mRNA_L-elsbetiae_contig12492.2026.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12492.2026.1
Unique NamemRNA_L-elsbetiae_contig12492.2026.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 3.860e-127
Identity = 189/246 (76.83%), Postives = 210/246 (85.37%), Query Frame = 1
Query:    1 QAQVCAAFQNSGILPLIFLNAMFRGSPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEE--------KGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714
            +A+VC AFQNSGILPLIFLNAMFRGSP++LSRGVAY SFYLMGWSPTFWTIGN ILTGHL ++                     + VPKAKLSLS+R A++PS +K IA  PT R++LSPPI+AC+ GLVIGLSPPLRWLLMREGAPLGPMW+AF+NLTAAYTPSGVLVLAGSLANCPPGKWFS+DT+KTILAVGMARW LLPL TSGLLFGGVKYGLVP DPMLLFVLL+ESCMPSAQN+VIMLQ
Sbjct:  239 EAKVCMAFQNSGILPLIFLNAMFRGSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQDGXXXXXXXXXXXXXXXXXXXVAAVPKAKLSLSKRVANLPSKVKSIAESPTVRRVLSPPIVACMMGLVIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTQKTILAVGMARWFLLPLATSGLLFGGVKYGLVPPDPMLLFVLLIESCMPSAQNTVIMLQ 484          
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A836CLT3_9STRA (Auxin efflux carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT3_9STRA)

HSP 1 Score: 231 bits (590), Expect = 2.870e-71
Identity = 123/240 (51.25%), Postives = 157/240 (65.42%), Query Frame = 1
Query:    1 QAQVCAAFQNSGILPLIFLNAMFRGSPQ--MLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714
            + QVC+AF NSGILPL+F+NA+FR  P   +L R +AY+SF+LMGWSP FWT+G   LT  ++ E   +    AG   +              ++      +AS P  ++ILSPPI+ACL GL +G+S PLRWLL    APL  +W +   L AAYTPSG+LVLAGSLAN  P   ++K T K I A+ MARWLLLP+ T  LL G VK  +VP+DP LLFVL+ME+ MP AQNSVI+LQ
Sbjct:  110 EVQVCSAFGNSGILPLLFVNALFRAHPDPTVLPRAIAYISFFLMGWSPAFWTVGYRTLTTGIEPENEEEPALAAGSTATAAGSQXXXXXXXXQALSKAQTALAS-PALKRILSPPIVACLVGLTVGISSPLRWLLTDSNAPLAFLWNSIKVLAAAYTPSGILVLAGSLANAKPQNIWTKATAKKIAAISMARWLLLPIATGALLLGCVKARIVPRDPALLFVLMMEAAMPPAQNSVIILQ 348          
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.660e-39
Identity = 97/253 (38.34%), Postives = 141/253 (55.73%), Query Frame = 1
Query:    1 QAQVCAAFQNSGILPLIFLNAMFRG--SPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSL-------------ANCPPGKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714
            + ++  AF NSG LPL+F +++F G   P M SR VA++SFYL+GWSP FWT G  IL+          EK ++  V  ++            SI      + + P +++ILSPP++ C+ G VIG SP LR L +     L P+  A   L +AY P+ +L LAG+L             +N    K  S  +R  + A+ +AR+L+ P+   G+L      GL+P DP+L FVLLM++CMPSAQNSV++LQ
Sbjct:  186 ELRMSCAFGNSGPLPLLFADSLFAGRADPTMASRAVAFISFYLLGWSPMFWTYGRNILSP--------LEKSSSVEVGRDM------------SIKDKFWALLNDPNSQRILSPPVLGCVLGAVIGSSPQLRSLFIGTAPALKPVTDALRTLGSAYVPAVILTLAGTLHQSVRSPSAVAAASNDKEEKTVSLGSR--VAALMVARFLITPVTAYGMLRVCSHAGLIPADPLLRFVLLMQACMPSAQNSVVILQ 416          
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.170e-37
Identity = 96/244 (39.34%), Postives = 132/244 (54.10%), Query Frame = 1
Query:   10 VCAAFQNSGILPLIFLNAMFR---GSPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRKTIL-----AVGMARWLLLPLVTSGLLFGGVKYGLVPQ-DPMLLFVLLMESCMPSAQNSVIMLQ 714
            VC+AF NSG LPL+F +A FR     P +  R VAY+SFYL+ WSP FWT+G+TIL        G    Q A       P             P+   R+   P  RK LSPP + CL G ++G +P LR +     APL  ++ A   + +AY P+ +LVLAGSLA      + S + +   L     A+  AR+ L+P     LL  G  + L+P  DP+L FVLL+++CMP AQN+V++LQ
Sbjct:  221 VCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTIL--------GSSTSQPAYAKSPPSPSPS----------PTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQ----GFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQ 442          
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A7S1TU85_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU85_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.630e-37
Identity = 95/256 (37.11%), Postives = 135/256 (52.73%), Query Frame = 1
Query:    1 QAQVCAAFQNSGILPLIFLNAMFRGSPQ--MLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPP---------GKWFSKDT-------RKTILAVGMARWLLLPLVTSGLLFGGVKYGLV-PQDPMLLFVLLMESCMPSAQNSVIML 711
            + Q+C+ F NSG LPL+ ++A FR  P   +L   V YVSFYL+GWSP FWT  + I      E K   + Q           A+    E+ + + +     AS P  +++LSPPI+ C++GL I   P L  L +   AP  P+  A   + + Y P  VLVLAGS AN              W +K          K +L++  AR+L++P V  G++ G  + GLV P + +L F+LLME CMPSAQNSV++L
Sbjct:  127 ELQICSTFGNSGPLPLLLVDAFFRNHPDPTLLPAAVGYVSFYLLGWSPAFWTFASAIAA--TPEPKSAAKPQAV---------AEAEAGEKKSPLKAFTDWYAS-PWGKRMLSPPIIGCMSGLTIASVPLLSTLFLGPTAPFSPLTDAIRTIGSGYLPCVVLVLAGSFANSAARGGAAGEVASSWEAKVAGMQRARQTKALLSILCARFLIMPAVALGMMTGLTQLGLVSPTNHLLRFILLMEGCMPSAQNSVVIL 370          
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A5J4YJ85_PORPP (Protein PIN-LIKES 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ85_PORPP)

HSP 1 Score: 138 bits (348), Expect = 9.990e-35
Identity = 86/243 (35.39%), Postives = 129/243 (53.09%), Query Frame = 1
Query:   10 VCAAFQNSGILPLIFLNAMFRGSPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGK--------WFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714
            V  AF NS  LPL+F N +F   P   +  V+ +SF+L+GWSP FW+IG  I+ G    +  G  +  A  + ++              I + ++++   P   ++ +PPI+  L+GL++G  P LR   + +GAPLG ++ + + L AAY P  VLVLAGSLA+    K          S +  K I AV   R+ L+PL   G L    +       P+L F +L+ES MP+AQN+V+MLQ
Sbjct:  199 VSCAFGNSAALPLLFANNLFAADPVRQAGLVSGISFFLLGWSPLFWSIGYMIMAGEASTKSAGATQLAAPSLNADARTG----------IRARIQQLVRHPMVARVFAPPIVGALSGLLVGSIPVLRRAFLADGAPLGILFESLSGLGAAYVPCAVLVLAGSLASNVGKKKQDGDVSAGISAEDLKQIAAVSFVRFCLVPLFAVGSLIATRRVLGATLRPILQFTILLESVMPAAQNTVLMLQ 431          
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.490e-33
Identity = 94/301 (31.23%), Postives = 148/301 (49.17%), Query Frame = 1
Query:    1 QAQVCAAFQNSGILPLIFLNAMFRGSPQ--MLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQ---------------------------------TAGMVFSE------------------------VPKAKLSLSERAASIPSTL---KRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVP-QDPMLLFVLLMESCMPSAQNSVIMLQ 714
            + ++C+ F N+G LPL+F++A+F+  P   + +R VA++SFYL+ WSP FW  G  IL     E+ GG++ Q                                  A MV  E                        VP ++       A + S L   +R+A     +K+L+PP + C  G ++G+  PLR LL  + AP   +++A   + +AY P  +L+L+GSLA    G  F  +  +  + V   R+ ++P V    +  G + GL+P QDP+LLFV+L++ CMPSAQNSV++LQ
Sbjct:  124 EVRICSTFANAGPLPLLFVDALFKNHPDPTLRTRAVAFISFYLLAWSPLFWNYGYGILVDKT-EDTGGKKGQPMEYSSLGTQSVGGPRLGSGTGGAGMMVNGNGSAAAMVLEEGVDGKETHATNWTSPHQQQYSRQQVPCSEGRSYPSHALVRSALEKARRVAHSRAMKKLLNPPTLGCTLGALVGVCSPLRGLLFGDTAPFSCVFSALRTMGSAYVPCVLLILSGSLAQGLEG--FDSNVFRRAMLVMFQRFCIMPAVAFACVETGKRTGLLPTQDPLLLFVILLQGCMPSAQNSVLILQ 421          
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A482USC9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482USC9_9ARCH)

HSP 1 Score: 134 bits (336), Expect = 4.090e-33
Identity = 93/247 (37.65%), Postives = 125/247 (50.61%), Query Frame = 1
Query:    1 QAQVCAAFQNSGILPLIFLNAMFRG--SPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKWFSKDTRK------------TILAVGMARWLLLPLVTSGLLFGGVKYG-----LVPQDPMLLFVLLMESCMP 684
            Q Q C  F NSG LPL+F + +FR   +P +L + VAY+S YL+GWSP FW  G  IL        GG    T  +              R AS  +  KR       ++I SPP++  L G+V+G +P LR L+   G  L P + A   L AAY P+ +LVLAGSLA  P     S +  K             IL + +AR+LL+PL+   L+  G +       L  +DPMLL VLL+E+CMP
Sbjct:  226 QLQACTTFGNSGPLPLVFTDGLFRAHSNPLLLQQSVAYISLYLLGWSPLFWIAGPAIL----QRSSGGTSGGTTNV--------------RDASEEAAKKR---AELVKRIFSPPVVGSLMGMVVGFTPFLRKLITSPGGLLNPAYEAMRTLGAAYLPAVLLVLAGSLAASPTPSEVSAEGNKGGGNKGVRGLVLDILPIFIARFLLMPLLGFSLVSLGRRSSPWLDTLFAKDPMLLLVLLLETCMP 451          
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A0G4EKC6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EKC6_VITBC)

HSP 1 Score: 132 bits (331), Expect = 3.470e-32
Identity = 92/263 (34.98%), Postives = 138/263 (52.47%), Query Frame = 1
Query:    7 QVCAAFQNSGILPLIFLNAMFRG--SPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTG--------HLDEEKGGQEKQTAGMVFS----EVPKA----------KLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPPGKW---FSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714
            ++  +F N+G LP++F NA+FR    P ++++  +Y++FYL   +P  W+ G +IL G        H+DE+        A    S    +VP             L L  R      T+K++   P   ++LSP +++CLAG+VIG SP LR +L+  GAPL  +W A   L   + P+  LVLAGS      G+     S    + +L V  AR++  P +   LL  G + GL+  DP L FVLLM+ CMP+AQ SV++LQ
Sbjct:  195 KMLCSFSNAGPLPILFTNALFRDHPDPSVMAKVNSYIAFYLTVQAPMMWSYGYSILAGMPTRPVKHHVDEDDPQWADAFADWGMSPSLEQVPPPPRPAPPPFPRSLFLQVR-----RTVKQLWLHPFRPRLLSPAVISCLAGIVIGTSPLLRQMLVAPGAPLTFIWGALQILGQGFRPAAALVLAGSFVTPSGGESDTVISLRNFRRVLPVAFARFVCAPTIAFTLLTIGRRLGLIMNDPFLWFVLLMQGCMPAAQQSVVILQ 452          
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Match: A0A0G4FFE0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FFE0_9ALVE)

HSP 1 Score: 128 bits (322), Expect = 4.270e-31
Identity = 80/242 (33.06%), Postives = 132/242 (54.55%), Query Frame = 1
Query:    1 QAQVCAAFQNSGILPLIFLNAMFRGSPQMLSRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRIASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNLTAAYTPSGVLVLAGSLANCPP----GKWFSKDTRKTILAVGMARWLLLPLVTSGLLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ 714
            + +  +AF NSG +PL+F+NAM+R  P+ L    +Y+SF+L+  SP  W+ G  +LT    EE  G++        SE     +S+S ++A+     + +       +I SP ++A LAG+  G   PLR L +     L  +W A   L+  + P+  L+LAG+LA+  P         K+  K  + + + R+++ PL+   L+    + GL+ +DP+L F+LL++  MPSAQ SV+MLQ
Sbjct:  184 RVRALSAFTNSGPVPLLFVNAMYRSQPETLRILSSYISFFLLAQSPLLWSYGYHVLTCERTEEMEGKKLSMDAEGLSE----SVSVSAKSANGKDGWRGLVE-----RIFSPAMIASLAGICFGAFGPLRELFVVRSGLLNFVWGALVTLSEGFRPTAALILAGALASGRPFGGDDPLIGKNNAKRAVPLAVYRFMIAPLINLCLVLSLRRMGLLGEDPLLAFILLLQGVMPSAQQSVVMLQ 416          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12492.2026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMD6_9PHAE3.860e-12776.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLT3_9STRA2.870e-7151.25Auxin efflux carrier n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2SS74_9STRA2.660e-3938.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U1P2_9STRA2.170e-3739.34Membrane transporter n=3 Tax=Monodopsidaceae TaxID... [more]
A0A7S1TU85_9STRA2.630e-3737.11Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A5J4YJ85_PORPP9.990e-3535.39Protein PIN-LIKES 1 n=1 Tax=Porphyridium purpureum... [more]
A0A4D9D5S5_9STRA2.490e-3331.23Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A482USC9_9ARCH4.090e-3337.65Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A0G4EKC6_VITBC3.470e-3234.98Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0G4FFE0_9ALVE4.270e-3133.06Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12492contigL-elsbetiae_contig12492:398..5439 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score390.6
Seed ortholog evalue5.3e-106
Seed eggNOG ortholog2880.D7G8U0
KEGG koko:K07088
Hectar predicted targeting categoryother localisation
EggNOG free text desc.auxin efflux carrier
EggNOG OGsCOG0679@1,KOG2722@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons6
Model size714
Cds size714
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12492.2026.1prot_L-elsbetiae_contig12492.2026.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12492 398..5439 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815443.7723463-CDS-L-elsbetiae_contig12492:397..5131622815443.7723463-CDS-L-elsbetiae_contig12492:397..513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 398..513 -
1691682900.571281-CDS-L-elsbetiae_contig12492:397..5131691682900.571281-CDS-L-elsbetiae_contig12492:397..513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 398..513 -
1622815443.7856884-CDS-L-elsbetiae_contig12492:886..10341622815443.7856884-CDS-L-elsbetiae_contig12492:886..1034Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 887..1034 -
1691682900.5875556-CDS-L-elsbetiae_contig12492:886..10341691682900.5875556-CDS-L-elsbetiae_contig12492:886..1034Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 887..1034 -
1622815443.8016212-CDS-L-elsbetiae_contig12492:2352..25061622815443.8016212-CDS-L-elsbetiae_contig12492:2352..2506Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 2353..2506 -
1691682900.5986748-CDS-L-elsbetiae_contig12492:2352..25061691682900.5986748-CDS-L-elsbetiae_contig12492:2352..2506Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 2353..2506 -
1622815443.8149643-CDS-L-elsbetiae_contig12492:3970..40391622815443.8149643-CDS-L-elsbetiae_contig12492:3970..4039Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 3971..4039 -
1691682900.6069503-CDS-L-elsbetiae_contig12492:3970..40391691682900.6069503-CDS-L-elsbetiae_contig12492:3970..4039Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 3971..4039 -
1622815443.8254576-CDS-L-elsbetiae_contig12492:4796..49101622815443.8254576-CDS-L-elsbetiae_contig12492:4796..4910Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 4797..4910 -
1691682900.6150944-CDS-L-elsbetiae_contig12492:4796..49101691682900.6150944-CDS-L-elsbetiae_contig12492:4796..4910Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 4797..4910 -
1622815443.8365486-CDS-L-elsbetiae_contig12492:5326..54391622815443.8365486-CDS-L-elsbetiae_contig12492:5326..5439Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 5327..5439 -
1691682900.6233306-CDS-L-elsbetiae_contig12492:5326..54391691682900.6233306-CDS-L-elsbetiae_contig12492:5326..5439Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12492 5327..5439 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12492.2026.1

>prot_L-elsbetiae_contig12492.2026.1 ID=prot_L-elsbetiae_contig12492.2026.1|Name=mRNA_L-elsbetiae_contig12492.2026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
QAQVCAAFQNSGILPLIFLNAMFRGSPQMLSRGVAYVSFYLMGWSPTFWT
IGNTILTGHLDEEKGGQEKQTAGMVFSEVPKAKLSLSERAASIPSTLKRI
ASGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFTNL
TAAYTPSGVLVLAGSLANCPPGKWFSKDTRKTILAVGMARWLLLPLVTSG
LLFGGVKYGLVPQDPMLLFVLLMESCMPSAQNSVIMLQ
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mRNA from alignment at L-elsbetiae_contig12492:398..5439-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12492.2026.1 ID=mRNA_L-elsbetiae_contig12492.2026.1|Name=mRNA_L-elsbetiae_contig12492.2026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5042bp|location=Sequence derived from alignment at L-elsbetiae_contig12492:398..5439- (Laminarionema elsbetiae ELsaHSoW15)
CAAGCACAGGTGTGCGCCGCATTCCAGAACAGCGGGATTCTTCCGTTGAT TTTCCTGAACGCCATGTTCAGGGGGAGCCCGCAGATGCTCTCGCGCGGCG TCGCGTACGTGAGGTGCGCGTCGCTGCCTGCTCTGCTGATTCCACCCGTC GTGCGATTTTTTTTGTGTGAAGGAGAGCTTTTTGGCGCTCGCTTGTGTGC GTGTACGTGAGCGAGGCCAACGCGCTGGGACCGGCACCGCAAGGGGTGCT GTCACTATTGGTGCTGGTGTTAGTGTCGGTGGTTGTCGGTGGTTCTGTTG ATGTTGACGCCCTGTCGTCCGTCTGTCGGAGAGAGCGGGGCAGATGGAGG GCCGGGAGTTTGGAAAATCTGACAACTTGTTGCTATTTATCTATATTTAG TGAAGAACCGATTGGATGTCCTCGATAAATATGTACAACTCCTTTACCGC CCCCAGAATAATCTTGTCGTGTACTCCTTTGCGTTGCTCGGACATTACAT ACCCCTACTCTCACTTGCGGCCCTCAAAGCTTCTACTTGATGGGGTGGAG CCCCACCTTTTGGACGATTGGAAACACCATCCTCACCGGCCACCTGGACG AAGAAAAAGGCGGGCAGGAGAAACAGACCGCCGGTATGGTTTTGTGGATA CATGCATACGCGTTGCGGTGATGCAGAGCATGCCTTACATGTATGTATGT CGAAGGGAGGCGGGATGATCCCAGCTTGATTTCCACATCACCACGGGGAA GCTTACAAACGCATTGCGGTGATGCAGAGTGTGGCATACATGTATGTGTA TCGAACGGAGGCGGGATGATCCCAGCTTGATTTCCACGTCACCACCACGA GGAAGCTTACATACGCGTTGCGGTGATGAAGAATATGCCATACACGTATG TCGAAGGGAGGCGGGATGATCCCAACTTGATTTCCACATCATCACCACTA CGGGGAAGCTCGGGCCGAACGCTACATCATTCATGCCCTTCCTTCCATCG TGTTGTTTGTTTTCGAAGCGCTCCCTCCGACAAAGGCCGCGGGCAAGGGT CCCCGCGGTGTTGTTGTCCTTCTCGCGGTGTCCCCCCTCCCGGGCAGGGA GCGCGGCGCACAGGGCACGATGTAGCTAGAAGTTACAGCTTTCACCGGGT GTGGGCCTTTCCACATCATTTTTTTACTAGTGAAAGAGTTCGTCCGCTTA TTTATCAGTGCCATTGGTTTCCATCCGAATCTTCACCTCAGCACGCTATC GCACGCTGATCTTTTACGTGTACACCGGCTGCTTTTGTGCTTCAATTGCT GATACACATGGATATATATATGTACCGGCTGCTGTTGTGCTTCAATTGCA GCCGCAGCGTCAACAACACCCGTTGCCCTCTCTGCACCGGTAGGTGGAAG TTCGGAAGTACCAAAGGCGAAGCTAAGTCTGTCGGAGCGCGCGGCGAGTA TTCCTTCCACGCTCAAGAGGTGAGGGCAGACGTGCATGGTGCCTCGTGGT GGTATTTGGAGGGGGGGGGGGGGCGCACAAATATGGAGAAAGTGCATGTT TCACAACGCACTAGCACGAGATGGAGCGTTATTTAATGTCCTTACAGATC TGCCGTCGCCCCGGTGGTCTAGTTGGTACCCCCGAACACCTTCTAGCAGG CAGGTCGTGAGTTCGAATCTCAGCGAAAGCGACTTTTTCTTGCGATCCGA GTCTCTTCTCTCGCTTCCGCCCCTGTCAGTGGATAGCGCTTAGCGTGTGT ACACAAACTTCGACCTCACCGTCGACGAGGGAAAGGGACAGCTGAATGAA CCCTTCTCGCGGCAAAAATCTGAGGCAAGCACCGCAGACGGGGGGAGCGG GGGCCTTGGGGAGAGAAACCCTTCTGTGAGACCACGGTTCAGTACTCTGG CAAGATGTCCTCGTGACAGGGAGCCCATCGAGCACTGGAAATAAATGTGA AAAAAAAAAAAAAAGATAGACGCACCAGCCACCAGCATTGGACTTCATTG TCGACGAGGGTGGGGAGTGCTGAACCCTGCTCGCGATAAAAACATCTAAC GCGGGCACCGCAGGAGGTGGTCCAACCCCCCCTCCTGTGTGGCCCCGGTT GGGTCGTCTAGCTAGTCGCAGTGGAGGGAGGGGGCCAGTGGGGCAGACGA CAAATATGCCAAAAATGGGCGGGGAAAAAAAACAAAAAACAAACGGGACG CTCGTGAGGTTGCTTGCACCAACTCACTCCAAACCTTGTTGCTTGCCTAA CCCCCCTTCTGCGGTTCTGTTAGCCATCACCTCTTCGTTGACGGCGTTGG CGAGGGCTTTCGCGACTTTATCGCTTTTGTTGCGCTGCTGAAATTGTGCT GTCTAGCGAGAAGCGGACCCGCTTCTTTCCACCAAGGGGCGCAGTGTATT CACGTATTTGATCGGGGGGGGGGGGGGGGGTGCGAGAAGCGGACCCGCTT GCCACGGCCATCAGCAGGGTGCCGTCCTGGTTTGTACAGGGCGTTGTGCG TAATCGCAGTACGTACGACGCAGTTCGTAAGCATCGTAAGCCTCATCACC GTCCAATTGTGCAGGGGGCTTTGTGTGCGCACGACGCAGCTCATCGTAAG CGTTAGCGCCGTTACCGTCCCGCTTGATATCGATCACCGGAAATGCTAAC AACACAAGAAGAGGCGTTTGTACCCTCCCCCCGCGGTTTGATGTCGCTCT TTTGTCTCGCTCGCCCGACTCTACACACGTAACCCTCGAAAAAAGGTCTC ACATTTGTATTTTACACGTGCGTACTTTCAACTTATTCTGCATATATATA TATAGGTATATACATAACTTTGCATACATAACAATATTGACAACAGCAGC GATTTTTACAAGGTCGAATTAACTCGTTTTTAAATGTTACATATGTAAAC TTCGCGTGAATATTGCAACAATGTTGACGACAGGATCGCTAGCGGCCCCA CCGCCCGAAAGATCTTGAGCCCGCCGATCATGGCCTGCCTAGCGGGGCTG GTGATCGGCCTCAGCCCTCCCCTCCGGTGGCTGCTGATGAGAGAGGGGGC CCCGCTGGGTCCGATGTGGGCCGCCTTCACCAACTTGGTGAGACTCTAAG GGAGCACACAGACGCGAAGGAGCGTCCGCAGTAATAGTGGAAGGCTCGCC ACTTCAAGTTCGAGTTCGTTGTCTTCGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGTGATTCTTGCGGATGGCGAGAGAAGGACCACCGAATGTGTTCC GCGCGAACGGATATCGTGCGGCTGTTCCTGTTTTCGTTGTTTGCGGGTTG GTGAGAGAACAACGCGCTTACGCGGCCGCATGTCATGTGTCGTGGCATGG CCAGTGAACAACCACAGGCCTAGCTAGAGAGCGAGAGAGACACCGCAGGT TTTTCAGGCGGTGGGAGGGGCCGACTCGTAGGTTTGGAGTATCGTGGCGG CTCTGCACAAGAGTGCATAGTGGCTGTTTTCAGCAACAGCAGCGGGAGTG TACCAAACACGGCGAGGCACTTGTTACGCGGCCTTTACTGCTTCAGACCG AAGTCGGGAATCCTAACGAGGTTGTACCGTAGGTGACACAAGATACGACA CCCCCTGGACATATTTTCAAAGCTCGATTCCTCCCCAGCAAAAAGAGTGC TAGTGTCCAAAGGGGTGGCGTTCGAAAGATCTAGTCGAGGGCTGTCCGAA AATGTGCCGTTTGGTGATGGCACTCTCTTCGTTACGGAGTAATGGAGCTC TCAAATTCGATCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTACTTTC AGGAACTGGGTACTCAAAACAGGCGGAGAAGTTGCCACATTTTATTTTTG CCGAAAATGTGTGTACAATGAAGTTGAACAATGAAGTTGGTTGATGTGTA TGGATGTACGCGGTTGCATTCTCAGCAAAAGCGCACAACTTCTCCAAAAT AAGACTATTTTTATGATGACCAGCCCTGTAAAGAACAAACCAAGGGGACG GATATACTTTGCTTCGCCGCTAAATACCGCTTGGTTTTTGGCACTTTGCC TTCGGAGAACCGGGGTTTTGTTTTGACCGCAAGTATGTAGCTGATTGGAC GACCATAGTTTGTGTATCCAGAACCGGGATAAAAAGTGTCGCTCTTGCTG TTGCAACATGGAAATATGGTTTATGTTTGTATGTTTGACCCGTTCTACCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCTCCTGTTTTTTTTTTTTTTTCTAAAATGAAAA TTTGTTTTTTTTTTTTTTTTTTGCCCCGTCTCCCCCCCCCCCCCCCCCCC TCCCACCCGCAACACTTATGGACGCACCGCGGTGGCAAATACGCGACCAA ATCAGACGGCAGCGTACACGCCATCTGGCGTTCTGGTTCTAGCGGGGAGC CTCGCAAACTGCCCTCCTGGCAAGTGGTTCTCCAAGGACACGCGGAAGAC AATTTTGGCGGTGGGCATGGCGAGGTGGCTACTGCTGCCGCTGGTGACGT CAGGTGTGACAAATCAACGCAAGCTTATACTCGTTGTGGGACCGATTCTT AAGTAGAGCATCCTGTGGTCACGGGAGTTGCGTGACTACCCTAACTTTTT TTGACGTCGCGACACGTCAAAGGAATGCTGTAGCCTGTTGATCATTTTGG GAGAAAAATTCGAAGACATGTATACTTCTATATGTATATCCCCGGCCAAC GCGCTGCAGAAGATGAAACATACGGAAATCGAGAATGGCACACAGATGGA ATGAGCGAAGCTTGAAGAGTGCGTTCGCGTCGACGCTTCGTTCGCTCTGA AGTAGTTTTCTTCAGGGCACTGCTGCGTTTGCGCTTTATTTGTGAACAGT CGCCCCGGGGTGATATGCTTTGGCAGGGCTGCTGTTCGGCGGGGTGAAAT ACGGGCTGGTGCCGCAGGATCCGATGCTCCTGTTTGTGCTGCTCATGGAG TCCTGTATGCCGTCGGCACAGAACTCGGTCATCATGCTCCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12492:398..5439-

>mRNA_L-elsbetiae_contig12492.2026.1 ID=mRNA_L-elsbetiae_contig12492.2026.1|Name=mRNA_L-elsbetiae_contig12492.2026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig12492:398..5439- (Laminarionema elsbetiae ELsaHSoW15)
CAAGCACAGGTGTGCGCCGCATTCCAGAACAGCGGGATTCTTCCGTTGAT
TTTCCTGAACGCCATGTTCAGGGGGAGCCCGCAGATGCTCTCGCGCGGCG
TCGCGTACGTGAGCAAGCACAGGTGTGCGCCGCATTCCAGAACAGCGGGA
TTCTTCCGTTGATTTTCCTGAACGCCATGTTCAGGGGGAGCCCGCAGATG
CTCTCGCGCGGCGTCGCGTACGTGAGCTTCTACTTGATGGGGTGGAGCCC
CACCTTTTGGACGATTGGAAACACCATCCTCACCGGCCACCTGGACGAAG
AAAAAGGCGGGCAGGAGAAACAGACCGCCGGTATGGTTTTCTTCTACTTG
ATGGGGTGGAGCCCCACCTTTTGGACGATTGGAAACACCATCCTCACCGG
CCACCTGGACGAAGAAAAAGGCGGGCAGGAGAAACAGACCGCCGGTATGG
TTTTTTCGGAAGTACCAAAGGCGAAGCTAAGTCTGTCGGAGCGCGCGGCG
AGTATTCCTTCCACGCTCAAGAGTTCGGAAGTACCAAAGGCGAAGCTAAG
TCTGTCGGAGCGCGCGGCGAGTATTCCTTCCACGCTCAAGAGGATCGCTA
GCGGCCCCACCGCCCGAAAGATCTTGAGCCCGCCGATCATGGCCTGCCTA
GCGGGGCTGGTGATCGGCCTCAGCCCTCCCCTCCGGTGGCTGCTGATGAG
AGAGGGGGCCCCGCTGGGTCCGATGTGGGCCGCCTTCACCAACTTGGATC
GCTAGCGGCCCCACCGCCCGAAAGATCTTGAGCCCGCCGATCATGGCCTG
CCTAGCGGGGCTGGTGATCGGCCTCAGCCCTCCCCTCCGGTGGCTGCTGA
TGAGAGAGGGGGCCCCGCTGGGTCCGATGTGGGCCGCCTTCACCAACTTG
ACGGCAGCGTACACGCCATCTGGCGTTCTGGTTCTAGCGGGGAGCCTCGC
AAACTGCCCTCCTGGCAAGTGGTTCTCCAAGGACACGCGGAAGACAATTT
TGGCGGTGGGCATGGCGAGGTGGCTACTGCTGCCGCTGGTGACGTCAGAC
GGCAGCGTACACGCCATCTGGCGTTCTGGTTCTAGCGGGGAGCCTCGCAA
ACTGCCCTCCTGGCAAGTGGTTCTCCAAGGACACGCGGAAGACAATTTTG
GCGGTGGGCATGGCGAGGTGGCTACTGCTGCCGCTGGTGACGTCAGGGCT
GCTGTTCGGCGGGGTGAAATACGGGCTGGTGCCGCAGGATCCGATGCTCC
TGTTTGTGCTGCTCATGGAGTCCTGTATGCCGTCGGCACAGAACTCGGTC
ATCATGCTCCAGGGCTGCTGTTCGGCGGGGTGAAATACGGGCTGGTGCCG
CAGGATCCGATGCTCCTGTTTGTGCTGCTCATGGAGTCCTGTATGCCGTC
GGCACAGAACTCGGTCATCATGCTCCAG
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