mRNA_L-elsbetiae_contig1247.2011.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: D7FLS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS7_ECTSI) HSP 1 Score: 216 bits (550), Expect = 2.550e-65 Identity = 123/133 (92.48%), Postives = 129/133 (96.99%), Query Frame = 1 Query: 1 MAQQGRSPEVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEARKIMQGAA 399 MAQ GRSPEVDAELKKLQ VQ+ ELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVL+KQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEA++GDEIMR+Q GMKERAAEEARKIM+GAA Sbjct: 1 MAQPGRSPEVDAELKKLQGVQS-ELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEAAIGDEIMRMQGGMKERAAEEARKIMEGAA 132
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: A0A7S2Y415_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y415_9STRA) HSP 1 Score: 129 bits (323), Expect = 5.130e-32 Identity = 70/122 (57.38%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 25 EVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEARKIMQ 390 EV+AE++K + + NAE+Q L R + YQQANENGMVKQELDLL+ PV+K++GPVLMKQDL+EA+ NVAKRL+LI+REM ++ E KQK++A LG++IM++Q M+ RA E A+K Q Sbjct: 7 EVEAEVEKYKAL-NAEIQELMEKRQKTYQQANENGMVKQELDLLDSTTPVYKMIGPVLMKQDLDEARDNVAKRLDLIQREMKRIEGTLEGKQKQQAELGEKIMKMQQAMQARAVEAAKKAYQ 127
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: A0A835ZF83_9STRA (Prefoldin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF83_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.390e-29 Identity = 71/123 (57.72%), Postives = 92/123 (74.80%), Query Frame = 1 Query: 28 VDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEARKIMQGA 396 VD ELK+ Q +Q+ EL + R+Q YQQANENGMVKQEL+LL+ VFK++ PVL+KQDL+EAK NVAKR+E I+ EMAKV K E K KE+A +GD I ++Q M+ RAAEEARK ++ + Sbjct: 11 VDVELKRYQELQD-ELTQFSQVRNQLYQQANENGMVKQELELLKPGTKVFKMITPVLLKQDLDEAKVNVAKRIEFIQGEMAKVEKQIEAKTKEQAEIGDNIAKMQGEMQARAAEEARKAVEAS 132
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: F0WAV7_9STRA (Uncharacterized protein AlNc14C48G3819 n=2 Tax=Albugo TaxID=65356 RepID=F0WAV7_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.400e-24 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 1 Query: 19 SPEVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEAR 378 S VD E K V+Q ELQ L A + ++ QQANEN MVKQELDL+ DE V+K+VGPVL+KQDLEEAK NV KR+E I+ E+ KV+K E+K+ E + EI +Q M+++AAE +R Sbjct: 2 SKRVDVETAKYHVLQE-ELQVLVAQQQKYRQQANENNMVKQELDLVHDETKVYKMVGPVLLKQDLEEAKTNVNKRIEFIKHELYKVTKKIEDKENEAIEVRKEIATIQMEMQKQAAEASR 120
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: A0A3F2RF90_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RF90_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.110e-24 Identity = 63/118 (53.39%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 25 EVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEAR 378 +V+AE+ + + +Q+ E+Q LAA R + QQANEN MVK+ELDLL++EA VFKLVGPVL+KQD++EAK NV KRLE I E+ KV+ E K+KE + I +Q M++RAAE A+ Sbjct: 7 QVEAEMTRYRALQD-EVQVLAAQRQTYAQQANENDMVKKELDLLDEEAKVFKLVGPVLLKQDVDEAKTNVNKRLEFINNELGKVNTKIEAKEKEAMGIRTNISNMQMEMQKRAAEAAK 123
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: H3GRS3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRS3_PHYRM) HSP 1 Score: 106 bits (265), Expect = 7.050e-24 Identity = 62/118 (52.54%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 25 EVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEAR 378 +V+AE+ + + +Q+ E+Q LA+ R + QQANENGMVK EL+LL+DEA V+KLVGPVL+KQD +EAK NV KRLE I E++KV+ E K+KE + I +Q M++RAAE A+ Sbjct: 7 QVEAEMTRYRALQD-EVQVLASQRQTYAQQANENGMVKTELELLDDEARVYKLVGPVLLKQDADEAKTNVNKRLEFINNELSKVNTKIENKEKEAIGIRSNISSMQMDMQKRAAEAAK 123
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: D0NCV8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NCV8_PHYIT) HSP 1 Score: 106 bits (264), Expect = 9.710e-24 Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 1 Query: 25 EVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEAR 378 +VD E+ + + +Q+ E+Q LA R + QQANEN MVK+ELDLL+DEA V+KLVGPVL+KQD +EAK NV KRLE I E+ KV+ E K+KE + + I +Q M++RAAE A+ Sbjct: 7 QVDTEMARYRALQD-EVQVLATQRQTYAQQANENDMVKKELDLLDDEAKVYKLVGPVLLKQDADEAKSNVNKRLEFINNELNKVNSKIEAKEKEAVGIRNNISNMQMEMQKRAAEAAK 123
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: A0A5D6XI54_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI54_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.000e-23 Identity = 63/118 (53.39%), Postives = 84/118 (71.19%), Query Frame = 1 Query: 25 EVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEAR 378 +VDAE+ + +V+Q E+Q LA R Q+ QQANEN MVK+ELDLL D+A VFKL+GPVL+KQD++EAK NV KRLE I E+ KV+ + K+K+ + I LQ M++RA E AR Sbjct: 8 QVDAEMARYRVLQE-EVQVLATQRQQYAQQANENTMVKKELDLLSDDAKVFKLIGPVLLKQDVDEAKANVNKRLEFINNELQKVNAKIDLKEKDAVEIRSTIASLQMEMQKRATEAAR 124
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: G5AJ95_PHYSP (Uncharacterized protein n=11 Tax=Peronosporaceae TaxID=4777 RepID=G5AJ95_PHYSP) HSP 1 Score: 105 bits (261), Expect = 2.540e-23 Identity = 61/118 (51.69%), Postives = 85/118 (72.03%), Query Frame = 1 Query: 25 EVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEAR 378 +V+AE+ + + +Q+ E+Q LA R + QQANEN MVK+ELDLL+DE V+KLVGPVL+KQD++EAK NV KRLE I E++KV+ E K+KE + I +Q M++RAAE A+ Sbjct: 7 QVEAEMTRYRALQD-EVQVLATQRQTYAQQANENDMVKKELDLLDDETKVYKLVGPVLLKQDVDEAKTNVNKRLEFINNELSKVNSKIEAKEKEAIGIRTNISNMQMEMQKRAAEAAK 123
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Match: A0A8K1CR62_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR62_PYTOL) HSP 1 Score: 103 bits (258), Expect = 6.100e-23 Identity = 60/121 (49.59%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 25 EVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLMKQDLEEAKQNVAKRLELIEREMAKVSKAFEEKQKEEASLGDEIMRLQSGMKERAAEEARKIM 387 +VDAE+ + + +Q E+Q LA R Q+ QQA+EN MV+QELDLL D+A VFKL+GPVL+KQD EAK NV KRLE I E+ K +K E+K+K+ + I ++Q M+++AA AR ++ Sbjct: 6 QVDAEMARYRTLQE-EVQVLATQRQQYAQQASENTMVQQELDLLGDDAKVFKLIGPVLLKQDASEAKTNVKKRLEFINNELEKANKKIEQKEKDAVEIRKNIAQMQMEMQKQAAAAARSVV 125 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1247.2011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1247.2011.1 >prot_L-elsbetiae_contig1247.2011.1 ID=prot_L-elsbetiae_contig1247.2011.1|Name=mRNA_L-elsbetiae_contig1247.2011.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp MAQQGRSPEVDAELKKLQVVQNAELQALAASRSQFYQQANENGMVKQELDback to top mRNA from alignment at L-elsbetiae_contig1247:11231..15602- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1247.2011.1 ID=mRNA_L-elsbetiae_contig1247.2011.1|Name=mRNA_L-elsbetiae_contig1247.2011.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4372bp|location=Sequence derived from alignment at L-elsbetiae_contig1247:11231..15602- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1247:11231..15602- >mRNA_L-elsbetiae_contig1247.2011.1 ID=mRNA_L-elsbetiae_contig1247.2011.1|Name=mRNA_L-elsbetiae_contig1247.2011.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig1247:11231..15602- (Laminarionema elsbetiae ELsaHSoW15)back to top |