mRNA_L-elsbetiae_contig1243.1984.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1243.1984.1
Unique NamemRNA_L-elsbetiae_contig1243.1984.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: A0A6H5KDE6_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDE6_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 9.760e-147
Identity = 214/296 (72.30%), Postives = 246/296 (83.11%), Query Frame = 2
Query:  596 GGFVSSALEFPTGTWLSESIEAILAPSTKLKYIVYTHSHWDHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNR-DPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQKIHAHERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFATVSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAGSRGRNWLAELGGVDLTLRSQ 1480
            G FVSSA EFPT TWLSESIEAILAP TKLKYI+YTHSHWDH+G AGLVY+HFA+D+P II SKRIRA LK RD+R DPT++ G            NNRGVPIPEKL+ ADYRELQVG LRFE+QK+HAHERGDL VFLDK +P NAAEGI +S+  VVD IFPGW+PF SVA + ++G YY+AMD IL+YD DVLV GHLSRMGTKADVQLNKDFY DVLEGA+ G  TVS AD+++GTGV DP+NPNAGN WLL +ELI+RN DVC AYVLD+ SRGR+WLAE+GG+D+TLRSQ
Sbjct:   20 GSFVSSASEFPTATWLSESIEAILAPGTKLKYILYTHSHWDHIGTAGLVYEHFAEDNPTIITSKRIRAKLKARDDRGDPTSIHG------------NNRGVPIPEKLDEADYRELQVGGLRFEVQKLHAHERGDLVVFLDKNLPANAAEGIDTSVFFVVDVIFPGWVPFFSVAASSEIGGYYDAMDEILSYDMDVLVGGHLSRMGTKADVQLNKDFYDDVLEGARTGVTTVSVADVISGTGVFDPSNPNAGNLWLLNNELIDRNVDVCEAYVLDSVSRGRDWLAEMGGLDVTLRSQ 303          
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: D8LEX6_ECTSI (Beta-lactamase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX6_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 5.290e-120
Identity = 178/255 (69.80%), Postives = 206/255 (80.78%), Query Frame = 2
Query:  716 DHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNRDPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQKIHAHERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFATVSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAGSRGRNWLAELGGVDLTLRSQ 1480
            DH+G AG V DHFA ++P IIASKRIR  LK +D+RDPT+VFG            NNRGVPIPEKLEAA+YREL VG LRFELQKIHAH+ GDLF+FLDK++PENAA GI +S+ MVVDT+FPGWIP     +  DV SYYEAMD+IL YDFDVL+AGHL+RMGTKADVQLN+D +AD+LEGA  GFA VS AD+ AGT VSDP NPNAGN WLLF+ELI R TD+C AYVLD+ SRGR+WLAE+ GVDLTLR+Q
Sbjct:    5 DHIGGAGFVSDHFAHNNPTIIASKRIRHDLKSKDDRDPTSVFG------------NNRGVPIPEKLEAAEYRELSVGGLRFELQKIHAHQPGDLFIFLDKSVPENAAAGIDTSVFMVVDTVFPGWIPLFPTNLNPDVASYYEAMDVILGYDFDVLMAGHLTRMGTKADVQLNRDLFADILEGATAGFAAVSQADVGAGTAVSDPTNPNAGNVWLLFTELIARQTDMCAAYVLDSASRGRDWLAEVAGVDLTLRTQ 247          
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: D8LKQ6_ECTSI (Beta-lactamase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ6_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 2.260e-98
Identity = 158/267 (59.18%), Postives = 189/267 (70.79%), Query Frame = 2
Query:  716 DHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNR-DPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQKIHAHERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFATVSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAGSRGRNWLAELGGVDLTLRSQCWAVISYLRVG 1513
            DH+G AGLVY+HFA D+P II SKRIRA +K RD+R DPT++ G            NNRGVPIP+KL+ ADYRELQVG LRFE++K+HAHERGDL VFLDK +PENAAEG                                        YD DVLV GHLSRMGTKADVQLNKDFY DVL+GA+ G  TVS AD+++GTGV DP+NPNAGN WL+ +ELI+R+ DVC AYVLD+ SRGR+WLAE+GG+D+TLRSQCWAV +Y+R+G
Sbjct:   24 DHIGTAGLVYEHFAADNPTIITSKRIRAKIKARDDRGDPTSIHG------------NNRGVPIPQKLDEADYRELQVGGLRFEVRKLHAHERGDLVVFLDKNLPENAAEG----------------------------------------YDMDVLVGGHLSRMGTKADVQLNKDFYDDVLKGARTGVTTVSVADVISGTGVFDPSNPNAGNLWLINNELIDRHVDVCEAYVLDSVSRGRDWLAEMGGLDVTLRSQCWAVAAYIRIG 238          
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: D7FY02_ECTSI (Beta-lactamase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY02_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 3.780e-75
Identity = 134/241 (55.60%), Postives = 162/241 (67.22%), Query Frame = 2
Query:  443 LYRQISGSPMFDETGERRNAGGAAIYVLTSGGYWCMLAESNGEAALFDAPEGGFVSSALE-FPTGTWLSESIEAILAPSTKLKYIVYTHSHWDHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNRDPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRE--LQVGNLRFELQKIHAHERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDII 1156
            +Y+QI G+   + T    + G  A+Y LT G Y+CMLAES GEA LFDAPE  F SS  E FP GTWL+ SI+A+L+  TKLKYIVYTH HWDHMGAAGLV ++FA D+P  IAS+R R A+K RD +DP TVFG            NNRGVP+PE      Y+E  L+VG LRF L+K +AH+ GDL V LDK  P+NA EGI S+I MV DT+F GW PF SV I  DV  + EA+D I
Sbjct:    1 MYKQIGGN---NATATGSSEGTTAVYALTEGAYFCMLAESGGEAVLFDAPEASFTSSFGEKFPNGTWLTASIDALLSEGTKLKYIVYTHRHWDHMGAAGLVVEYFAADNPTAIASRRTRLAVKKRDTKDPNTVFG------------NNRGVPVPEW-----YQEEVLEVGGLRFTLEKANAHQGGDLMVTLDKHDPQNAGEGIDSTIFMVTDTVFAGWAPFYSVNIVQDVSDFLEALDEI 221          
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: A0A654LUP5_9ARCH (Carbapenem-hydrolyzing beta-lactamase BlaB-1 n=1 Tax=Candidatus Nitrosocosmicus oleophilus TaxID=1353260 RepID=A0A654LUP5_9ARCH)

HSP 1 Score: 145 bits (366), Expect = 1.180e-34
Identity = 105/335 (31.34%), Postives = 154/335 (45.97%), Query Frame = 2
Query:  515 IYVLTSGGYWCMLAESNGEAALFDAPEGGFVSSALEFPTGTWLSES-IEAILAPSTK-LKYIVYTHSHWDHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNRDPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQ-KIHAHERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFATVSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAGSRGRNWLAELGGVDLTLRSQCWAVISYLRV 1510
            +Y +T G Y  M   S+      DAP                L E+ I+AI   + K +KY++Y+HSH DH+GAAG +Y     D+  I+A +     LK                      + N+   PIP      +Y  L +GN   EL  K   HE G+ +++                 LM VD IFPGW+PF  +AIT +V  + +A DI+ +YDFD LV GHL+R+GT  DV++ K+F  D++  +K   + ++  D V+  G+++P        WL FSE  +  TD C   +L        W   LGG +    S CW +    RV
Sbjct:   96 LYWVTDGVYNTMFLVSDDGVIAVDAPPS--------------LDENYIKAIREVTDKPIKYVIYSHSHIDHIGAAGNIYP----DNVTIVAQEETAKLLK----------------------IANDSNRPIPTVTFKDNYN-LTLGNQTLELDYKGVNHEPGNTYIYAPN-----------QKTLMFVDVIFPGWVPFKDLAITKNVSGFVQAHDIVSSYDFDTLVGGHLTRLGTMEDVKIQKEFITDLINASKTANSKINFMDFVSKYGLTNP--------WLTFSEYADAVTDECTNTML------AKWKDRLGGAEQFTESHCWIMTESQRV 364          
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: A0A158FSD1_9BURK (Beta-lactamase domain-containing protein n=2 Tax=Caballeronia choica TaxID=326476 RepID=A0A158FSD1_9BURK)

HSP 1 Score: 139 bits (351), Expect = 6.710e-33
Identity = 102/337 (30.27%), Postives = 163/337 (48.37%), Query Frame = 2
Query:  518 YVLTSGGYWCMLAESNGEAALFDAPEGGFVSSALEFPTGTWLSESIEAILAPSTK-LKYIVYTHSHWDHMGAAGLVYDHFAQDSPVIIASKRIRAALK---DRDNRDPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQ-KIHAHERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFATVSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAG-SRGRNWLAELGGVDLTLRSQCWAVISYLRV 1510
            + + +GGY  +   +     + DAP              +  S  ++AI + +T+ + +++Y+HSH+DH+GAA +       D+ V IA +     L+   DR    PTT F                         A +Y  L+VGN R EL+ + + H+ G++F++  +             +LM+VD +FPGW+PF ++A+ +DV  +  A D++LAYDFDV+V GHL+R GT+ADV+  +++   +   +K   A+VS  DI A TG          N W L    ++   D     +L    S GR W   LGG D+  R   +A+I  LRV
Sbjct:   58 FWINAGGYDTLFLSTGQGVIVIDAPP-------------SMRSVLLDAIRSKTTEPITHVIYSHSHFDHIGAADIY-----PDAAVRIAQQSTTDKLRSYQDRRRPCPTTTF-------------------------AEEYC-LEVGNKRLELRYRGNIHQPGNIFIYEPR-----------QKVLMLVDVVFPGWVPFRNLAVANDVHEFIGAHDLLLAYDFDVMVCGHLTRYGTRADVETQREYVHQLRSASKAALASVSIEDIGARTGFD--------NIWALMDGYLDDMVDRVTNELLTTPTSDGRLWTDRLGGADVWTRHHAFAMIHALRV 331          
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: A0A4Y8IDD4_9BACT (MBL fold metallo-hydrolase n=1 Tax=Candidatus Marinimicrobia bacterium MT.SAG.4 TaxID=2552981 RepID=A0A4Y8IDD4_9BACT)

HSP 1 Score: 135 bits (340), Expect = 4.700e-32
Identity = 92/293 (31.40%), Postives = 142/293 (48.46%), Query Frame = 2
Query:  641 LSESIEAILAPSTK--LKYIVYTHSHWDHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNRDPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQKIHA-HERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFATVSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAGSRGRNWLAELGGVDLTLRSQCWAVISYLRV 1510
            + + + A +A  T   + +++Y+HSH DH+ AA +    +  D+ V IA +     L  ++       FG +L             VP+P  +  +D   L+VGN + EL      H  G+++++  K             +LM +D IFPGW PF  +AIT +V  Y  A D +L +DF+ L++GHL+R+GT+ADV+  K++  D++  A     TV   D +A  G +  ANP     WLLF   +   TD+C        S    W   LGGVD+     CW +   LRV
Sbjct:   18 IGDKVLAAIAEVTDEAITHVIYSHSHGDHIAAASM----YPPDA-VYIAHEETAKRLSSQEGGSRVAPFGAFL---------GGSPVPVPT-VTFSDSYTLEVGNQKLELSYRGVNHIEGNIYIYAPK-----------QKVLMFIDVIFPGWTPFKYLAITENVPGYIAAHDEVLTFDFETLISGHLTRLGTRADVETQKEYINDLVGNAAHALQTV---DFMAVAGKTGWANP-----WLLFDTYLNEVTDMCT------DSTVAKWGDILGGVDIFTPGHCWKMAEMLRV 270          
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: A0A4Y8I4T9_9BACT (MBL fold metallo-hydrolase n=1 Tax=Candidatus Marinimicrobia bacterium MT.SAG.2 TaxID=2552983 RepID=A0A4Y8I4T9_9BACT)

HSP 1 Score: 137 bits (344), Expect = 1.090e-31
Identity = 99/335 (29.55%), Postives = 157/335 (46.87%), Query Frame = 2
Query:  515 IYVLTSGGYWCMLAESNGEAALFDAPEGGFVSSALEFPTGTWLSESIEAILAPSTK--LKYIVYTHSHWDHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNRDPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQ-KIHAHERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFATVSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAGSRGRNWLAELGGVDLTLRSQCWAVISYLRV 1510
            +Y +T G Y  M   +     + DAP           PT   + + + A +A  T   + +++Y+HSH DH+ AA +    +  D+ V IA +     L  ++       FG +L             VP+P  +  +D   L+VGN + EL  +   H  G+++++  K             +LM +D IFPGW PF  +AIT +V  Y  A D +L++DF++L++GHL+R+G +ADV+  K++  D++  A     TV   D +A  G +  ANP     WLLF   +    D+C        S    W  +LG VD+     CW +   LRV
Sbjct:   83 LYYVTEGMYHVMFLTTGEGVIVVDAP-----------PT---IGDKVLAAIAEVTDEAITHVIYSHSHADHIAAASM----YPPDA-VYIAHEETAKRLSSQEGGSRVAPFGAFL---------GGSPVPVPT-VTFSDSYTLEVGNQKLELSYRGENHIAGNIYIYAPK-----------QKVLMFIDVIFPGWTPFKYLAITENVPGYIAAHDEVLSFDFEILISGHLTRLGNRADVETQKEYMNDLVGNAAHALQTV---DFMAVAGKTGWANP-----WLLFDTYLNEVADMCT------DSTVVKWGDKLGAVDIFTWGHCWKMAEMLRV 363          
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: A0A838D836_9ARCH (MBL fold metallo-hydrolase n=2 Tax=Thaumarchaeota TaxID=651137 RepID=A0A838D836_9ARCH)

HSP 1 Score: 136 bits (342), Expect = 2.060e-31
Identity = 100/335 (29.85%), Postives = 154/335 (45.97%), Query Frame = 2
Query:  515 IYVLTSGGYWCMLAESNGEAALFDAPEGGFVSSALEFPTGTWLSES-IEAILAPSTK-LKYIVYTHSHWDHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNRDPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQ-KIHAHERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFATVSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAGSRGRNWLAELGGVDLTLRSQCWAVISYLRV 1510
            +Y +T G Y  M   ++      DAP                L E+ I+AI   + K ++Y+VY+HSH DH+GAAG ++ +    +  I++ +     LK                      + N+   PIP  +   D   L +GN   EL  K   HE G+++++                 LM+VD IFPGW+PF  +AIT +V  + +A DI+ +YDFD LV GHL+R+G   DV + K+F  D++  +K   + ++  D V+  G+++P        WL FSE  +  TD C   +L        W   LGG +    S CW +    RV
Sbjct:   96 LYWVTDGVYNTMFLVNDDGVIAVDAPPS--------------LGENYIKAIREVTDKPIRYVVYSHSHIDHIGAAGNIFPN----NITIVSQEETAKLLK----------------------IANDSNRPIPT-IAFKDNYNLTLGNQTLELDYKGVNHEPGNIYIYAPS-----------QKTLMLVDVIFPGWVPFKDLAITTNVPGFVQAHDIVSSYDFDTLVGGHLTRLGNVEDVNIQKEFITDLVNASKAANSKINFMDYVSKYGLTNP--------WLTFSEYSDAVTDECTNTML------AKWKDRLGGAEQFTESHCWTMTESQRV 364          
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Match: A0A3E0C2F1_9BURK (Glyoxylase-like metal-dependent hydrolase (Beta-lactamase superfamily II) n=2 Tax=Paraburkholderia sp. BL6669N2 TaxID=1938807 RepID=A0A3E0C2F1_9BURK)

HSP 1 Score: 133 bits (335), Expect = 9.740e-31
Identity = 99/335 (29.55%), Postives = 160/335 (47.76%), Query Frame = 2
Query:  515 IYVLTSGGYWCMLAESNGEAALFDAPEGGFVSSALEFPTGTWLSESIEAILAPSTKLKYIVYTHSHWDHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNRDPTTVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQKIHA--HERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGSYYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFATVSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAG-SRGRNWLAELGGVDLTLRSQCWAVISYLRV 1510
            I+ +++GGY  +   +     + DAP             G  +  +I A       +KY+VY+HSH+DH+GAA L       DS + IA            +     +  +Y D        ++R VP    +   D   L+VG  + EL + H   H+ G++F++        AA+ +    LM+VD IFPGW+PF ++A+ +DV  + +A + +LAYDFDV+V GHL+R GT+ADV+  +++  ++   +K   ATV   D+ + TG          N W L    +    ++    VL    S GR W   L G D+  +   +++I  LRV
Sbjct:   57 IFWISAGGYDTIFMPTGDGVIVVDAPPA----------LGPHMLNAIRA--KTEEPIKYVVYSHSHFDHIGAANLY-----PDSAIRIA------------HSSTADLLARYAD--------SHRPVP---NIVFKDEYVLEVGGRKLEL-RYHGNIHQPGNIFIY-------EAAQRV----LMLVDVIFPGWVPFRNLAVANDVHEFIKAHETVLAYDFDVMVCGHLTRPGTRADVEAQREYVQNLRAASKNALATVKIEDVGSRTGFD--------NLWALMDGYLNDMIEMATRTVLTVSTSDGRLWSERLAGADVWTKHHAFSMIQALRV 331          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1243.1984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDE6_9PHAE9.760e-14772.30Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
D8LEX6_ECTSI5.290e-12069.80Beta-lactamase domain protein n=1 Tax=Ectocarpus s... [more]
D8LKQ6_ECTSI2.260e-9859.18Beta-lactamase domain protein n=1 Tax=Ectocarpus s... [more]
D7FY02_ECTSI3.780e-7555.60Beta-lactamase domain protein n=1 Tax=Ectocarpus s... [more]
A0A654LUP5_9ARCH1.180e-3431.34Carbapenem-hydrolyzing beta-lactamase BlaB-1 n=1 T... [more]
A0A158FSD1_9BURK6.710e-3330.27Beta-lactamase domain-containing protein n=2 Tax=C... [more]
A0A4Y8IDD4_9BACT4.700e-3231.40MBL fold metallo-hydrolase n=1 Tax=Candidatus Mari... [more]
A0A4Y8I4T9_9BACT1.090e-3129.55MBL fold metallo-hydrolase n=1 Tax=Candidatus Mari... [more]
A0A838D836_9ARCH2.060e-3129.85MBL fold metallo-hydrolase n=2 Tax=Thaumarchaeota ... [more]
A0A3E0C2F1_9BURK9.740e-3129.55Glyoxylase-like metal-dependent hydrolase (Beta-la... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1243contigL-elsbetiae_contig1243:9539..16797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.2
Seed ortholog evalue4.3e-98
Seed eggNOG ortholog2880.D8LEX6
Hectar predicted targeting categorysignal peptide
EggNOG OGs2CJFE@1,2SA2M@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionBeta-lactamase-like
Ec32 orthologEc-07_004430.1
Exons11
Model size1999
Cds size1284
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815437.5036783-UTR-L-elsbetiae_contig1243:9538..100211622815437.5036783-UTR-L-elsbetiae_contig1243:9538..10021Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1243 9539..10021 -
1691682898.1494277-UTR-L-elsbetiae_contig1243:9538..100211691682898.1494277-UTR-L-elsbetiae_contig1243:9538..10021Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1243 9539..10021 -
1622815437.6376708-UTR-L-elsbetiae_contig1243:16565..167971622815437.6376708-UTR-L-elsbetiae_contig1243:16565..16797Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1243 16566..16797 -
1691682898.2731237-UTR-L-elsbetiae_contig1243:16565..167971691682898.2731237-UTR-L-elsbetiae_contig1243:16565..16797Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1243 16566..16797 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815437.5139387-CDS-L-elsbetiae_contig1243:10021..100571622815437.5139387-CDS-L-elsbetiae_contig1243:10021..10057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 10022..10057 -
1691682898.1589785-CDS-L-elsbetiae_contig1243:10021..100571691682898.1589785-CDS-L-elsbetiae_contig1243:10021..10057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 10022..10057 -
1622815437.5232615-CDS-L-elsbetiae_contig1243:10892..110191622815437.5232615-CDS-L-elsbetiae_contig1243:10892..11019Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 10893..11019 -
1691682898.1706028-CDS-L-elsbetiae_contig1243:10892..110191691682898.1706028-CDS-L-elsbetiae_contig1243:10892..11019Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 10893..11019 -
1622815437.5322053-CDS-L-elsbetiae_contig1243:12203..122971622815437.5322053-CDS-L-elsbetiae_contig1243:12203..12297Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 12204..12297 -
1691682898.1799185-CDS-L-elsbetiae_contig1243:12203..122971691682898.1799185-CDS-L-elsbetiae_contig1243:12203..12297Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 12204..12297 -
1622815437.542747-CDS-L-elsbetiae_contig1243:12796..128951622815437.542747-CDS-L-elsbetiae_contig1243:12796..12895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 12797..12895 -
1691682898.1894004-CDS-L-elsbetiae_contig1243:12796..128951691682898.1894004-CDS-L-elsbetiae_contig1243:12796..12895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 12797..12895 -
1622815437.552313-CDS-L-elsbetiae_contig1243:13159..132301622815437.552313-CDS-L-elsbetiae_contig1243:13159..13230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 13160..13230 -
1691682898.1984284-CDS-L-elsbetiae_contig1243:13159..132301691682898.1984284-CDS-L-elsbetiae_contig1243:13159..13230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 13160..13230 -
1622815437.5629003-CDS-L-elsbetiae_contig1243:13758..138071622815437.5629003-CDS-L-elsbetiae_contig1243:13758..13807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 13759..13807 -
1691682898.2073994-CDS-L-elsbetiae_contig1243:13758..138071691682898.2073994-CDS-L-elsbetiae_contig1243:13758..13807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 13759..13807 -
1622815437.5715904-CDS-L-elsbetiae_contig1243:14207..143691622815437.5715904-CDS-L-elsbetiae_contig1243:14207..14369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 14208..14369 -
1691682898.2184792-CDS-L-elsbetiae_contig1243:14207..143691691682898.2184792-CDS-L-elsbetiae_contig1243:14207..14369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 14208..14369 -
1622815437.5841553-CDS-L-elsbetiae_contig1243:14690..148531622815437.5841553-CDS-L-elsbetiae_contig1243:14690..14853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 14691..14853 -
1691682898.2276516-CDS-L-elsbetiae_contig1243:14690..148531691682898.2276516-CDS-L-elsbetiae_contig1243:14690..14853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 14691..14853 -
1622815437.5975435-CDS-L-elsbetiae_contig1243:15246..153651622815437.5975435-CDS-L-elsbetiae_contig1243:15246..15365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 15247..15365 -
1691682898.2368894-CDS-L-elsbetiae_contig1243:15246..153651691682898.2368894-CDS-L-elsbetiae_contig1243:15246..15365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 15247..15365 -
1622815437.6130583-CDS-L-elsbetiae_contig1243:15993..162101622815437.6130583-CDS-L-elsbetiae_contig1243:15993..16210Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 15994..16210 -
1691682898.247281-CDS-L-elsbetiae_contig1243:15993..162101691682898.247281-CDS-L-elsbetiae_contig1243:15993..16210Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 15994..16210 -
1622815437.6266181-CDS-L-elsbetiae_contig1243:16418..165651622815437.6266181-CDS-L-elsbetiae_contig1243:16418..16565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 16419..16565 -
1691682898.262444-CDS-L-elsbetiae_contig1243:16418..165651691682898.262444-CDS-L-elsbetiae_contig1243:16418..16565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1243 16419..16565 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1243.1984.1prot_L-elsbetiae_contig1243.1984.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1243 10022..16565 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1243.1984.1

>prot_L-elsbetiae_contig1243.1984.1 ID=prot_L-elsbetiae_contig1243.1984.1|Name=mRNA_L-elsbetiae_contig1243.1984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=428bp
MLATELLKRAALGTLLFCSGAQGQTQGFCEGELGEADWDCGSVATLPAQV
FDGQDELLPLPGTTDPLNPVLYRQISGSPMFDETGERRNAGGAAIYVLTS
GGYWCMLAESNGEAALFDAPEGGFVSSALEFPTGTWLSESIEAILAPSTK
LKYIVYTHSHWDHMGAAGLVYDHFAQDSPVIIASKRIRAALKDRDNRDPT
TVFGKYLDITAVFPLGNNRGVPIPEKLEAADYRELQVGNLRFELQKIHAH
ERGDLFVFLDKTIPENAAEGIGSSILMVVDTIFPGWIPFVSVAITHDVGS
YYEAMDIILAYDFDVLVAGHLSRMGTKADVQLNKDFYADVLEGAKIGFAT
VSPADIVAGTGVSDPANPNAGNTWLLFSELIERNTDVCVAYVLDAGSRGR
NWLAELGGVDLTLRSQCWAVISYLRVG*
back to top

mRNA from alignment at L-elsbetiae_contig1243:9539..16797-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1243.1984.1 ID=mRNA_L-elsbetiae_contig1243.1984.1|Name=mRNA_L-elsbetiae_contig1243.1984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7259bp|location=Sequence derived from alignment at L-elsbetiae_contig1243:9539..16797- (Laminarionema elsbetiae ELsaHSoW15)
GTAAGAAGAAAAAAAATAAGTTTGATGGATCCGGCAAGATCCAGAATGTC CACTATCTAGACTATCTAATTGGCGGGTACTTTTGCGGGAGGTTTTCGCG GGAGGTATGGTTTCCCACCCGCCTCCTTGTCCTGTGATCCCTTTGCCACT CCCCGCGTTGCACTCTCCCACTCAGACAACCTTCACAAAGAACTGAGCAA CGGGCGAACGTTCAACGCAGCATTTATAAAAAATGCTGGCCACAGAGTTG TTGAAGCGGGCTGCTCTGGGCACACTTTTGTTCTGTTCTGGCGCTCAAGG ACAAACCCAGGGTTTTTGCGAAGGGGAACTTGGAGAGGCTGACTGGGATT GTGGAAGTGTAGCAACCTTGCCAGCACAGGTAGGTGATCGAGTACAGAAA TATCGGTCCCACCCGCGCGATGTTGCTGCAGCTGTAAATTGCAGGCTTCG ACGTGCGCACATACATACAGTCTAGTCTACGTACGTATTTCCGCCGTACC TCACATTCCCGAGAATCCGGATCCTCGTTGCATTCGTGTTTGATCCGTGA GCATGGTCAACAACACGTTTCTTCCTCTCAATCAAAGGTCTTCGATGGTC AGGATGAGCTGCTGCCCCTCCCCGGAACCACGGACCCTCTGAACCCTGTG CTCTATCGACAAATCTCGGGGTCACCGATGTTCGATGAGACCGGTGAGCG GCGCAACGCCGGCGGGGCTGCTATCTACGTGCTGACATCGGGGGGTTACT GGTGCATGCTGGCGGAGAGCAACGGCGAGGCTGCCCTCTTCGACGCACCT GAAGGTATAGGATTTTCAAACTTCCGTACACGATACACTTGGGTTGAACG GCTCTCTTTGATTGCGCGCTGTGCAAAATCCAAGTCTAGATCTAGATTAG ACTAGACTATGTGTCTTATCTACATAGTCTACATATCTAGACTATCTAGC TAGTCTATATCTAGACTAGACTATATCTACATAGTCTAGACTATCTAGAT AGATACACGAGTTCTGCGAACGTTTGCCCGCCGCGATCTCGAGAATGATA TTCCTTCTCTATTAGATAGTCTAGATATAAATGTACCTCCATTTTTCAAC TAGGATGATGCTTGGAATCAGAAATAAATGTAAACGAAGCATTCATTGTG GACGGCTTTCGTCAACAAATCGGGGTTTCGTTGGCAGAGACGCCCAAGAT ATGCCTTTTCTTCACGGCATGGCTGTTGTGCCCGATGTTGGTGGAAATAT CAGCAACATGTTACAGTCGAGAAGCTTTTGCGCACGCTGTCTGCGGAAAG ATTCAGCAATGACCAGCAGCAGTAACTCGTGTTCGACACAGATAATCCCG GTGCGTACGTGTAGACCAGCCTGCCTCTATGCACCACCTTACGGTCCACA CTGCCCTACCTCCGTTTTGTTTTATGCAACAGGGGGTTTTGTTTCAAGCG CTTTGGAGTTTCCCACGGGCACGTGGCTGTCCGAATCTATCGAGGCGATC CTCGCTCCGAGCACCAAGCTCAAGTATATCGTCTACACCCACTCCCATTG GGTGAGACGCATACTTTCCGCCCTCTCCCCCCTCGTAAAAAATATAGGAG TAGTCTAGTCTATAGATATAACCTTCAGTGTCGCGATGTTTATGTTTCCC TGCACGCACATGATGGACGAACGCAGTGTTTTGTCTTGTGCGTTACAACT CAGTACATCCGGTGGACATATAGCCGTCTGTGCAGTCCGTCCGGTCGGTG CCCAGTCATGAAAAAATAACCATCTCATCTCATACATGGAAATAAATAGT TATTCATTTTGGATGGGCAAGGGAGCAAAAATATGGGCTCTAGATATGTC CATCTAGACTATCTGTACGTCTCCTGCTGAGGATGTCCGGAGGCTTCCCA CCGTCATTTCAAGGTTCCCTTGCTATTCTCAACGGTGTTGACAGGACCAC ATGGGCGCTGCGGGCCTTGTTTACGATCACTTCGCGCAAGACAGCCCCGT CATCATCGCCTCCAAGCGCATCCGAGCCGCGCTCAAAGACCGAGACAACA GGGACCCCACCACCGTCTTCGGCAAGTATCTAGATATAACTGCTGTATTC CCTCTTGGTGTAATGTCTGAAGTATTAAAGTTTGTTCTTGGCGCGTGCTT TCATGCGTTTGATTAAGAAGTGGTCTTCTTGGGCTCTTTCGTCCTATTGT ATGTACACGGAGCGTCTGCCGACTTTGAAAAGTTTTCTGTATTATGGTTC GCAACAGTAGGTATGCCCAAGGGCCTAGCCCTAACTTTTACCATGGTCTA AACGGTTGCAGAGAGGTGAATACCAGTTACAGTCGTCCCAGGCGGTGACT ACATTCAATCCTAGAGTCGTGCACACATTTTTATTGTTGATTACAATGTC CACCGTGCCCGGTTTAAATTGTACACAGGCAACAACCGAGGAGTCCCCAT CCCTGAAAAGCTGGAAGCAGCCGACTACAGGGAGCTACAGGTGGGGAACC TACGTTTCGAGCTGCAGAAGATCCACGCGCACGAGAGGGGGGACTTGTTT GTGTTCCTGGACAAGACCATCCCAGAAAACGCAGCTGAAGGTTCGGACGG CAAGATAGGCAAACGGAACAAAGAGAGAGAGAGGGGGGGGGGGGTCGTCG GCTAGCACAAGAAACAGATCGCCCATGTCTGTCTATCTGTGTGCCATGAA CCTCTTGGCGCATGCAGTCGCTCTTGATGCCGTTGTTTTCTTTTATTGTG TCTCCGACTCTCGCGGCGTAACCTACACGAAAAGTAAGCCGAGGCCCGTT GTGATTGGTTTTCAATTTTACCTCTGCGAGCGCAACAAAGCCCATTATTT ATTAATAATACGAACCTCCTCACGCTAAGAAGCCTGCGTAGTTTTGCGAA ATGCTCGCTAAGACTAGCAGATGACTGACTCTCCCTTTCTGCCCCCCCCC CCCCTCCCGTAATGCTGTTGCTACCACTCACGGCGCGCAGGCATCGGAAG CAGCATTCTCATGGTTGTCGACACCATCTTCCCCGGTTGGTGAGACGACT GGTTGGGAGAGTAGGAACTGGCGCTCCAGACGAGTTGGGTGTTTTTTCCT TTGCGTGTCTCAATATTGTTTGAGGAACCAACGCACATGGTAGGCAGAGA GTAAGGATGCAGGGAAAAATGTGAAGTATGCCCGATTGGTGACGCCTGCC CCTGATAGGAACGGCGCTCCCTTCTCGGAAGAAATGCACGTCAAATGCCA AGCCTTTACGCGTGCAGTAGCAAAAACGAACACCCCTCCTCCGCGTCGCA TCCGAAGCTACCATTCCAACGAGCTTAATTGCCCTGCAAAAACAGCAAAT CCGTTGAGCGGTTTGTCAACCCGTGCTGTGGTGGCCCTTGTATTTGTTGC ATCATTTCAATGGAATAAATTTCACAGGAATCAACCGTGTTTAGCGCGCG CTCTCTCTCTCTCTCTTGTTTCTGTACTCGCACCACCGAGCCGTATCACT CATGTTTGTTTTGTTTGGTGTCTCATCGTATCATGTTACACAACGCGCTC CTTTCAATTCTTTGCAGGATTCCATTCGTTTCCGTTGCCATCACCCATGA TGTCGGCAGCTATTACGAAGCTATGGACATAATCCTGGGTGAGTGGGTGC GATCAGTCGCTGCGAGGGGTAGGCGGAAATTGGGTCGACTTCAGTCCCTT GCTCTTGAGATGACGTGCAATCTGATGCCCCAAAACAAAAATGATGCGTC ACAACCAACCAACCACGAATGTTGCTCGCAAGTTTCGTGACATGCCTCAC GTCAACAACGCATGGCCCACAAAGCATGAGGTTTCACGGAAGAACGTGCG TGCTCGGATCGCTCTCACACTGCATCATTGTCAATCGCGCAACCCTGCGC AGCCTACGACTTCGACGTGCTGGTCGCGGGACATCTATCACGCATGGGCA CGAAGGCGGACGTGCAGCTCAACAAGGATTTCTACGCTGATGTCCTCGAA GGTAGGTAGAACTATGGGGTATCATTGTCCACATTTGACCATGCGGATTG ATACCCAAGAGAGTTGACCGTTGGTTGCGTTTCGAAGGAGAGATTTTAAT ACTGCTGCTCTCGACTACTTGTAGGTGTGGCATGTACGTATGTAGCGAAT ACATACGTTGCAGAACAAATCGCTTTATTTCGAGCACTAGCATGTAGGTT TTGTCGTGTGGAGGCCTCACGTCTGTCTGTCCTACTACTCCTTCTTGCTG TTGGGTTTTGCTTTCAAGTGGTAGATAGAGCGCATGCGAAGTTAGTTGCG GTCCTACGACTAGACCCGCAGAGGTGTTTCGAATACTAGAGACTACGCAT TGTGAACAAAGGCTTTGGCTTACAGCAGATCGGTGTCAACGACAGCTTAC TAGCGACGATAGCGTCAGCGGCCGGCAGGTGTACACGTCCAAGCTCAGCA CGCGAAATGGATACATACATATCGCAATAATACCTCTATCGCCCGAACAG GTGCGAAGATCGGCTTCGCGACGGTGTCACCTGCCGACATTGTTGCAGGG ACAGGAGTTTCCGACCCCGCCAACCCCAACGCGGGCAACACCTGGTAAGG GCTGATGTACATGTACCCTCCTCGGGTCCGCATCGAGAGCCTCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCC CCCCTCCCACGGCATGCCTGTCCCGATGCAGCGTCCCAGTGGNNNNNNNN NNCCCCCCCCCCCCCCCCGGGGTGGCGCCTGTGGAGGGCGTGTGGACTGT GTCTCGCCCCGGGGGGCCCTCCCCATTCCCCCCCCCCCCCCCCCCCCCTC TCTCGCTTGCCCCCCTTCTTTTCTGGGCCCTTTTCCCCTTCGAGGCTTTA GGACTGGCTGCTGTCTACTTATGGTGTGGTATGCCTGTACCATTTGGCAT TTAAATACTTTTGTACAGTAGGGCGCAGAACAATAGGTTTCGCGATCTTA AGAGGGTAGGATAACGACTACGAAGAACGAGGATACGAAAACGTCTGCGG TCCATCAGCGCACGCACGCACGCACATAGATTCTACCCCGTGGAGATCAC GTTGGCCTTCCCCCATCGCTTTTTTTCCGGAGGGAGGGAGCGAAAGCGTC ATGCATGCTTGCAAACAGTCTCCAAGCAAGCGTGGTTGTCCCCTATCTAC TTCCACTTGACATCAGTTTATCGCCTCCAAGAGACCTTACTGCAGAATGA TGGCCCCCAACCAATCAATTCCAAGCATTGGTTTCAAATCGATTTCGGTC ACACACTCACTTTTTCAATTTTCTACAGATATACAGGGTAGGTAGTCTAG GACGTTCTGGTATCACACCGTAGCATGCTACAAAGACCGCTGTTACGTTT ATCATTCCACCATTTTAGTCGTCTCCCAAACCCGAGGAAGCCCACTTACC ATATACTCCTATCCATGATCCGAGATCGATCACTGACCATCTACTCGGGC TTGATAAGAAGAGAGGCGGAAATCAATCGCCAAATTGCTTGAAGTGGGTA TGCATGTATCTACAAGGCGGAAGAAATGTGGCCCCACATACTGTACGAGC GAAGTACTTCGTGTACGACGTATTCATTAACCTAATTATTGGGGGGGGAA AGTACCTGGAATTAGGAATTAGGCTATGACATGCATTAATAAAGGTTCAT TTGTATTTCTTTTGATTCCTTTGCTCCCCACGCGCGCTCTATCCGCCGTC TGTCTGCTGTCTACCACGACGATACCAGGCTTCTTTTCAGCGAGTTGATC GAGCGCAACACAGACGTGTGTGTGGCTTATGTGTTGGACGCCGGCTCCCG CGGCCGAAACTGGTTGGCCGAGCTAGGAGGGGTGGACCTCACGCTCCGGT CTCAGGTTCGTCACAACATATCGCAATATATTCTCCCCCCTCCCTCCTGT CATACCTCCCCCCCCAAACAAACCAAACAAAATGGGCGAAATGGGCACAA AAAAGTTGTTGCAACCCGGCTCGAGAAAAATAAATAAATACCAAGTACAA ATCTTCTCCCTATGACACGTGGTCTATACCTTCGAGAACCCTCGGAGGTT GGTTGCATTTGTTTGGGGAAAATACGTTCGTTCGCCCCCCCGGGAAAATG GAGCAGTTGTTGCCGTTGAGGCATGCAAATGTAAATGTTGGTGTTTTCGG TGTTGTTGTTGTAAAGAGTCATTTTATTGGTTTGGACATGTCAAGCCGCT GTGCGTGGAGAAATGGCTCACTCGCAAAACAAATGCATTCAGCCGCGAGT AGACAGCCTGCAGGTAGCACGAGTTTTGTTGCGTTTTCGGTAGTTTTGTG GCAATCGCCCCGGGACTTTTCGCCCTGGGTTTTTGTCTTCAGAAAACGAT AGGTGTCTCCCTAACTCTGTGTTGACCCGGGGGGGATCATTTTTACGAAG AAACGTTGCACCCCCTTGAGTGTAAACAGAGGATATTACGGTAGCCACTA CAAAGAAGATGTATGTTGTATGTAGCTAGATAACGTCTGATGATGATGCA CATAAAATAAAACATCGATTTTCCACTAGTTTCCCCCCCCGCGGAACGGG TCATTATTTAACTTGTAAGTGGTTATTTTTCTCTTTCAACATTGCGCCAC TCAGTCACTCTGTTAATCCTCACCCCCCCTTGCCCCCTCGTGTGCGCGCG CTTTCGCACTTTCTATGGCCCCTGACCCATTTCTGTGCAGTGCTGGGCTG TGATCTCTTATCTCCGCGTCGGCTGAACGAAGAGATGATGATCGATCGGA GAGTCTTTTGTCCAGTTGTATGTATAGGAGACAGGCAATGAATGGTGAAT GCGCATTAAGTCGTATAGTGTTAGTTCTTCACTTGCACCCTGGGCGAGTT TGTTGGGTAGCCGAGAAAATATTGTCTCGTGGAGAAACTAGGTCGGGGGC AGAATTAGTAGTATGTATCTAGGATAGGAACAGCTCCGGCGTTTGTTCAG CACATACATATGTACATTGTAGTTTGATGGTTGTGGTTTCGGGCGTTGTG CTCCAGCGAATCAAATCTACCTCATCGTGGACCGTACATAGTACATGCAC GATATGTTGTTTTCTTTTGGGTCATTGGAAGACACAGATATTTGTCGCTC GTGACACCGGAATGGTATGCGATATACTTATAGTATGGTATAACCGTAAG TTACGAACTTCTTTTTGTTTGTGGGGAGTTTTTTTTTTTTTTTCTGAAAC CAACCCCCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1243:9539..16797-

>mRNA_L-elsbetiae_contig1243.1984.1 ID=mRNA_L-elsbetiae_contig1243.1984.1|Name=mRNA_L-elsbetiae_contig1243.1984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2568bp|location=Sequence derived from alignment at L-elsbetiae_contig1243:9539..16797- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGCCACAGAGTTGTTGAAGCGGGCTGCTCTGGGCACACTTTTGTT
CTGTTCTGGCGCTCAAGGACAAACCCAGGGTTTTTGCGAAGGGGAACTTG
GAGAGGCTGACTGGGATTGTGGAAGTGTAGCAACCTTGCCAGCACAGATG
CTGGCCACAGAGTTGTTGAAGCGGGCTGCTCTGGGCACACTTTTGTTCTG
TTCTGGCGCTCAAGGACAAACCCAGGGTTTTTGCGAAGGGGAACTTGGAG
AGGCTGACTGGGATTGTGGAAGTGTAGCAACCTTGCCAGCACAGGTCTTC
GATGGTCAGGATGAGCTGCTGCCCCTCCCCGGAACCACGGACCCTCTGAA
CCCTGTGCTCTATCGACAAATCTCGGGGTCACCGATGTTCGATGAGACCG
GTGAGCGGCGCAACGCCGGCGGGGCTGCTATCTACGTGCTGACATCGGGG
GGTTACTGGTGCATGCTGGCGGAGAGCAACGGCGAGGCTGCCCTCTTCGA
CGCACCTGAAGGTCTTCGATGGTCAGGATGAGCTGCTGCCCCTCCCCGGA
ACCACGGACCCTCTGAACCCTGTGCTCTATCGACAAATCTCGGGGTCACC
GATGTTCGATGAGACCGGTGAGCGGCGCAACGCCGGCGGGGCTGCTATCT
ACGTGCTGACATCGGGGGGTTACTGGTGCATGCTGGCGGAGAGCAACGGC
GAGGCTGCCCTCTTCGACGCACCTGAAGGGGGTTTTGTTTCAAGCGCTTT
GGAGTTTCCCACGGGCACGTGGCTGTCCGAATCTATCGAGGCGATCCTCG
CTCCGAGCACCAAGCTCAAGTATATCGTCTACACCCACTCCCATTGGGGG
GTTTTGTTTCAAGCGCTTTGGAGTTTCCCACGGGCACGTGGCTGTCCGAA
TCTATCGAGGCGATCCTCGCTCCGAGCACCAAGCTCAAGTATATCGTCTA
CACCCACTCCCATTGGGACCACATGGGCGCTGCGGGCCTTGTTTACGATC
ACTTCGCGCAAGACAGCCCCGTCATCATCGCCTCCAAGCGCATCCGAGCC
GCGCTCAAAGACCGAGACAACAGGGACCCCACCACCGTCTTCGGCAAGTA
TCTAGATATAACTGCTGTATTCCCTCTTGGACCACATGGGCGCTGCGGGC
CTTGTTTACGATCACTTCGCGCAAGACAGCCCCGTCATCATCGCCTCCAA
GCGCATCCGAGCCGCGCTCAAAGACCGAGACAACAGGGACCCCACCACCG
TCTTCGGCAAGTATCTAGATATAACTGCTGTATTCCCTCTTGGCAACAAC
CGAGGAGTCCCCATCCCTGAAAAGCTGGAAGCAGCCGACTACAGGGAGCT
ACAGGTGGGGAACCTACGTTTCGAGCTGCAGAAGATCCACGCGCACGAGA
GGGGGGACTTGTTTGTGTTCCTGGACAAGACCATCCCAGAAAACGCAGCT
GAAGGCAACAACCGAGGAGTCCCCATCCCTGAAAAGCTGGAAGCAGCCGA
CTACAGGGAGCTACAGGTGGGGAACCTACGTTTCGAGCTGCAGAAGATCC
ACGCGCACGAGAGGGGGGACTTGTTTGTGTTCCTGGACAAGACCATCCCA
GAAAACGCAGCTGAAGGCATCGGAAGCAGCATTCTCATGGTTGTCGACAC
CATCTTCCCCGGTTGGCATCGGAAGCAGCATTCTCATGGTTGTCGACACC
ATCTTCCCCGGTTGGATTCCATTCGTTTCCGTTGCCATCACCCATGATGT
CGGCAGCTATTACGAAGCTATGGACATAATCCTGGGATTCCATTCGTTTC
CGTTGCCATCACCCATGATGTCGGCAGCTATTACGAAGCTATGGACATAA
TCCTGGCCTACGACTTCGACGTGCTGGTCGCGGGACATCTATCACGCATG
GGCACGAAGGCGGACGTGCAGCTCAACAAGGATTTCTACGCTGATGTCCT
CGAAGCCTACGACTTCGACGTGCTGGTCGCGGGACATCTATCACGCATGG
GCACGAAGGCGGACGTGCAGCTCAACAAGGATTTCTACGCTGATGTCCTC
GAAGGTGCGAAGATCGGCTTCGCGACGGTGTCACCTGCCGACATTGTTGC
AGGGACAGGAGTTTCCGACCCCGCCAACCCCAACGCGGGCAACACCTGGT
GCGAAGATCGGCTTCGCGACGGTGTCACCTGCCGACATTGTTGCAGGGAC
AGGAGTTTCCGACCCCGCCAACCCCAACGCGGGCAACACCTGGCTTCTTT
TCAGCGAGTTGATCGAGCGCAACACAGACGTGTGTGTGGCTTATGTGTTG
GACGCCGGCTCCCGCGGCCGAAACTGGTTGGCCGAGCTAGGAGGGGTGGA
CCTCACGCTCCGGTCTCAGGCTTCTTTTCAGCGAGTTGATCGAGCGCAAC
ACAGACGTGTGTGTGGCTTATGTGTTGGACGCCGGCTCCCGCGGCCGAAA
CTGGTTGGCCGAGCTAGGAGGGGTGGACCTCACGCTCCGGTCTCAGTGCT
GGGCTGTGATCTCTTATCTCCGCGTCGGCTGATGCTGGGCTGTGATCTCT
TATCTCCGCGTCGGCTGA
back to top