mRNA_L-elsbetiae_contig12480.2020.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: A0A6H5JM24_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JM24_9PHAE) HSP 1 Score: 884 bits (2283), Expect = 8.940e-304 Identity = 438/553 (79.20%), Postives = 493/553 (89.15%), Query Frame = 3 Query: 1197 GVDHGDFPQTVLRGLEAFLP-KKAEHDVDTGAAVRGSRWKIPDDEIAKRRDLRKSRIFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTLVDGEPAWFGRSVIRSCCKLDYATAQNMIEGAILPDSASSTAPELWDPNRRPTEFKCRDVCEDVLLMHSLAKARRAKRFQSGALSLNTPKLSFRLDENGNPAEFAAYPIRDSNRLVEEYMLLANFLVAQQM-----------LDGADDRAFLRMHPPPPKKELEALKEVLARRGFELDVTSSASIQASLLRLRAQCSDEDIAQVITIMVTIPMQTAKYVASGAADSWLHYALNIPIYTHFTSPIRRYADVMVHRILTATLENTVDETYQVDAIAITADHCNDKKLAAKAAQERCDEVYLAVHVASNPLVEEAVVMSIGEKSFTVNVPRLGVTSRIYLDKIPDIAATFDDVNNTLHLTASSTVTHEWTEATIKVFAKVHVRCTVSDKEGPIRIELEFLRPK 2819 GV+HGDFP+TVLRGLEAFLP K AE +D GA RGSRWKIPD+EI+KRRDLR +RIFTIDPTGARDLDDALSITP+ADGTFEIGVHIADVTYFVRPNS+LDREARRRATTVYLVQQAIPMLPPLLCEELCSLNP VDRLT+SCIWRMN DGTLVD +PAWFGR+VIRSCCKLDY TAQ+MIEG ILPDSASST+PELWDPNRRPTEF C +VC+DVLLM+SLAK RRAKRF+SGALSLNTPKL+F+LD+NGNPA+F +YPIRDSNRLVEEYMLLANFLVAQQ+ ++GADDRAFLRMHPPP L ALKE LA G E+D+TSS SIQASLLRLR QC+DE+IAQV T+M TIPMQ+A+YVA+GA DSW HYALNIP+YTHFTSPIRRYADVMVHRILTATL+ TV+ TY+VDAI TA HCNDK+LAAKAAQER DEVYLAVHVASNPL EEAVV+S+GE+SFTVN+PRLGVTSR++LDKIPDI AT+D++ T+HLT SSTVTH+WT+A IK+F+KV V CTV++K GPI I L+FLRPK Sbjct: 333 GVNHGDFPRTVLRGLEAFLPPKNAEDGIDAGADTRGSRWKIPDEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTFSCIWRMNVDGTLVD-KPAWFGRTVIRSCCKLDYQTAQHMIEGTILPDSASSTSPELWDPNRRPTEFTCGEVCQDVLLMNSLAKRRRAKRFESGALSLNTPKLTFKLDDNGNPADFGSYPIRDSNRLVEEYMLLANFLVAQQVRPFSLENKNKIMEGADDRAFLRMHPPPIAPGLNALKETLAGCGIEIDITSSGSIQASLLRLRTQCNDEEIAQVCTMMATIPMQSAEYVAAGATDSWRHYALNIPVYTHFTSPIRRYADVMVHRILTATLDGTVESTYEVDAIEETAQHCNDKRLAAKAAQERSDEVYLAVHVASNPLQEEAVVISVGEQSFTVNIPRLGVTSRLFLDKIPDIMATYDELEGTIHLTPSSTVTHQWTDAKIKIFSKVQVLCTVAEKTGPIEILLQFLRPK 884
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: A0A7S2KY36_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KY36_9STRA) HSP 1 Score: 458 bits (1178), Expect = 6.000e-141 Identity = 264/579 (45.60%), Postives = 356/579 (61.49%), Query Frame = 3 Query: 1197 GVDHGDFPQTVLRGLEA------FLPKKAEHDVDTGAAVRGSRWKIPDDEIAKRRDLRKSRIFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTLVDG-----------EPAWFGRSVIRSCCKLDYATAQNMIEGAILPDSASSTAPELWDPNRRPTEFKCRD-VCEDVLLMHSLAKARRAKRFQSGALSLNTPKLSFRLDENGN-PAEFAAYPIRDSNRLVEEYMLLANFLVAQQMLDGADDRAFLRMHPPPPKKELEALKEVLARR-GFELDVTSSASIQASLLRLRAQCSDEDIAQVITIMVTIPMQTAKYVASG--AADSWLHYALNIPIYTHFTSPIRRYADVMVHRILTATLENTVDETYQVDA-IAITADHCNDKKLAAKAAQERCDEVYLAVHVASNPLVEE-AVVMSIGEKSFTVNVPRLGVTSRIYLDKIPDIAAT--FDDVNNTLHLTAS-------------STVTHEWTEATIKVFAKVHVRCTVSDKEGPIRIELEFLRP 2816 GVDHGDFP VLR ++ FL D GA + WK ++ RRD R RIFTIDPT A+DLDDAL +TP+ DG EIGVHIADV++F++ S +D+EA RRATTVYLV IPMLP LCE CSLN V+RL +S +WRMN DGTL + W+GR+VI+SC +LDYATAQN+I+G + + W +R+PT D V DV LMH +A ARR RF +GAL+LN KL+F+L+++G P A YPIRDSNRL+EEYMLLAN+ VAQ+++ A RA LR H PP + ++++ +V F++D TSS+++QASL RL +C DE + Q IT + PM+ A+Y+A+G A + W H+ALNIP YTHFTSPIRRY DV+VHR+L AT+++ VDE Q I A HCNDK++AAK AQER D V+L++++ NP+ V +S+GEK+FTV VP+LG + ++++ + D T + D H+ S W I VF K+ V CT + PI + ++ + P Sbjct: 216 GVDHGDFPAAVLRDVDKAVKSGRFLENNKSSD---GAVEKDMGWKPTEEMCRGRRDYRNHRIFTIDPTTAKDLDDALHVTPLPDGRVEIGVHIADVSHFIQSGSAVDQEALRRATTVYLVNDVIPMLPRPLCEIACSLNENVERLAFSVVWRMNLDGTLSKKGRKGKNKPKAEDEIWYGRTVIKSCARLDYATAQNIIDGKVATGEPQADE-TFWPKSRQPTGGHTIDQVAADVRLMHKVAMARRQLRFGNGALALNGIKLAFQLEDDGETPKLCAPYPIRDSNRLIEEYMLLANYFVAQRLITHAHGRALLRNHSPPIELGMQSVVDVSKEALNFDIDTTSSSTLQASLSRLSRECDDELVVQCITESLMTPMKPAEYIAAGELAEEDWHHFALNIPYYTHFTSPIRRYPDVIVHRLLQATIDDNVDEFPQNQGEIHSAAGHCNDKRMAAKKAQERSDRVFLSLYLKKNPITSTLGVCLSVGEKTFTVFVPKLGASIKVFVQEHEDCFETNAYTDDGGKRHIVISPKTDAVPGMQQSDDDTEPSWKSLNIGVFTKLEVACTCKARP-PIDVRVKVVGP 789
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: B8C1F9_THAPS (Ribonuclease (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1F9_THAPS) HSP 1 Score: 450 bits (1157), Expect = 2.180e-140 Identity = 247/502 (49.20%), Postives = 333/502 (66.33%), Query Frame = 3 Query: 1197 GVDHGDFPQTVLRGLEAFLPKKAEHDVDTGAAVRGSR-WKIPDDEIAKRRDLRKSRIFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTL---------VDGEPAWFGRSVIRSCCKLDYATAQNMIEGAILPDSASSTAPE-LWDPNRRPTE-FKCRDVCEDVLLMHSLAKARRAKRFQSGALSLNTPKLSFRLDENGN-PAEFAAYPIRDSNRLVEEYMLLANFLVAQQMLDGADDRAFLRMHPPPPKKELEALKEVLARR-GFELDVTSSASIQASLLRLRAQCSDEDIAQVITIMVTIPMQTAKYVASGAA--DSWLHYALNIPIYTHFTSPIRRYADVMVHRILTATLENTVDETYQVDA-IAITADHCNDKKLAAKAAQERCDEVYLAVHVASNPLVEE-AVVMSIGEKSFTVNVPRLGVTSRIYLDKIPDI 2648 GVDHG+FP VLR ++ + K + A G WK ++ RRD R R+FTIDPT ARDLDDAL +T + DG EIGVHIADV++FV+P+S +D EA RRATTVYLV + IPMLP LCE CSLN V+RL +S +WRMN DGTL + W+GR+VI+SC +LDYATAQN+I+ + + S E LW +R+PT +V DV LMH +A RR RF++GAL+LN KL+F+L+++G P A YPIRDSNRL+EEYMLLANFLVAQ+++ A RA LR H PP + ++ + +V F++D+TSS ++Q SL RL C DE + Q +T + PM+ A+Y+A+G + W H+ALNIP YTHFTSPIRRYADV+VHR+L ATL++ V E Q I AD CNDK++A+K AQER D V+L++++ +P+ V + IGEK+FTV VP LG+++R++L + D+ Sbjct: 95 GVDHGEFPPAVLREVDLAV-KSGRFFQSSSATSEGEMGWKPTEEMCRGRRDYRSHRVFTIDPTTARDLDDALHVTQLPDGRVEIGVHIADVSHFVQPSSAVDEEALRRATTVYLVDRVIPMLPRPLCEIACSLNENVERLAFSVVWRMNMDGTLSKKKGSAEKCKEDDIWYGRTVIKSCARLDYATAQNIIDNKVAAANGESEVDETLWPKSRQPTGGHTIAEVAADVRLMHQVAMKRRKLRFENGALALNGIKLTFQLEDDGETPKLCAPYPIRDSNRLIEEYMLLANFLVAQRLITHAKGRALLRQHSPPLEAGMQNVVDVSKESFDFDIDITSSKTLQESLSRLSRTCDDELVIQCVTESLMTPMRPAEYIAAGEVNDEDWQHFALNIPYYTHFTSPIRRYADVIVHRLLQATLDDAVSEFPQTQQEIHSAADQCNDKRMASKKAQERSDRVFLSLYLKEHPIASVLGVCLGIGEKTFTVFVPSLGMSTRVFLQEHEDV 595
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: B7FWN1_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWN1_PHATC) HSP 1 Score: 449 bits (1156), Expect = 2.440e-140 Identity = 250/495 (50.51%), Postives = 334/495 (67.47%), Query Frame = 3 Query: 1200 VDHGDFPQTVLRGLEAFLPKKAEHDVDTGAAVRGSRWKIPDDEIAKRRDLRKSRIFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTL--VDGEP-AWFGRSVIRSCCKLDYATAQNMIEGAILPDSASSTAPE-LWDPNRRPTE-FKCRDVCEDVLLMHSLAKARRAKRFQSGALSLNTPKLSFRLDENGN-PAEFAAYPIRDSNRLVEEYMLLANFLVAQQMLDGADDRAFLRMHPPPPKKELEALKEVL-ARRGFELDVTSSASIQASLLRLRAQCSDEDIAQVITIMVTIPMQTAKYVASGAAD--SWLHYALNIPIYTHFTSPIRRYADVMVHRILTATLENT-VDETYQVDAIAIT--ADHCNDKKLAAKAAQERCDEVYLAVHVASNPLVEE-AVVMSIGEKSFTVNVPRLGVTSRIYLDKIPD 2645 VDHGDF + VL+ +E + A T G WK + A RRD R +RIFTIDPT A+DLDDAL +T +ADG EIGVHIADV+YFVRP+S +D EA+ RATTVYLV + +PMLP LCE CSLN V+RL +SC+W MN DGT+ +G P W+GRSVI+SC +LDYATAQN+I+G + + E LW +RRPT V +DV LMH +A ARR RF +GAL+LN KL+F+LD +G P A YP+RDSNRLVEEYML+AN+LVA++++ RA LR HP P + L+ + V A GF +D++SS ++ ASL RL +CSD + Q +T M+ PMQ A Y A+G D +W H+ALNIP YTHFTSPIRRYADV+VHR+L AT++ +T+ +D A+ A HCN+K++A+K AQERCD V+L++ V + P+ + +V+S+G +FTV VP LG+ ++L++ D Sbjct: 46 VDHGDFDREVLQNVENAV---ASGVFVTSTGELG--WKPTPEMYAGRRDYRDARIFTIDPTTAKDLDDALHVTKLADGRVEIGVHIADVSYFVRPDSPVDTEAQYRATTVYLVDRTVPMLPRPLCEVACSLNENVERLAFSCVWTMNVDGTVRQKNGNPDVWYGRSVIKSCARLDYATAQNIIDGKVGRGESDKAIDEALWPESRRPTGGHTTAQVAQDVRLMHRVAMARRQLRFDNGALALNGIKLTFQLDTDGQTPLLAAPYPLRDSNRLVEEYMLMANYLVAERLITHTGRRAMLRRHPEPLEDGLDKVASVAKAGMGFNVDISSSQALHASLCRLGRECSDPLVLQCVTQMLMTPMQPADYFAAGTMDMAAWKHFALNIPYYTHFTSPIRRYADVIVHRLLQATIDGPEAVQTFPLDTDAVESIAAHCNEKRMASKKAQERCDRVFLSLFVKAKPMKSQLGIVLSVGVSTFTVFVPSLGIAVLLFLEEHKD 535
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: A0A7S4QYK5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYK5_9STRA) HSP 1 Score: 466 bits (1198), Expect = 2.700e-139 Identity = 264/569 (46.40%), Postives = 362/569 (63.62%), Query Frame = 3 Query: 1197 GVDHGDFPQTVLRGLEAFLPK---KAEHDVDTGAAVRGSRWKIPDDEIAKRRDLRKSRIFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTLVDGEPA------------WFGRSVIRSCCKLDYATAQNMIEGAILP-DSASSTAPELWDPNRRPTE-FKCRDVCEDVLLMHSLAKARRAKRFQSGALSLNTPKLSFRLDENGNPAEFAA-YPIRDSNRLVEEYMLLANFLVAQQMLDGADDRAFLRMHPPPPKKELEALKEVLARR-GFELDVTSSASIQASLLRLRAQCSDEDIAQVITIMVTIPMQTAKYVASGAADS--WLHYALNIPIYTHFTSPIRRYADVMVHRILTATLENTVDETYQVDAIAIT---ADHCNDKKLAAKAAQERCDEVYLAVHVASNPLVEE-AVVMSIGEKSFTVNVPRLGVTSRIYLDKIPD---IAATFDDVNNTLHL------TASSTVTHEWTEATIKVFAKVHVRCTVSDKEGPIRIEL 2801 GVDHGDF VLR ++ + + E A V W + + RRD R RIFTIDPT A+DLDDAL I P+ DG E+GVHIADV++FV P++ +D EA RRATTVYLV + IPMLP LCE CSLN V+RL +SC+W+MN DGT++ G+ + W+GR+VI+SC +LDYATAQN+IEG I + LW +RRPT DV DV LMH +A+ARRA RFQ+GAL+LN KL+F+L +G E YPIRDSNRLVEEYMLLAN+LVA++++ A DRA +R H PP +K LE + +V GF +D TSS S+Q SL R+ +C+DE + Q +T + +PM+ A+Y+ +G + W H+ALNIP YTHFTSPIRRYADVMVHR+L AT++ T+DE + A T +HCN+K++A+K AQER D V+L++ + + P+ VV+S+GEK+FT+ VP LG+++R ++D+ D I+ +D + + H ++ KVFAK+ V C +K PI +++ Sbjct: 642 GVDHGDFQPDVLRDVDEAVRSGRDRKESKQGATAEVCDLGWSPTPEMLKGRRDYRSERIFTIDPTTAKDLDDALHIKPLPDGRVEVGVHIADVSHFVAPDTAVDLEASRRATTVYLVDRTIPMLPRPLCEIACSLNENVERLAFSCVWKMNMDGTMMKGKSSQKGKQKKKDDEVWYGRTVIKSCARLDYATAQNIIEGKIASGEKVEDLDDNLWPQSRRPTGGHTIDDVAGDVRLMHRVAQARRALRFQNGALALNGVKLAFQLGADGEAPELCEPYPIRDSNRLVEEYMLLANYLVAERLISHAGDRAVIRNHNPPLQKGLEDVVDVARESVGFHIDATSSQSLQESLSRMGRECNDELVMQCVTELAMVPMRPAEYLTAGHVEEEEWSHFALNIPYYTHFTSPIRRYADVMVHRLLQATIDGTIDEDDTLRNEAETQSSCEHCNEKRMASKKAQERSDRVFLSLFLLAKPIKNVLGVVLSVGEKTFTIFVPSLGLSTRAFVDEHKDRFEISLQGEDGKRQIMMQRKGGQVVGQGTDHRTSQVCAKVFAKLKVSCYCKEK-APIDVKV 1209
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: A0A836CGT9_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT9_9STRA) HSP 1 Score: 454 bits (1168), Expect = 6.360e-136 Identity = 273/545 (50.09%), Postives = 341/545 (62.57%), Query Frame = 3 Query: 1170 DSCLFFSRTGVDHGDFPQTVLRGLEAFLPKKAEHDVDTGAAVRGSRWKIPDDEIAKRRDLRKSRIFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTLVDGEPAWFGRSVIRSCCKLDYATAQNMIEGAI-LPDS-ASSTAPELWDPNRRPTE-FKCRDVCEDVLLMHSLAKARRAKRFQS---GALSLNTPKLSFRLD--ENGNPA-------------EFAAYPIRDSNRLVEEYMLLANFLVAQ---QMLDGADDRA-------------------------FLRMHPPPPKKELEALKEVLARRGFELDVTSSASIQASLLRLRAQCSDEDIA-QVITIMVTIPMQTAKYVASGA--ADSWLHYALNIPIYTHFTSPIRRYADVMVHRILTATLENTVDETYQVDAIAITADHCNDKKLAAKAAQERCDEVYLAVHV--ASNPL-VEEAVVMSIGEKSFTVNVPRLGVTSRIYLDKI 2639 ++ S+ GV+HGDF ++L L+ L + D G G WKIP E A RRDLR +RIFTIDP ARDLDDAL +TP+ DGT EIGVHIADV++FV P ELDREA+RRATT+YLVQ+A+PMLPPLLCE LCSLNP VDRL +S IWRMN DGTLV+GE WFGR++IRSCC LDY T Q +IEG I LP A S + E W+ RRPT V +D+LLMH++A ARR RF + GALS+N KLSFRL + G P + AYPIRDSNRLVEEYMLLAN+LVA+ Q + GA D LR HPPP ++L + ++L G E D SSA++ ASL L C+ + QV+ +V PM+ A+Y+A+ + W H+ALNI YTHFTSPIRRYAD+MVHR+L A L+ + Y + + A HCN+K+ A+K AQER D V+L ++ AS P E AVVMS G FTV VP LGVT+R++L+ I Sbjct: 401 ETTALLSQNGVNHGDFSPSLLHALDQLLL----NGQDAGGVDGG--WKIPASEAAVRRDLRDARIFTIDPPTARDLDDALHVTPLPDGTVEIGVHIADVSHFVPPGGELDREAQRRATTIYLVQRALPMLPPLLCERLCSLNPGVDRLAFSAIWRMNRDGTLVEGEEPWFGRTIIRSCCTLDYGTVQKVIEGEIALPACRAGSLSEEQWESARRPTGGHSLYAVAQDILLMHTIAAARRQLRFAASGGGALSMNRLKLSFRLRAVDTGRPLRLDSGIVDDNLALDMTAYPIRDSNRLVEEYMLLANYLVARRLVQAMPGAGDSXXXXXXXXXXXXXXXXXXXAVGGPGPLLRRHPPPQPRQLRQVCDLLKLCGVEFDGASSAAMNASLQALAQSCAPGSLLPQVVDNLVAGPMKPAQYIAAAKYPPNVWRHFALNIGCYTHFTSPIRRYADLMVHRLLGAILDERPAQ-YTTEEVEEVARHCNNKRDASKKAQERSDVVFLCAYLKRASPPRGPERAVVMSYGATGFTVFVPALGVTARLFLEDI 938
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: A0A1E7FV50_9STRA (RNB-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FV50_9STRA) HSP 1 Score: 438 bits (1126), Expect = 1.180e-135 Identity = 243/554 (43.86%), Postives = 348/554 (62.82%), Query Frame = 3 Query: 1197 GVDHGDFPQTVLRGLEAFLPKKAEHDVDTGAAVRGSRWKIPDDEIAKRRDLRKSRIFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTLVDGEPAWFGRSVIRSCCKLDYATAQNMIEGAILPDSASSTAPELWDPNRRPTE-FKCRDVCEDVLLMHSLAKARRAKRFQSGALSLNTPKLSFRLDENGN-PAEFAAYPIRDSNRLVEEYMLLANFLVAQQMLDGADDRAFLRMHPPPPKKELEALKEVLARR-GFELDVTSSASIQASLLRLRAQCSDEDIAQVITIMVTIPMQTAKYVASG--AADSWLHYALNIPIYTHFTSPIRRYADVMVHRILTATLENTV---DETYQVDAIAITADHCNDKKLAAKAAQERCDEVYLAVHVASNPLVEE-AVVMSIGEKSFTVNVPRLGVTSRIYLDKIPDIAA--TFDDVNNTLHLTASSTVTH---EWTEATIKVFAKVHVRCTVSDKEGPIRIELEFLRP 2816 GVDHG+F VL + + ++ V T + WK D R+D R RIFTIDPT A+DLDDAL +T + +G EIGVHIADV++F+ P+ E+D EA+RR TTVYLV + +PMLP LCE CSLN V+RL +SC+WRMN DG+LV + W+GR+VI+SC +LDY+TAQN+IE + + +LW +RRPT V DV M+ +A+ARR RFQ+GA++L+ KL+F+LD++ P YPIRDSN+LVEEYMLLAN+LVAQ+++ RA LR H PP + L+ ++ GF +D+ SS S+Q SL RL +C D + Q IT ++ PM+ A Y+A+G + + W H+AL+IP YTHFTSPIRRYADV+VHR+L A++E + D +V I + CN+KK ++ AQER D V+LA+++ P ++ +VMS+G +FT+ +P +G+++ ++LD+ D F+ N + T H +W E IK F +V V C +D+ P+ ++LE P Sbjct: 65 GVDHGEFTTHVLEESQRVVAS-GQYSVGTESG-----WKPTSDMYRGRKDYRNQRIFTIDPTTAKDLDDALHVTDLGNGQVEIGVHIADVSFFIPPDCEIDIEAQRRCTTVYLVDRTVPMLPRPLCEVACSLNENVERLAFSCVWRMNRDGSLVKDQEVWYGRTVIKSCARLDYSTAQNIIENKVAYPGENEIDEKLWPISRRPTGGHTTSQVANDVRFMNEIAQARRKLRFQNGAIALSAVKLTFKLDDDRETPLLCEPYPIRDSNKLVEEYMLLANYLVAQRLITHTGPRACLRNHEPPDPEGLQQAADLAMEAIGFNIDIESSESLQRSLNRLGRECQDPILLQCITELLKTPMKPANYIAAGEISDEGWAHFALHIPYYTHFTSPIRRYADVIVHRLLQASIEGSEAVEDFPMEVKEIGAICNTCNEKKDGSRKAQERSDAVFLALYLRRFPKKKQLGIVMSVGNTAFTLFLPAMGISAVVFLDEHKDWIEYKAFEVPNMGRRINLKRTQRHKGEQWNELLIKNFVRVWVSCGCTDR-APLNVKLELEGP 611
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: A0A7S4QW54_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QW54_9STRA) HSP 1 Score: 432 bits (1111), Expect = 8.780e-135 Identity = 241/511 (47.16%), Postives = 334/511 (65.36%), Query Frame = 3 Query: 1362 IFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTLVDGEPA------------WFGRSVIRSCCKLDYATAQNMIEGAILP-DSASSTAPELWDPNRRPTE-FKCRDVCEDVLLMHSLAKARRAKRFQSGALSLNTPKLSFRLDENGNPAEFAA-YPIRDSNRLVEEYMLLANFLVAQQMLDGADDRAFLRMHPPPPKKELEALKEVLARR-GFELDVTSSASIQASLLRLRAQCSDEDIAQVITIMVTIPMQTAKYVASGAADS--WLHYALNIPIYTHFTSPIRRYADVMVHRILTATLENTVDETYQVDAIAIT---ADHCNDKKLAAKAAQERCDEVYLAVHVASNPLVEE-AVVMSIGEKSFTVNVPRLGVTSRIYLDKIPD---IAATFDDVNNTLHL------TASSTVTHEWTEATIKVFAKVHVRCTVSDKEGPIRIEL 2801 I + PT A+DLDDAL I P+ DG E+GVHIADV++FV P++ +D EA RRATTVYLV + IPMLP LCE CSLN V+RL +SC+W+MN DGT++ G+ + W+GR+VI+SC +LDYATAQN+IEG I + LW +RRPT DV DV LMH +A+ARRA RFQ+GAL+LN KL+F+L +G E YPIRDSNRLVEEYMLLAN+LVA++++ A DRA +R H PP +K LE + +V GF +D TSS S+Q SL R+ +C+DE + Q +T + +PM+ A+Y+ +G + W H+ALNIP YTHFTSPIRRYADVMVHR+L AT++ T+DE + A T +HCN+K++A+K AQER D V+L++ + + P+ VV+S+GEK+FT+ VP LG+++R ++D+ D I+ +D + + H ++ KVFAK+ V C +K PI +++ Sbjct: 4 IADVSPTTAKDLDDALHIKPLPDGRVEVGVHIADVSHFVAPDTAVDLEASRRATTVYLVDRTIPMLPRPLCEIACSLNENVERLAFSCVWKMNMDGTMMKGKSSQKGKQKKKDDEVWYGRTVIKSCARLDYATAQNIIEGKIASGEKVEDLDDNLWPQSRRPTGGHTIDDVAGDVRLMHRVAQARRALRFQNGALALNGVKLAFQLGADGEAPELCEPYPIRDSNRLVEEYMLLANYLVAERLISHAGDRAVIRNHNPPLQKGLEDVVDVARESVGFHIDATSSQSLQESLSRMGRECNDELVMQCVTELAMVPMRPAEYLTAGHVEEEEWSHFALNIPYYTHFTSPIRRYADVMVHRLLQATIDGTIDEDDTLRNEAETQSSCEHCNEKRMASKKAQERSDRVFLSLFLLAKPIKNVLGVVLSVGEKTFTIFVPSLGLSTRAFVDEHKDRFEISLQGEDGKRQIMMQRKGGQVVGQGTDHRTSQVCAKVFAKLKVSCYCKEK-APIDVKV 513
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: A0A448YWE1_9STRA (RNB domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YWE1_9STRA) HSP 1 Score: 443 bits (1139), Expect = 3.880e-134 Identity = 256/563 (45.47%), Postives = 351/563 (62.34%), Query Frame = 3 Query: 1197 GVDHGDFPQTVLRGLEAFLPKKAEHDVDTGAAVRGSRWKIPDDEIAKRRDLRKSRIFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTLVDGEPAWFGRSVIRSCCKLDYATAQNMIEGAILPDSASSTAPELWDPNRRPTE-FKCRDVCEDVLLMHSLAKARRAKRFQSGALSLNTPKLSFRLDENGN-PAEFAAYPIRDSNRLVEEYMLLANFLVAQQMLDGADDRAFLRMHPPPPKKELE-ALKEVLARRGFELDVTSSASIQASLLRLRAQCSDEDIAQVITIMVTIPMQTAKYVASGAADS--WLHYALNIPIYTHFTSPIRRYADVMVHRILTATL--ENTVDE-TYQVDAIAITADHCNDKKLAAKAAQERCDEVYLAVHVASNPLVEE-AVVMSIGEKSFTVNVPRLGVTSRIYLDKIPDI--AATFDDVNNTLHLTASSTVTHE---WTEATIKVFAKVHVRCTVSDKEGPIRIELEFLRPK*WSRWDID 2843 GVDHG+FP VL + + A G S W+ +D RRD R RIFTIDPT A+DLDDAL IT + +G EIGVHIADV++FV P+ +D EA+RR TTVYLV + IPMLP LCE CSLN V+RL +SC+WRMN DG+LV G+ W+GR+VI+SC +LDY+TAQN+IE + + ELW +RRPT V DV LM+ +A+ARR RF++GA++L+ KL+F+LD++ P Y IRDSN+LVEEYMLLANFLVAQ+++ RA LR H PP + LE A + GF +D+ SS ++Q SL RL +C D + + IT ++ PM+ A Y+A+G W H+AL+IP YTHFTSPIRRYADV+VHR+L A++ E+ V++ +V I+ CN+KK ++ AQER D V+LA+++ P + AVV SIG K+FTV +P LG+++ +YLD+ A ++D + T TH+ W E +K F ++ V C SDK P+ + L+ P W+ D Sbjct: 339 GVDHGEFPSHVLEESQTVV---ASGQYSNGTE---SGWRPTEDMYEGRRDYRNQRIFTIDPTTAKDLDDALHITDLGNGQIEIGVHIADVSFFVTPDCAIDVEAQRRCTTVYLVDRVIPMLPRPLCEVACSLNENVERLAFSCVWRMNRDGSLVKGQDVWYGRTVIKSCARLDYSTAQNIIENKVAYPGENEIDEELWPVSRRPTGGHTIGQVAADVRLMNEIAQARRRLRFRNGAVALDAVKLTFQLDDDRETPLLCEPYKIRDSNKLVEEYMLLANFLVAQRLITNTGPRACLRNHEPPDYEGLEKAAALAMEAIGFRIDIESSEAVQKSLNRLSQECQDPILLKCITELLKNPMKPATYIAAGTLSQPEWAHFALHIPYYTHFTSPIRRYADVIVHRLLQASIDGEDAVEDFPMEVKEISAICGTCNEKKEGSRKAQERSDAVFLALYLRKFPKKRQLAVVTSIGMKAFTVFLPHLGISAMVYLDEHKHWIEAEAYEDPKFGRRIKLKRTQTHKGERWKELLVKNFLRLRVTCGCSDKP-PLNVNLKLEGP-----WEGD 889
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Match: A0A7S3Q719_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q719_9STRA) HSP 1 Score: 436 bits (1120), Expect = 1.240e-129 Identity = 257/569 (45.17%), Postives = 350/569 (61.51%), Query Frame = 3 Query: 1200 VDHGDFPQTVLRGLEAFLP--KKAEHDVDTGAAVRGSRWKIPDDEIAKRRDLRKSRIFTIDPTGARDLDDALSITPMADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPMVDRLTYSCIWRMNGDGTLVDGEP--------AWFGRSVIRSCCKLDYATAQNMIEGAILPDSASSTAPE-LWDPNRRPTEFKCRD-VCEDVLLMHSLAKARRAKRFQSGALSLNTPKLSFRLDENGN-PAEFAAYPIRDSNRLVEEYMLLANFLVAQQMLDGADDRAFLRMHPPPPKKELEALKEVLARRGFELDVTSSASIQASLLRLRAQCSDEDIAQVITIMVTIPMQTAKYVASGA--ADSWLHYALNIPIYTHFTSPIRRYADVMVHRILTATL---ENTVDETYQV--DAIAITADHCNDKKLAAKAAQERCDEVYLAVHVASNPLVEE-AVVMSIGEKSFTVNVPRLGVTSRIYLDKIPDIAATFDD--VNNT---------LHLTASSTVTHEWTEATIKVFAKVHVRCTVSDKEGPIRIELEFL 2810 VDHG+F +VL+ +E + + + + + W + RRD R RIFTIDPT A+DLDDAL I P++DG EIGVHIADV++F+ S +D+EA RR TTVYLV + IPMLP LCE CSLN V+RL +SC+W MN DGT+ W+GR+VI+SC +LDYATAQN+I+G + E W +R PT D V DV LMHS+A ARR RF++GAL+LN KL+F++ E+G PA A YPIRDSNRL+EEYML+AN+LVAQ+++ A A LR H PP + +E + + +GFE+D TSS S+Q SL R+ +C+D Q IT + PM+ A+Y+A+G A+ W H+ALNIP YTHFTSPIRRY DV+VHR+L ATL E D + + I HCNDK++ +K AQER D ++L++ + SNP+ VV+SIGEK+FTV VP +G++ +YLDK D TF+ +NN + L SS + IK+F+K+ + C + E PI + L+ + Sbjct: 502 VDHGEFDASVLQDVENSVRSGRLGVDETSSESTAEDLGWAPTPEMYEGRRDYRNERIFTIDPTTAKDLDDALHIKPLSDGRVEIGVHIADVSHFLAHGSNVDQEASRRTTTVYLVDRVIPMLPRPLCEIACSLNENVERLAFSCVWIMNRDGTMAQKRSKSGSKENDVWYGRTVIKSCARLDYATAQNIIDGKVAHGEKVENIDESFWPKSRLPTAPHTIDGVAHDVRLMHSVAMARRKLRFENGALALNGIKLTFQMAEDGETPALCAPYPIRDSNRLIEEYMLMANYLVAQRLITHAGGLALLRQHQPPLELGMEKVIGMAKEKGFEIDGTSSKSLQESLSRMARECNDTLTMQCITELFMAPMKPAEYIAAGGFDAEDWSHFALNIPYYTHFTSPIRRYPDVLVHRLLQATLGGPEAVSDYATKQSQEEIQTICTHCNDKRMKSKKAQERSDRIFLSIFLKSNPIASTLGVVVSIGEKAFTVFVPSIGISGLVYLDKHQD---TFNVRILNNEKSKNREMMLIPLDGSSPID-------IKIFSKISIGCYCKE-EPPIDVTLKVV 1059 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12480.2020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12480.2020.1 >prot_L-elsbetiae_contig12480.2020.1 ID=prot_L-elsbetiae_contig12480.2020.1|Name=mRNA_L-elsbetiae_contig12480.2020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=467bp MADGTFEIGVHIADVTYFVRPNSELDREARRRATTVYLVQQAIPMLPPLLback to top mRNA from alignment at L-elsbetiae_contig12480:39..5439+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12480.2020.1 ID=mRNA_L-elsbetiae_contig12480.2020.1|Name=mRNA_L-elsbetiae_contig12480.2020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5401bp|location=Sequence derived from alignment at L-elsbetiae_contig12480:39..5439+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12480:39..5439+ >mRNA_L-elsbetiae_contig12480.2020.1 ID=mRNA_L-elsbetiae_contig12480.2020.1|Name=mRNA_L-elsbetiae_contig12480.2020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2802bp|location=Sequence derived from alignment at L-elsbetiae_contig12480:39..5439+ (Laminarionema elsbetiae ELsaHSoW15)back to top |