.1|Name=mRNA_L-elsbetiae_contig12492.2026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp QAQVCAAFQNSGILPLIFLNAMFRGSPQMLSRGVAYVSFYLMGWSPTFWTback to top mRNA from alignment at L-elsbetiae_contig12492:398..5439- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12492.2026.1 ID=mRNA_L-elsbetiae_contig12492.2026.1|Name=mRNA_L-elsbetiae_contig12492.2026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5042bp|location=Sequence derived from alignment at L-elsbetiae_contig12492:398..5439- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12492:398..5439- >mRNA_L-elsbetiae_contig12492.2026.1 ID=mRNA_L-elsbetiae_contig12492.2026.1|Name=mRNA_L-elsbetiae_contig12492.2026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig12492:398..5439- (Laminarionema elsbetiae ELsaHSoW15)back to top |